2018-12-19T17:39:41.436Z,1545241181.436 [Supervisor](DEBUG): Initializing supervisor.
2018-12-19T17:39:41.439Z,1545241181.439 [SyncHandler](DEBUG): Created PCaller Thread at 404514E0
2018-12-19T17:39:41.440Z,1545241181.440 [SyncHandler](INFO): Protected caller Thread ID is 803
2018-12-19T17:39:41.441Z,1545241181.441 [ComponentRegistry](DEBUG): Component "controlThread" handled in its own thread.
2018-12-19T17:39:41.443Z,1545241181.443 [controlThread ThreadHandler](DEBUG): Created PCaller Thread at 404814E0
2018-12-19T17:39:41.444Z,1545241181.444 [controlThread ThreadHandler](INFO): Protected caller Thread ID is 804
2018-12-19T17:39:41.450Z,1545241181.450 [ComponentRegistry](DEBUG): SyncComponent "CycleStarter" handled in the control thread.
2018-12-19T17:39:41.464Z,1545241181.464 [ComponentRegistry](DEBUG): Component "CommandLine" handled in its own thread.
2018-12-19T17:39:41.465Z,1545241181.465 [CommandLine ThreadHandler](DEBUG): Created PCaller Thread at 404B14E0
2018-12-19T17:39:41.466Z,1545241181.466 [CommandLine ThreadHandler](INFO): Protected caller Thread ID is 805
2018-12-19T17:39:41.468Z,1545241181.468 [ComponentRegistry](DEBUG): Component "logger" handled in its own thread.
2018-12-19T17:39:41.470Z,1545241181.470 [logger ThreadHandler](DEBUG): Created PCaller Thread at 404E14E0
2018-12-19T17:39:41.471Z,1545241181.471 [logger ThreadHandler](INFO): Protected caller Thread ID is 806
2018-12-19T17:39:41.473Z,1545241181.473 [ComponentRegistry](DEBUG): SyncComponent "LogSplitter" handled in the control thread.
2018-12-19T17:39:41.473Z,1545241181.473 [Supervisor](INFO): Looking for Config files in directory: Config/
2018-12-19T17:39:41.477Z,1545241181.477 [Supervisor](INFO): Opening Config file at: Config/Sample.cfg
2018-12-19T17:39:41.597Z,1545241181.597 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Sample
2018-12-19T17:39:41.599Z,1545241181.599 [Supervisor](INFO): Opening Config file at: Config/workSite.cfg
2018-12-19T17:39:41.714Z,1545241181.714 [ComponentRegistry](DEBUG): Loaded Config Component "Config/workSite
2018-12-19T17:39:41.716Z,1545241181.716 [Supervisor](INFO): Opening Config file at: Config/logger.cfg
2018-12-19T17:39:41.947Z,1545241181.947 [ComponentRegistry](DEBUG): Loaded Config Component "Config/logger
2018-12-19T17:39:41.949Z,1545241181.949 [Supervisor](INFO): Opening Config file at: Config/Science.cfg
2018-12-19T17:39:42.389Z,1545241182.389 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Science
2018-12-19T17:39:42.390Z,1545241182.390 [Supervisor](INFO): Opening Config file at: Config/Control.cfg
2018-12-19T17:39:42.793Z,1545241182.793 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Control
2018-12-19T17:39:42.794Z,1545241182.794 [Supervisor](INFO): Opening Config file at: Config/Simulator.cfg
2018-12-19T17:39:43.325Z,1545241183.325 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Simulator
2018-12-19T17:39:43.327Z,1545241183.327 [Supervisor](INFO): Opening Config file at: Config/Sensor.cfg
2018-12-19T17:39:43.899Z,1545241183.899 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Sensor
2018-12-19T17:39:43.899Z,1545241183.899 [Supervisor](INFO): Opening Config file at: Config/vehicle.cfg
2018-12-19T17:39:44.455Z,1545241184.455 [ComponentRegistry](DEBUG): Loaded Config Component "Config/vehicle
2018-12-19T17:39:44.752Z,1545241184.752 [Supervisor](INFO): Opening Config file at: Config/Guidance.cfg
2018-12-19T17:39:45.039Z,1545241185.039 [Supervisor](INFO): Opening Config file at: Config/Servo.cfg
2018-12-19T17:39:45.454Z,1545241185.454 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Servo
2018-12-19T17:39:45.456Z,1545241185.456 [Supervisor](INFO): Opening Config file at: Config/Derivation.cfg
2018-12-19T17:39:45.656Z,1545241185.656 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Derivation
2018-12-19T17:39:45.656Z,1545241185.656 [Supervisor](INFO): Opening Config file at: Config/Navigation.cfg
2018-12-19T17:39:45.925Z,1545241185.925 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Navigation
2018-12-19T17:39:45.926Z,1545241185.926 [Supervisor](INFO): Opening Config file at: Config/BIT.cfg
2018-12-19T17:39:46.163Z,1545241186.163 [ComponentRegistry](DEBUG): Loaded Config Component "Config/BIT
2018-12-19T17:39:46.163Z,1545241186.163 [Supervisor](INFO): Opening Config file at: Config/secure.cfg
2018-12-19T17:39:46.300Z,1545241186.300 [ComponentRegistry](DEBUG): Loaded Config Component "Config/secure
2018-12-19T17:39:46.301Z,1545241186.301 [Supervisor](INFO): Opening Config file at: Config/Estimation.cfg
2018-12-19T17:39:46.468Z,1545241186.468 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Estimation
2018-12-19T17:39:46.470Z,1545241186.470 [Supervisor](INFO): Looking for Config files in directory: Config/lrauv-makai/
2018-12-19T17:39:46.472Z,1545241186.472 [Supervisor](INFO): Opening Config file at: Config/lrauv-makai/Battery.cfg
2018-12-19T17:39:46.756Z,1545241186.756 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Battery
2018-12-19T17:39:46.758Z,1545241186.758 [Supervisor](INFO): Opening Config file at: Config/lrauv-makai/logger.cfg
2018-12-19T17:39:46.891Z,1545241186.891 [Supervisor](INFO): Opening Config file at: Config/lrauv-makai/Science.cfg
2018-12-19T17:39:47.096Z,1545241187.096 [Supervisor](INFO): Opening Config file at: Config/lrauv-makai/Control.cfg
2018-12-19T17:39:47.206Z,1545241187.206 [Supervisor](INFO): Opening Config file at: Config/lrauv-makai/Simulator.cfg
2018-12-19T17:39:47.301Z,1545241187.301 [Supervisor](INFO): Opening Config file at: Config/lrauv-makai/Sensor.cfg
2018-12-19T17:39:47.485Z,1545241187.485 [Supervisor](INFO): Opening Config file at: Config/lrauv-makai/vehicle.cfg
2018-12-19T17:39:47.700Z,1545241187.700 [Supervisor](INFO): Opening Config file at: Config/lrauv-makai/Servo.cfg
2018-12-19T17:39:47.801Z,1545241187.801 [Supervisor](INFO): Opening Config file at: Config/lrauv-makai/Navigation.cfg
2018-12-19T17:39:47.899Z,1545241187.899 [Supervisor](INFO): Opening Config file at: Config/lrauv-makai/BIT.cfg
2018-12-19T17:39:47.999Z,1545241187.999 [Supervisor](INFO): Opening Config file at: Config/lrauv-makai/secure.cfg
2018-12-19T17:39:48.084Z,1545241188.084 [Supervisor](IMPORTANT): Reading configuration overrides from Data/persisted.cfg
2018-12-19T17:39:48.093Z,1545241188.093 [Module Loader](DEBUG): Loading Module at Modules/Simulator.so
2018-12-19T17:39:48.228Z,1545241188.228 [Module Loader](DEBUG): Loaded Module: Simulator (This is the module containing the Simulator)
2018-12-19T17:39:48.229Z,1545241188.229 [Module Loader](DEBUG): Loading Module at Modules/Sample.so
2018-12-19T17:39:48.252Z,1545241188.252 [Module Loader](DEBUG): Loaded Module: Sample (This is a Sample Module of Sample Components)
2018-12-19T17:39:48.253Z,1545241188.253 [Module Loader](DEBUG): Loading Module at Modules/Derivation.so
2018-12-19T17:39:48.310Z,1545241188.310 [DepthRateCalculator] Loaded
2018-12-19T17:39:48.310Z,1545241188.310 [ComponentRegistry](DEBUG): SyncComponent "DepthRateCalculator" handled in the control thread.
2018-12-19T17:39:48.316Z,1545241188.316 [PitchRateCalculator] Loaded
2018-12-19T17:39:48.317Z,1545241188.317 [ComponentRegistry](DEBUG): SyncComponent "PitchRateCalculator" handled in the control thread.
2018-12-19T17:39:48.333Z,1545241188.333 [SpeedCalculator] Loaded
2018-12-19T17:39:48.333Z,1545241188.333 [ComponentRegistry](DEBUG): SyncComponent "SpeedCalculator" handled in the control thread.
2018-12-19T17:39:48.354Z,1545241188.354 [TempGradientCalculator] Loaded
2018-12-19T17:39:48.355Z,1545241188.355 [ComponentRegistry](DEBUG): SyncComponent "TempGradientCalculator" handled in the control thread.
2018-12-19T17:39:48.361Z,1545241188.361 [YawRateCalculator] Loaded
2018-12-19T17:39:48.361Z,1545241188.361 [ComponentRegistry](DEBUG): SyncComponent "YawRateCalculator" handled in the control thread.
2018-12-19T17:39:48.401Z,1545241188.401 [ElevatorOffsetCalculator] Loaded
2018-12-19T17:39:48.402Z,1545241188.402 [ComponentRegistry](DEBUG): SyncComponent "ElevatorOffsetCalculator" handled in the control thread.
2018-12-19T17:39:48.402Z,1545241188.402 [Module Loader](DEBUG): Loaded Module: Derivation (Contains the base derivation components)
2018-12-19T17:39:48.403Z,1545241188.403 [Module Loader](DEBUG): Loading Module at Modules/Trigger.so
2018-12-19T17:39:48.444Z,1545241188.444 [Module Loader](DEBUG): Loaded Module: Trigger (Contains triggers for use in missions)
2018-12-19T17:39:48.445Z,1545241188.445 [Module Loader](DEBUG): Loading Module at Modules/Sensor.so
2018-12-19T17:39:48.618Z,1545241188.618 [Module Loader](ERROR): Cannot load library: libboost_system.so.1.63.0: cannot open shared object file: No such file or directory
2018-12-19T17:39:48.618Z,1545241188.618 [Module Loader](ERROR): Could not load the module at Modules/Sensor.so
2018-12-19T17:39:48.620Z,1545241188.620 [Module Loader](DEBUG): Loading Module at Modules/BIT.so
2018-12-19T17:39:48.787Z,1545241188.787 [SBIT](DEBUG): Construct Startup Built In Test.
2018-12-19T17:39:48.813Z,1545241188.813 [SBIT] Loaded
2018-12-19T17:39:48.813Z,1545241188.813 [ComponentRegistry](DEBUG): SyncComponent "SBIT" handled in the control thread.
2018-12-19T17:39:48.814Z,1545241188.814 [IBIT](DEBUG): Construct Initiated Built In Test.
2018-12-19T17:39:48.843Z,1545241188.843 [IBIT] Loaded
2018-12-19T17:39:48.843Z,1545241188.843 [ComponentRegistry](DEBUG): SyncComponent "IBIT" handled in the control thread.
2018-12-19T17:39:48.846Z,1545241188.846 [CBIT](DEBUG): Construct Continuous Built In Test.
2018-12-19T17:39:49.242Z,1545241189.242 [CBIT] Loaded
2018-12-19T17:39:49.242Z,1545241189.242 [ComponentRegistry](DEBUG): SyncComponent "CBIT" handled in the control thread.
2018-12-19T17:39:49.243Z,1545241189.243 [Module Loader](DEBUG): Loaded Module: BIT (Contains the BuiltInTest components, such as C Built In Test)
2018-12-19T17:39:49.244Z,1545241189.244 [Module Loader](DEBUG): Loading Module at Modules/Science.so
2018-12-19T17:39:49.841Z,1545241189.841 [CTD_Seabird] Loaded
2018-12-19T17:39:49.841Z,1545241189.841 [ComponentRegistry](DEBUG): Component "CTD_Seabird" handled in its own thread.
2018-12-19T17:39:49.842Z,1545241189.842 [CTD_Seabird ThreadHandler](DEBUG): Created PCaller Thread at 4064D4E0
2018-12-19T17:39:49.842Z,1545241189.842 [CTD_Seabird ThreadHandler](INFO): Protected caller Thread ID is 885
2018-12-19T17:39:49.860Z,1545241189.860 [ESPComponent] Loaded
2018-12-19T17:39:49.860Z,1545241189.860 [ComponentRegistry](DEBUG): SyncComponent "ESPComponent" handled in the control thread.
2018-12-19T17:39:49.874Z,1545241189.874 [PAR_Licor] Loaded
2018-12-19T17:39:49.875Z,1545241189.875 [ComponentRegistry](DEBUG): SyncComponent "PAR_Licor" handled in the control thread.
2018-12-19T17:39:50.024Z,1545241190.024 [WetLabsBB2FL] Loaded
2018-12-19T17:39:50.024Z,1545241190.024 [ComponentRegistry](DEBUG): Component "WetLabsBB2FL" handled in its own thread.
2018-12-19T17:39:50.025Z,1545241190.025 [WetLabsBB2FL ThreadHandler](DEBUG): Created PCaller Thread at 4067D4E0
2018-12-19T17:39:50.025Z,1545241190.025 [WetLabsBB2FL ThreadHandler](INFO): Protected caller Thread ID is 886
2018-12-19T17:39:50.026Z,1545241190.026 [Module Loader](DEBUG): Loaded Module: Science (Contains the science components)
2018-12-19T17:39:50.027Z,1545241190.027 [Module Loader](DEBUG): Loading Module at Modules/Guidance.so
2018-12-19T17:39:50.319Z,1545241190.319 [Module Loader](DEBUG): Loaded Module: Guidance (Contains behaviors and commands)
2018-12-19T17:39:50.320Z,1545241190.320 [Module Loader](DEBUG): Loading Module at Modules/Control.so
2018-12-19T17:39:50.408Z,1545241190.408 [VerticalControl](DEBUG): Construct VerticalControl.
2018-12-19T17:39:50.503Z,1545241190.503 [VerticalControl] Loaded
2018-12-19T17:39:50.504Z,1545241190.504 [ComponentRegistry](DEBUG): SyncComponent "VerticalControl" handled in the control thread.
2018-12-19T17:39:50.504Z,1545241190.504 [HorizontalControl](DEBUG): Construct HorizontalControl.
2018-12-19T17:39:50.566Z,1545241190.566 [HorizontalControl] Loaded
2018-12-19T17:39:50.566Z,1545241190.566 [ComponentRegistry](DEBUG): SyncComponent "HorizontalControl" handled in the control thread.
2018-12-19T17:39:50.567Z,1545241190.567 [SpeedControl](DEBUG): Construct SpeedControl.
2018-12-19T17:39:50.572Z,1545241190.572 [SpeedControl] Loaded
2018-12-19T17:39:50.573Z,1545241190.573 [ComponentRegistry](DEBUG): SyncComponent "SpeedControl" handled in the control thread.
2018-12-19T17:39:50.573Z,1545241190.573 [LoopControl](DEBUG): Construct LoopControl.
2018-12-19T17:39:50.574Z,1545241190.574 [LoopControl] Loaded
2018-12-19T17:39:50.574Z,1545241190.574 [ComponentRegistry](DEBUG): SyncComponent "LoopControl" handled in the control thread.
2018-12-19T17:39:50.575Z,1545241190.575 [Module Loader](DEBUG): Loaded Module: Control (Contains the Control components, such as Depth, Heading, and Speed Control)
2018-12-19T17:39:50.575Z,1545241190.575 [Module Loader](DEBUG): Loading Module at Modules/Estimation.so
2018-12-19T17:39:50.679Z,1545241190.679 [Module Loader](DEBUG): Loaded Module: Estimation (Contains the base estimation components)
2018-12-19T17:39:50.680Z,1545241190.680 [Module Loader](DEBUG): Loading Module at Modules/Servo.so
2018-12-19T17:39:50.801Z,1545241190.801 [BuoyancyServo] Loaded
2018-12-19T17:39:50.801Z,1545241190.801 [ComponentRegistry](DEBUG): SyncComponent "BuoyancyServo" handled in the control thread.
2018-12-19T17:39:50.813Z,1545241190.813 [ElevatorServo] Loaded
2018-12-19T17:39:50.813Z,1545241190.813 [ComponentRegistry](DEBUG): SyncComponent "ElevatorServo" handled in the control thread.
2018-12-19T17:39:50.825Z,1545241190.825 [MassServo] Loaded
2018-12-19T17:39:50.825Z,1545241190.825 [ComponentRegistry](DEBUG): SyncComponent "MassServo" handled in the control thread.
2018-12-19T17:39:50.836Z,1545241190.836 [RudderServo] Loaded
2018-12-19T17:39:50.837Z,1545241190.837 [ComponentRegistry](DEBUG): SyncComponent "RudderServo" handled in the control thread.
2018-12-19T17:39:50.848Z,1545241190.848 [ThrusterServo] Loaded
2018-12-19T17:39:50.848Z,1545241190.848 [ComponentRegistry](DEBUG): SyncComponent "ThrusterServo" handled in the control thread.
2018-12-19T17:39:50.848Z,1545241190.848 [Module Loader](DEBUG): Loaded Module: Servo (This is the module containing motor controllers)
2018-12-19T17:39:50.849Z,1545241190.849 [Module Loader](DEBUG): Loading Module at Modules/Navigation.so
2018-12-19T17:39:50.965Z,1545241190.965 [DeadReckonUsingSpeedCalculator] Loaded
2018-12-19T17:39:50.965Z,1545241190.965 [ComponentRegistry](DEBUG): SyncComponent "DeadReckonUsingSpeedCalculator" handled in the control thread.
2018-12-19T17:39:50.982Z,1545241190.982 [NavChart] Loaded
2018-12-19T17:39:50.982Z,1545241190.982 [ComponentRegistry](DEBUG): SyncComponent "NavChart" handled in the control thread.
2018-12-19T17:39:50.986Z,1545241190.986 [UniversalFixResidualReporter] Loaded
2018-12-19T17:39:50.986Z,1545241190.986 [ComponentRegistry](DEBUG): SyncComponent "UniversalFixResidualReporter" handled in the control thread.
2018-12-19T17:39:50.987Z,1545241190.987 [Module Loader](DEBUG): Loaded Module: Navigation (Contains the base navigation components)
2018-12-19T17:39:50.990Z,1545241190.990 [ComponentRegistry](DEBUG): SyncComponent "MissionManager" handled in the control thread.
2018-12-19T17:39:50.991Z,1545241190.991 [ComponentRegistry](DEBUG): SyncComponent "Reporter" handled in the control thread.
2018-12-19T17:39:50.998Z,1545241190.998 [ComponentRegistry](DEBUG): Component "NavChartDb" handled in its own thread.
2018-12-19T17:39:50.999Z,1545241190.999 [NavChartDb ThreadHandler](DEBUG): Created PCaller Thread at 407D74E0
2018-12-19T17:39:50.999Z,1545241190.999 [NavChartDb ThreadHandler](INFO): Protected caller Thread ID is 887
2018-12-19T17:39:51.004Z,1545241191.004 [Supervisor](INFO): Main Thread ID is 799
2018-12-19T17:39:51.004Z,1545241191.004 [Supervisor](DEBUG): Running supervisor.
2018-12-19T17:39:51.004Z,1545241191.004 [CommandLine ThreadHandler](INFO): Handler Thread ID is 888
2018-12-19T17:39:51.007Z,1545241191.007 [controlThread ThreadHandler](INFO): Handler Thread ID is 889
2018-12-19T17:39:51.007Z,1545241191.007 [controlThread](DEBUG): Initializing ControlThread
2018-12-19T17:39:51.008Z,1545241191.008 [DepthRateCalculator](DEBUG): Initializing DepthRateCalculator.
2018-12-19T17:39:51.008Z,1545241191.008 [PitchRateCalculator](DEBUG): Initializing PitchRateCalculator.
2018-12-19T17:39:51.008Z,1545241191.008 [SpeedCalculator](DEBUG): Initializing SpeedCalculator.
2018-12-19T17:39:51.009Z,1545241191.009 [TempGradientCalculator](DEBUG): Initializing TempGradientCalculator.
2018-12-19T17:39:51.009Z,1545241191.009 [YawRateCalculator](DEBUG): Initializing YawRateCalculator.
2018-12-19T17:39:51.010Z,1545241191.010 [ElevatorOffsetCalculator](DEBUG): Initializing ElevatorOffsetCalculator.
2018-12-19T17:39:51.010Z,1545241191.010 [SBIT](INFO): Initialize SBIT Component.
2018-12-19T17:39:51.011Z,1545241191.011 [SBIT](IMPORTANT): git: 2018-12-13
2018-12-19T17:39:51.011Z,1545241191.011 [SBIT](INFO): git hash: 8200dc43e6ef01082c531ff0fab84136a371dc2d
2018-12-19T17:39:51.011Z,1545241191.011 [SBIT](IMPORTANT): Kernel Release: 2.6.27.8
2018-12-19T17:39:51.012Z,1545241191.012 [SBIT](INFO): Kernel Reporting Different Version From Configuration.
Kernel Expected: #2 PREEMPT Thu Jan 11 20:13:48 PST 2018
Kernel Reported: #7 PREEMPT Mon Dec 17 14:09:40 PST 2018
2018-12-19T17:39:51.014Z,1545241191.014 [SBIT](INFO): Beginning SBIT in 24.000000 seconds.
2018-12-19T17:39:51.014Z,1545241191.014 [IBIT](INFO): Initialize IBIT Component.
2018-12-19T17:39:51.015Z,1545241191.015 [CBIT](DEBUG): Initialize CBIT Component.
2018-12-19T17:39:51.016Z,1545241191.016 [logger ThreadHandler](INFO): Handler Thread ID is 890
2018-12-19T17:39:51.026Z,1545241191.026 [CBIT](DEBUG): Initialized mux pins.
2018-12-19T17:39:51.026Z,1545241191.026 [CBIT](DEBUG): Initializing the watchdog timer.
2018-12-19T17:39:51.035Z,1545241191.035 [CTD_Seabird ThreadHandler](INFO): Handler Thread ID is 891
2018-12-19T17:39:51.035Z,1545241191.035 [CTD_Seabird](DEBUG): Initializing CTD_Seabird.
2018-12-19T17:39:51.039Z,1545241191.039 [CTD_Seabird](INFO): Opening uart, block timeout 10ths=20
2018-12-19T17:39:51.040Z,1545241191.040 [WetLabsBB2FL ThreadHandler](INFO): Handler Thread ID is 893
2018-12-19T17:39:51.041Z,1545241191.041 [WetLabsBB2FL](INFO): Powering down
2018-12-19T17:39:51.056Z,1545241191.056 [CBIT](INFO): Last reboot was NOT due to watchdog timer.
2018-12-19T17:39:51.056Z,1545241191.056 [CBIT](DEBUG): Initializing heartbeat.
2018-12-19T17:39:51.099Z,1545241191.099 [NavChartDb ThreadHandler](INFO): Handler Thread ID is 894
2018-12-19T17:39:51.108Z,1545241191.108 [NavChartDb](INFO): Looking for Electronic Nav Chart file at: Resources/ElectronicNavigationCharts/US1WC07M.000
2018-12-19T17:39:51.109Z,1545241191.109 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US1WC07M.000
2018-12-19T17:39:51.109Z,1545241191.109 [NavChartDb](INFO): Looking for Electronic Nav Chart file at: Resources/ElectronicNavigationCharts/US2WC11M.000
2018-12-19T17:39:51.109Z,1545241191.109 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US2WC11M.000
2018-12-19T17:39:51.109Z,1545241191.109 [NavChartDb](INFO): Looking for Electronic Nav Chart file at: Resources/ElectronicNavigationCharts/US3CA52M.000
2018-12-19T17:39:51.109Z,1545241191.109 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US3CA52M.000
2018-12-19T17:39:51.110Z,1545241191.110 [NavChartDb](INFO): Looking for Electronic Nav Chart file at: Resources/ElectronicNavigationCharts/US4CA60M.000
2018-12-19T17:39:51.110Z,1545241191.110 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US4CA60M.000
2018-12-19T17:39:51.110Z,1545241191.110 [NavChartDb](INFO): Looking for Electronic Nav Chart file at: Resources/ElectronicNavigationCharts/US5CA50M.000
2018-12-19T17:39:51.111Z,1545241191.111 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA50M.000
2018-12-19T17:39:51.111Z,1545241191.111 [NavChartDb](INFO): Looking for Electronic Nav Chart file at: Resources/ElectronicNavigationCharts/US5CA61M.000
2018-12-19T17:39:51.111Z,1545241191.111 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA61M.000
2018-12-19T17:39:51.111Z,1545241191.111 [NavChartDb](INFO): Looking for Electronic Nav Chart file at: Resources/ElectronicNavigationCharts/US5CA62M.000
2018-12-19T17:39:51.112Z,1545241191.112 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA62M.000
2018-12-19T17:39:51.112Z,1545241191.112 [NavChartDb](INFO): Looking for Electronic Nav Chart file at: Resources/ElectronicNavigationCharts/US5CA83M.000
2018-12-19T17:39:51.112Z,1545241191.112 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA83M.000
2018-12-19T17:39:51.126Z,1545241191.126 [CBIT](DEBUG): Deactivating GF circuits.
2018-12-19T17:39:51.126Z,1545241191.126 [CBIT](DEBUG): Deactivating emergency mode.
2018-12-19T17:39:51.167Z,1545241191.167 [VerticalControl](DEBUG): Initialize VerticalControlComponent.
2018-12-19T17:39:51.168Z,1545241191.168 [HorizontalControl](DEBUG): Initialize HorizontalControlComponent.
2018-12-19T17:39:51.169Z,1545241191.169 [SpeedControl](DEBUG): Initialize SpeedControlComponent.
2018-12-19T17:39:51.169Z,1545241191.169 [LoopControl](DEBUG): Initialize LoopControlComponent.
2018-12-19T17:39:51.171Z,1545241191.171 [DeadReckonUsingSpeedCalculator](DEBUG): Initializing DeadReckonUsingSpeedCalculator component.
2018-12-19T17:39:51.172Z,1545241191.172 [DeadReckonUsingSpeedCalculator](INFO): Will consider orientation measurement stale after 120s.
2018-12-19T17:39:51.172Z,1545241191.172 [DeadReckonUsingSpeedCalculator](INFO): Will consider velocity measurement stale after 20s.
2018-12-19T17:39:51.173Z,1545241191.173 [NavChart](DEBUG): Initialize NavChart Navigation.
2018-12-19T17:39:51.173Z,1545241191.173 [UniversalFixResidualReporter](DEBUG): Initializing UniversalFixResidualReporter component.
2018-12-19T17:39:51.174Z,1545241191.174 [MissionManager](INFO): Loading Mission: Missions/Startup.xml
2018-12-19T17:39:51.216Z,1545241191.216 [Startup:A.GoToSurface](DEBUG): Construct GoToSurface.
2018-12-19T17:39:51.270Z,1545241191.270 [MissionManager](DEBUG): 
<?xml version="1.0" encoding="UTF-8"?>
<Mission xmlns="Tethys"
       xmlns:Control="Tethys/Control"
       xmlns:Guidance="Tethys/Guidance" 
       xmlns:Units="Tethys/Units"
       xmlns:Universal="Tethys/Universal"
       xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
       xsi:schemaLocation="Tethys http://okeanids.mbari.org/tethys/Xml/Tethys.xsd
                           Tethys/Control http://okeanids.mbari.org/tethys/Xml/Control.xsd
                           Tethys/Guidance http://okeanids.mbari.org/tethys/Xml/Guidance.xsd
                           Tethys/Units http://okeanids.mbari.org/tethys/Xml/Units.xsd
                           Tethys/Universal http://okeanids.mbari.org/tethys/Xml/Universal.xsd"
       Id="Startup">

    <Guidance:GoToSurface>
        <Progression/>
    </Guidance:GoToSurface>

    <Aggregate Id="StartupSatComms">

        <Sequence/>

        <ReadDatum>
            <Timeout Duration="P1M" />
            <Universal:latitude_fix/>
        </ReadDatum>

        <ReadDatum>
            <Timeout Duration="P1M" />
            <Universal:platform_communications/>
        </ReadDatum>

    </Aggregate>

</Mission>


2018-12-19T17:39:51.270Z,1545241191.270 [MissionManager](INFO): Loading Mission: Missions/Default.xml
2018-12-19T17:39:51.362Z,1545241191.362 [MissionManager](INFO): DefineArg Default.ElapsedSinceDefaultStarted = 0.000000 min
2018-12-19T17:39:51.391Z,1545241191.391 [Default:A.Wait](DEBUG): Construct Wait.
2018-12-19T17:39:51.393Z,1545241191.393 [Default:B.GoToSurface](DEBUG): Construct GoToSurface.
2018-12-19T17:39:51.420Z,1545241191.420 [Default:CheckIn:Read_Iridium:A_Timeout:A.Execute](DEBUG): Construct Execute.
2018-12-19T17:39:51.455Z,1545241191.455 [Default:CheckIn:C.Wait](DEBUG): Construct Wait.
2018-12-19T17:39:51.460Z,1545241191.460 [Default:E.Execute](DEBUG): Construct Execute.
2018-12-19T17:39:51.492Z,1545241191.492 [MissionManager](DEBUG): 
<?xml version="1.0" encoding="UTF-8"?>
<Mission xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
         xmlns="Tethys"
         xmlns:Units="Tethys/Units"
         xmlns:Guidance="Tethys/Guidance"
         xmlns:Universal="Tethys/Universal"
         xsi:schemaLocation="Tethys http://okeanids.mbari.org/tethys/Xml/Tethys.xsd
                             Tethys/Units http://okeanids.mbari.org/tethys/Xml/Units.xsd
                             Tethys/Guidance http://okeanids.mbari.org/tethys/Xml/Guidance.xsd
                             Tethys/Universal http://okeanids.mbari.org/tethys/Xml/Universal.xsd"
         Id="Default">

    <DefineArg Name="ElapsedSinceDefaultStarted"><Units:minute/><Value>0</Value></DefineArg>

    <Guidance:Wait>
        <Description>
            Wait a moment to see if the scheduler starts a new mission before
            starting to actually run Default.
        </Description>
        <Sequence/>
        <Setting><Guidance:Wait.duration/><Units:second/><Value>13</Value></Setting>
    </Guidance:Wait>

    <Guidance:GoToSurface>
        <Progression/>
    </Guidance:GoToSurface>

    <Aggregate Id="CheckIn">

        <Sequence Repeat="288"/>

        <ReadDatum Id="Read_GPS">
            <Timeout Duration="P5M"/>
            <Universal:time_fix/>
        </ReadDatum>

        <ReadDatum Id="Read_Iridium">
            <Timeout Duration="P2H">
                <Guidance:Execute>
                    <Sequence/>
                    <Setting><Guidance:Execute.command/><String>Burn on</String></Setting>
                </Guidance:Execute>
                <Syslog Severity="Critical">Dropped weight due to communications timeout.</Syslog>
            </Timeout>
            <Universal:platform_communications/>
        </ReadDatum>

        <Guidance:Wait>
            <Sequence/>
            <Setting><Guidance:Wait.duration/><Units:minute/><Value>5</Value></Setting>
        </Guidance:Wait>

        <Assign><Sequence/><Arg Name="ElapsedSinceDefaultStarted"/><Elapsed><Universal:mission_started/></Elapsed></Assign>

        <Syslog Severity="Important">Default mission has been running for <Arg Name="ElapsedSinceDefaultStarted"/><Units:minute/></Syslog>

    </Aggregate>

    <Syslog Severity="Important">Restarting logs and Default mission.</Syslog>

    <Guidance:Execute>
        <Sequence/>
        <Setting><Guidance:Execute.command/><String>restart logs</String></Setting>
    </Guidance:Execute>

</Mission>


2018-12-19T17:39:51.498Z,1545241191.498 [controlThread](DEBUG): Component order: CycleStarter,ESPComponent,PAR_Licor,PAR_Licor,DepthRateCalculator,PitchRateCalculator,SpeedCalculator,TempGradientCalculator,YawRateCalculator,ElevatorOffsetCalculator,DeadReckonUsingSpeedCalculator,NavChart,UniversalFixResidualReporter,MissionManager,VerticalControl,HorizontalControl,SpeedControl,LoopControl,BuoyancyServo,ElevatorServo,MassServo,RudderServo,ThrusterServo,SBIT,IBIT,CBIT,Reporter,LogSplitter,
2018-12-19T17:39:51.522Z,1545241191.522 [ESPComponent](INFO): powering down ESP
2018-12-19T17:39:51.923Z,1545241191.923 [DepthRateCalculator](ERROR): Depth measurement is not active
2018-12-19T17:39:52.428Z,1545241192.428 [BuoyancyServo](DEBUG): Initializing EZServoServo.
2018-12-19T17:39:52.439Z,1545241192.439 [BuoyancyServo](DEBUG): Initializing BuoyancyServo.
2018-12-19T17:39:52.449Z,1545241192.449 [ElevatorServo](DEBUG): Initializing EZServoServo.
2018-12-19T17:39:52.471Z,1545241192.471 [ElevatorServo](DEBUG): Initializing ElevatorServo.
2018-12-19T17:39:52.476Z,1545241192.476 [MassServo](DEBUG): Initializing EZServoServo.
2018-12-19T17:39:52.487Z,1545241192.487 [MassServo](DEBUG): Initializing MassServo.
2018-12-19T17:39:52.500Z,1545241192.500 [RudderServo](DEBUG): Initializing EZServoServo.
2018-12-19T17:39:52.501Z,1545241192.501 [RudderServo](DEBUG): Initializing RudderServo.
2018-12-19T17:39:52.545Z,1545241192.545 [ThrusterServo](DEBUG): Initializing EZServoServo.
2018-12-19T17:39:52.551Z,1545241192.551 [ThrusterServo](DEBUG): Initializing ThrusterServo.
2018-12-19T17:39:52.800Z,1545241192.800 [DepthRateCalculator](ERROR): Depth measurement is not active
2018-12-19T17:39:53.075Z,1545241193.075 [DepthRateCalculator](ERROR): Depth measurement is not active
2018-12-19T17:39:53.414Z,1545241193.414 [BuoyancyServo](ERROR): Buoyancy initialization uart error serial timeout
2018-12-19T17:39:53.415Z,1545241193.415 [BuoyancyServo](FAULT): Buoyancy failed to initialize
2018-12-19T17:39:53.415Z,1545241193.415 [BuoyancyServo] Communications Fault, FailCount= 1
2018-12-19T17:39:53.415Z,1545241193.415 [BuoyancyServo](ERROR): Communications Fault
2018-12-19T17:39:53.638Z,1545241193.638 [CBIT](ERROR): Communications Fault in component: BuoyancyServo
2018-12-19T17:39:53.671Z,1545241193.671 [DepthRateCalculator](ERROR): Depth measurement is not active
2018-12-19T17:39:54.055Z,1545241194.055 [DepthRateCalculator](ERROR): Depth measurement is not active
2018-12-19T17:39:54.455Z,1545241194.455 [DepthRateCalculator](ERROR): Depth measurement is not active
2018-12-19T17:39:54.855Z,1545241194.855 [DepthRateCalculator](ERROR): Depth measurement is not active
2018-12-19T17:39:55.255Z,1545241195.255 [DepthRateCalculator](ERROR): Depth measurement is not active
2018-12-19T17:39:55.655Z,1545241195.655 [DepthRateCalculator](ERROR): Depth measurement is not active
2018-12-19T17:39:55.673Z,1545241195.673 [CBIT](INFO): Clearing failed state for component BuoyancyServo
2018-12-19T17:39:55.673Z,1545241195.673 [BuoyancyServo] No Fault, FailCount= 1
2018-12-19T17:39:56.055Z,1545241196.055 [DepthRateCalculator](ERROR): Depth measurement is not active
2018-12-19T17:39:56.467Z,1545241196.467 [DepthRateCalculator](ERROR): Depth measurement is not active
2018-12-19T17:39:56.879Z,1545241196.879 [DepthRateCalculator](ERROR): Depth measurement is not active
2018-12-19T17:39:57.267Z,1545241197.267 [DepthRateCalculator](ERROR): Depth measurement is not active
2018-12-19T17:39:57.667Z,1545241197.667 [DepthRateCalculator](ERROR): Depth measurement is not active
2018-12-19T17:39:57.684Z,1545241197.684 [BuoyancyServo](DEBUG): Initializing EZServoServo.
2018-12-19T17:39:57.803Z,1545241197.803 [BuoyancyServo](DEBUG): Initializing BuoyancyServo.
2018-12-19T17:39:58.067Z,1545241198.067 [DepthRateCalculator](ERROR): Depth measurement is not active
2018-12-19T17:39:58.467Z,1545241198.467 [DepthRateCalculator](ERROR): Depth measurement is not active
2018-12-19T17:39:58.867Z,1545241198.867 [DepthRateCalculator](ERROR): Depth measurement is not active
2018-12-19T17:39:59.267Z,1545241199.267 [DepthRateCalculator](ERROR): Depth measurement is not active
2018-12-19T17:39:59.667Z,1545241199.667 [DepthRateCalculator](ERROR): Depth measurement is not active
2018-12-19T17:40:00.067Z,1545241200.067 [DepthRateCalculator](ERROR): Depth measurement is not active
2018-12-19T17:40:00.467Z,1545241200.467 [DepthRateCalculator](ERROR): Depth measurement is not active
2018-12-19T17:40:00.867Z,1545241200.867 [DepthRateCalculator](ERROR): Depth measurement is not active
2018-12-19T17:40:01.291Z,1545241201.291 [DepthRateCalculator](ERROR): Depth measurement is not active
2018-12-19T17:40:01.347Z,1545241201.347 [CBIT](CRITICAL): Environmental Failure. Press:0.000000 PSI. Humidity:2143304%. Temp:3538824 C. ABORTING MISSION
2018-12-19T17:40:01.347Z,1545241201.347 [Supervisor](INFO): Stop Mission called by CBIT::monitorEnvironmentals
2018-12-19T17:40:01.667Z,1545241201.667 [DepthRateCalculator](ERROR): Depth measurement is not active
2018-12-19T17:40:01.701Z,1545241201.701 [CommandLine](FAULT): Scheduling is paused
2018-12-19T17:40:01.702Z,1545241201.702 [CBIT](INFO): Critical error at 20181219T174001
2018-12-19T17:40:02.067Z,1545241202.067 [DepthRateCalculator](ERROR): Depth measurement is not active
2018-12-19T17:40:02.467Z,1545241202.467 [DepthRateCalculator](ERROR): Depth measurement is not active
2018-12-19T17:40:02.867Z,1545241202.867 [DepthRateCalculator](ERROR): Depth measurement is not active
2018-12-19T17:40:03.267Z,1545241203.267 [DepthRateCalculator](ERROR): Depth measurement is not active
2018-12-19T17:40:03.667Z,1545241203.667 [DepthRateCalculator](ERROR): Depth measurement is not active
2018-12-19T17:40:04.067Z,1545241204.067 [DepthRateCalculator](ERROR): Depth measurement is not active
2018-12-19T17:40:04.467Z,1545241204.467 [DepthRateCalculator](ERROR): Depth measurement is not active
2018-12-19T17:40:04.867Z,1545241204.867 [DepthRateCalculator](ERROR): Depth measurement is not active
2018-12-19T17:40:05