2018-08-02T03:57:24.612Z,1533182244.612 [Supervisor](DEBUG): Initializing supervisor.
2018-08-02T03:57:24.615Z,1533182244.615 [SyncHandler](DEBUG): Created PCaller Thread at 404514E0
2018-08-02T03:57:24.615Z,1533182244.615 [SyncHandler](INFO): Protected caller Thread ID is 2229
2018-08-02T03:57:24.616Z,1533182244.616 [ComponentRegistry](DEBUG): Component "controlThread" handled in its own thread.
2018-08-02T03:57:24.617Z,1533182244.617 [controlThread ThreadHandler](DEBUG): Created PCaller Thread at 404814E0
2018-08-02T03:57:24.617Z,1533182244.617 [controlThread ThreadHandler](INFO): Protected caller Thread ID is 2230
2018-08-02T03:57:24.621Z,1533182244.621 [ComponentRegistry](DEBUG): SyncComponent "CycleStarter" handled in the control thread.
2018-08-02T03:57:24.633Z,1533182244.633 [ComponentRegistry](DEBUG): Component "CommandLine" handled in its own thread.
2018-08-02T03:57:24.634Z,1533182244.634 [CommandLine ThreadHandler](DEBUG): Created PCaller Thread at 404B14E0
2018-08-02T03:57:24.634Z,1533182244.634 [CommandLine ThreadHandler](INFO): Protected caller Thread ID is 2231
2018-08-02T03:57:24.635Z,1533182244.635 [ComponentRegistry](DEBUG): Component "logger" handled in its own thread.
2018-08-02T03:57:24.636Z,1533182244.636 [logger ThreadHandler](DEBUG): Created PCaller Thread at 404E14E0
2018-08-02T03:57:24.636Z,1533182244.636 [logger ThreadHandler](INFO): Protected caller Thread ID is 2232
2018-08-02T03:57:24.638Z,1533182244.638 [ComponentRegistry](DEBUG): SyncComponent "LogSplitter" handled in the control thread.
2018-08-02T03:57:24.639Z,1533182244.639 [Supervisor](INFO): Looking for Config files in directory: Config/
2018-08-02T03:57:24.640Z,1533182244.640 [Supervisor](INFO): Opening Config file at: Config/Sample.cfg
2018-08-02T03:57:24.803Z,1533182244.803 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Sample
2018-08-02T03:57:24.804Z,1533182244.804 [Supervisor](INFO): Opening Config file at: Config/workSite.cfg
2018-08-02T03:57:24.907Z,1533182244.907 [ComponentRegistry](DEBUG): Loaded Config Component "Config/workSite
2018-08-02T03:57:24.908Z,1533182244.908 [Supervisor](INFO): Opening Config file at: Config/logger.cfg
2018-08-02T03:57:25.117Z,1533182245.117 [ComponentRegistry](DEBUG): Loaded Config Component "Config/logger
2018-08-02T03:57:25.117Z,1533182245.117 [Supervisor](INFO): Opening Config file at: Config/Science.cfg
2018-08-02T03:57:25.454Z,1533182245.454 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Science
2018-08-02T03:57:25.454Z,1533182245.454 [Supervisor](INFO): Opening Config file at: Config/Control.cfg
2018-08-02T03:57:25.805Z,1533182245.805 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Control
2018-08-02T03:57:25.806Z,1533182245.806 [Supervisor](INFO): Opening Config file at: Config/Simulator.cfg
2018-08-02T03:57:26.284Z,1533182246.284 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Simulator
2018-08-02T03:57:26.285Z,1533182246.285 [Supervisor](INFO): Opening Config file at: Config/Sensor.cfg
2018-08-02T03:57:26.721Z,1533182246.721 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Sensor
2018-08-02T03:57:26.722Z,1533182246.722 [Supervisor](INFO): Opening Config file at: Config/vehicle.cfg
2018-08-02T03:57:27.259Z,1533182247.259 [ComponentRegistry](DEBUG): Loaded Config Component "Config/vehicle
2018-08-02T03:57:27.259Z,1533182247.259 [Supervisor](INFO): Opening Config file at: Config/Guidance.cfg
2018-08-02T03:57:28.028Z,1533182248.028 [Supervisor](INFO): Opening Config file at: Config/Servo.cfg
2018-08-02T03:57:28.341Z,1533182248.341 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Servo
2018-08-02T03:57:28.342Z,1533182248.342 [Supervisor](INFO): Opening Config file at: Config/Derivation.cfg
2018-08-02T03:57:28.491Z,1533182248.491 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Derivation
2018-08-02T03:57:28.491Z,1533182248.491 [Supervisor](INFO): Opening Config file at: Config/Navigation.cfg
2018-08-02T03:57:28.707Z,1533182248.707 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Navigation
2018-08-02T03:57:28.707Z,1533182248.707 [Supervisor](INFO): Opening Config file at: Config/BIT.cfg
2018-08-02T03:57:28.926Z,1533182248.926 [ComponentRegistry](DEBUG): Loaded Config Component "Config/BIT
2018-08-02T03:57:28.926Z,1533182248.926 [Supervisor](INFO): Opening Config file at: Config/secure.cfg
2018-08-02T03:57:29.027Z,1533182249.027 [ComponentRegistry](DEBUG): Loaded Config Component "Config/secure
2018-08-02T03:57:29.028Z,1533182249.028 [Supervisor](INFO): Opening Config file at: Config/Estimation.cfg
2018-08-02T03:57:29.174Z,1533182249.174 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Estimation
2018-08-02T03:57:29.176Z,1533182249.176 [Supervisor](INFO): Looking for Config files in directory: Config/lrauv-makai/
2018-08-02T03:57:29.177Z,1533182249.177 [Supervisor](INFO): Opening Config file at: Config/lrauv-makai/Battery.cfg
2018-08-02T03:57:29.415Z,1533182249.415 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Battery
2018-08-02T03:57:29.416Z,1533182249.416 [Supervisor](INFO): Opening Config file at: Config/lrauv-makai/logger.cfg
2018-08-02T03:57:29.524Z,1533182249.524 [Supervisor](INFO): Opening Config file at: Config/lrauv-makai/Science.cfg
2018-08-02T03:57:29.671Z,1533182249.671 [Supervisor](INFO): Opening Config file at: Config/lrauv-makai/Control.cfg
2018-08-02T03:57:29.766Z,1533182249.766 [Supervisor](INFO): Opening Config file at: Config/lrauv-makai/Simulator.cfg
2018-08-02T03:57:29.853Z,1533182249.853 [Supervisor](INFO): Opening Config file at: Config/lrauv-makai/Sensor.cfg
2018-08-02T03:57:30.000Z,1533182250.000 [Supervisor](INFO): Opening Config file at: Config/lrauv-makai/vehicle.cfg
2018-08-02T03:57:30.186Z,1533182250.186 [Supervisor](INFO): Opening Config file at: Config/lrauv-makai/Servo.cfg
2018-08-02T03:57:30.286Z,1533182250.286 [Supervisor](INFO): Opening Config file at: Config/lrauv-makai/Navigation.cfg
2018-08-02T03:57:30.383Z,1533182250.383 [Supervisor](INFO): Opening Config file at: Config/lrauv-makai/BIT.cfg
2018-08-02T03:57:30.483Z,1533182250.483 [Supervisor](INFO): Opening Config file at: Config/lrauv-makai/secure.cfg
2018-08-02T03:57:30.567Z,1533182250.567 [Supervisor](IMPORTANT): Reading configuration overrides from Data/persisted.cfg
2018-08-02T03:57:30.577Z,1533182250.577 [Module Loader](DEBUG): Loading Module at Modules/Simulator.so
2018-08-02T03:57:30.704Z,1533182250.704 [Module Loader](DEBUG): Loaded Module: Simulator (This is the module containing the Simulator)
2018-08-02T03:57:30.705Z,1533182250.705 [Module Loader](DEBUG): Loading Module at Modules/Sample.so
2018-08-02T03:57:30.729Z,1533182250.729 [Module Loader](DEBUG): Loaded Module: Sample (This is a Sample Module of Sample Components)
2018-08-02T03:57:30.730Z,1533182250.730 [Module Loader](DEBUG): Loading Module at Modules/Derivation.so
2018-08-02T03:57:30.786Z,1533182250.786 [DepthRateCalculator] Loaded
2018-08-02T03:57:30.786Z,1533182250.786 [ComponentRegistry](DEBUG): SyncComponent "DepthRateCalculator" handled in the control thread.
2018-08-02T03:57:30.792Z,1533182250.792 [PitchRateCalculator] Loaded
2018-08-02T03:57:30.793Z,1533182250.793 [ComponentRegistry](DEBUG): SyncComponent "PitchRateCalculator" handled in the control thread.
2018-08-02T03:57:30.809Z,1533182250.809 [SpeedCalculator] Loaded
2018-08-02T03:57:30.809Z,1533182250.809 [ComponentRegistry](DEBUG): SyncComponent "SpeedCalculator" handled in the control thread.
2018-08-02T03:57:30.831Z,1533182250.831 [TempGradientCalculator] Loaded
2018-08-02T03:57:30.831Z,1533182250.831 [ComponentRegistry](DEBUG): SyncComponent "TempGradientCalculator" handled in the control thread.
2018-08-02T03:57:30.846Z,1533182250.846 [VerticalTemperatureHomogeneityIndexCalculator] Loaded
2018-08-02T03:57:30.847Z,1533182250.847 [ComponentRegistry](DEBUG): SyncComponent "VerticalTemperatureHomogeneityIndexCalculator" handled in the control thread.
2018-08-02T03:57:30.852Z,1533182250.852 [YawRateCalculator] Loaded
2018-08-02T03:57:30.853Z,1533182250.853 [ComponentRegistry](DEBUG): SyncComponent "YawRateCalculator" handled in the control thread.
2018-08-02T03:57:30.893Z,1533182250.893 [ElevatorOffsetCalculator] Loaded
2018-08-02T03:57:30.894Z,1533182250.894 [ComponentRegistry](DEBUG): SyncComponent "ElevatorOffsetCalculator" handled in the control thread.
2018-08-02T03:57:30.894Z,1533182250.894 [Module Loader](DEBUG): Loaded Module: Derivation (Contains the base derivation components)
2018-08-02T03:57:30.895Z,1533182250.895 [Module Loader](DEBUG): Loading Module at Modules/Trigger.so
2018-08-02T03:57:30.932Z,1533182250.932 [Module Loader](DEBUG): Loaded Module: Trigger (Contains triggers for use in missions)
2018-08-02T03:57:30.933Z,1533182250.933 [Module Loader](DEBUG): Loading Module at Modules/Sensor.so
2018-08-02T03:57:31.325Z,1533182251.325 [DataOverHttps] Loaded
2018-08-02T03:57:31.325Z,1533182251.325 [ComponentRegistry](DEBUG): SyncComponent "DataOverHttps" handled in the control thread.
2018-08-02T03:57:31.352Z,1533182251.352 [Depth_Keller] Loaded
2018-08-02T03:57:31.353Z,1533182251.353 [ComponentRegistry](DEBUG): SyncComponent "Depth_Keller" handled in the control thread.
2018-08-02T03:57:31.453Z,1533182251.453 [NAL9602] Loaded
2018-08-02T03:57:31.453Z,1533182251.453 [ComponentRegistry](DEBUG): SyncComponent "NAL9602" handled in the control thread.
2018-08-02T03:57:31.469Z,1533182251.469 [Onboard] Loaded
2018-08-02T03:57:31.469Z,1533182251.469 [ComponentRegistry](DEBUG): SyncComponent "Onboard" handled in the control thread.
2018-08-02T03:57:31.480Z,1533182251.480 [Radio_Surface] Loaded
2018-08-02T03:57:31.480Z,1533182251.480 [ComponentRegistry](DEBUG): Component "Radio_Surface" handled in its own thread.
2018-08-02T03:57:31.481Z,1533182251.481 [Radio_Surface ThreadHandler](DEBUG): Created PCaller Thread at 407B84E0
2018-08-02T03:57:31.481Z,1533182251.481 [Radio_Surface ThreadHandler](INFO): Protected caller Thread ID is 2311
2018-08-02T03:57:31.530Z,1533182251.530 [PNI_TCM] Loaded
2018-08-02T03:57:31.530Z,1533182251.530 [ComponentRegistry](DEBUG): SyncComponent "PNI_TCM" handled in the control thread.
2018-08-02T03:57:33.316Z,1533182253.316 [BPC1] Loaded
2018-08-02T03:57:33.316Z,1533182253.316 [ComponentRegistry](DEBUG): SyncComponent "BPC1" handled in the control thread.
2018-08-02T03:57:33.316Z,1533182253.316 [Module Loader](DEBUG): Loaded Module: Sensor (Contains the sensor components)
2018-08-02T03:57:33.317Z,1533182253.317 [Module Loader](DEBUG): Loading Module at Modules/BIT.so
2018-08-02T03:57:34.181Z,1533182254.181 [SBIT](DEBUG): Construct Startup Built In Test.
2018-08-02T03:57:34.204Z,1533182254.204 [SBIT] Loaded
2018-08-02T03:57:34.205Z,1533182254.205 [ComponentRegistry](DEBUG): SyncComponent "SBIT" handled in the control thread.
2018-08-02T03:57:34.205Z,1533182254.205 [IBIT](DEBUG): Construct Initiated Built In Test.
2018-08-02T03:57:34.217Z,1533182254.217 [IBIT] Loaded
2018-08-02T03:57:34.217Z,1533182254.217 [ComponentRegistry](DEBUG): SyncComponent "IBIT" handled in the control thread.
2018-08-02T03:57:34.220Z,1533182254.220 [CBIT](DEBUG): Construct Continuous Built In Test.
2018-08-02T03:57:34.443Z,1533182254.443 [CBIT] Loaded
2018-08-02T03:57:34.444Z,1533182254.444 [ComponentRegistry](DEBUG): SyncComponent "CBIT" handled in the control thread.
2018-08-02T03:57:34.444Z,1533182254.444 [Module Loader](DEBUG): Loaded Module: BIT (Contains the BuiltInTest components, such as C Built In Test)
2018-08-02T03:57:34.445Z,1533182254.445 [Module Loader](DEBUG): Loading Module at Modules/Science.so
2018-08-02T03:57:34.635Z,1533182254.635 [Aanderaa_O2] Loaded
2018-08-02T03:57:34.635Z,1533182254.635 [ComponentRegistry](DEBUG): SyncComponent "Aanderaa_O2" handled in the control thread.
2018-08-02T03:57:34.683Z,1533182254.683 [CTD_Seabird] Loaded
2018-08-02T03:57:34.683Z,1533182254.683 [ComponentRegistry](DEBUG): Component "CTD_Seabird" handled in its own thread.
2018-08-02T03:57:34.684Z,1533182254.684 [CTD_Seabird ThreadHandler](DEBUG): Created PCaller Thread at 4087A4E0
2018-08-02T03:57:34.685Z,1533182254.685 [CTD_Seabird ThreadHandler](INFO): Protected caller Thread ID is 2312
2018-08-02T03:57:34.702Z,1533182254.702 [ESPComponent] Loaded
2018-08-02T03:57:34.703Z,1533182254.703 [ComponentRegistry](DEBUG): SyncComponent "ESPComponent" handled in the control thread.
2018-08-02T03:57:34.717Z,1533182254.717 [PAR_Licor] Loaded
2018-08-02T03:57:34.717Z,1533182254.717 [ComponentRegistry](DEBUG): SyncComponent "PAR_Licor" handled in the control thread.
2018-08-02T03:57:34.767Z,1533182254.767 [WetLabsBB2FL] Loaded
2018-08-02T03:57:34.767Z,1533182254.767 [ComponentRegistry](DEBUG): Component "WetLabsBB2FL" handled in its own thread.
2018-08-02T03:57:34.768Z,1533182254.768 [WetLabsBB2FL ThreadHandler](DEBUG): Created PCaller Thread at 408AA4E0
2018-08-02T03:57:34.769Z,1533182254.769 [WetLabsBB2FL ThreadHandler](INFO): Protected caller Thread ID is 2313
2018-08-02T03:57:34.769Z,1533182254.769 [Module Loader](DEBUG): Loaded Module: Science (Contains the science components)
2018-08-02T03:57:34.770Z,1533182254.770 [Module Loader](DEBUG): Loading Module at Modules/Guidance.so
2018-08-02T03:57:35.054Z,1533182255.054 [Module Loader](DEBUG): Loaded Module: Guidance (Contains behaviors and commands)
2018-08-02T03:57:35.055Z,1533182255.055 [Module Loader](DEBUG): Loading Module at Modules/Control.so
2018-08-02T03:57:35.144Z,1533182255.144 [VerticalControl](DEBUG): Construct VerticalControl.
2018-08-02T03:57:35.240Z,1533182255.240 [VerticalControl] Loaded
2018-08-02T03:57:35.240Z,1533182255.240 [ComponentRegistry](DEBUG): SyncComponent "VerticalControl" handled in the control thread.
2018-08-02T03:57:35.241Z,1533182255.241 [HorizontalControl](DEBUG): Construct HorizontalControl.
2018-08-02T03:57:35.303Z,1533182255.303 [HorizontalControl] Loaded
2018-08-02T03:57:35.303Z,1533182255.303 [ComponentRegistry](DEBUG): SyncComponent "HorizontalControl" handled in the control thread.
2018-08-02T03:57:35.304Z,1533182255.304 [SpeedControl](DEBUG): Construct SpeedControl.
2018-08-02T03:57:35.309Z,1533182255.309 [SpeedControl] Loaded
2018-08-02T03:57:35.310Z,1533182255.310 [ComponentRegistry](DEBUG): SyncComponent "SpeedControl" handled in the control thread.
2018-08-02T03:57:35.310Z,1533182255.310 [LoopControl](DEBUG): Construct LoopControl.
2018-08-02T03:57:35.311Z,1533182255.311 [LoopControl] Loaded
2018-08-02T03:57:35.311Z,1533182255.311 [ComponentRegistry](DEBUG): SyncComponent "LoopControl" handled in the control thread.
2018-08-02T03:57:35.311Z,1533182255.311 [Module Loader](DEBUG): Loaded Module: Control (Contains the Control components, such as Depth, Heading, and Speed Control)
2018-08-02T03:57:35.312Z,1533182255.312 [Module Loader](DEBUG): Loading Module at Modules/Estimation.so
2018-08-02T03:57:35.434Z,1533182255.434 [StratificationFrontDetector](INFO): threshold set to: 0.399988 degC
2018-08-02T03:57:35.434Z,1533182255.434 [StratificationFrontDetector](DEBUG): (re)initializing
2018-08-02T03:57:35.434Z,1533182255.434 [StratificationFrontDetector] Loaded
2018-08-02T03:57:35.434Z,1533182255.434 [ComponentRegistry](DEBUG): SyncComponent "StratificationFrontDetector" handled in the control thread.
2018-08-02T03:57:35.435Z,1533182255.435 [Module Loader](DEBUG): Loaded Module: Estimation (Contains the base estimation components)
2018-08-02T03:57:35.436Z,1533182255.436 [Module Loader](DEBUG): Loading Module at Modules/Servo.so
2018-08-02T03:57:35.555Z,1533182255.555 [BuoyancyServo] Loaded
2018-08-02T03:57:35.556Z,1533182255.556 [ComponentRegistry](DEBUG): SyncComponent "BuoyancyServo" handled in the control thread.
2018-08-02T03:57:35.568Z,1533182255.568 [ElevatorServo] Loaded
2018-08-02T03:57:35.568Z,1533182255.568 [ComponentRegistry](DEBUG): SyncComponent "ElevatorServo" handled in the control thread.
2018-08-02T03:57:35.579Z,1533182255.579 [MassServo] Loaded
2018-08-02T03:57:35.579Z,1533182255.579 [ComponentRegistry](DEBUG): SyncComponent "MassServo" handled in the control thread.
2018-08-02T03:57:35.591Z,1533182255.591 [RudderServo] Loaded
2018-08-02T03:57:35.591Z,1533182255.591 [ComponentRegistry](DEBUG): SyncComponent "RudderServo" handled in the control thread.
2018-08-02T03:57:35.602Z,1533182255.602 [ThrusterServo] Loaded
2018-08-02T03:57:35.602Z,1533182255.602 [ComponentRegistry](DEBUG): SyncComponent "ThrusterServo" handled in the control thread.
2018-08-02T03:57:35.603Z,1533182255.603 [Module Loader](DEBUG): Loaded Module: Servo (This is the module containing motor controllers)
2018-08-02T03:57:35.603Z,1533182255.603 [Module Loader](DEBUG): Loading Module at Modules/Navigation.so
2018-08-02T03:57:35.710Z,1533182255.710 [DeadReckonUsingSpeedCalculator] Loaded
2018-08-02T03:57:35.711Z,1533182255.711 [ComponentRegistry](DEBUG): SyncComponent "DeadReckonUsingSpeedCalculator" handled in the control thread.
2018-08-02T03:57:35.727Z,1533182255.727 [NavChart] Loaded
2018-08-02T03:57:35.728Z,1533182255.728 [ComponentRegistry](DEBUG): SyncComponent "NavChart" handled in the control thread.
2018-08-02T03:57:35.732Z,1533182255.732 [UniversalFixResidualReporter] Loaded
2018-08-02T03:57:35.732Z,1533182255.732 [ComponentRegistry](DEBUG): SyncComponent "UniversalFixResidualReporter" handled in the control thread.
2018-08-02T03:57:35.732Z,1533182255.732 [Module Loader](DEBUG): Loaded Module: Navigation (Contains the base navigation components)
2018-08-02T03:57:35.736Z,1533182255.736 [ComponentRegistry](DEBUG): SyncComponent "MissionManager" handled in the control thread.
2018-08-02T03:57:35.737Z,1533182255.737 [ComponentRegistry](DEBUG): SyncComponent "Reporter" handled in the control thread.
2018-08-02T03:57:35.744Z,1533182255.744 [ComponentRegistry](DEBUG): Component "NavChartDb" handled in its own thread.
2018-08-02T03:57:35.745Z,1533182255.745 [NavChartDb ThreadHandler](DEBUG): Created PCaller Thread at 40A034E0
2018-08-02T03:57:35.746Z,1533182255.746 [NavChartDb ThreadHandler](INFO): Protected caller Thread ID is 2314
2018-08-02T03:57:35.750Z,1533182255.750 [Supervisor](INFO): Main Thread ID is 797
2018-08-02T03:57:35.751Z,1533182255.751 [Supervisor](DEBUG): Running supervisor.
2018-08-02T03:57:35.751Z,1533182255.751 [CommandLine ThreadHandler](INFO): Handler Thread ID is 2315
2018-08-02T03:57:35.754Z,1533182255.754 [controlThread ThreadHandler](INFO): Handler Thread ID is 2316
2018-08-02T03:57:35.754Z,1533182255.754 [controlThread](DEBUG): Initializing ControlThread
2018-08-02T03:57:35.755Z,1533182255.755 [DepthRateCalculator](DEBUG): Initializing DepthRateCalculator.
2018-08-02T03:57:35.755Z,1533182255.755 [PitchRateCalculator](DEBUG): Initializing PitchRateCalculator.
2018-08-02T03:57:35.756Z,1533182255.756 [SpeedCalculator](DEBUG): Initializing SpeedCalculator.
2018-08-02T03:57:35.756Z,1533182255.756 [TempGradientCalculator](DEBUG): Initializing TempGradientCalculator.
2018-08-02T03:57:35.757Z,1533182255.757 [VerticalTemperatureHomogeneityIndexCalculator](DEBUG): (re)initializing
2018-08-02T03:57:35.758Z,1533182255.758 [YawRateCalculator](DEBUG): Initializing YawRateCalculator.
2018-08-02T03:57:35.758Z,1533182255.758 [ElevatorOffsetCalculator](DEBUG): Initializing ElevatorOffsetCalculator.
2018-08-02T03:57:35.762Z,1533182255.762 [SBIT](INFO): Initialize SBIT Component.
2018-08-02T03:57:35.763Z,1533182255.763 [SBIT](IMPORTANT): git: 2018-08-01-5-gcc93819
2018-08-02T03:57:35.763Z,1533182255.763 [SBIT](INFO): git hash: cc93819918adb26e0a54d9000f5d981a6d8162c0
2018-08-02T03:57:35.763Z,1533182255.763 [SBIT](IMPORTANT): Kernel Release: 2.6.27.8
2018-08-02T03:57:35.765Z,1533182255.765 [SBIT](INFO): Kernel Reporting Different Version From Configuration.
Kernel Expected: #639 PREEMPT Wed Mar 12 12:53:33 PDT 2014
Kernel Reported: #2 PREEMPT Thu Jan 11 20:13:48 PST 2018
2018-08-02T03:57:35.766Z,1533182255.766 [SBIT](INFO): Beginning SBIT in 59.000000 seconds.
2018-08-02T03:57:35.766Z,1533182255.766 [IBIT](INFO): Initialize IBIT Component.
2018-08-02T03:57:35.767Z,1533182255.767 [CBIT](DEBUG): Initialize CBIT Component.
2018-08-02T03:57:35.768Z,1533182255.768 [CBIT](INFO): Last reboot was NOT due to watchdog timer.
2018-08-02T03:57:35.769Z,1533182255.769 [logger ThreadHandler](INFO): Handler Thread ID is 2317
2018-08-02T03:57:35.786Z,1533182255.786 [Radio_Surface ThreadHandler](INFO): Handler Thread ID is 2318
2018-08-02T03:57:35.792Z,1533182255.792 [Radio_Surface](INFO): Powering up
2018-08-02T03:57:35.798Z,1533182255.798 [CTD_Seabird ThreadHandler](INFO): Handler Thread ID is 2319
2018-08-02T03:57:35.798Z,1533182255.798 [CTD_Seabird](INFO): Initializing
2018-08-02T03:57:35.799Z,1533182255.799 [CTD_Seabird](INFO): Checking LCM
2018-08-02T03:57:35.808Z,1533182255.808 [CTD_Seabird](INFO): LCM OK
2018-08-02T03:57:35.808Z,1533182255.808 [CTD_Seabird](INFO): Powering up
2018-08-02T03:57:35.814Z,1533182255.814 [WetLabsBB2FL ThreadHandler](INFO): Handler Thread ID is 2320
2018-08-02T03:57:35.815Z,1533182255.815 [WetLabsBB2FL](INFO): Powering down
2018-08-02T03:57:35.842Z,1533182255.842 [NavChartDb ThreadHandler](INFO): Handler Thread ID is 2321
2018-08-02T03:57:35.851Z,1533182255.851 [NavChartDb](INFO): Looking for Electronic Nav Chart file at: Resources/ElectronicNavigationCharts/US1WC07M.000
2018-08-02T03:57:35.851Z,1533182255.851 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US1WC07M.000
2018-08-02T03:57:35.851Z,1533182255.851 [NavChartDb](INFO): Looking for Electronic Nav Chart file at: Resources/ElectronicNavigationCharts/US2WC11M.000
2018-08-02T03:57:35.851Z,1533182255.851 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US2WC11M.000
2018-08-02T03:57:35.852Z,1533182255.852 [NavChartDb](INFO): Looking for Electronic Nav Chart file at: Resources/ElectronicNavigationCharts/US3CA52M.000
2018-08-02T03:57:35.852Z,1533182255.852 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US3CA52M.000
2018-08-02T03:57:35.852Z,1533182255.852 [NavChartDb](INFO): Looking for Electronic Nav Chart file at: Resources/ElectronicNavigationCharts/US4CA60M.000
2018-08-02T03:57:35.852Z,1533182255.852 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US4CA60M.000
2018-08-02T03:57:35.852Z,1533182255.852 [NavChartDb](INFO): Looking for Electronic Nav Chart file at: Resources/ElectronicNavigationCharts/US5CA50M.000
2018-08-02T03:57:35.853Z,1533182255.853 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA50M.000
2018-08-02T03:57:35.853Z,1533182255.853 [NavChartDb](INFO): Looking for Electronic Nav Chart file at: Resources/ElectronicNavigationCharts/US5CA61M.000
2018-08-02T03:57:35.853Z,1533182255.853 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA61M.000
2018-08-02T03:57:35.854Z,1533182255.854 [NavChartDb](INFO): Looking for Electronic Nav Chart file at: Resources/ElectronicNavigationCharts/US5CA62M.000
2018-08-02T03:57:35.854Z,1533182255.854 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA62M.000
2018-08-02T03:57:35.854Z,1533182255.854 [NavChartDb](INFO): Looking for Electronic Nav Chart file at: Resources/ElectronicNavigationCharts/US5CA83M.000
2018-08-02T03:57:35.854Z,1533182255.854 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA83M.000
2018-08-02T03:57:35.878Z,1533182255.878 [VerticalControl](DEBUG): Initialize VerticalControlComponent.
2018-08-02T03:57:35.879Z,1533182255.879 [HorizontalControl](DEBUG): Initialize HorizontalControlComponent.
2018-08-02T03:57:35.880Z,1533182255.880 [SpeedControl](DEBUG): Initialize SpeedControlComponent.
2018-08-02T03:57:35.881Z,1533182255.881 [LoopControl](DEBUG): Initialize LoopControlComponent.
2018-08-02T03:57:35.883Z,1533182255.883 [DeadReckonUsingSpeedCalculator](DEBUG): Initializing DeadReckonUsingSpeedCalculator component.
2018-08-02T03:57:35.883Z,1533182255.883 [DeadReckonUsingSpeedCalculator](INFO): Will consider orientation measurement stale after 120s.
2018-08-02T03:57:35.884Z,1533182255.884 [DeadReckonUsingSpeedCalculator](INFO): Will consider velocity measurement stale after 20s.
2018-08-02T03:57:35.884Z,1533182255.884 [NavChart](DEBUG): Initialize NavChart Navigation.
2018-08-02T03:57:35.885Z,1533182255.885 [UniversalFixResidualReporter](DEBUG): Initializing UniversalFixResidualReporter component.
2018-08-02T03:57:35.886Z,1533182255.886 [MissionManager](INFO): Loading Mission: Missions/Startup.xml
2018-08-02T03:57:35.902Z,1533182255.902 [Startup:A.GoToSurface](DEBUG): Construct GoToSurface.
2018-08-02T03:57:35.938Z,1533182255.938 [MissionManager](DEBUG): 
<?xml version="1.0" encoding="UTF-8"?>
<Mission xmlns="Tethys"
       xmlns:Control="Tethys/Control"
       xmlns:Guidance="Tethys/Guidance" 
       xmlns:Units="Tethys/Units"
       xmlns:Universal="Tethys/Universal"
       xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
       xsi:schemaLocation="Tethys http://okeanids.mbari.org/tethys/Xml/Tethys.xsd
                           Tethys/Control http://okeanids.mbari.org/tethys/Xml/Control.xsd
                           Tethys/Guidance http://okeanids.mbari.org/tethys/Xml/Guidance.xsd
                           Tethys/Units http://okeanids.mbari.org/tethys/Xml/Units.xsd
                           Tethys/Universal http://okeanids.mbari.org/tethys/Xml/Universal.xsd"
       Id="Startup">

    <Guidance:GoToSurface>
        <Progression/>
    </Guidance:GoToSurface>

    <Aggregate Id="StartupSatComms">

        <Sequence/>

        <ReadDatum>
            <Timeout Duration="P1M" />
            <Universal:latitude_fix/>
        </ReadDatum>

        <ReadDatum>
            <Timeout Duration="P1M" />
            <Universal:platform_communications/>
        </ReadDatum>

    </Aggregate>

</Mission>


2018-08-02T03:57:35.939Z,1533182255.939 [MissionManager](INFO): Loading Mission: Missions/Default.xml
2018-08-02T03:57:36.028Z,1533182256.028 [MissionManager](INFO): DefineArg Default.ElapsedSinceDefaultStarted = 0.000000 min
2018-08-02T03:57:36.030Z,1533182256.030 [Default:A.Wait](DEBUG): Construct Wait.
2018-08-02T03:57:36.032Z,1533182256.032 [Default:B.GoToSurface](DEBUG): Construct GoToSurface.
2018-08-02T03:57:36.082Z,1533182256.082 [Default:CheckIn:Read_Iridium:A_Timeout:A.Execute](DEBUG): Construct Execute.
2018-08-02T03:57:36.085Z,1533182256.085 [Default:CheckIn:C.Wait](DEBUG): Construct Wait.
2018-08-02T03:57:36.115Z,1533182256.115 [Default:E.Execute](DEBUG): Construct Execute.
2018-08-02T03:57:36.134Z,1533182256.134 [MissionManager](DEBUG): 
<?xml version="1.0" encoding="UTF-8"?>
<Mission xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
         xmlns="Tethys"
         xmlns:Units="Tethys/Units"
         xmlns:Guidance="Tethys/Guidance"
         xmlns:Universal="Tethys/Universal"
         xsi:schemaLocation="Tethys http://okeanids.mbari.org/tethys/Xml/Tethys.xsd
                             Tethys/Units http://okeanids.mbari.org/tethys/Xml/Units.xsd
                             Tethys/Guidance http://okeanids.mbari.org/tethys/Xml/Guidance.xsd
                             Tethys/Universal http://okeanids.mbari.org/tethys/Xml/Universal.xsd"
         Id="Default">

    <DefineArg Name="ElapsedSinceDefaultStarted"><Units:minute/><Value>0</Value></DefineArg>

    <Guidance:Wait>
        <Description>
            Wait a moment to see if the scheduler starts a new mission before
            starting to actually run Default.
        </Description>
        <Sequence/>
        <Setting><Guidance:Wait.duration/><Units:second/><Value>13</Value></Setting>
    </Guidance:Wait>

    <Guidance:GoToSurface>
        <Progression/>
    </Guidance:GoToSurface>

    <Aggregate Id="CheckIn">

        <Sequence Repeat="288"/>

        <ReadDatum Id="Read_GPS">
            <Timeout Duration="P5M"/>
            <Universal:time_fix/>
        </ReadDatum>

        <ReadDatum Id="Read_Iridium">
            <Timeout Duration="P2H">
                <Guidance:Execute>
                    <Sequence/>
                    <Setting><Guidance:Execute.command/><String>Burn 300</String></Setting>
                </Guidance:Execute>
                <Syslog Severity="Critical">Dropped weight due to communications timeout.</Syslog>
            </Timeout>
            <Universal:platform_communications/>
        </ReadDatum>

        <Guidance:Wait>
            <Sequence/>
            <Setting><Guidance:Wait.duration/><Units:minute/><Value>5</Value></Setting>
        </Guidance:Wait>

        <Assign><Sequence/><Arg Name="ElapsedSinceDefaultStarted"/><Elapsed><Universal:mission_started/></Elapsed></Assign>

        <Syslog Severity="Important">Default mission has been running for <Arg Name="ElapsedSinceDefaultStarted"/><Units:minute/></Syslog>

    </Aggregate>

    <Syslog Severity="Important">Restarting logs and Default mission.</Syslog>

    <Guidance:Execute>
        <Sequence/>
        <Setting><Guidance:Execute.command/><String>restart logs</String></Setting>
    </Guidance:Execute>

</Mission>


2018-08-02T03:57:36.140Z,1533182256.140 [controlThread](DEBUG): Component order: CycleStarter,DataOverHttps,Depth_Keller,NAL9602,Onboard,PNI_TCM,BPC1,Aanderaa_O2,ESPComponent,PAR_Licor,Depth_Keller,PAR_Licor,DepthRateCalculator,PitchRateCalculator,SpeedCalculator,TempGradientCalculator,VerticalTemperatureHomogeneityIndexCalculator,YawRateCalculator,ElevatorOffsetCalculator,StratificationFrontDetector,DeadReckonUsingSpeedCalculator,NavChart,UniversalFixResidualReporter,MissionManager,VerticalControl,HorizontalControl,SpeedControl,LoopControl,BuoyancyServo,ElevatorServo,MassServo,RudderServo,ThrusterServo,SBIT,IBIT,CBIT,Reporter,LogSplitter,
2018-08-02T03:57:36.165Z,1533182256.165 [DataOverHttps](DEBUG): dashIP=134.89.2.23 starts with a digit so assuming it is a numeric IP
2018-08-02T03:57:36.509Z,1533182256.509 [ESPComponent](INFO): powering down ESP
2018-08-02T03:57:37.050Z,1533182257.050 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2018-08-02T03:57:37.166Z,1533182257.166 [BuoyancyServo](DEBUG): Initializing EZServoServo.
2018-08-02T03:57:37.177Z,1533182257.177 [BuoyancyServo](DEBUG): Initializing BuoyancyServo.
2018-08-02T03:57:37.200Z,1533182257.200 [ElevatorServo](DEBUG): Initializing EZServoServo.
2018-08-02T03:57:37.205Z,1533182257.205 [ElevatorServo](DEBUG): Initializing ElevatorServo.
2018-08-02T03:57:37.219Z,1533182257.219 [MassServo](DEBUG): Initializing EZServoServo.
2018-08-02T03:57:37.226Z,1533182257.226 [MassServo](DEBUG): Initializing MassServo.
2018-08-02T03:57:37.239Z,1533182257.239 [RudderServo](DEBUG): Initializing EZServoServo.
2018-08-02T03:57:37.245Z,1533182257.245 [RudderServo](DEBUG): Initializing RudderServo.
2018-08-02T03:57:37.251Z,1533182257.251 [ThrusterServo](DEBUG): Initializing EZServoServo.
2018-08-02T03:57:37.258Z,1533182257.258 [ThrusterServo](DEBUG): Initializing ThrusterServo.
2018-08-02T03:57:37.488Z,1533182257.488 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2018-08-02T03:57:37.788Z,1533182257.788 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2018-08-02T03:57:38.137Z,1533182258.137 [BuoyancyServo](ERROR): Buoyancy initialization uart error serial timeout
2018-08-02T03:57:38.137Z,1533182258.137 [BuoyancyServo](FAULT): Buoyancy failed to initialize
2018-08-02T03:57:38.138Z,1533182258.138 [BuoyancyServo] Communications Fault, FailCount= 1
2018-08-02T03:57:38.138Z,1533182258.138 [BuoyancyServo](ERROR): Communications Fault
2018-08-02T03:57:38.349Z,1533182258.349 [CBIT](ERROR): Communications Fault in component: BuoyancyServo
2018-08-02T03:57:38.527Z,1533182258.527 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2018-08-02T03:57:38.539Z,1533182258.539 [BuoyancyServo](DEBUG): Uninitialize Buoyancy Servo.
2018-08-02T03:57:38.540Z,1533182258.540 [BuoyancyServo](INFO): Powering down
2018-08-02T03:57:38.832Z,1533182258.832 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2018-08-02T03:57:39.193Z,1533182259.193 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2018-08-02T03:57:39.697Z,1533182259.697 [Aanderaa_O2](INFO): Powering down
2018-08-02T03:57:39.866Z,1533182259.866 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2018-08-02T03:57:40.137Z,1533182260.137 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2018-08-02T03:57:40.571Z,1533182260.571 [CBIT](INFO): Clearing failed state for component BuoyancyServo
2018-08-02T03:57:40.571Z,1533182260.571 [BuoyancyServo] No Fault, FailCount= 1
2018-08-02T03:57:40.923Z,1533182260.923 [BuoyancyServo](DEBUG): Initializing EZServoServo.
2018-08-02T03