2018-10-03T16:01:25.868Z,1538582485.868 [Supervisor](DEBUG): Initializing supervisor.
2018-10-03T16:01:25.870Z,1538582485.870 [SyncHandler](DEBUG): Created PCaller Thread at 404514E0
2018-10-03T16:01:25.871Z,1538582485.871 [SyncHandler](INFO): Protected caller Thread ID is 801
2018-10-03T16:01:25.871Z,1538582485.871 [ComponentRegistry](DEBUG): Component "controlThread" handled in its own thread.
2018-10-03T16:01:25.872Z,1538582485.872 [controlThread ThreadHandler](DEBUG): Created PCaller Thread at 404814E0
2018-10-03T16:01:25.873Z,1538582485.873 [controlThread ThreadHandler](INFO): Protected caller Thread ID is 802
2018-10-03T16:01:25.875Z,1538582485.875 [ComponentRegistry](DEBUG): SyncComponent "CycleStarter" handled in the control thread.
2018-10-03T16:01:25.887Z,1538582485.887 [ComponentRegistry](DEBUG): Component "CommandLine" handled in its own thread.
2018-10-03T16:01:25.888Z,1538582485.888 [CommandLine ThreadHandler](DEBUG): Created PCaller Thread at 404B14E0
2018-10-03T16:01:25.888Z,1538582485.888 [CommandLine ThreadHandler](INFO): Protected caller Thread ID is 803
2018-10-03T16:01:25.889Z,1538582485.889 [ComponentRegistry](DEBUG): Component "logger" handled in its own thread.
2018-10-03T16:01:25.890Z,1538582485.890 [logger ThreadHandler](DEBUG): Created PCaller Thread at 404E14E0
2018-10-03T16:01:25.890Z,1538582485.890 [logger ThreadHandler](INFO): Protected caller Thread ID is 804
2018-10-03T16:01:25.892Z,1538582485.892 [ComponentRegistry](DEBUG): SyncComponent "LogSplitter" handled in the control thread.
2018-10-03T16:01:25.893Z,1538582485.893 [Supervisor](INFO): Looking for Config files in directory: Config/
2018-10-03T16:01:25.897Z,1538582485.897 [Supervisor](INFO): Opening Config file at: Config/Sample.cfg
2018-10-03T16:01:26.047Z,1538582486.047 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Sample
2018-10-03T16:01:26.049Z,1538582486.049 [Supervisor](INFO): Opening Config file at: Config/workSite.cfg
2018-10-03T16:01:26.152Z,1538582486.152 [ComponentRegistry](DEBUG): Loaded Config Component "Config/workSite
2018-10-03T16:01:26.154Z,1538582486.154 [Supervisor](INFO): Opening Config file at: Config/logger.cfg
2018-10-03T16:01:26.364Z,1538582486.364 [ComponentRegistry](DEBUG): Loaded Config Component "Config/logger
2018-10-03T16:01:26.366Z,1538582486.366 [Supervisor](INFO): Opening Config file at: Config/Science.cfg
2018-10-03T16:01:26.713Z,1538582486.713 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Science
2018-10-03T16:01:26.713Z,1538582486.713 [Supervisor](INFO): Opening Config file at: Config/Control.cfg
2018-10-03T16:01:27.064Z,1538582487.064 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Control
2018-10-03T16:01:27.065Z,1538582487.065 [Supervisor](INFO): Opening Config file at: Config/Simulator.cfg
2018-10-03T16:01:27.541Z,1538582487.541 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Simulator
2018-10-03T16:01:27.542Z,1538582487.542 [Supervisor](INFO): Opening Config file at: Config/Sensor.cfg
2018-10-03T16:01:27.977Z,1538582487.977 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Sensor
2018-10-03T16:01:27.978Z,1538582487.978 [Supervisor](INFO): Opening Config file at: Config/vehicle.cfg
2018-10-03T16:01:28.466Z,1538582488.466 [ComponentRegistry](DEBUG): Loaded Config Component "Config/vehicle
2018-10-03T16:01:28.468Z,1538582488.468 [Supervisor](INFO): Opening Config file at: Config/Guidance.cfg
2018-10-03T16:01:28.552Z,1538582488.552 [Supervisor](INFO): Opening Config file at: Config/Servo.cfg
2018-10-03T16:01:28.872Z,1538582488.872 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Servo
2018-10-03T16:01:28.874Z,1538582488.874 [Supervisor](INFO): Opening Config file at: Config/Derivation.cfg
2018-10-03T16:01:29.024Z,1538582489.024 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Derivation
2018-10-03T16:01:29.025Z,1538582489.025 [Supervisor](INFO): Opening Config file at: Config/Navigation.cfg
2018-10-03T16:01:29.243Z,1538582489.243 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Navigation
2018-10-03T16:01:29.315Z,1538582489.315 [Supervisor](INFO): Opening Config file at: Config/BIT.cfg
2018-10-03T16:01:29.667Z,1538582489.667 [ComponentRegistry](DEBUG): Loaded Config Component "Config/BIT
2018-10-03T16:01:29.667Z,1538582489.667 [Supervisor](INFO): Opening Config file at: Config/secure.cfg
2018-10-03T16:01:30.086Z,1538582490.086 [ComponentRegistry](DEBUG): Loaded Config Component "Config/secure
2018-10-03T16:01:30.087Z,1538582490.087 [Supervisor](INFO): Opening Config file at: Config/Estimation.cfg
2018-10-03T16:01:30.233Z,1538582490.233 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Estimation
2018-10-03T16:01:30.235Z,1538582490.235 [Supervisor](INFO): Looking for Config files in directory: Config/lrauv-makai/
2018-10-03T16:01:30.237Z,1538582490.237 [Supervisor](INFO): Opening Config file at: Config/lrauv-makai/Battery.cfg
2018-10-03T16:01:30.472Z,1538582490.472 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Battery
2018-10-03T16:01:30.473Z,1538582490.473 [Supervisor](INFO): Opening Config file at: Config/lrauv-makai/logger.cfg
2018-10-03T16:01:30.581Z,1538582490.581 [Supervisor](INFO): Opening Config file at: Config/lrauv-makai/Science.cfg
2018-10-03T16:01:30.728Z,1538582490.728 [Supervisor](INFO): Opening Config file at: Config/lrauv-makai/Control.cfg
2018-10-03T16:01:30.823Z,1538582490.823 [Supervisor](INFO): Opening Config file at: Config/lrauv-makai/Simulator.cfg
2018-10-03T16:01:30.910Z,1538582490.910 [Supervisor](INFO): Opening Config file at: Config/lrauv-makai/Sensor.cfg
2018-10-03T16:01:31.057Z,1538582491.057 [Supervisor](INFO): Opening Config file at: Config/lrauv-makai/vehicle.cfg
2018-10-03T16:01:31.242Z,1538582491.242 [Supervisor](INFO): Opening Config file at: Config/lrauv-makai/Servo.cfg
2018-10-03T16:01:31.342Z,1538582491.342 [Supervisor](INFO): Opening Config file at: Config/lrauv-makai/Navigation.cfg
2018-10-03T16:01:31.440Z,1538582491.440 [Supervisor](INFO): Opening Config file at: Config/lrauv-makai/goby.cfg
2018-10-03T16:01:31.539Z,1538582491.539 [ComponentRegistry](DEBUG): Loaded Config Component "Config/goby
2018-10-03T16:01:31.540Z,1538582491.540 [Supervisor](INFO): Opening Config file at: Config/lrauv-makai/BIT.cfg
2018-10-03T16:01:31.641Z,1538582491.641 [Supervisor](INFO): Opening Config file at: Config/lrauv-makai/secure.cfg
2018-10-03T16:01:31.725Z,1538582491.725 [Supervisor](IMPORTANT): Reading configuration overrides from Data/persisted.cfg
2018-10-03T16:01:31.750Z,1538582491.750 [Module Loader](DEBUG): Loading Module at Modules/Simulator.so
2018-10-03T16:01:31.875Z,1538582491.875 [Module Loader](DEBUG): Loaded Module: Simulator (This is the module containing the Simulator)
2018-10-03T16:01:31.876Z,1538582491.876 [Module Loader](DEBUG): Loading Module at Modules/Sample.so
2018-10-03T16:01:31.900Z,1538582491.900 [Module Loader](DEBUG): Loaded Module: Sample (This is a Sample Module of Sample Components)
2018-10-03T16:01:31.900Z,1538582491.900 [Module Loader](DEBUG): Loading Module at Modules/Derivation.so
2018-10-03T16:01:31.956Z,1538582491.956 [DepthRateCalculator] Loaded
2018-10-03T16:01:31.956Z,1538582491.956 [ComponentRegistry](DEBUG): SyncComponent "DepthRateCalculator" handled in the control thread.
2018-10-03T16:01:31.962Z,1538582491.962 [PitchRateCalculator] Loaded
2018-10-03T16:01:31.963Z,1538582491.963 [ComponentRegistry](DEBUG): SyncComponent "PitchRateCalculator" handled in the control thread.
2018-10-03T16:01:31.979Z,1538582491.979 [SpeedCalculator] Loaded
2018-10-03T16:01:31.979Z,1538582491.979 [ComponentRegistry](DEBUG): SyncComponent "SpeedCalculator" handled in the control thread.
2018-10-03T16:01:31.000Z,1538582492.000 [TempGradientCalculator] Loaded
2018-10-03T16:01:31.000Z,1538582492.000 [ComponentRegistry](DEBUG): SyncComponent "TempGradientCalculator" handled in the control thread.
2018-10-03T16:01:32.015Z,1538582492.015 [VerticalTemperatureHomogeneityIndexCalculator] Loaded
2018-10-03T16:01:32.016Z,1538582492.016 [ComponentRegistry](DEBUG): SyncComponent "VerticalTemperatureHomogeneityIndexCalculator" handled in the control thread.
2018-10-03T16:01:32.021Z,1538582492.021 [YawRateCalculator] Loaded
2018-10-03T16:01:32.022Z,1538582492.022 [ComponentRegistry](DEBUG): SyncComponent "YawRateCalculator" handled in the control thread.
2018-10-03T16:01:32.063Z,1538582492.063 [ElevatorOffsetCalculator] Loaded
2018-10-03T16:01:32.063Z,1538582492.063 [ComponentRegistry](DEBUG): SyncComponent "ElevatorOffsetCalculator" handled in the control thread.
2018-10-03T16:01:32.063Z,1538582492.063 [Module Loader](DEBUG): Loaded Module: Derivation (Contains the base derivation components)
2018-10-03T16:01:32.064Z,1538582492.064 [Module Loader](DEBUG): Loading Module at Modules/Trigger.so
2018-10-03T16:01:32.101Z,1538582492.101 [Module Loader](DEBUG): Loaded Module: Trigger (Contains triggers for use in missions)
2018-10-03T16:01:32.101Z,1538582492.101 [Module Loader](DEBUG): Loading Module at Modules/Sensor.so
2018-10-03T16:01:44.259Z,1538582504.259 [DataOverHttps] Loaded
2018-10-03T16:01:44.259Z,1538582504.259 [ComponentRegistry](DEBUG): SyncComponent "DataOverHttps" handled in the control thread.
2018-10-03T16:01:44.286Z,1538582504.286 [Depth_Keller] Loaded
2018-10-03T16:01:44.286Z,1538582504.286 [ComponentRegistry](DEBUG): SyncComponent "Depth_Keller" handled in the control thread.
2018-10-03T16:01:44.295Z,1538582504.295 [GobyModem] Loaded
2018-10-03T16:01:44.295Z,1538582504.295 [ComponentRegistry](DEBUG): SyncComponent "GobyModem" handled in the control thread.
2018-10-03T16:01:44.393Z,1538582504.393 [NAL9602] Loaded
2018-10-03T16:01:44.393Z,1538582504.393 [ComponentRegistry](DEBUG): SyncComponent "NAL9602" handled in the control thread.
2018-10-03T16:01:44.409Z,1538582504.409 [Onboard] Loaded
2018-10-03T16:01:44.409Z,1538582504.409 [ComponentRegistry](DEBUG): SyncComponent "Onboard" handled in the control thread.
2018-10-03T16:01:44.419Z,1538582504.419 [Radio_Surface] Loaded
2018-10-03T16:01:44.420Z,1538582504.420 [ComponentRegistry](DEBUG): Component "Radio_Surface" handled in its own thread.
2018-10-03T16:01:44.421Z,1538582504.421 [Radio_Surface ThreadHandler](DEBUG): Created PCaller Thread at 419CB4E0
2018-10-03T16:01:44.421Z,1538582504.421 [Radio_Surface ThreadHandler](INFO): Protected caller Thread ID is 886
2018-10-03T16:01:44.574Z,1538582504.574 [PNI_TCM] Loaded
2018-10-03T16:01:44.575Z,1538582504.575 [ComponentRegistry](DEBUG): SyncComponent "PNI_TCM" handled in the control thread.
2018-10-03T16:01:46.354Z,1538582506.354 [BPC1] Loaded
2018-10-03T16:01:46.354Z,1538582506.354 [ComponentRegistry](DEBUG): SyncComponent "BPC1" handled in the control thread.
2018-10-03T16:01:46.354Z,1538582506.354 [Module Loader](DEBUG): Loaded Module: Sensor (Contains the sensor components)
2018-10-03T16:01:46.356Z,1538582506.356 [Module Loader](DEBUG): Loading Module at Modules/BIT.so
2018-10-03T16:01:46.520Z,1538582506.520 [SBIT](DEBUG): Construct Startup Built In Test.
2018-10-03T16:01:46.596Z,1538582506.596 [SBIT] Loaded
2018-10-03T16:01:46.597Z,1538582506.597 [ComponentRegistry](DEBUG): SyncComponent "SBIT" handled in the control thread.
2018-10-03T16:01:46.597Z,1538582506.597 [IBIT](DEBUG): Construct Initiated Built In Test.
2018-10-03T16:01:46.651Z,1538582506.651 [IBIT] Loaded
2018-10-03T16:01:46.652Z,1538582506.652 [ComponentRegistry](DEBUG): SyncComponent "IBIT" handled in the control thread.
2018-10-03T16:01:46.655Z,1538582506.655 [CBIT](DEBUG): Construct Continuous Built In Test.
2018-10-03T16:01:47.002Z,1538582507.002 [CBIT] Loaded
2018-10-03T16:01:47.002Z,1538582507.002 [ComponentRegistry](DEBUG): SyncComponent "CBIT" handled in the control thread.
2018-10-03T16:01:47.002Z,1538582507.002 [Module Loader](DEBUG): Loaded Module: BIT (Contains the BuiltInTest components, such as C Built In Test)
2018-10-03T16:01:47.003Z,1538582507.003 [Module Loader](DEBUG): Loading Module at Modules/Science.so
2018-10-03T16:01:47.196Z,1538582507.196 [Aanderaa_O2] Loaded
2018-10-03T16:01:47.196Z,1538582507.196 [ComponentRegistry](DEBUG): SyncComponent "Aanderaa_O2" handled in the control thread.
2018-10-03T16:01:47.213Z,1538582507.213 [ESPComponent] Loaded
2018-10-03T16:01:47.214Z,1538582507.214 [ComponentRegistry](DEBUG): SyncComponent "ESPComponent" handled in the control thread.
2018-10-03T16:01:47.228Z,1538582507.228 [PAR_Licor] Loaded
2018-10-03T16:01:47.229Z,1538582507.229 [ComponentRegistry](DEBUG): SyncComponent "PAR_Licor" handled in the control thread.
2018-10-03T16:01:47.278Z,1538582507.278 [WetLabsBB2FL] Loaded
2018-10-03T16:01:47.278Z,1538582507.278 [ComponentRegistry](DEBUG): Component "WetLabsBB2FL" handled in its own thread.
2018-10-03T16:01:47.279Z,1538582507.279 [WetLabsBB2FL ThreadHandler](DEBUG): Created PCaller Thread at 41A8F4E0
2018-10-03T16:01:47.279Z,1538582507.279 [WetLabsBB2FL ThreadHandler](INFO): Protected caller Thread ID is 887
2018-10-03T16:01:47.280Z,1538582507.280 [Module Loader](DEBUG): Loaded Module: Science (Contains the science components)
2018-10-03T16:01:47.281Z,1538582507.281 [Module Loader](DEBUG): Loading Module at Modules/Guidance.so
2018-10-03T16:01:47.557Z,1538582507.557 [Module Loader](DEBUG): Loaded Module: Guidance (Contains behaviors and commands)
2018-10-03T16:01:47.557Z,1538582507.557 [Module Loader](DEBUG): Loading Module at Modules/Control.so
2018-10-03T16:01:47.645Z,1538582507.645 [VerticalControl](DEBUG): Construct VerticalControl.
2018-10-03T16:01:47.740Z,1538582507.740 [VerticalControl] Loaded
2018-10-03T16:01:47.740Z,1538582507.740 [ComponentRegistry](DEBUG): SyncComponent "VerticalControl" handled in the control thread.
2018-10-03T16:01:47.741Z,1538582507.741 [HorizontalControl](DEBUG): Construct HorizontalControl.
2018-10-03T16:01:47.801Z,1538582507.801 [HorizontalControl] Loaded
2018-10-03T16:01:47.802Z,1538582507.802 [ComponentRegistry](DEBUG): SyncComponent "HorizontalControl" handled in the control thread.
2018-10-03T16:01:47.802Z,1538582507.802 [SpeedControl](DEBUG): Construct SpeedControl.
2018-10-03T16:01:47.808Z,1538582507.808 [SpeedControl] Loaded
2018-10-03T16:01:47.808Z,1538582507.808 [ComponentRegistry](DEBUG): SyncComponent "SpeedControl" handled in the control thread.
2018-10-03T16:01:47.809Z,1538582507.809 [LoopControl](DEBUG): Construct LoopControl.
2018-10-03T16:01:47.809Z,1538582507.809 [LoopControl] Loaded
2018-10-03T16:01:47.809Z,1538582507.809 [ComponentRegistry](DEBUG): SyncComponent "LoopControl" handled in the control thread.
2018-10-03T16:01:47.810Z,1538582507.810 [Module Loader](DEBUG): Loaded Module: Control (Contains the Control components, such as Depth, Heading, and Speed Control)
2018-10-03T16:01:47.810Z,1538582507.810 [Module Loader](DEBUG): Loading Module at Modules/Estimation.so
2018-10-03T16:01:47.931Z,1538582507.931 [StratificationFrontDetector](INFO): threshold set to: 0.399988 degC
2018-10-03T16:01:47.932Z,1538582507.932 [StratificationFrontDetector](DEBUG): (re)initializing
2018-10-03T16:01:47.932Z,1538582507.932 [StratificationFrontDetector] Loaded
2018-10-03T16:01:47.932Z,1538582507.932 [ComponentRegistry](DEBUG): SyncComponent "StratificationFrontDetector" handled in the control thread.
2018-10-03T16:01:47.933Z,1538582507.933 [Module Loader](DEBUG): Loaded Module: Estimation (Contains the base estimation components)
2018-10-03T16:01:47.933Z,1538582507.933 [Module Loader](DEBUG): Loading Module at Modules/Servo.so
2018-10-03T16:01:48.052Z,1538582508.052 [BuoyancyServo] Loaded
2018-10-03T16:01:48.052Z,1538582508.052 [ComponentRegistry](DEBUG): SyncComponent "BuoyancyServo" handled in the control thread.
2018-10-03T16:01:48.064Z,1538582508.064 [ElevatorServo] Loaded
2018-10-03T16:01:48.064Z,1538582508.064 [ComponentRegistry](DEBUG): SyncComponent "ElevatorServo" handled in the control thread.
2018-10-03T16:01:48.075Z,1538582508.075 [MassServo] Loaded
2018-10-03T16:01:48.075Z,1538582508.075 [ComponentRegistry](DEBUG): SyncComponent "MassServo" handled in the control thread.
2018-10-03T16:01:48.087Z,1538582508.087 [RudderServo] Loaded
2018-10-03T16:01:48.087Z,1538582508.087 [ComponentRegistry](DEBUG): SyncComponent "RudderServo" handled in the control thread.
2018-10-03T16:01:48.098Z,1538582508.098 [ThrusterServo] Loaded
2018-10-03T16:01:48.098Z,1538582508.098 [ComponentRegistry](DEBUG): SyncComponent "ThrusterServo" handled in the control thread.
2018-10-03T16:01:48.099Z,1538582508.099 [Module Loader](DEBUG): Loaded Module: Servo (This is the module containing motor controllers)
2018-10-03T16:01:48.099Z,1538582508.099 [Module Loader](DEBUG): Loading Module at Modules/Navigation.so
2018-10-03T16:01:48.206Z,1538582508.206 [DeadReckonUsingSpeedCalculator] Loaded
2018-10-03T16:01:48.207Z,1538582508.207 [ComponentRegistry](DEBUG): SyncComponent "DeadReckonUsingSpeedCalculator" handled in the control thread.
2018-10-03T16:01:48.211Z,1538582508.211 [UniversalFixResidualReporter] Loaded
2018-10-03T16:01:48.211Z,1538582508.211 [ComponentRegistry](DEBUG): SyncComponent "UniversalFixResidualReporter" handled in the control thread.
2018-10-03T16:01:48.212Z,1538582508.212 [Module Loader](DEBUG): Loaded Module: Navigation (Contains the base navigation components)
2018-10-03T16:01:48.215Z,1538582508.215 [ComponentRegistry](DEBUG): SyncComponent "MissionManager" handled in the control thread.
2018-10-03T16:01:48.216Z,1538582508.216 [ComponentRegistry](DEBUG): SyncComponent "Reporter" handled in the control thread.
2018-10-03T16:01:48.223Z,1538582508.223 [ComponentRegistry](DEBUG): Component "NavChartDb" handled in its own thread.
2018-10-03T16:01:48.224Z,1538582508.224 [NavChartDb ThreadHandler](DEBUG): Created PCaller Thread at 41BE84E0
2018-10-03T16:01:48.224Z,1538582508.224 [NavChartDb ThreadHandler](INFO): Protected caller Thread ID is 888
2018-10-03T16:01:48.229Z,1538582508.229 [Supervisor](INFO): Main Thread ID is 800
2018-10-03T16:01:48.229Z,1538582508.229 [Supervisor](DEBUG): Running supervisor.
2018-10-03T16:01:48.230Z,1538582508.230 [CommandLine ThreadHandler](INFO): Handler Thread ID is 889
2018-10-03T16:01:48.232Z,1538582508.232 [controlThread ThreadHandler](INFO): Handler Thread ID is 890
2018-10-03T16:01:48.232Z,1538582508.232 [controlThread](DEBUG): Initializing ControlThread
2018-10-03T16:01:48.233Z,1538582508.233 [DepthRateCalculator](DEBUG): Initializing DepthRateCalculator.
2018-10-03T16:01:48.234Z,1538582508.234 [PitchRateCalculator](DEBUG): Initializing PitchRateCalculator.
2018-10-03T16:01:48.234Z,1538582508.234 [SpeedCalculator](DEBUG): Initializing SpeedCalculator.
2018-10-03T16:01:48.234Z,1538582508.234 [TempGradientCalculator](DEBUG): Initializing TempGradientCalculator.
2018-10-03T16:01:48.235Z,1538582508.235 [VerticalTemperatureHomogeneityIndexCalculator](DEBUG): (re)initializing
2018-10-03T16:01:48.236Z,1538582508.236 [YawRateCalculator](DEBUG): Initializing YawRateCalculator.
2018-10-03T16:01:48.236Z,1538582508.236 [ElevatorOffsetCalculator](DEBUG): Initializing ElevatorOffsetCalculator.
2018-10-03T16:01:48.255Z,1538582508.255 [logger ThreadHandler](INFO): Handler Thread ID is 891
2018-10-03T16:01:48.283Z,1538582508.283 [Radio_Surface ThreadHandler](INFO): Handler Thread ID is 892
2018-10-03T16:01:48.289Z,1538582508.289 [Radio_Surface](INFO): Powering up
2018-10-03T16:01:48.303Z,1538582508.303 [WetLabsBB2FL ThreadHandler](INFO): Handler Thread ID is 893
2018-10-03T16:01:48.304Z,1538582508.304 [WetLabsBB2FL](INFO): Powering down
2018-10-03T16:01:48.347Z,1538582508.347 [NavChartDb ThreadHandler](INFO): Handler Thread ID is 894
2018-10-03T16:01:48.447Z,1538582508.447 [NavChartDb](INFO): Looking for Electronic Nav Chart file at: Resources/ElectronicNavigationCharts/US4MI11M.000
2018-10-03T16:01:48.447Z,1538582508.447 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US4MI11M.000
2018-10-03T16:01:48.447Z,1538582508.447 [NavChartDb](INFO): Looking for Electronic Nav Chart file at: Resources/ElectronicNavigationCharts/US5MI07M.000
2018-10-03T16:01:48.447Z,1538582508.447 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5MI07M.000
2018-10-03T16:01:48.448Z,1538582508.448 [NavChartDb](INFO): Looking for Electronic Nav Chart file at: Resources/ElectronicNavigationCharts/US5OH07M.000
2018-10-03T16:01:48.448Z,1538582508.448 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5OH07M.000
2018-10-03T16:01:48.448Z,1538582508.448 [NavChartDb](INFO): Looking for Electronic Nav Chart file at: Resources/ElectronicNavigationCharts/US5OH31M.000
2018-10-03T16:01:48.448Z,1538582508.448 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5OH31M.000
2018-10-03T16:03:20.756Z,1538582600.756 [GobyModem](CRITICAL): exception at startup: Failed to startup.
2018-10-03T16:03:20.814Z,1538582600.814 [SBIT](INFO): Initialize SBIT Component.
2018-10-03T16:03:20.815Z,1538582600.815 [SBIT](IMPORTANT): git: 2018-09-06-4-gec17f04
2018-10-03T16:03:20.815Z,1538582600.815 [SBIT](INFO): git hash: ec17f04c03492d554d64019aa93bf1adb3b9dd40
2018-10-03T16:03:20.815Z,1538582600.815 [SBIT](IMPORTANT): Kernel Release: 2.6.27.8
2018-10-03T16:03:20.817Z,1538582600.817 [SBIT](INFO): Kernel Reporting Different Version From Configuration.
Kernel Expected: #639 PREEMPT Wed Mar 12 12:53:33 PDT 2014
Kernel Reported: #2 PREEMPT Thu Jan 11 20:13:48 PST 2018
2018-10-03T16:03:20.818Z,1538582600.818 [SBIT](INFO): Beginning SBIT in 28.000000 seconds.
2018-10-03T16:03:20.819Z,1538582600.819 [IBIT](INFO): Initialize IBIT Component.
2018-10-03T16:03:20.820Z,1538582600.820 [CBIT](DEBUG): Initialize CBIT Component.
2018-10-03T16:03:20.820Z,1538582600.820 [CBIT](INFO): Last reboot was NOT due to watchdog timer.
2018-10-03T16:03:20.932Z,1538582600.932 [VerticalControl](DEBUG): Initialize VerticalControlComponent.
2018-10-03T16:03:20.934Z,1538582600.934 [HorizontalControl](DEBUG): Initialize HorizontalControlComponent.
2018-10-03T16:03:20.939Z,1538582600.939 [SpeedControl](DEBUG): Initialize SpeedControlComponent.
2018-10-03T16:03:20.939Z,1538582600.939 [LoopControl](DEBUG): Initialize LoopControlComponent.
2018-10-03T16:03:20.941Z,1538582600.941 [DeadReckonUsingSpeedCalculator](DEBUG): Initializing DeadReckonUsingSpeedCalculator component.
2018-10-03T16:03:20.942Z,1538582600.942 [DeadReckonUsingSpeedCalculator](INFO): Will consider orientation measurement stale after 120s.
2018-10-03T16:03:20.943Z,1538582600.943 [DeadReckonUsingSpeedCalculator](INFO): Will consider velocity measurement stale after 20s.
2018-10-03T16:03:20.943Z,1538582600.943 [UniversalFixResidualReporter](DEBUG): Initializing UniversalFixResidualReporter component.
2018-10-03T16:03:20.944Z,1538582600.944 [MissionManager](INFO): Loading Mission: Missions/Startup.xml
2018-10-03T16:03:20.969Z,1538582600.969 [Startup:A.GoToSurface](DEBUG): Construct GoToSurface.
2018-10-03T16:03:20.981Z,1538582600.981 [MissionManager](DEBUG): 
<?xml version="1.0" encoding="UTF-8"?>
<Mission xmlns="Tethys"
       xmlns:Control="Tethys/Control"
       xmlns:Guidance="Tethys/Guidance" 
       xmlns:Units="Tethys/Units"
       xmlns:Universal="Tethys/Universal"
       xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
       xsi:schemaLocation="Tethys http://okeanids.mbari.org/tethys/Xml/Tethys.xsd
                           Tethys/Control http://okeanids.mbari.org/tethys/Xml/Control.xsd
                           Tethys/Guidance http://okeanids.mbari.org/tethys/Xml/Guidance.xsd
                           Tethys/Units http://okeanids.mbari.org/tethys/Xml/Units.xsd
                           Tethys/Universal http://okeanids.mbari.org/tethys/Xml/Universal.xsd"
       Id="Startup">

    <Guidance:GoToSurface>
        <Progression/>
    </Guidance:GoToSurface>

    <Aggregate Id="StartupSatComms">

        <Sequence/>

        <ReadDatum>
            <Timeout Duration="P1M" />
            <Universal:latitude_fix/>
        </ReadDatum>

        <ReadDatum>
            <Timeout Duration="P1M" />
            <Universal:platform_communications/>
        </ReadDatum>

    </Aggregate>

</Mission>


2018-10-03T16:03:20.982Z,1538582600.982 [MissionManager](INFO): Loading Mission: Missions/Default.xml
2018-10-03T16:03:21.058Z,1538582601.058 [MissionManager](INFO): DefineArg Default.ElapsedSinceDefaultStarted = 0.000000 min
2018-10-03T16:03:21.071Z,1538582601.071 [Default:A.Wait](DEBUG): Construct Wait.
2018-10-03T16:03:21.073Z,1538582601.073 [Default:B.GoToSurface](DEBUG): Construct GoToSurface.
2018-10-03T16:03:21.090Z,1538582601.090 [Default:CheckIn:Read_Iridium:A_Timeout:A.Execute](DEBUG): Construct Execute.
2018-10-03T16:03:21.097Z,1538582601.097 [Default:CheckIn:C.Wait](DEBUG): Construct Wait.
2018-10-03T16:03:21.103Z,1538582601.103 [Default:E.Execute](DEBUG): Construct Execute.
2018-10-03T16:03:21.127Z,1538582601.127 [MissionManager](DEBUG): 
<?xml version="1.0" encoding="UTF-8"?>
<Mission xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
         xmlns="Tethys"
         xmlns:Units="Tethys/Units"
         xmlns:Guidance="Tethys/Guidance"
         xmlns:Universal="Tethys/Universal"
         xsi:schemaLocation="Tethys http://okeanids.mbari.org/tethys/Xml/Tethys.xsd
                             Tethys/Units http://okeanids.mbari.org/tethys/Xml/Units.xsd
                             Tethys/Guidance http://okeanids.mbari.org/tethys/Xml/Guidance.xsd
                             Tethys/Universal http://okeanids.mbari.org/tethys/Xml/Universal.xsd"
         Id="Default">

    <DefineArg Name="ElapsedSinceDefaultStarted"><Units:minute/><Value>0</Value></DefineArg>

    <Guidance:Wait>
        <Description>
            Wait a moment to see if the scheduler starts a new mission before
            starting to actually run Default.
        </Description>
        <Sequence/>
        <Setting><Guidance:Wait.duration/><Units:second/><Value>13</Value></Setting>
    </Guidance:Wait>

    <Guidance:GoToSurface>
        <Progression/>
    </Guidance:GoToSurface>

    <Aggregate Id="CheckIn">

        <Sequence Repeat="288"/>

        <ReadDatum Id="Read_GPS">
            <Timeout Duration="P5M"/>
            <Universal:time_fix/>
        </ReadDatum>

        <ReadDatum Id="Read_Iridium">
            <Timeout Duration="P2H">
                <Guidance:Execute>
                    <Sequence/>
                    <Setting><Guidance:Execute.command/><String>Burn on</String></Setting>
                </Guidance:Execute>
                <Syslog Severity="Critical">Dropped weight due to communications timeout.</Syslog>
            </Timeout>
            <Universal:platform_communications/>
        </ReadDatum>

        <Guidance:Wait>
            <Sequence/>
            <Setting><Guidance:Wait.duration/><Units:minute/><Value>5</Value></Setting>
        </Guidance:Wait>

        <Assign><Sequence/><Arg Name="ElapsedSinceDefaultStarted"/><Elapsed><Universal:mission_started/></Elapsed></Assign>

        <Syslog Severity="Important">Default mission has been running for <Arg Name="ElapsedSinceDefaultStarted"/><Units:minute/></Syslog>

    </Aggregate>

    <Syslog Severity="Important">Restarting logs and Default mission.</Syslog>

    <Guidance:Execute>
        <Sequence/>
        <Setting><Guidance:Execute.command/><String>restart logs</String></Setting>
    </Guidance:Execute>

</Mission>


2018-10-03T16:03:21.133Z,1538582601.133 [controlThread](DEBUG): Component order: CycleStarter,DataOverHttps,Depth_Keller,GobyModem,NAL9602,Onboard,PNI_TCM,BPC1,Aanderaa_O2,ESPComponent,PAR_Licor,Depth_Keller,PAR_Licor,DepthRateCalculator,PitchRateCalculator,SpeedCalculator,TempGradientCalculator,VerticalTemperatureHomogeneityIndexCalculator,YawRateCalculator,ElevatorOffsetCalculator,StratificationFrontDetector,DeadReckonUsingSpeedCalculator,UniversalFixResidualReporter,MissionManager,VerticalControl,HorizontalControl,SpeedControl,LoopControl,BuoyancyServo,ElevatorServo,MassServo,RudderServo,ThrusterServo,SBIT,IBIT,CBIT,Reporter,LogSplitter,
2018-10-03T16:03:21.142Z,1538582601.142 [DataOverHttps](DEBUG): dashIP=134.89.2.23 starts with a digit so assuming it is a numeric IP
2018-10-03T16:03:21.229Z,1538582601.229 [Depth_Keller](ERROR): Pressure reading out of range: 1895.684326 decibar
2018-10-03T16:03:21.254Z,1538582601.254 [NAL9602](INFO): Powering up NAL9602
2018-10-03T16:03:21.393Z,1538582601.393 [ESPComponent](INFO): powering down ESP
2018-10-03T16:03:21.569Z,1538582601.569 [DepthRateCalculator](ERROR): Depth measurement is not active
2018-10-03T16:03:21.653Z,1538582601.653 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2018-10-03T16:03:21.793Z,1538582601.793 [BuoyancyServo](DEBUG): Initializing EZServoServo.
2018-10-03T16:03:21.799Z,1538582601.799 [BuoyancyServo](DEBUG): Initializing BuoyancyServo.
2018-10-03T16:03:21.806Z,1538582601.806 [ElevatorServo](DEBUG): Initializing EZServoServo.
2018-10-03T16:03:21.811Z,1538582601.811 [ElevatorServo](DEBUG): Initializing ElevatorServo.
2018-10-03T16:03:21.817Z,1538582601.817 [MassServo](DEBUG): Initializing EZServoServo.
2018-10-03T16:03:21.823Z,1538582601.823 [MassServo](DEBUG): Initializing MassServo.
2018-10-03T16:03:21.829Z,1538582601.829 [RudderServo](DEBUG): Initializing EZServoServo.
2018-10-03T16:03:21.835Z,1538582601.835 [RudderServo](DEBUG): Initializing RudderServo.
2018-10-03T16:03:21.841Z,1538582601.841 [ThrusterServo](DEBUG): Initializing EZServoServo.
2018-10-03T16:03:21.847Z,1538582601.847 [ThrusterServo](DEBUG): Initializing ThrusterServo.
2018-10-03T16:03:21.869Z,1538582601.869 [CommandLine](FAULT): Scheduling is paused
2018-10-03T16:03:21.870Z,1538582601.870 [CBIT](INFO): Critical error at 20181003T160320
2018-10-03T16:03:21.870Z,1538582601.870 [Supervisor](INFO): Stop Mission called by CBIT::checkCriticals
2018-10-03T16:03:22.109Z,1538582602.109 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2018-10-03T16:03:22.344Z,1538582602.344 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2018-10-03T16:03:22.682Z,1538582602.682 [BuoyancyServo](ERROR): Buoyancy initialization uart error serial timeout
2018-10-03T16:03:22.683Z,1538582602.683 [BuoyancyServo](FAULT): Buoyancy failed to initialize
2018-10-03T16:03:22.683Z,1538582602.683 [BuoyancyServo] Communications Fault, FailCount= 1
2018-10-03T16:03:22.683Z,1538582602.683 [BuoyancyServo](ERROR): Communications Fault
2018-10-03T16:03:23.046Z,1538582603.046 [RudderServo](ERROR): Rudder initialization uart error serial timeout
2018-10-03T16:03:23.047Z,1538582603.047 [RudderServo](FAULT): Rudder failed to initialize
2018-10-03T16:03:23.047Z,1538582603.047 [RudderServo] Communications Fault, FailCount= 1
2018-10-03T16:03:23.047Z,1538582603.047 [RudderServo](ERROR): Communications Fault
2018-10-03T16:03:23.156Z,1538582603.156 [CBIT](ERROR): Communications Fault in component: BuoyancyServo
2018-10-03T16:03:23.156Z,1538582603.156 [CBIT](ERROR): Communications Fault in component: RudderServo
2018-10-03T16:03:23.221Z,1538582603.221 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2018-10-03T16:03:23.227Z,1538582603.227 [BuoyancyServo](DEBUG): Uninitialize Buoyancy Servo.
2018-10-03T16:03:23.228Z,1538582603.228 [BuoyancyServo](INFO): Powering down
2018-10-03T16:03:23.280Z,1538582603.280 [RudderServo](DEBUG): Uninitialize Rudder Servo.
2018-10-03T16:03:23.280Z,1538582603.280 [RudderServo](INFO): Powering down
2018-10-03T16:03:23.623Z,1538582603.623 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2018-10-03T16:03:24.004Z,1538582604.004 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2018-10-03T16:03:24.035Z,1538582604.035 [RudderServo](DEBUG): Initializing EZServoServo.
2018-10-03T16:03:24.155Z,1538582604.155 [RudderServo](DEBUG): Initializing RudderServo.
2018-10-03T16:03:24.160Z,1538582604.160 [CBIT](INFO): Clearing failed state for component RudderServo
2018-10-03T16:03:24.160Z,1538582604.160 [RudderServo] No Fault, FailCount= 1
2018-10-03T16:03:24.395Z,1538582604.395 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2018-10-03T16:03:24.795Z,1538582604.795 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2018-10-03T16:03:25.204Z,1538582605.204 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2018-10-03T16:03:25.554Z,1538582605.554 [ThrusterServo](ERROR): Thruster uart error: serial timeout
2018-10-03T16:03:25.554Z,1538582605.554 [ThrusterServo] Communications Fault, FailCount= 1
2018-10-03T16:03:25.555Z,1538582605.555 [ThrusterServo](ERROR): Communications Fault
2018-10-03T16:03:25.558Z,1538582605.558 [CBIT](INF