2018-08-07T17:35:46.214Z,1533663346.214 [Supervisor](DEBUG): Initializing supervisor.
2018-08-07T17:35:46.216Z,1533663346.216 [SyncHandler](DEBUG): Created PCaller Thread at 404514E0
2018-08-07T17:35:46.217Z,1533663346.217 [SyncHandler](INFO): Protected caller Thread ID is 797
2018-08-07T17:35:46.218Z,1533663346.218 [ComponentRegistry](DEBUG): Component "controlThread" handled in its own thread.
2018-08-07T17:35:46.218Z,1533663346.218 [controlThread ThreadHandler](DEBUG): Created PCaller Thread at 404814E0
2018-08-07T17:35:46.219Z,1533663346.219 [controlThread ThreadHandler](INFO): Protected caller Thread ID is 798
2018-08-07T17:35:46.222Z,1533663346.222 [ComponentRegistry](DEBUG): SyncComponent "CycleStarter" handled in the control thread.
2018-08-07T17:35:46.233Z,1533663346.233 [ComponentRegistry](DEBUG): Component "CommandLine" handled in its own thread.
2018-08-07T17:35:46.234Z,1533663346.234 [CommandLine ThreadHandler](DEBUG): Created PCaller Thread at 404B14E0
2018-08-07T17:35:46.234Z,1533663346.234 [CommandLine ThreadHandler](INFO): Protected caller Thread ID is 799
2018-08-07T17:35:46.235Z,1533663346.235 [ComponentRegistry](DEBUG): Component "logger" handled in its own thread.
2018-08-07T17:35:46.236Z,1533663346.236 [logger ThreadHandler](DEBUG): Created PCaller Thread at 404E14E0
2018-08-07T17:35:46.236Z,1533663346.236 [logger ThreadHandler](INFO): Protected caller Thread ID is 800
2018-08-07T17:35:46.238Z,1533663346.238 [ComponentRegistry](DEBUG): SyncComponent "LogSplitter" handled in the control thread.
2018-08-07T17:35:46.239Z,1533663346.239 [Supervisor](INFO): Looking for Config files in directory: Config/
2018-08-07T17:35:46.243Z,1533663346.243 [Supervisor](INFO): Opening Config file at: Config/Sample.cfg
2018-08-07T17:35:46.342Z,1533663346.342 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Sample
2018-08-07T17:35:46.343Z,1533663346.343 [Supervisor](INFO): Opening Config file at: Config/workSite.cfg
2018-08-07T17:35:46.447Z,1533663346.447 [ComponentRegistry](DEBUG): Loaded Config Component "Config/workSite
2018-08-07T17:35:46.449Z,1533663346.449 [Supervisor](INFO): Opening Config file at: Config/logger.cfg
2018-08-07T17:35:46.659Z,1533663346.659 [ComponentRegistry](DEBUG): Loaded Config Component "Config/logger
2018-08-07T17:35:46.661Z,1533663346.661 [Supervisor](INFO): Opening Config file at: Config/Science.cfg
2018-08-07T17:35:46.998Z,1533663346.998 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Science
2018-08-07T17:35:46.999Z,1533663346.999 [Supervisor](INFO): Opening Config file at: Config/Control.cfg
2018-08-07T17:35:47.350Z,1533663347.350 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Control
2018-08-07T17:35:47.352Z,1533663347.352 [Supervisor](INFO): Opening Config file at: Config/Simulator.cfg
2018-08-07T17:35:47.828Z,1533663347.828 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Simulator
2018-08-07T17:35:47.828Z,1533663347.828 [Supervisor](INFO): Opening Config file at: Config/Sensor.cfg
2018-08-07T17:35:48.264Z,1533663348.264 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Sensor
2018-08-07T17:35:48.265Z,1533663348.265 [Supervisor](INFO): Opening Config file at: Config/vehicle.cfg
2018-08-07T17:35:48.754Z,1533663348.754 [ComponentRegistry](DEBUG): Loaded Config Component "Config/vehicle
2018-08-07T17:35:48.756Z,1533663348.756 [Supervisor](INFO): Opening Config file at: Config/Guidance.cfg
2018-08-07T17:35:48.839Z,1533663348.839 [Supervisor](INFO): Opening Config file at: Config/Servo.cfg
2018-08-07T17:35:49.151Z,1533663349.151 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Servo
2018-08-07T17:35:49.152Z,1533663349.152 [Supervisor](INFO): Opening Config file at: Config/Derivation.cfg
2018-08-07T17:35:49.301Z,1533663349.301 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Derivation
2018-08-07T17:35:49.302Z,1533663349.302 [Supervisor](INFO): Opening Config file at: Config/Navigation.cfg
2018-08-07T17:35:49.517Z,1533663349.517 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Navigation
2018-08-07T17:35:49.519Z,1533663349.519 [Supervisor](INFO): Opening Config file at: Config/BIT.cfg
2018-08-07T17:35:49.740Z,1533663349.740 [ComponentRegistry](DEBUG): Loaded Config Component "Config/BIT
2018-08-07T17:35:49.740Z,1533663349.740 [Supervisor](INFO): Opening Config file at: Config/secure.cfg
2018-08-07T17:35:49.841Z,1533663349.841 [ComponentRegistry](DEBUG): Loaded Config Component "Config/secure
2018-08-07T17:35:49.842Z,1533663349.842 [Supervisor](INFO): Opening Config file at: Config/Estimation.cfg
2018-08-07T17:35:50.057Z,1533663350.057 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Estimation
2018-08-07T17:35:50.059Z,1533663350.059 [Supervisor](INFO): Looking for Config files in directory: Config/lrauv-makai/
2018-08-07T17:35:50.525Z,1533663350.525 [Supervisor](INFO): Opening Config file at: Config/lrauv-makai/Battery.cfg
2018-08-07T17:35:51.021Z,1533663351.021 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Battery
2018-08-07T17:35:51.022Z,1533663351.022 [Supervisor](INFO): Opening Config file at: Config/lrauv-makai/logger.cfg
2018-08-07T17:35:51.130Z,1533663351.130 [Supervisor](INFO): Opening Config file at: Config/lrauv-makai/Science.cfg
2018-08-07T17:35:51.277Z,1533663351.277 [Supervisor](INFO): Opening Config file at: Config/lrauv-makai/Control.cfg
2018-08-07T17:35:51.373Z,1533663351.373 [Supervisor](INFO): Opening Config file at: Config/lrauv-makai/Simulator.cfg
2018-08-07T17:35:51.460Z,1533663351.460 [Supervisor](INFO): Opening Config file at: Config/lrauv-makai/Sensor.cfg
2018-08-07T17:35:51.608Z,1533663351.608 [Supervisor](INFO): Opening Config file at: Config/lrauv-makai/vehicle.cfg
2018-08-07T17:35:51.795Z,1533663351.795 [Supervisor](INFO): Opening Config file at: Config/lrauv-makai/Servo.cfg
2018-08-07T17:35:51.895Z,1533663351.895 [Supervisor](INFO): Opening Config file at: Config/lrauv-makai/Navigation.cfg
2018-08-07T17:35:51.991Z,1533663351.991 [Supervisor](INFO): Opening Config file at: Config/lrauv-makai/BIT.cfg
2018-08-07T17:35:52.107Z,1533663352.107 [Supervisor](INFO): Opening Config file at: Config/lrauv-makai/secure.cfg
2018-08-07T17:35:52.219Z,1533663352.219 [Supervisor](IMPORTANT): Reading configuration overrides from Data/persisted.cfg
2018-08-07T17:35:52.230Z,1533663352.230 [Module Loader](DEBUG): Loading Module at Modules/Simulator.so
2018-08-07T17:35:52.356Z,1533663352.356 [Module Loader](DEBUG): Loaded Module: Simulator (This is the module containing the Simulator)
2018-08-07T17:35:52.358Z,1533663352.358 [Module Loader](DEBUG): Loading Module at Modules/Sample.so
2018-08-07T17:35:52.382Z,1533663352.382 [Module Loader](DEBUG): Loaded Module: Sample (This is a Sample Module of Sample Components)
2018-08-07T17:35:52.383Z,1533663352.383 [Module Loader](DEBUG): Loading Module at Modules/Derivation.so
2018-08-07T17:35:52.439Z,1533663352.439 [DepthRateCalculator] Loaded
2018-08-07T17:35:52.439Z,1533663352.439 [ComponentRegistry](DEBUG): SyncComponent "DepthRateCalculator" handled in the control thread.
2018-08-07T17:35:52.445Z,1533663352.445 [PitchRateCalculator] Loaded
2018-08-07T17:35:52.445Z,1533663352.445 [ComponentRegistry](DEBUG): SyncComponent "PitchRateCalculator" handled in the control thread.
2018-08-07T17:35:52.461Z,1533663352.461 [SpeedCalculator] Loaded
2018-08-07T17:35:52.462Z,1533663352.462 [ComponentRegistry](DEBUG): SyncComponent "SpeedCalculator" handled in the control thread.
2018-08-07T17:35:52.483Z,1533663352.483 [TempGradientCalculator] Loaded
2018-08-07T17:35:52.483Z,1533663352.483 [ComponentRegistry](DEBUG): SyncComponent "TempGradientCalculator" handled in the control thread.
2018-08-07T17:35:52.498Z,1533663352.498 [VerticalTemperatureHomogeneityIndexCalculator] Loaded
2018-08-07T17:35:52.498Z,1533663352.498 [ComponentRegistry](DEBUG): SyncComponent "VerticalTemperatureHomogeneityIndexCalculator" handled in the control thread.
2018-08-07T17:35:52.504Z,1533663352.504 [YawRateCalculator] Loaded
2018-08-07T17:35:52.504Z,1533663352.504 [ComponentRegistry](DEBUG): SyncComponent "YawRateCalculator" handled in the control thread.
2018-08-07T17:35:52.544Z,1533663352.544 [ElevatorOffsetCalculator] Loaded
2018-08-07T17:35:52.545Z,1533663352.545 [ComponentRegistry](DEBUG): SyncComponent "ElevatorOffsetCalculator" handled in the control thread.
2018-08-07T17:35:52.545Z,1533663352.545 [Module Loader](DEBUG): Loaded Module: Derivation (Contains the base derivation components)
2018-08-07T17:35:52.546Z,1533663352.546 [Module Loader](DEBUG): Loading Module at Modules/Trigger.so
2018-08-07T17:35:52.583Z,1533663352.583 [Module Loader](DEBUG): Loaded Module: Trigger (Contains triggers for use in missions)
2018-08-07T17:35:52.584Z,1533663352.584 [Module Loader](DEBUG): Loading Module at Modules/Sensor.so
2018-08-07T17:35:53.064Z,1533663353.064 [AcousticModem_Benthos_ATM900] Loaded
2018-08-07T17:35:53.064Z,1533663353.064 [ComponentRegistry](DEBUG): SyncComponent "AcousticModem_Benthos_ATM900" handled in the control thread.
2018-08-07T17:35:53.199Z,1533663353.199 [DataOverHttps] Loaded
2018-08-07T17:35:53.199Z,1533663353.199 [ComponentRegistry](DEBUG): SyncComponent "DataOverHttps" handled in the control thread.
2018-08-07T17:35:53.213Z,1533663353.213 [Depth_Keller] Loaded
2018-08-07T17:35:53.213Z,1533663353.213 [ComponentRegistry](DEBUG): SyncComponent "Depth_Keller" handled in the control thread.
2018-08-07T17:35:53.218Z,1533663353.218 [DropWeight] Loaded
2018-08-07T17:35:53.218Z,1533663353.218 [ComponentRegistry](DEBUG): SyncComponent "DropWeight" handled in the control thread.
2018-08-07T17:35:53.315Z,1533663353.315 [NAL9602] Loaded
2018-08-07T17:35:53.316Z,1533663353.316 [ComponentRegistry](DEBUG): SyncComponent "NAL9602" handled in the control thread.
2018-08-07T17:35:53.332Z,1533663353.332 [Onboard] Loaded
2018-08-07T17:35:53.332Z,1533663353.332 [ComponentRegistry](DEBUG): SyncComponent "Onboard" handled in the control thread.
2018-08-07T17:35:53.342Z,1533663353.342 [Radio_Surface] Loaded
2018-08-07T17:35:53.343Z,1533663353.343 [ComponentRegistry](DEBUG): Component "Radio_Surface" handled in its own thread.
2018-08-07T17:35:53.344Z,1533663353.344 [Radio_Surface ThreadHandler](DEBUG): Created PCaller Thread at 407B84E0
2018-08-07T17:35:53.344Z,1533663353.344 [Radio_Surface ThreadHandler](INFO): Protected caller Thread ID is 881
2018-08-07T17:35:53.499Z,1533663353.499 [PNI_TCM] Loaded
2018-08-07T17:35:53.500Z,1533663353.500 [ComponentRegistry](DEBUG): SyncComponent "PNI_TCM" handled in the control thread.
2018-08-07T17:35:55.274Z,1533663355.274 [BPC1] Loaded
2018-08-07T17:35:55.275Z,1533663355.275 [ComponentRegistry](DEBUG): SyncComponent "BPC1" handled in the control thread.
2018-08-07T17:35:55.275Z,1533663355.275 [Module Loader](DEBUG): Loaded Module: Sensor (Contains the sensor components)
2018-08-07T17:35:55.277Z,1533663355.277 [Module Loader](DEBUG): Loading Module at Modules/BIT.so
2018-08-07T17:35:55.708Z,1533663355.708 [SBIT](DEBUG): Construct Startup Built In Test.
2018-08-07T17:35:55.759Z,1533663355.759 [SBIT] Loaded
2018-08-07T17:35:55.759Z,1533663355.759 [ComponentRegistry](DEBUG): SyncComponent "SBIT" handled in the control thread.
2018-08-07T17:35:55.760Z,1533663355.760 [IBIT](DEBUG): Construct Initiated Built In Test.
2018-08-07T17:35:55.772Z,1533663355.772 [IBIT] Loaded
2018-08-07T17:35:55.772Z,1533663355.772 [ComponentRegistry](DEBUG): SyncComponent "IBIT" handled in the control thread.
2018-08-07T17:35:55.775Z,1533663355.775 [CBIT](DEBUG): Construct Continuous Built In Test.
2018-08-07T17:35:55.926Z,1533663355.926 [CBIT] Loaded
2018-08-07T17:35:55.926Z,1533663355.926 [ComponentRegistry](DEBUG): SyncComponent "CBIT" handled in the control thread.
2018-08-07T17:35:55.926Z,1533663355.926 [Module Loader](DEBUG): Loaded Module: BIT (Contains the BuiltInTest components, such as C Built In Test)
2018-08-07T17:35:55.927Z,1533663355.927 [Module Loader](DEBUG): Loading Module at Modules/Science.so
2018-08-07T17:35:56.116Z,1533663356.116 [Aanderaa_O2] Loaded
2018-08-07T17:35:56.116Z,1533663356.116 [ComponentRegistry](DEBUG): SyncComponent "Aanderaa_O2" handled in the control thread.
2018-08-07T17:35:56.164Z,1533663356.164 [CTD_Seabird] Loaded
2018-08-07T17:35:56.165Z,1533663356.165 [ComponentRegistry](DEBUG): Component "CTD_Seabird" handled in its own thread.
2018-08-07T17:35:56.166Z,1533663356.166 [CTD_Seabird ThreadHandler](DEBUG): Created PCaller Thread at 4087B4E0
2018-08-07T17:35:56.166Z,1533663356.166 [CTD_Seabird ThreadHandler](INFO): Protected caller Thread ID is 882
2018-08-07T17:35:56.183Z,1533663356.183 [ESPComponent] Loaded
2018-08-07T17:35:56.184Z,1533663356.184 [ComponentRegistry](DEBUG): SyncComponent "ESPComponent" handled in the control thread.
2018-08-07T17:35:56.198Z,1533663356.198 [PAR_Licor] Loaded
2018-08-07T17:35:56.198Z,1533663356.198 [ComponentRegistry](DEBUG): SyncComponent "PAR_Licor" handled in the control thread.
2018-08-07T17:35:56.247Z,1533663356.247 [WetLabsBB2FL] Loaded
2018-08-07T17:35:56.247Z,1533663356.247 [ComponentRegistry](DEBUG): Component "WetLabsBB2FL" handled in its own thread.
2018-08-07T17:35:56.248Z,1533663356.248 [WetLabsBB2FL ThreadHandler](DEBUG): Created PCaller Thread at 408AB4E0
2018-08-07T17:35:56.249Z,1533663356.249 [WetLabsBB2FL ThreadHandler](INFO): Protected caller Thread ID is 883
2018-08-07T17:35:56.292Z,1533663356.292 [WetLabsSeaOWL_UV_A] Loaded
2018-08-07T17:35:56.292Z,1533663356.292 [ComponentRegistry](DEBUG): Component "WetLabsSeaOWL_UV_A" handled in its own thread.
2018-08-07T17:35:56.293Z,1533663356.293 [WetLabsSeaOWL_UV_A ThreadHandler](DEBUG): Created PCaller Thread at 408DB4E0
2018-08-07T17:35:56.294Z,1533663356.294 [WetLabsSeaOWL_UV_A ThreadHandler](INFO): Protected caller Thread ID is 884
2018-08-07T17:35:56.294Z,1533663356.294 [Module Loader](DEBUG): Loaded Module: Science (Contains the science components)
2018-08-07T17:35:56.295Z,1533663356.295 [Module Loader](DEBUG): Loading Module at Modules/Guidance.so
2018-08-07T17:35:56.573Z,1533663356.573 [Module Loader](DEBUG): Loaded Module: Guidance (Contains behaviors and commands)
2018-08-07T17:35:56.575Z,1533663356.575 [Module Loader](DEBUG): Loading Module at Modules/Control.so
2018-08-07T17:35:56.662Z,1533663356.662 [VerticalControl](DEBUG): Construct VerticalControl.
2018-08-07T17:35:56.758Z,1533663356.758 [VerticalControl] Loaded
2018-08-07T17:35:56.758Z,1533663356.758 [ComponentRegistry](DEBUG): SyncComponent "VerticalControl" handled in the control thread.
2018-08-07T17:35:56.759Z,1533663356.759 [HorizontalControl](DEBUG): Construct HorizontalControl.
2018-08-07T17:35:56.821Z,1533663356.821 [HorizontalControl] Loaded
2018-08-07T17:35:56.822Z,1533663356.822 [ComponentRegistry](DEBUG): SyncComponent "HorizontalControl" handled in the control thread.
2018-08-07T17:35:56.822Z,1533663356.822 [SpeedControl](DEBUG): Construct SpeedControl.
2018-08-07T17:35:56.828Z,1533663356.828 [SpeedControl] Loaded
2018-08-07T17:35:56.828Z,1533663356.828 [ComponentRegistry](DEBUG): SyncComponent "SpeedControl" handled in the control thread.
2018-08-07T17:35:56.829Z,1533663356.829 [LoopControl](DEBUG): Construct LoopControl.
2018-08-07T17:35:56.829Z,1533663356.829 [LoopControl] Loaded
2018-08-07T17:35:56.829Z,1533663356.829 [ComponentRegistry](DEBUG): SyncComponent "LoopControl" handled in the control thread.
2018-08-07T17:35:56.830Z,1533663356.830 [Module Loader](DEBUG): Loaded Module: Control (Contains the Control components, such as Depth, Heading, and Speed Control)
2018-08-07T17:35:56.830Z,1533663356.830 [Module Loader](DEBUG): Loading Module at Modules/Estimation.so
2018-08-07T17:35:56.952Z,1533663356.952 [StratificationFrontDetector](INFO): threshold set to: 0.399988 degC
2018-08-07T17:35:56.952Z,1533663356.952 [StratificationFrontDetector](DEBUG): (re)initializing
2018-08-07T17:35:56.952Z,1533663356.952 [StratificationFrontDetector] Loaded
2018-08-07T17:35:56.952Z,1533663356.952 [ComponentRegistry](DEBUG): SyncComponent "StratificationFrontDetector" handled in the control thread.
2018-08-07T17:35:56.953Z,1533663356.953 [Module Loader](DEBUG): Loaded Module: Estimation (Contains the base estimation components)
2018-08-07T17:35:56.954Z,1533663356.954 [Module Loader](DEBUG): Loading Module at Modules/Servo.so
2018-08-07T17:35:57.072Z,1533663357.072 [BuoyancyServo] Loaded
2018-08-07T17:35:57.072Z,1533663357.072 [ComponentRegistry](DEBUG): SyncComponent "BuoyancyServo" handled in the control thread.
2018-08-07T17:35:57.084Z,1533663357.084 [ElevatorServo] Loaded
2018-08-07T17:35:57.084Z,1533663357.084 [ComponentRegistry](DEBUG): SyncComponent "ElevatorServo" handled in the control thread.
2018-08-07T17:35:57.095Z,1533663357.095 [MassServo] Loaded
2018-08-07T17:35:57.095Z,1533663357.095 [ComponentRegistry](DEBUG): SyncComponent "MassServo" handled in the control thread.
2018-08-07T17:35:57.107Z,1533663357.107 [RudderServo] Loaded
2018-08-07T17:35:57.107Z,1533663357.107 [ComponentRegistry](DEBUG): SyncComponent "RudderServo" handled in the control thread.
2018-08-07T17:35:57.118Z,1533663357.118 [ThrusterServo] Loaded
2018-08-07T17:35:57.118Z,1533663357.118 [ComponentRegistry](DEBUG): SyncComponent "ThrusterServo" handled in the control thread.
2018-08-07T17:35:57.118Z,1533663357.118 [Module Loader](DEBUG): Loaded Module: Servo (This is the module containing motor controllers)
2018-08-07T17:35:57.119Z,1533663357.119 [Module Loader](DEBUG): Loading Module at Modules/Navigation.so
2018-08-07T17:35:57.246Z,1533663357.246 [DeadReckonUsingSpeedCalculator] Loaded
2018-08-07T17:35:57.246Z,1533663357.246 [ComponentRegistry](DEBUG): SyncComponent "DeadReckonUsingSpeedCalculator" handled in the control thread.
2018-08-07T17:35:57.284Z,1533663357.284 [NavChart] Loaded
2018-08-07T17:35:57.284Z,1533663357.284 [ComponentRegistry](DEBUG): SyncComponent "NavChart" handled in the control thread.
2018-08-07T17:35:57.288Z,1533663357.288 [UniversalFixResidualReporter] Loaded
2018-08-07T17:35:57.288Z,1533663357.288 [ComponentRegistry](DEBUG): SyncComponent "UniversalFixResidualReporter" handled in the control thread.
2018-08-07T17:35:57.289Z,1533663357.289 [Module Loader](DEBUG): Loaded Module: Navigation (Contains the base navigation components)
2018-08-07T17:35:57.321Z,1533663357.321 [ComponentRegistry](DEBUG): SyncComponent "MissionManager" handled in the control thread.
2018-08-07T17:35:57.322Z,1533663357.322 [ComponentRegistry](DEBUG): SyncComponent "Reporter" handled in the control thread.
2018-08-07T17:35:57.328Z,1533663357.328 [ComponentRegistry](DEBUG): Component "NavChartDb" handled in its own thread.
2018-08-07T17:35:57.331Z,1533663357.331 [NavChartDb ThreadHandler](DEBUG): Created PCaller Thread at 40A344E0
2018-08-07T17:35:57.331Z,1533663357.331 [NavChartDb ThreadHandler](INFO): Protected caller Thread ID is 886
2018-08-07T17:35:57.336Z,1533663357.336 [Supervisor](INFO): Main Thread ID is 796
2018-08-07T17:35:57.336Z,1533663357.336 [Supervisor](DEBUG): Running supervisor.
2018-08-07T17:35:57.337Z,1533663357.337 [CommandLine ThreadHandler](INFO): Handler Thread ID is 887
2018-08-07T17:35:57.339Z,1533663357.339 [controlThread ThreadHandler](INFO): Handler Thread ID is 888
2018-08-07T17:35:57.340Z,1533663357.340 [controlThread](DEBUG): Initializing ControlThread
2018-08-07T17:35:57.341Z,1533663357.341 [DepthRateCalculator](DEBUG): Initializing DepthRateCalculator.
2018-08-07T17:35:57.341Z,1533663357.341 [PitchRateCalculator](DEBUG): Initializing PitchRateCalculator.
2018-08-07T17:35:57.341Z,1533663357.341 [SpeedCalculator](DEBUG): Initializing SpeedCalculator.
2018-08-07T17:35:57.342Z,1533663357.342 [TempGradientCalculator](DEBUG): Initializing TempGradientCalculator.
2018-08-07T17:35:57.342Z,1533663357.342 [VerticalTemperatureHomogeneityIndexCalculator](DEBUG): (re)initializing
2018-08-07T17:35:57.343Z,1533663357.343 [YawRateCalculator](DEBUG): Initializing YawRateCalculator.
2018-08-07T17:35:57.343Z,1533663357.343 [ElevatorOffsetCalculator](DEBUG): Initializing ElevatorOffsetCalculator.
2018-08-07T17:35:57.347Z,1533663357.347 [SBIT](INFO): Initialize SBIT Component.
2018-08-07T17:35:57.348Z,1533663357.348 [SBIT](IMPORTANT): git: 2018-08-02
2018-08-07T17:35:57.348Z,1533663357.348 [SBIT](INFO): git hash: a37a29b3b88c2baef524c6f67edc8ac6c2d1982d
2018-08-07T17:35:57.349Z,1533663357.349 [SBIT](IMPORTANT): Kernel Release: 2.6.27.8
2018-08-07T17:35:57.350Z,1533663357.350 [SBIT](INFO): Kernel Reporting Different Version From Configuration.
Kernel Expected: #639 PREEMPT Wed Mar 12 12:53:33 PDT 2014
Kernel Reported: #2 PREEMPT Thu Jan 11 20:13:48 PST 2018
2018-08-07T17:35:57.351Z,1533663357.351 [SBIT](INFO): Beginning SBIT in 48.000000 seconds.
2018-08-07T17:35:57.351Z,1533663357.351 [IBIT](INFO): Initialize IBIT Component.
2018-08-07T17:35:57.352Z,1533663357.352 [CBIT](DEBUG): Initialize CBIT Component.
2018-08-07T17:35:57.353Z,1533663357.353 [CBIT](INFO): Last reboot was NOT due to watchdog timer.
2018-08-07T17:35:57.354Z,1533663357.354 [logger ThreadHandler](INFO): Handler Thread ID is 889
2018-08-07T17:35:57.373Z,1533663357.373 [Radio_Surface ThreadHandler](INFO): Handler Thread ID is 890
2018-08-07T17:35:57.379Z,1533663357.379 [Radio_Surface](INFO): Powering up
2018-08-07T17:35:57.385Z,1533663357.385 [CTD_Seabird ThreadHandler](INFO): Handler Thread ID is 891
2018-08-07T17:35:57.386Z,1533663357.386 [CTD_Seabird](INFO): Initializing
2018-08-07T17:35:57.386Z,1533663357.386 [CTD_Seabird](INFO): Checking LCM
2018-08-07T17:35:57.469Z,1533663357.469 [VerticalControl](DEBUG): Initialize VerticalControlComponent.
2018-08-07T17:35:57.471Z,1533663357.471 [HorizontalControl](DEBUG): Initialize HorizontalControlComponent.
2018-08-07T17:35:57.472Z,1533663357.472 [SpeedControl](DEBUG): Initialize SpeedControlComponent.
2018-08-07T17:35:57.472Z,1533663357.472 [LoopControl](DEBUG): Initialize LoopControlComponent.
2018-08-07T17:35:57.478Z,1533663357.478 [DeadReckonUsingSpeedCalculator](DEBUG): Initializing DeadReckonUsingSpeedCalculator component.
2018-08-07T17:35:57.479Z,1533663357.479 [DeadReckonUsingSpeedCalculator](INFO): Will consider orientation measurement stale after 120s.
2018-08-07T17:35:57.498Z,1533663357.498 [DeadReckonUsingSpeedCalculator](INFO): Will consider velocity measurement stale after 20s.
2018-08-07T17:35:57.499Z,1533663357.499 [NavChart](DEBUG): Initialize NavChart Navigation.
2018-08-07T17:35:57.499Z,1533663357.499 [UniversalFixResidualReporter](DEBUG): Initializing UniversalFixResidualReporter component.
2018-08-07T17:35:57.500Z,1533663357.500 [MissionManager](INFO): Loading Mission: Missions/Startup.xml
2018-08-07T17:35:57.511Z,1533663357.511 [WetLabsBB2FL ThreadHandler](INFO): Handler Thread ID is 892
2018-08-07T17:35:57.512Z,1533663357.512 [WetLabsBB2FL](INFO): Powering down
2018-08-07T17:35:57.651Z,1533663357.651 [WetLabsSeaOWL_UV_A ThreadHandler](INFO): Handler Thread ID is 893
2018-08-07T17:35:57.717Z,1533663357.717 [NavChartDb ThreadHandler](INFO): Handler Thread ID is 894
2018-08-07T17:35:57.720Z,1533663357.720 [Startup:A.GoToSurface](DEBUG): Construct GoToSurface.
2018-08-07T17:35:57.726Z,1533663357.726 [NavChartDb](INFO): Looking for Electronic Nav Chart file at: Resources/ElectronicNavigationCharts/US1WC07M.000
2018-08-07T17:35:57.727Z,1533663357.727 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US1WC07M.000
2018-08-07T17:35:57.727Z,1533663357.727 [NavChartDb](INFO): Looking for Electronic Nav Chart file at: Resources/ElectronicNavigationCharts/US2WC11M.000
2018-08-07T17:35:57.727Z,1533663357.727 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US2WC11M.000
2018-08-07T17:35:57.727Z,1533663357.727 [NavChartDb](INFO): Looking for Electronic Nav Chart file at: Resources/ElectronicNavigationCharts/US3CA52M.000
2018-08-07T17:35:57.727Z,1533663357.727 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US3CA52M.000
2018-08-07T17:35:57.727Z,1533663357.727 [NavChartDb](INFO): Looking for Electronic Nav Chart file at: Resources/ElectronicNavigationCharts/US4CA60M.000
2018-08-07T17:35:57.728Z,1533663357.728 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US4CA60M.000
2018-08-07T17:35:57.728Z,1533663357.728 [NavChartDb](INFO): Looking for Electronic Nav Chart file at: Resources/ElectronicNavigationCharts/US5CA50M.000
2018-08-07T17:35:57.728Z,1533663357.728 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA50M.000
2018-08-07T17:35:57.728Z,1533663357.728 [NavChartDb](INFO): Looking for Electronic Nav Chart file at: Resources/ElectronicNavigationCharts/US5CA61M.000
2018-08-07T17:35:57.728Z,1533663357.728 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA61M.000
2018-08-07T17:35:57.729Z,1533663357.729 [NavChartDb](INFO): Looking for Electronic Nav Chart file at: Resources/ElectronicNavigationCharts/US5CA62M.000
2018-08-07T17:35:57.729Z,1533663357.729 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA62M.000
2018-08-07T17:35:57.729Z,1533663357.729 [NavChartDb](INFO): Looking for Electronic Nav Chart file at: Resources/ElectronicNavigationCharts/US5CA83M.000
2018-08-07T17:35:57.729Z,1533663357.729 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA83M.000
2018-08-07T17:35:57.824Z,1533663357.824 [MissionManager](DEBUG): 
<?xml version="1.0" encoding="UTF-8"?>
<Mission xmlns="Tethys"
       xmlns:Control="Tethys/Control"
       xmlns:Guidance="Tethys/Guidance" 
       xmlns:Units="Tethys/Units"
       xmlns:Universal="Tethys/Universal"
       xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
       xsi:schemaLocation="Tethys http://okeanids.mbari.org/tethys/Xml/Tethys.xsd
                           Tethys/Control http://okeanids.mbari.org/tethys/Xml/Control.xsd
                           Tethys/Guidance http://okeanids.mbari.org/tethys/Xml/Guidance.xsd
                           Tethys/Units http://okeanids.mbari.org/tethys/Xml/Units.xsd
                           Tethys/Universal http://okeanids.mbari.org/tethys/Xml/Universal.xsd"
       Id="Startup">

    <Guidance:GoToSurface>
        <Progression/>
    </Guidance:GoToSurface>

    <Aggregate Id="StartupSatComms">

        <Sequence/>

        <ReadDatum>
            <Timeout Duration="P1M" />
            <Universal:latitude_fix/>
        </ReadDatum>

        <ReadDatum>
            <Timeout Duration="P1M" />
            <Universal:platform_communications/>
        </ReadDatum>

    </Aggregate>

</Mission>


2018-08-07T17:35:57.825Z,1533663357.825 [MissionManager](INFO): Loading Mission: Missions/Default.xml
2018-08-07T17:35:57.829Z,1533663357.829 [CTD_Seabird](INFO): LCM OK
2018-08-07T17:35:57.829Z,1533663357.829 [CTD_Seabird](INFO): Powering up
2018-08-07T17:35:57.947Z,1533663357.947 [MissionManager](INFO): DefineArg Default.ElapsedSinceDefaultStarted = 0.000000 min
2018-08-07T17:35:57.949Z,1533663357.949 [Default:A.Wait](DEBUG): Construct Wait.
2018-08-07T17:35:57.951Z,1533663357.951 [Default:B.GoToSurface](DEBUG): Construct GoToSurface.
2018-08-07T17:35:57.999Z,1533663357.999 [Default:CheckIn:Read_Iridium:A_Timeout:A.Execute](DEBUG): Construct Execute.
2018-08-07T17:35:58.014Z,1533663358.014 [Default:CheckIn:C.Wait](DEBUG): Construct Wait.
2018-08-07T17:35:58.038Z,1533663358.038 [Default:E.Execute](DEBUG): Construct Execute.
2018-08-07T17:35:58.042Z,1533663358.042 [MissionManager](DEBUG): 
<?xml version="1.0" encoding="UTF-8"?>
<Mission xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
         xmlns="Tethys"
         xmlns:Units="Tethys/Units"
         xmlns:Guidance="Tethys/Guidance"
         xmlns:Universal="Tethys/Universal"
         xsi:schemaLocation="Tethys http://okeanids.mbari.org/tethys/Xml/Tethys.xsd
                             Tethys/Units http://okeanids.mbari.org/tethys/Xml/Units.xsd
                             Tethys/Guidance http://okeanids.mbari.org/tethys/Xml/Guidance.xsd
                             Tethys/Universal http://okeanids.mbari.org/tethys/Xml/Universal.xsd"
         Id="Default">

    <DefineArg Name="ElapsedSinceDefaultStarted"><Units:minute/><Value>0</Value></DefineArg>

    <Guidance:Wait>
        <Description>
            Wait a moment to see if the scheduler starts a new mission before
            starting to actually run Default.
        </Description>
        <Sequence/>
        <Setting><Guidance:Wait.duration/><Units:second/><Value>13</Value></Setting>
    </Guidance:Wait>

    <Guidance:GoToSurface>
        <Progression/>
    </Guidance:GoToSurface>

    <Aggregate Id="CheckIn">

        <Sequence Repeat="288"/>

        <ReadDatum Id="Read_GPS">
            <Timeout Duration="P5M"/>
            <Universal:time_fix/>
        </ReadDatum>

        <ReadDatum Id="Read_Iridium">
            <Timeout Duration="P2H">
                <Guidance:Execute>
                    <Sequence/>
                    <Setting><Guidance:Execute.command/><String>Burn 300</String></Setting>
                </Guidance:Execute>
                <Syslog Severity="Critical">Dropped weight due to communications timeout.</Syslog>
            </Timeout>
            <Universal:platform_communications/>
        </ReadDatum>

        <Guidance:Wait>
            <Sequence/>
            <Setting><Guidance:Wait.duration/><Units:minute/><Value>5</Value></Setting>
        </Guidance:Wait>

        <Assign><Sequence/><Arg Name="ElapsedSinceDefaultStarted"/><Elapsed><Universal:mission_started/></Elapsed></Assign>

        <Syslog Severity="Important">Default mission has been running for <Arg Name="ElapsedSinceDefaultStarted"/><Units:minute/></Syslog>

    </Aggregate>

    <Syslog Severity="Important">Restarting logs and Default mission.</Syslog>

    <Guidance:Execute>
        <Sequence/>
        <Setting><Guidance:Execute.command/><String>restart logs</String></Setting>
    </Guidance:Execute>

</Mission>


2018-08-07T17:35:58.047Z,1533663358.047 [controlThread](DEBUG): Component order: CycleStarter,AcousticModem_Benthos_ATM900,DataOverHttps,Depth_Keller,DropWeight,NAL9602,Onboard,PNI_TCM,BPC1,Aanderaa_O2,ESPComponent,PAR_Licor,Depth_Keller,PAR_Licor,DepthRateCalculator,PitchRateCalculator,SpeedCalculator,TempGradientCalculator,VerticalTemperatureHomogeneityIndexCalculator,YawRateCalculator,ElevatorOffsetCalculator,StratificationFrontDetector,DeadReckonUsingSpeedCalculator,NavChart,UniversalFixResidualReporter,MissionManager,VerticalControl,HorizontalControl,SpeedControl,LoopControl,BuoyancyServo,ElevatorServo,MassServo,RudderServo,ThrusterServo,SBIT,IBIT,CBIT,Reporter,LogSplitter,
2018-08-07T17:35:58.072Z,1533663358.072 [AcousticModem_Benthos_ATM900](INFO): Powering up
2018-08-07T17:35:58.072Z,1533663358.072 [AcousticModem_Benthos_ATM900](DEBUG): Initializing AcousticModem_Benthos_ATM900.
2018-08-07T17:35:58.102Z,1533663358.102 [DataOverHttps](DEBUG): dashIP=134.89.2.23 starts with a digit so assuming it is a numeric IP
2018-08-07T17:35:58.511Z,1533663358.511 [ESPComponent](INFO): powering down ESP
2018-08-07T17:35:58.941Z,1533663358.941 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2018-08-07T17:35:59.123Z,1533663359.123 [BuoyancyServo](DEBUG): Initializing EZServoServo.
2018-08-07T17:35:59.129Z,1533663359.129 [BuoyancyServo](DEBUG): Initializing BuoyancyServo.
2018-08-07T17:35:59.152Z,1533663359.152 [ElevatorServo](DEBUG): Initializing EZServoServo.
2018-08-07T17:35:59.157Z,1533663359.157 [ElevatorServo](DEBUG): Initializing ElevatorServo.
2018-08-07T17:35:59.172Z,1533663359.172 [MassServo](DEBUG): Initializing EZServoServo.
2018-08-07T17:35:59.177Z,1533663359.177 [MassServo](DEBUG): Initializing MassServo.
2018-08-07T17:35:59.193Z,1533663359.193 [RudderServo](DEBUG): Initializing EZServoServo.
2018-08-07T17:35:59.201Z,1533663359.201 [RudderServo](DEBUG): Initializing RudderServo.
2018-08-07T17:35:59.223Z,1533663359.223 [ThrusterServo](DEBUG): Initializing EZServoServo.
2018-08-07T17:35:59.238Z,1533663359.238 [ThrusterServo](DEBUG): Initializing ThrusterServo.
2018-08-07T17:35:59.568Z,1533663359.568 [DropWeight](CRITICAL): DROP WEIGHT MISSING.

2018-08-07T17:35:59.568Z,1533663359.568 [DropWeight] Hardware Fault, FailCount= 1
2018-08-07T17:35:59.568Z,1533663359.568 [DropWeight](ERROR): Hardware Fault
2018-08-07T17:35:59.641Z,1533663359.641 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2018-08-07T17:35:59.993Z,1533663359.993 [BuoyancyServo](ERROR): Buoyancy initialization uart error serial timeout
2018-08-07T17:35:59.993Z,1533663359.993 [BuoyancyServo](FAULT): Buoyancy failed to initialize
2018-08-07T17:35:59.993Z,1533663359.993 [BuoyancyServo] Communications Fault, FailCount= 1
2018-08-07T17:35:59.993Z,1533663359.993 [BuoyancyServo](ERROR): Communications Fault
2018-08-07T17:36:00.262Z,1533663360.262 [CommandLine](FAULT): Scheduling is paused
2018-08-07T17:36:00.263Z,1533663360.263 [CBIT](INFO): Critical error at 20180807T173559
2018-08-07T17:36:00.263Z,1533663360.263 [Supervisor](INFO): Stop Mission called by CBIT::checkCriticals
2018-08-07T17:36:00.266Z,1533663360.266 [CBIT](ERROR): Hardware Fault in component: DropWeight
2018-08-07T17:36:00.266Z,1533663360.266 [CBIT](CRITICAL): Hardware Fault in component: DropWeight
2018-08-07T17:36:00.267Z,1533663360.267 [CBIT](ERROR): Communications Fault in component: BuoyancyServo
2018-08-07T17:36:00.333Z,1533663360.333 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2018-08-07T17:36:00.354Z,1533663360.354 [BuoyancyServo](DEBUG): Uninitialize Buoyancy Servo.
2018-08-07T17:36:00.354Z,1533663360.354 [BuoyancyServo](INFO): Powering down
2018-08-07T17:36:00.440Z,1533663360.440 [CBIT](INFO): Critical error at 20180807T173600
2018-08-07T17:36:00.723Z,1533663360.723 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2018-08-07T17:36:01.147Z,1533663361.147 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2018-08-07T17:36:01.522Z,1533663361.522 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2018-08-07T17:36:01.713Z,1533663361.713 [NavChartDb](FAULT): Failed to read data from Data/navchart/soundings.mtx
2018-08-07T17:36:01.950Z,1533663361.950 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2018-08-07T17:36:02.346Z,1533663362.346 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2018-08-07T17:36:02.470Z,1533663362.470 [CBIT](INFO): Clearing failed state for component BuoyancyServo
2018-08-07T17:36:02.470Z,1533663362.470 [BuoyancyServo] No Fault, FailCount= 1
2018-08-07T17:36:02.736Z,1533663362.736 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2018-08-07T17:36:02.790Z,1533663362.790 [BuoyancyServo](DEBUG): Initializing EZServoServo.
2018-08-07T17:36:02.790Z,1533663362.790 [BuoyancyServo](DEBUG): Initializing BuoyancyServo.
2018-08-07T17:36:02.949Z,1533663362.949 [CTD_Seabird](INFO): Stopping potential previous instance(s) of CTD_Seabird LCM interface
2018-08-07T17:36:03.032Z,1533663363.032 [CTD_Seabird](INFO): Started Seabird LCM interface with command:nohup ./lrauv-framework/onboard/bin/gpctd -ldir /mnt/mmc/LRAUV/Logs/latest/ -dev /dev/ttyC6 -b 9600 >& /dev/null &
2018-08-07T17:36:03.199Z,1533663363.199 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2018-08-07T17:36:03.233Z,1533663363.233 [CTD_Seabird](INFO): LCM subscribed to channel:ctd_t.seabird-gpctd
2018-08-07T17:36:03.638Z,1533663363.638 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2018-08-07T17:36:03.889Z,1533663363.889 [CTD_Seabird](INFO): Stopping potential previous instance(s) of CTD_Seabird LCM interface
2018-08-07T17:36:03.889Z,1533663363.889 [CTD_Seabird](INFO): Powering down
2018-08-07T17:36:03.967Z,1533663363.967 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2018-08-07T17:36:04.383Z,1533663364.383 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2018-08-07T17:36:04.798Z,1533663364.798 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2018-08-07T17:36:05.191Z,1533663365.191 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2018-08-07T17:36:05.587Z,1533663365.587 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2018-08-07T17:36:05.930Z,1533663365.930 [AcousticModem_Benthos_ATM900](DEBUG): 
2018-08-07T17:36:05.962Z,1533663365.962 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2018-08-07T17:36:06.224Z,1533663366.224 [NavChartDb](INFO): Creating index for soundings
2018-08-07T17:36:06.352Z,1533663366.352 [PNI_TCM](FAULT): Failed to set parameters during initialization.
2018-08-07T17:36:06.352Z,1533663366.352 [PNI_TCM] Data Fault, FailCount= 1
2018-08-07T17:36:06.352Z,1533663366.352 [PNI_TCM](ERROR): Data Fault
2018-08-07T17:36:06.406Z,1533663366.406 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2018-08-07T17:36:06.578Z,1533663366.578 [CBIT](ERROR): Data Fault in component: PNI_TCM
2018-08-07T17:36:06.752Z,1533663366.752 [PNI_TCM](INFO): Powering down
2018-08-07T17:36:06.915Z,1533663366.915 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2018-08-07T17:36:07.131Z,1533663367.131 [AcousticModem_Benthos_ATM900](DEBUG): Teledyne Benthos ATM-900 Series OEM w/burn wire
2018-08-07T17:36:07.132Z,1533663367.132 [AcousticModem_Benthos_ATM900](DEBUG): MF Frequency Band
2018-08-07T17:36:07.134Z,1533663367.134 [AcousticModem_Benthos_ATM900](DEBUG): Standard version 8.6.3
2018-08-07T17:36:07.134Z,1533663367.134 [AcousticModem_Benthos_ATM900](DEBUG): Jan  5 2000 15:26:30 
2018-08-07T17:36:07.183Z,1533663367.183 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2018-08-07T17:36:07.531Z,1533663367.531 [AcousticModem_Benthos_ATM900](DEBUG): WARNING: battery low
2018-08-07T17:36:07.578Z,1533663367.578 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2018-08-07T17:36:07.991Z,1533663367.991 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2018-08-07T17:36:08.046Z,1533663368.046 [CBIT](INFO): Clearing failed state for component PNI_TCM
2018-08-07T17:36:08.046Z,1533663368.046 [PNI_TCM] No Fault, FailCount= 1
2018-08-07T17:36:08.330Z,1533663368.330 [AcousticModem_Benthos_ATM900](INFO): entering command mode
2018-08-07T17:36:08.414Z,1533663368.414 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2018-08-07T17:36:08.730Z,1533663368.730 [AcousticModem_Benthos_ATM900](DEBUG): checking for command mode acknowledgment
2018-08-07T17:36:08.731Z,1533663368.731 [AcousticModem_Benthos_ATM900](DEBUG): read user prompt 1: user:1>
2018-08-07T17:36:08.731Z,1533663368.731 [AcousticModem_Benthos_ATM900](INFO): command mode acknowledged
2018-08-07T17:36:08.751Z,1533663368.751 [Aanderaa_O2](FAULT): Timed out starting
2018-08-07T17:36:08.752Z,1533663368.752 [Aanderaa_O2] Communications Fault, FailCount= 1
2018-08-07T17:36:08.752Z,1533663368.752 [Aanderaa_O2](ERROR): Communications Fault
2018-08-07T17:36:08.806Z,1533663368.806 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2018-08-07T17:36:08.850Z,1533663368.850 [CBIT](ERROR): Communications Fault in component: Aanderaa_O2
2018-08-07T17:36:09.130Z,1533663369.130 [AcousticModem_Benthos_ATM900](INFO): setting local address to 3
2018-08-07T17:36:09.305Z,1533663369.305 [Aanderaa_O2](INFO): Powering down
2018-08-07T17:36:09.430Z,1533663369.430 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2018-08-07T17:36:09.530Z,1533663369.530 [AcousticModem_Benthos_ATM900](DEBUG): checking for local address setting acknowledgment
2018-08-07T17:36:09.531Z,1533663369.531 [AcousticModem_Benthos_ATM900](INFO): set local address to 3
2018-08-07T17:36:09.579Z,1533663369.579 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2018-08-07T17:36:09.931Z,1533663369.931 [AcousticModem_Benthos_ATM900](DEBUG): read user prompt 2: user:2>
2018-08-07T17:36:09.977Z,1533663369.977 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2018-08-07T17:36:10.030Z,1533663370.030 [CBIT](INFO): Clearing failed state for component Aanderaa_O2
2018-08-07T17:36:10.030Z,1533663370.030 [Aanderaa_O2] No Fault, FailCount= 1
2018-08-07T17:36:10.404Z,1533663370.404 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2018-08-07T17:36:10.814Z,1533663370.814 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2018-08-07T17:36:11.179Z,1533663371.179 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2018-08-07T17:36:11.585Z,1533663371.585 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2018-08-07T17:36:12.011Z,1533663372.011 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2018-08-07T17:36:12.394Z,1533663372.394 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2018-08-07T17:36:12.778Z,1533663372.778 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2018-08-07T17:36:13.178Z,1533663373.178 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2018-08-07T17:36:13.583Z,1533663373.583 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2018-08-07T17:36:14.003Z,1533663374.003 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2018-08-07T17:36:14.398Z,1533663374.398 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2018-08-07T17:36:14.803Z,1533663374.803 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2018-08-07T17:36:15.179Z,1533663375.179 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2018-08-07T17:36:15.551Z,1533663375.551 [PNI_TCM](FAULT): Failed to set parameters during initialization.
2018-08-07T17:36:15.551Z,1533663375.551 [PNI_TCM] Data Fault, FailCount= 2
2018-08-07T17:36:15.551Z,1533663375.551 [PNI_TCM](ERROR): Data Fault
2018-08-07T17:36:15.583Z,1533663375.583 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2018-08-07T17:36:15.634Z,1533663375.634 [CBIT](ERROR): Data Fault in component: PNI_TCM
2018-08-07T17:36:15.958Z,1533663375.958 [PNI_TCM](INFO): Powering down
2018-08-07T17:36:16.010Z,1533663376.010 [CommandLine](IMPORTANT): got command quit
2018-08-07T17:36:16.078Z,1533663376.078 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2018-08-07T17:36:16.390Z,1533663376.390 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2018-08-07T17:36:16.794Z,1533663376.794 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2018-08-07T17:36:17.020Z,1533663377.020 [CommandLine ThreadHandler](INFO): Uninitializing protected caller thread.
2018-08-07T17:36:17.020Z,1533663377.020 [CommandLine ThreadHandler](INFO): Thread cancelled.
2018-08-07T17:36:17.149Z,1533663377.149 [Supervisor](DEBUG): Uninitializing supervisor and starting cleanup.  Bye!
2018-08-07T17:36:17.149Z,1533663377.149 [CommandLine ThreadHandler](INFO): Thread cancelled.
2018-08-07T17:36:17.150Z,1533663377.150 [CommandLine](INFO): Join timeout helper Thread ID is 912
2018-08-07T17:36:17.150Z,1533663377.150 [ComponentRegistry](INFO): Shutting down NavChartDb ThreadHandler
2018-08-07T17:36:17.157Z,1533663377.157 [NavChartDb ThreadHandler](INFO): Thread cancelled.
2018-08-07T17:36:17.157Z,1533663377.157 [NavChartDb](INFO): Join timeout helper Thread ID is 913
2018-08-07T17:36:17.176Z,1533663377.176 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2018-08-07T17:36:17.282Z,1533663377.282 [CBIT](INFO): Clearing failed state for component PNI_TCM
2018-08-07T17:36:17.283Z,1533663377.283 [PNI_TCM] No Fault, FailCount= 2
2018-08-07T17:36:17.591Z,1533663377.591 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2018-08-07T17:36:17.986Z,1533663377.986 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2018-08-07T17:36:18.383Z,1533663378.383 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2018-08-07T17:36:18.782Z,1533663378.782 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2018-08-07T17:36:19.178Z,1533663379.178 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2018-08-07T17:36:19.594Z,1533663379.594 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2018-08-07T17:36:19.979Z,1533663379.979 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2018-08-07T17:36:20.402Z,1533663380.402 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2018-08-07T17:36:20.753Z,1533663380.753 [Aanderaa_O2](FAULT): Timed out starting
2018-08-07T17:36:20.753Z,1533663380.753 [Aanderaa_O2] Communications Fault, FailCount= 2
2018-08-07T17:36:20.753Z,1533663380.753 [Aanderaa_O2](ERROR): Communications Fault
2018-08-07T17:36:20.764Z,1533663380.764 [NavChartDb ThreadHandler](INFO): Uninitializing protected caller thread.
2018-08-07T17:36:20.764Z,1533663380.764 [NavChartDb ThreadHandler](INFO): Thread cancelled.
2018-08-07T17:36:20.774Z,1533663380.774 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2018-08-07T17:36:20.781Z,1533663380.781 [ComponentRegistry](INFO): Shutting down WetLabsSeaOWL_UV_A ThreadHandler
2018-08-07T17:36:20.781Z,1533663380.781 [WetLabsSeaOWL_UV_A ThreadHandler](INFO): Thread cancelled.
2018-08-07T17:36:20.781Z,1533663380.781 [WetLabsSeaOWL_UV_A](INFO): Join timeout helper Thread ID is 915
2018-08-07T17:36:20.801Z,1533663380.801 [WetLabsSeaOWL_UV_A ThreadHandler](INFO): Uninitializing protected caller thread.
2018-08-07T17:36:20.801Z,1533663380.801 [WetLabsSeaOWL_UV_A ThreadHandler](INFO): Thread cancelled.
2018-08-07T17:36:20.813Z,1533663380.813 [ComponentRegistry](INFO): Shutting down WetLabsBB2FL ThreadHandler
2018-08-07T17:36:20.813Z,1533663380.813 [WetLabsBB2FL ThreadHandler](INFO): Thread cancelled.
2018-08-07T17:36:20.814Z,1533663380.814 [WetLabsBB2FL](INFO): Join timeout helper Thread ID is 916
2018-08-07T17:36:20.831Z,1533663380.831 [CBIT](ERROR): Communications Fault in component: Aanderaa_O2
2018-08-07T17:36:20.997Z,1533663380.997 [WetLabsBB2FL ThreadHandler](INFO): Uninitializing protected caller thread.
2018-08-07T17:36:20.997Z,1533663380.997 [WetLabsBB2FL](INFO): Powering down
2018-08-07T17:36:20.998Z,1533663380.998 [WetLabsBB2FL ThreadHandler](INFO): Thread cancelled.
2018-08-07T17:36:21.013Z,1533663381.013 [ComponentRegistry](INFO): Shutting down CTD_Seabird ThreadHandler
2018-08-07T17:36:21.013Z,1533663381.013 [CTD_Seabird ThreadHandler](INFO): Thread cancelled.
2018-08-07T17:36:21.013Z,1533663381.013 [CTD_Seabird](INFO): Join timeout helper Thread ID is 917
2018-08-07T17:36:21.269Z,1533663381.269 [Aanderaa_O2](INFO): Powering down
2018-08-07T17:36:21.284Z,1533663381.284 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2018-08-07T17:36:21.301Z,1533663381.301 [CTD_Seabird ThreadHandler](INFO): Uninitializing protected caller thread.
2018-08-07T17:36:21.494Z,1533663381.494 [CTD_Seabird](INFO): Stopping potential previous instance(s) of CTD_Seabird LCM interface
2018-08-07T17:36:21.494Z,1533663381.494 [CTD_Seabird](INFO): Powering down
2018-08-07T17:36:21.495Z,1533663381.495 [CTD_Seabird ThreadHandler](INFO): Thread cancelled.
2018-08-07T17:36:21.510Z,1533663381.510 [ComponentRegistry](INFO): Shutting down Radio_Surface ThreadHandler
2018-08-07T17:36:21.510Z,1533663381.510 [Radio_Surface ThreadHandler](INFO): Thread cancelled.
2018-08-07T17:36:21.511Z,1533663381.511 [Radio_Surface](INFO): Join timeout helper Thread ID is 920
2018-08-07T17:36:21.579Z,1533663381.579 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2018-08-07T17:36:21.677Z,1533663381.677 [Radio_Surface ThreadHandler](INFO): Uninitializing protected caller thread.
2018-08-07T17:36:21.678Z,1533663381.678 [Radio_Surface ThreadHandler](INFO): Thread cancelled.
2018-08-07T17:36:21.698Z,1533663381.698 [ComponentRegistry](INFO): Shutting down logger ThreadHandler
2018-08-07T17:36:21.698Z,1533663381.698 [logger ThreadHandler](INFO): Thread cancelled.
2018-08-07T17:36:21.698Z,1533663381.698 [logger](INFO): Join timeout helper Thread ID is 921
2018-08-07T17:36:21.715Z,1533663381.715 [logger ThreadHandler](INFO): Uninitializing protected caller thread.
2018-08-07T17:36:21.715Z,1533663381.715 [logger ThreadHandler](INFO): Thread cancelled.
2018-08-07T17:36:21.730Z,1533663381.730 [ComponentRegistry](INFO): Shutting down CommandLine ThreadHandler
2018-08-07T17:36:21.730Z,1533663381.730 [CommandLine ThreadHandler](INFO): Thread cancelled.
2018-08-07T17:36:21.730Z,1533663381.730 [ComponentRegistry](INFO): Shutting down controlThread ThreadHandler
2018-08-07T17:36:21.730Z,1533663381.730 [controlThread ThreadHandler](INFO): Thread cancelled.
2018-08-07T17:36:21.730Z,1533663381.730 [controlThread](INFO): Join timeout helper Thread ID is 922
2018-08-07T17:36:21.925Z,1533663381.925 [controlThread ThreadHandler](INFO): Uninitializing protected caller thread.
2018-08-07T17:36:21.925Z,1533663381.925 [controlThread](DEBUG): Uninitializing ControlThread
2018-08-07T17:36:21.926Z,1533663381.926 [AcousticModem_Benthos_ATM900](INFO): Powering down
2018-08-07T17:36:22.046Z,1533663382.046 [NAL9602](INFO): Powering down
2018-08-07T17:36:22.068Z,1533663382.068 [PNI_TCM](INFO): Powering down
2018-08-07T17:36:22.158Z,1533663382.158 [Aanderaa_O2](INFO): Powering down
2018-08-07T17:36:22.161Z,1533663382.161 [DepthRateCalculator](DEBUG): Initializing DepthRateCalculator.
2018-08-07T17:36:22.162Z,1533663382.162 [ElevatorOffsetCalculator](DEBUG): Uninitializing ElevatorOffsetCalculator.
2018-08-07T17:36:22.163Z,1533663382.163 [NavChart](DEBUG): Uninitialize NavChart Navigation.
2018-08-07T17:36:22.163Z,1533663382.163 [MissionManager](INFO): Uninitializing Mission Default
2018-08-07T17:36:22.166Z,1533663382.166 [MissionManager](INFO): Uninitializing Mission Startup
2018-08-07T17:36:22.168Z,1533663382.168 [VerticalControl](DEBUG): Uninitialize VerticalControlComponent.
2018-08-07T17:36:22.168Z,1533663382.168 [HorizontalControl](DEBUG): Uninitialize HorizontalControlComponent.
2018-08-07T17:36:22.168Z,1533663382.168 [SpeedControl](DEBUG): Uninitialize SpeedControlComponent.
2018-08-07T17:36:22.169Z,1533663382.169 [LoopControl](DEBUG): Uninitialize LoopControlComponent.
2018-08-07T17:36:22.169Z,1533663382.169 [BuoyancyServo](DEBUG): Uninitialize Buoyancy Servo.
2018-08-07T17:36:22.169Z,1533663382.169 [BuoyancyServo](INFO): Powering down
2018-08-07T17:36:22.181Z,1533663382.181 [ElevatorServo](DEBUG): Uninitialize Elevator Servo.
2018-08-07T17:36:22.181Z,1533663382.181 [ElevatorServo](INFO): Powering down
2018-08-07T17:36:22.202Z,1533663382.202 [MassServo](DEBUG): Uninitialize Mass Servo.
2018-08-07T17:36:22.202Z,1533663382.202 [MassServo](INFO): Powering down
2018-08-07T17:36:22.203Z,1533663382.203 [RudderServo](DEBUG): Uninitialize Rudder Servo.
2018-08-07T17:36:22.204Z,1533663382.204 [RudderServo](INFO): Powering down
2018-08-07T17:36:22.205Z,1533663382.205 [ThrusterServo](DEBUG): Uninitialize Thruster Servo.
2018-08-07T17:36:22.205Z,1533663382.205 [ThrusterServo](INFO): Powering down
2018-08-07T17:36:22.206Z,1533663382.206 [SBIT](DEBUG): Uninitialize SBIT Component.
2018-08-07T17:36:22.206Z,1533663382.206 [IBIT](DEBUG): Uninitialize IBIT Component.
2018-08-07T17:36:22.206Z,1533663382.206 [CBIT](DEBUG): Uninitialize CBIT Component.
2018-08-07T17:36:22.207Z,1533663382.207 [controlThread ThreadHandler](INFO): Thread cancelled.
2018-08-07T17:36:22.298Z,1533663382.298 [Radio_Surface ThreadHandler](INFO): Thread cancelled.
2018-08-07T17:36:22.336Z,1533663382.336 [WetLabsSeaOWL_UV_A ThreadHandler](INFO): Thread cancelled.
2018-08-07T17:36:22.338Z,1533663382.338 [WetLabsBB2FL ThreadHandler](INFO): Thread cancelled.
2018-08-07T17:36:22.343Z,1533663382.343 [CTD_Seabird ThreadHandler](INFO): Thread cancelled.
2018-08-07T17:36:22.628Z,1533663382.628 [NavChartDb ThreadHandler](INFO): Thread cancelled.
2018-08-07T17:36:22.685Z,1533663382.685 [logger ThreadHandler](INFO): Thread cancelled.