2018-06-01T01:11:51.575Z,1527815511.575 [Supervisor](DEBUG): Initializing supervisor.
2018-06-01T01:11:51.589Z,1527815511.589 [SyncHandler](DEBUG): Created PCaller Thread at 404514E0
2018-06-01T01:11:51.590Z,1527815511.590 [SyncHandler](INFO): Protected caller Thread ID is 797
2018-06-01T01:11:51.590Z,1527815511.590 [ComponentRegistry](DEBUG): Component "controlThread" handled in its own thread.
2018-06-01T01:11:51.601Z,1527815511.601 [controlThread ThreadHandler](DEBUG): Created PCaller Thread at 404814E0
2018-06-01T01:11:51.601Z,1527815511.601 [controlThread ThreadHandler](INFO): Protected caller Thread ID is 798
2018-06-01T01:11:51.604Z,1527815511.604 [ComponentRegistry](DEBUG): SyncComponent "CycleStarter" handled in the control thread.
2018-06-01T01:11:51.626Z,1527815511.626 [ComponentRegistry](DEBUG): Component "CommandLine" handled in its own thread.
2018-06-01T01:11:51.637Z,1527815511.637 [CommandLine ThreadHandler](DEBUG): Created PCaller Thread at 404B14E0
2018-06-01T01:11:51.637Z,1527815511.637 [CommandLine ThreadHandler](INFO): Protected caller Thread ID is 799
2018-06-01T01:11:51.638Z,1527815511.638 [ComponentRegistry](DEBUG): Component "logger" handled in its own thread.
2018-06-01T01:11:51.649Z,1527815511.649 [logger ThreadHandler](DEBUG): Created PCaller Thread at 404E14E0
2018-06-01T01:11:51.649Z,1527815511.649 [logger ThreadHandler](INFO): Protected caller Thread ID is 800
2018-06-01T01:11:51.651Z,1527815511.651 [ComponentRegistry](DEBUG): SyncComponent "LogSplitter" handled in the control thread.
2018-06-01T01:11:51.652Z,1527815511.652 [Supervisor](INFO): Looking for Config files in directory: Config/
2018-06-01T01:11:51.656Z,1527815511.656 [Supervisor](INFO): Opening Config file at: Config/Sample.cfg
2018-06-01T01:11:51.847Z,1527815511.847 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Sample
2018-06-01T01:11:51.849Z,1527815511.849 [Supervisor](INFO): Opening Config file at: Config/workSite.cfg
2018-06-01T01:11:52.037Z,1527815512.037 [ComponentRegistry](DEBUG): Loaded Config Component "Config/workSite
2018-06-01T01:11:52.038Z,1527815512.038 [Supervisor](INFO): Opening Config file at: Config/logger.cfg
2018-06-01T01:11:52.440Z,1527815512.440 [ComponentRegistry](DEBUG): Loaded Config Component "Config/logger
2018-06-01T01:11:52.441Z,1527815512.441 [Supervisor](INFO): Opening Config file at: Config/Science.cfg
2018-06-01T01:11:53.091Z,1527815513.091 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Science
2018-06-01T01:11:53.093Z,1527815513.093 [Supervisor](INFO): Opening Config file at: Config/Control.cfg
2018-06-01T01:11:53.787Z,1527815513.787 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Control
2018-06-01T01:11:53.790Z,1527815513.790 [Supervisor](INFO): Opening Config file at: Config/Simulator.cfg
2018-06-01T01:11:54.749Z,1527815514.749 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Simulator
2018-06-01T01:11:54.947Z,1527815514.947 [Supervisor](INFO): Opening Config file at: Config/Sensor.cfg
2018-06-01T01:11:55.875Z,1527815515.875 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Sensor
2018-06-01T01:11:55.876Z,1527815515.876 [Supervisor](INFO): Opening Config file at: Config/vehicle.cfg
2018-06-01T01:11:56.827Z,1527815516.827 [ComponentRegistry](DEBUG): Loaded Config Component "Config/vehicle
2018-06-01T01:11:56.829Z,1527815516.829 [Supervisor](INFO): Opening Config file at: Config/Guidance.cfg
2018-06-01T01:11:56.960Z,1527815516.960 [Supervisor](INFO): Opening Config file at: Config/Servo.cfg
2018-06-01T01:11:57.585Z,1527815517.585 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Servo
2018-06-01T01:11:57.587Z,1527815517.587 [Supervisor](INFO): Opening Config file at: Config/Derivation.cfg
2018-06-01T01:11:57.855Z,1527815517.855 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Derivation
2018-06-01T01:11:57.856Z,1527815517.856 [Supervisor](INFO): Opening Config file at: Config/Navigation.cfg
2018-06-01T01:11:58.285Z,1527815518.285 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Navigation
2018-06-01T01:11:58.285Z,1527815518.285 [Supervisor](INFO): Opening Config file at: Config/BIT.cfg
2018-06-01T01:11:58.707Z,1527815518.707 [ComponentRegistry](DEBUG): Loaded Config Component "Config/BIT
2018-06-01T01:11:58.708Z,1527815518.708 [Supervisor](INFO): Opening Config file at: Config/secure.cfg
2018-06-01T01:11:58.891Z,1527815518.891 [ComponentRegistry](DEBUG): Loaded Config Component "Config/secure
2018-06-01T01:11:58.893Z,1527815518.893 [Supervisor](INFO): Opening Config file at: Config/Estimation.cfg
2018-06-01T01:11:59.159Z,1527815519.159 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Estimation
2018-06-01T01:11:59.161Z,1527815519.161 [Supervisor](INFO): Looking for Config files in directory: Config/lrauv-makai/
2018-06-01T01:11:59.167Z,1527815519.167 [Supervisor](INFO): Opening Config file at: Config/lrauv-makai/Battery.cfg
2018-06-01T01:11:59.492Z,1527815519.492 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Battery
2018-06-01T01:11:59.494Z,1527815519.494 [Supervisor](INFO): Opening Config file at: Config/lrauv-makai/logger.cfg
2018-06-01T01:11:59.602Z,1527815519.602 [Supervisor](INFO): Opening Config file at: Config/lrauv-makai/Science.cfg
2018-06-01T01:11:59.750Z,1527815519.750 [Supervisor](INFO): Opening Config file at: Config/lrauv-makai/Control.cfg
2018-06-01T01:11:59.845Z,1527815519.845 [Supervisor](INFO): Opening Config file at: Config/lrauv-makai/Simulator.cfg
2018-06-01T01:11:59.933Z,1527815519.933 [Supervisor](INFO): Opening Config file at: Config/lrauv-makai/Sensor.cfg
2018-06-01T01:12:00.196Z,1527815520.196 [Supervisor](INFO): Opening Config file at: Config/lrauv-makai/vehicle.cfg
2018-06-01T01:12:00.827Z,1527815520.827 [Supervisor](INFO): Opening Config file at: Config/lrauv-makai/Servo.cfg
2018-06-01T01:12:00.927Z,1527815520.927 [Supervisor](INFO): Opening Config file at: Config/lrauv-makai/Navigation.cfg
2018-06-01T01:12:01.022Z,1527815521.022 [Supervisor](INFO): Opening Config file at: Config/lrauv-makai/BIT.cfg
2018-06-01T01:12:01.121Z,1527815521.121 [Supervisor](INFO): Opening Config file at: Config/lrauv-makai/secure.cfg
2018-06-01T01:12:01.205Z,1527815521.205 [Supervisor](FAULT): Ignoring configuration overrides from Data/persisted.cfg
2018-06-01T01:12:01.209Z,1527815521.209 [Module Loader](DEBUG): Loading Module at Modules/Simulator.so
2018-06-01T01:12:01.350Z,1527815521.350 [Module Loader](DEBUG): Loaded Module: Simulator (This is the module containing the Simulator)
2018-06-01T01:12:01.351Z,1527815521.351 [Module Loader](DEBUG): Loading Module at Modules/Sample.so
2018-06-01T01:12:01.375Z,1527815521.375 [Module Loader](DEBUG): Loaded Module: Sample (This is a Sample Module of Sample Components)
2018-06-01T01:12:01.376Z,1527815521.376 [Module Loader](DEBUG): Loading Module at Modules/Derivation.so
2018-06-01T01:12:01.436Z,1527815521.436 [DepthRateCalculator] Loaded
2018-06-01T01:12:01.437Z,1527815521.437 [ComponentRegistry](DEBUG): SyncComponent "DepthRateCalculator" handled in the control thread.
2018-06-01T01:12:01.443Z,1527815521.443 [PitchRateCalculator] Loaded
2018-06-01T01:12:01.443Z,1527815521.443 [ComponentRegistry](DEBUG): SyncComponent "PitchRateCalculator" handled in the control thread.
2018-06-01T01:12:01.460Z,1527815521.460 [SpeedCalculator] Loaded
2018-06-01T01:12:01.460Z,1527815521.460 [ComponentRegistry](DEBUG): SyncComponent "SpeedCalculator" handled in the control thread.
2018-06-01T01:12:01.483Z,1527815521.483 [TempGradientCalculator] Loaded
2018-06-01T01:12:01.483Z,1527815521.483 [ComponentRegistry](DEBUG): SyncComponent "TempGradientCalculator" handled in the control thread.
2018-06-01T01:12:01.500Z,1527815521.500 [VerticalTemperatureHomogeneityIndexCalculator] Loaded
2018-06-01T01:12:01.500Z,1527815521.500 [ComponentRegistry](DEBUG): SyncComponent "VerticalTemperatureHomogeneityIndexCalculator" handled in the control thread.
2018-06-01T01:12:01.506Z,1527815521.506 [YawRateCalculator] Loaded
2018-06-01T01:12:01.506Z,1527815521.506 [ComponentRegistry](DEBUG): SyncComponent "YawRateCalculator" handled in the control thread.
2018-06-01T01:12:01.549Z,1527815521.549 [ElevatorOffsetCalculator] Loaded
2018-06-01T01:12:01.549Z,1527815521.549 [ComponentRegistry](DEBUG): SyncComponent "ElevatorOffsetCalculator" handled in the control thread.
2018-06-01T01:12:01.550Z,1527815521.550 [Module Loader](DEBUG): Loaded Module: Derivation (Contains the base derivation components)
2018-06-01T01:12:01.550Z,1527815521.550 [Module Loader](DEBUG): Loading Module at Modules/Trigger.so
2018-06-01T01:12:01.589Z,1527815521.589 [Module Loader](DEBUG): Loaded Module: Trigger (Contains triggers for use in missions)
2018-06-01T01:12:01.590Z,1527815521.590 [Module Loader](DEBUG): Loading Module at Modules/Sensor.so
2018-06-01T01:12:02.098Z,1527815522.098 [AcousticModem_Benthos_ATM900] Loaded
2018-06-01T01:12:02.099Z,1527815522.099 [ComponentRegistry](DEBUG): SyncComponent "AcousticModem_Benthos_ATM900" handled in the control thread.
2018-06-01T01:12:02.240Z,1527815522.240 [DataOverHttps] Loaded
2018-06-01T01:12:02.241Z,1527815522.241 [ComponentRegistry](DEBUG): SyncComponent "DataOverHttps" handled in the control thread.
2018-06-01T01:12:02.255Z,1527815522.255 [Depth_Keller] Loaded
2018-06-01T01:12:02.255Z,1527815522.255 [ComponentRegistry](DEBUG): SyncComponent "Depth_Keller" handled in the control thread.
2018-06-01T01:12:02.260Z,1527815522.260 [DropWeight] Loaded
2018-06-01T01:12:02.261Z,1527815522.261 [ComponentRegistry](DEBUG): SyncComponent "DropWeight" handled in the control thread.
2018-06-01T01:12:02.366Z,1527815522.366 [NAL9602] Loaded
2018-06-01T01:12:02.366Z,1527815522.366 [ComponentRegistry](DEBUG): SyncComponent "NAL9602" handled in the control thread.
2018-06-01T01:12:02.383Z,1527815522.383 [Onboard] Loaded
2018-06-01T01:12:02.383Z,1527815522.383 [ComponentRegistry](DEBUG): SyncComponent "Onboard" handled in the control thread.
2018-06-01T01:12:02.394Z,1527815522.394 [Radio_Surface] Loaded
2018-06-01T01:12:02.395Z,1527815522.395 [ComponentRegistry](DEBUG): Component "Radio_Surface" handled in its own thread.
2018-06-01T01:12:02.396Z,1527815522.396 [Radio_Surface ThreadHandler](DEBUG): Created PCaller Thread at 407B74E0
2018-06-01T01:12:02.396Z,1527815522.396 [Radio_Surface ThreadHandler](INFO): Protected caller Thread ID is 879
2018-06-01T01:12:02.553Z,1527815522.553 [PNI_TCM] Loaded
2018-06-01T01:12:02.553Z,1527815522.553 [ComponentRegistry](DEBUG): SyncComponent "PNI_TCM" handled in the control thread.
2018-06-01T01:12:02.619Z,1527815522.619 [Rowe_600LCM] Loaded
2018-06-01T01:12:02.619Z,1527815522.619 [ComponentRegistry](DEBUG): Component "Rowe_600LCM" handled in its own thread.
2018-06-01T01:12:02.620Z,1527815522.620 [Rowe_600LCM ThreadHandler](DEBUG): Created PCaller Thread at 407E74E0
2018-06-01T01:12:02.620Z,1527815522.620 [Rowe_600LCM ThreadHandler](INFO): Protected caller Thread ID is 880
2018-06-01T01:12:04.522Z,1527815524.522 [BPC1] Loaded
2018-06-01T01:12:04.522Z,1527815524.522 [ComponentRegistry](DEBUG): SyncComponent "BPC1" handled in the control thread.
2018-06-01T01:12:04.523Z,1527815524.523 [Module Loader](DEBUG): Loaded Module: Sensor (Contains the sensor components)
2018-06-01T01:12:04.523Z,1527815524.523 [Module Loader](DEBUG): Loading Module at Modules/BIT.so
2018-06-01T01:12:04.692Z,1527815524.692 [SBIT](DEBUG): Construct Startup Built In Test.
2018-06-01T01:12:04.717Z,1527815524.717 [SBIT] Loaded
2018-06-01T01:12:04.717Z,1527815524.717 [ComponentRegistry](DEBUG): SyncComponent "SBIT" handled in the control thread.
2018-06-01T01:12:04.718Z,1527815524.718 [IBIT](DEBUG): Construct Initiated Built In Test.
2018-06-01T01:12:04.730Z,1527815524.730 [IBIT] Loaded
2018-06-01T01:12:04.730Z,1527815524.730 [ComponentRegistry](DEBUG): SyncComponent "IBIT" handled in the control thread.
2018-06-01T01:12:04.733Z,1527815524.733 [CBIT](DEBUG): Construct Continuous Built In Test.
2018-06-01T01:12:04.893Z,1527815524.893 [CBIT] Loaded
2018-06-01T01:12:04.893Z,1527815524.893 [ComponentRegistry](DEBUG): SyncComponent "CBIT" handled in the control thread.
2018-06-01T01:12:04.894Z,1527815524.894 [Module Loader](DEBUG): Loaded Module: BIT (Contains the BuiltInTest components, such as C Built In Test)
2018-06-01T01:12:04.894Z,1527815524.894 [Module Loader](DEBUG): Loading Module at Modules/Science.so
2018-06-01T01:12:05.091Z,1527815525.091 [Aanderaa_O2] Loaded
2018-06-01T01:12:05.091Z,1527815525.091 [ComponentRegistry](DEBUG): SyncComponent "Aanderaa_O2" handled in the control thread.
2018-06-01T01:12:05.143Z,1527815525.143 [CTD_Seabird] Loaded
2018-06-01T01:12:05.143Z,1527815525.143 [ComponentRegistry](DEBUG): Component "CTD_Seabird" handled in its own thread.
2018-06-01T01:12:05.144Z,1527815525.144 [CTD_Seabird ThreadHandler](DEBUG): Created PCaller Thread at 408A84E0
2018-06-01T01:12:05.144Z,1527815525.144 [CTD_Seabird ThreadHandler](INFO): Protected caller Thread ID is 881
2018-06-01T01:12:05.162Z,1527815525.162 [ESPComponent] Loaded
2018-06-01T01:12:05.162Z,1527815525.162 [ComponentRegistry](DEBUG): SyncComponent "ESPComponent" handled in the control thread.
2018-06-01T01:12:05.177Z,1527815525.177 [PAR_Licor] Loaded
2018-06-01T01:12:05.178Z,1527815525.178 [ComponentRegistry](DEBUG): SyncComponent "PAR_Licor" handled in the control thread.
2018-06-01T01:12:05.230Z,1527815525.230 [WetLabsBB2FL] Loaded
2018-06-01T01:12:05.231Z,1527815525.231 [ComponentRegistry](DEBUG): Component "WetLabsBB2FL" handled in its own thread.
2018-06-01T01:12:05.232Z,1527815525.232 [WetLabsBB2FL ThreadHandler](DEBUG): Created PCaller Thread at 408D84E0
2018-06-01T01:12:05.232Z,1527815525.232 [WetLabsBB2FL ThreadHandler](INFO): Protected caller Thread ID is 882
2018-06-01T01:12:05.233Z,1527815525.233 [Module Loader](DEBUG): Loaded Module: Science (Contains the science components)
2018-06-01T01:12:05.233Z,1527815525.233 [Module Loader](DEBUG): Loading Module at Modules/Guidance.so
2018-06-01T01:12:05.714Z,1527815525.714 [Module Loader](DEBUG): Loaded Module: Guidance (Contains behaviors and commands)
2018-06-01T01:12:05.714Z,1527815525.714 [Module Loader](DEBUG): Loading Module at Modules/Control.so
2018-06-01T01:12:05.808Z,1527815525.808 [VerticalControl](DEBUG): Construct VerticalControl.
2018-06-01T01:12:05.910Z,1527815525.910 [VerticalControl] Loaded
2018-06-01T01:12:05.910Z,1527815525.910 [ComponentRegistry](DEBUG): SyncComponent "VerticalControl" handled in the control thread.
2018-06-01T01:12:05.911Z,1527815525.911 [HorizontalControl](DEBUG): Construct HorizontalControl.
2018-06-01T01:12:05.977Z,1527815525.977 [HorizontalControl] Loaded
2018-06-01T01:12:05.977Z,1527815525.977 [ComponentRegistry](DEBUG): SyncComponent "HorizontalControl" handled in the control thread.
2018-06-01T01:12:05.978Z,1527815525.978 [SpeedControl](DEBUG): Construct SpeedControl.
2018-06-01T01:12:05.984Z,1527815525.984 [SpeedControl] Loaded
2018-06-01T01:12:05.984Z,1527815525.984 [ComponentRegistry](DEBUG): SyncComponent "SpeedControl" handled in the control thread.
2018-06-01T01:12:05.985Z,1527815525.985 [LoopControl](DEBUG): Construct LoopControl.
2018-06-01T01:12:05.985Z,1527815525.985 [LoopControl] Loaded
2018-06-01T01:12:05.985Z,1527815525.985 [ComponentRegistry](DEBUG): SyncComponent "LoopControl" handled in the control thread.
2018-06-01T01:12:05.986Z,1527815525.986 [Module Loader](DEBUG): Loaded Module: Control (Contains the Control components, such as Depth, Heading, and Speed Control)
2018-06-01T01:12:05.986Z,1527815525.986 [Module Loader](DEBUG): Loading Module at Modules/Estimation.so
2018-06-01T01:12:06.113Z,1527815526.113 [StratificationFrontDetector](INFO): threshold set to: 0.399988 degC
2018-06-01T01:12:06.113Z,1527815526.113 [StratificationFrontDetector](DEBUG): (re)initializing
2018-06-01T01:12:06.113Z,1527815526.113 [StratificationFrontDetector] Loaded
2018-06-01T01:12:06.114Z,1527815526.114 [ComponentRegistry](DEBUG): SyncComponent "StratificationFrontDetector" handled in the control thread.
2018-06-01T01:12:06.114Z,1527815526.114 [Module Loader](DEBUG): Loaded Module: Estimation (Contains the base estimation components)
2018-06-01T01:12:06.115Z,1527815526.115 [Module Loader](DEBUG): Loading Module at Modules/Servo.so
2018-06-01T01:12:06.242Z,1527815526.242 [BuoyancyServo] Loaded
2018-06-01T01:12:06.243Z,1527815526.243 [ComponentRegistry](DEBUG): SyncComponent "BuoyancyServo" handled in the control thread.
2018-06-01T01:12:06.255Z,1527815526.255 [ElevatorServo] Loaded
2018-06-01T01:12:06.255Z,1527815526.255 [ComponentRegistry](DEBUG): SyncComponent "ElevatorServo" handled in the control thread.
2018-06-01T01:12:06.267Z,1527815526.267 [MassServo] Loaded
2018-06-01T01:12:06.267Z,1527815526.267 [ComponentRegistry](DEBUG): SyncComponent "MassServo" handled in the control thread.
2018-06-01T01:12:06.279Z,1527815526.279 [RudderServo] Loaded
2018-06-01T01:12:06.279Z,1527815526.279 [ComponentRegistry](DEBUG): SyncComponent "RudderServo" handled in the control thread.
2018-06-01T01:12:06.290Z,1527815526.290 [ThrusterServo] Loaded
2018-06-01T01:12:06.291Z,1527815526.291 [ComponentRegistry](DEBUG): SyncComponent "ThrusterServo" handled in the control thread.
2018-06-01T01:12:06.291Z,1527815526.291 [Module Loader](DEBUG): Loaded Module: Servo (This is the module containing motor controllers)
2018-06-01T01:12:06.292Z,1527815526.292 [Module Loader](DEBUG): Loading Module at Modules/Navigation.so
2018-06-01T01:12:06.407Z,1527815526.407 [DeadReckonUsingSpeedCalculator] Loaded
2018-06-01T01:12:06.407Z,1527815526.407 [ComponentRegistry](DEBUG): SyncComponent "DeadReckonUsingSpeedCalculator" handled in the control thread.
2018-06-01T01:12:06.424Z,1527815526.424 [NavChart] Loaded
2018-06-01T01:12:06.425Z,1527815526.425 [ComponentRegistry](DEBUG): SyncComponent "NavChart" handled in the control thread.
2018-06-01T01:12:06.429Z,1527815526.429 [UniversalFixResidualReporter] Loaded
2018-06-01T01:12:06.429Z,1527815526.429 [ComponentRegistry](DEBUG): SyncComponent "UniversalFixResidualReporter" handled in the control thread.
2018-06-01T01:12:06.430Z,1527815526.430 [Module Loader](DEBUG): Loaded Module: Navigation (Contains the base navigation components)
2018-06-01T01:12:06.433Z,1527815526.433 [ComponentRegistry](DEBUG): SyncComponent "MissionManager" handled in the control thread.
2018-06-01T01:12:06.434Z,1527815526.434 [ComponentRegistry](DEBUG): SyncComponent "Reporter" handled in the control thread.
2018-06-01T01:12:06.441Z,1527815526.441 [ComponentRegistry](DEBUG): Component "NavChartDb" handled in its own thread.
2018-06-01T01:12:06.442Z,1527815526.442 [NavChartDb ThreadHandler](DEBUG): Created PCaller Thread at 40A314E0
2018-06-01T01:12:06.442Z,1527815526.442 [NavChartDb ThreadHandler](INFO): Protected caller Thread ID is 883
2018-06-01T01:12:06.447Z,1527815526.447 [Supervisor](INFO): Main Thread ID is 796
2018-06-01T01:12:06.447Z,1527815526.447 [Supervisor](DEBUG): Running supervisor.
2018-06-01T01:12:06.448Z,1527815526.448 [CommandLine ThreadHandler](INFO): Handler Thread ID is 884
2018-06-01T01:12:06.450Z,1527815526.450 [controlThread ThreadHandler](INFO): Handler Thread ID is 885
2018-06-01T01:12:06.451Z,1527815526.451 [controlThread](DEBUG): Initializing ControlThread
2018-06-01T01:12:06.451Z,1527815526.451 [DepthRateCalculator](DEBUG): Initializing DepthRateCalculator.
2018-06-01T01:12:06.452Z,1527815526.452 [PitchRateCalculator](DEBUG): Initializing PitchRateCalculator.
2018-06-01T01:12:06.452Z,1527815526.452 [SpeedCalculator](DEBUG): Initializing SpeedCalculator.
2018-06-01T01:12:06.453Z,1527815526.453 [TempGradientCalculator](DEBUG): Initializing TempGradientCalculator.
2018-06-01T01:12:06.453Z,1527815526.453 [VerticalTemperatureHomogeneityIndexCalculator](DEBUG): (re)initializing
2018-06-01T01:12:06.454Z,1527815526.454 [YawRateCalculator](DEBUG): Initializing YawRateCalculator.
2018-06-01T01:12:06.454Z,1527815526.454 [ElevatorOffsetCalculator](DEBUG): Initializing ElevatorOffsetCalculator.
2018-06-01T01:12:06.459Z,1527815526.459 [SBIT](INFO): Initialize SBIT Component.
2018-06-01T01:12:06.460Z,1527815526.460 [SBIT](IMPORTANT): git: 2018-05-22-9-g50bf88e
2018-06-01T01:12:06.460Z,1527815526.460 [SBIT](INFO): git hash: 50bf88ee6b55173a110d9cc66fa000c4cffea622
2018-06-01T01:12:06.460Z,1527815526.460 [SBIT](IMPORTANT): Kernel Release: 2.6.27.8
2018-06-01T01:12:06.462Z,1527815526.462 [SBIT](INFO): Kernel Reporting Different Version From Configuration.
Kernel Expected: #639 PREEMPT Wed Mar 12 12:53:33 PDT 2014
Kernel Reported: #2 PREEMPT Thu Jan 11 20:13:48 PST 2018
2018-06-01T01:12:06.463Z,1527815526.463 [SBIT](INFO): Beginning SBIT in 63.000000 seconds.
2018-06-01T01:12:06.463Z,1527815526.463 [IBIT](INFO): Initialize IBIT Component.
2018-06-01T01:12:06.464Z,1527815526.464 [CBIT](DEBUG): Initialize CBIT Component.
2018-06-01T01:12:06.464Z,1527815526.464 [CBIT](FAULT): LAST RESTART WAS UNINTENTIONAL.
2018-06-01T01:12:06.465Z,1527815526.465 [CBIT](CRITICAL): LAST REBOOT DUE TO WATCHDOG TIMER RESET.
2018-06-01T01:12:06.466Z,1527815526.466 [logger ThreadHandler](INFO): Handler Thread ID is 886
2018-06-01T01:12:06.485Z,1527815526.485 [Radio_Surface ThreadHandler](INFO): Handler Thread ID is 887
2018-06-01T01:12:06.491Z,1527815526.491 [Radio_Surface](INFO): Powering up
2018-06-01T01:12:06.497Z,1527815526.497 [Rowe_600LCM ThreadHandler](INFO): Handler Thread ID is 888
2018-06-01T01:12:06.498Z,1527815526.498 [Rowe_600LCM](INFO): Initializing
2018-06-01T01:12:06.498Z,1527815526.498 [Rowe_600LCM](INFO): Checking LCM
2018-06-01T01:12:06.577Z,1527815526.577 [VerticalControl](DEBUG): Initialize VerticalControlComponent.
2018-06-01T01:12:06.584Z,1527815526.584 [HorizontalControl](DEBUG): Initialize HorizontalControlComponent.
2018-06-01T01:12:06.587Z,1527815526.587 [SpeedControl](DEBUG): Initialize SpeedControlComponent.
2018-06-01T01:12:06.590Z,1527815526.590 [LoopControl](DEBUG): Initialize LoopControlComponent.
2018-06-01T01:12:06.602Z,1527815526.602 [DeadReckonUsingSpeedCalculator](DEBUG): Initializing DeadReckonUsingSpeedCalculator component.
2018-06-01T01:12:06.603Z,1527815526.603 [DeadReckonUsingSpeedCalculator](INFO): Will consider orientation measurement stale after 120s.
2018-06-01T01:12:06.603Z,1527815526.603 [DeadReckonUsingSpeedCalculator](INFO): Will consider velocity measurement stale after 20s.
2018-06-01T01:12:06.604Z,1527815526.604 [NavChart](DEBUG): Initialize NavChart Navigation.
2018-06-01T01:12:06.604Z,1527815526.604 [UniversalFixResidualReporter](DEBUG): Initializing UniversalFixResidualReporter component.
2018-06-01T01:12:06.606Z,1527815526.606 [MissionManager](INFO): Loading Mission: Missions/Startup.xml
2018-06-01T01:12:06.628Z,1527815526.628 [CTD_Seabird ThreadHandler](INFO): Handler Thread ID is 889
2018-06-01T01:12:06.628Z,1527815526.628 [CTD_Seabird](INFO): Initializing
2018-06-01T01:12:06.629Z,1527815526.629 [CTD_Seabird](INFO): Checking LCM
2018-06-01T01:12:06.711Z,1527815526.711 [WetLabsBB2FL ThreadHandler](INFO): Handler Thread ID is 890
2018-06-01T01:12:06.714Z,1527815526.714 [WetLabsBB2FL](INFO): Powering down
2018-06-01T01:12:06.745Z,1527815526.745 [NavChartDb ThreadHandler](INFO): Handler Thread ID is 891
2018-06-01T01:12:06.753Z,1527815526.753 [NavChartDb](INFO): Looking for Electronic Nav Chart file at: Resources/ElectronicNavigationCharts/US1WC07M.000
2018-06-01T01:12:06.753Z,1527815526.753 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US1WC07M.000
2018-06-01T01:12:06.753Z,1527815526.753 [NavChartDb](INFO): Looking for Electronic Nav Chart file at: Resources/ElectronicNavigationCharts/US2WC11M.000
2018-06-01T01:12:06.753Z,1527815526.753 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US2WC11M.000
2018-06-01T01:12:06.754Z,1527815526.754 [NavChartDb](INFO): Looking for Electronic Nav Chart file at: Resources/ElectronicNavigationCharts/US3CA52M.000
2018-06-01T01:12:06.754Z,1527815526.754 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US3CA52M.000
2018-06-01T01:12:06.754Z,1527815526.754 [NavChartDb](INFO): Looking for Electronic Nav Chart file at: Resources/ElectronicNavigationCharts/US4CA60M.000
2018-06-01T01:12:06.754Z,1527815526.754 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US4CA60M.000
2018-06-01T01:12:06.755Z,1527815526.755 [NavChartDb](INFO): Looking for Electronic Nav Chart file at: Resources/ElectronicNavigationCharts/US5CA50M.000
2018-06-01T01:12:06.755Z,1527815526.755 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA50M.000
2018-06-01T01:12:06.755Z,1527815526.755 [NavChartDb](INFO): Looking for Electronic Nav Chart file at: Resources/ElectronicNavigationCharts/US5CA61M.000
2018-06-01T01:12:06.755Z,1527815526.755 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA61M.000
2018-06-01T01:12:06.755Z,1527815526.755 [NavChartDb](INFO): Looking for Electronic Nav Chart file at: Resources/ElectronicNavigationCharts/US5CA62M.000
2018-06-01T01:12:06.756Z,1527815526.756 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA62M.000
2018-06-01T01:12:06.756Z,1527815526.756 [NavChartDb](INFO): Looking for Electronic Nav Chart file at: Resources/ElectronicNavigationCharts/US5CA83M.000
2018-06-01T01:12:06.756Z,1527815526.756 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA83M.000
2018-06-01T01:12:06.766Z,1527815526.766 [Startup:A.GoToSurface](DEBUG): Construct GoToSurface.
2018-06-01T01:12:06.845Z,1527815526.845 [MissionManager](DEBUG): 
<?xml version="1.0" encoding="UTF-8"?>
<Mission xmlns="Tethys"
       xmlns:Control="Tethys/Control"
       xmlns:Guidance="Tethys/Guidance" 
       xmlns:Units="Tethys/Units"
       xmlns:Universal="Tethys/Universal"
       xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
       xsi:schemaLocation="Tethys http://okeanids.mbari.org/tethys/Xml/Tethys.xsd
                           Tethys/Control http://okeanids.mbari.org/tethys/Xml/Control.xsd
                           Tethys/Guidance http://okeanids.mbari.org/tethys/Xml/Guidance.xsd
                           Tethys/Units http://okeanids.mbari.org/tethys/Xml/Units.xsd
                           Tethys/Universal http://okeanids.mbari.org/tethys/Xml/Universal.xsd"
       Id="Startup">

    <Guidance:GoToSurface>
        <Progression/>
    </Guidance:GoToSurface>

    <Aggregate Id="StartupSatComms">

        <Sequence/>

        <ReadDatum>
            <Timeout Duration="P1M" />
            <Universal:latitude_fix/>
        </ReadDatum>

        <ReadDatum>
            <Timeout Duration="P1M" />
            <Universal:platform_communications/>
        </ReadDatum>

    </Aggregate>

</Mission>


2018-06-01T01:12:06.846Z,1527815526.846 [MissionManager](INFO): Loading Mission: Missions/Default.xml
2018-06-01T01:12:06.900Z,1527815526.900 [CTD_Seabird](INFO): LCM OK
2018-06-01T01:12:06.900Z,1527815526.900 [CTD_Seabird](INFO): Powering up
2018-06-01T01:12:06.909Z,1527815526.909 [Rowe_600LCM](INFO): LCM OK
2018-06-01T01:12:06.909Z,1527815526.909 [Rowe_600LCM](INFO): Powering up
2018-06-01T01:12:06.997Z,1527815526.997 [MissionManager](INFO): DefineArg Default.ElapsedSinceDefaultStarted = 0.000000 min
2018-06-01T01:12:06.999Z,1527815526.999 [Default:A.Wait](DEBUG): Construct Wait.
2018-06-01T01:12:07.000Z,1527815527.000 [Default:B.GoToSurface](DEBUG): Construct GoToSurface.
2018-06-01T01:12:07.043Z,1527815527.043 [Default:CheckIn:Read_Iridium:A_Timeout:A.Execute](DEBUG): Construct Execute.
2018-06-01T01:12:07.046Z,1527815527.046 [Default:CheckIn:C.Wait](DEBUG): Construct Wait.
2018-06-01T01:12:07.072Z,1527815527.072 [Default:E.Execute](DEBUG): Construct Execute.
2018-06-01T01:12:07.076Z,1527815527.076 [MissionManager](DEBUG): 
<?xml version="1.0" encoding="UTF-8"?>
<Mission xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
         xmlns="Tethys"
         xmlns:Units="Tethys/Units"
         xmlns:Guidance="Tethys/Guidance"
         xmlns:Universal="Tethys/Universal"
         xsi:schemaLocation="Tethys http://okeanids.mbari.org/tethys/Xml/Tethys.xsd
                             Tethys/Units http://okeanids.mbari.org/tethys/Xml/Units.xsd
                             Tethys/Guidance http://okeanids.mbari.org/tethys/Xml/Guidance.xsd
                             Tethys/Universal http://okeanids.mbari.org/tethys/Xml/Universal.xsd"
         Id="Default">

    <DefineArg Name="ElapsedSinceDefaultStarted"><Units:minute/><Value>0</Value></DefineArg>

    <Guidance:Wait>
        <Description>
            Wait a moment to see if the scheduler starts a new mission before
            starting to actually run Default.
        </Description>
        <Sequence/>
        <Setting><Guidance:Wait.duration/><Units:second/><Value>13</Value></Setting>
    </Guidance:Wait>

    <Guidance:GoToSurface>
        <Progression/>
    </Guidance:GoToSurface>

    <Aggregate Id="CheckIn">

        <Sequence Repeat="288"/>

        <ReadDatum Id="Read_GPS">
            <Timeout Duration="P5M"/>
            <Universal:time_fix/>
        </ReadDatum>

        <ReadDatum Id="Read_Iridium">
            <Timeout Duration="P2H">
                <Guidance:Execute>
                    <Sequence/>
                    <Setting><Guidance:Execute.command/><String>Burn 300</String></Setting>
                </Guidance:Execute>
                <Syslog Severity="Critical">Dropped weight due to communications timeout.</Syslog>
            </Timeout>
            <Universal:platform_communications/>
        </ReadDatum>

        <Guidance:Wait>
            <Sequence/>
            <Setting><Guidance:Wait.duration/><Units:minute/><Value>5</Value></Setting>
        </Guidance:Wait>

        <Assign><Sequence/><Arg Name="ElapsedSinceDefaultStarted"/><Elapsed><Universal:mission_started/></Elapsed></Assign>

        <Syslog Severity="Important">Default mission has been running for <Arg Name="ElapsedSinceDefaultStarted"/><Units:minute/></Syslog>

    </Aggregate>

    <Syslog Severity="Important">Restarting logs and Default mission.</Syslog>

    <Guidance:Execute>
        <Sequence/>
        <Setting><Guidance:Execute.command/><String>restart logs</String></Setting>
    </Guidance:Execute>

</Mission>


2018-06-01T01:12:07.086Z,1527815527.086 [controlThread](DEBUG): Component order: CycleStarter,AcousticModem_Benthos_ATM900,DataOverHttps,Depth_Keller,DropWeight,NAL9602,Onboard,PNI_TCM,BPC1,Aanderaa_O2,ESPComponent,PAR_Licor,Depth_Keller,PAR_Licor,DepthRateCalculator,PitchRateCalculator,SpeedCalculator,TempGradientCalculator,VerticalTemperatureHomogeneityIndexCalculator,YawRateCalculator,ElevatorOffsetCalculator,StratificationFrontDetector,DeadReckonUsingSpeedCalculator,NavChart,UniversalFixResidualReporter,MissionManager,VerticalControl,HorizontalControl,SpeedControl,LoopControl,BuoyancyServo,ElevatorServo,MassServo,RudderServo,ThrusterServo,SBIT,IBIT,CBIT,Reporter,LogSplitter,
2018-06-01T01:12:07.110Z,1527815527.110 [AcousticModem_Benthos_ATM900](INFO): Powering up
2018-06-01T01:12:07.111Z,1527815527.111 [AcousticModem_Benthos_ATM900](DEBUG): Initializing AcousticModem_Benthos_ATM900.
2018-06-01T01:12:07.135Z,1527815527.135 [DataOverHttps](DEBUG): dashIP=134.89.2.23 starts with a digit so assuming it is a numeric IP
2018-06-01T01:12:07.533Z,1527815527.533 [ESPComponent](INFO): powering down ESP
2018-06-01T01:12:08.101Z,1527815528.101 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2018-06-01T01:12:08.297Z,1527815528.297 [BuoyancyServo](DEBUG): Initializing EZServoServo.
2018-06-01T01:12:08.309Z,1527815528.309 [BuoyancyServo](DEBUG): Initializing BuoyancyServo.
2018-06-01T01:12:08.316Z,1527815528.316 [ElevatorServo](DEBUG): Initializing EZServoServo.
2018-06-01T01:12:08.321Z,1527815528.321 [ElevatorServo](DEBUG): Initializing ElevatorServo.
2018-06-01T01:12:08.345Z,1527815528.345 [MassServo](DEBUG): Initializing EZServoServo.
2018-06-01T01:12:08.353Z,1527815528.353 [MassServo](DEBUG): Initializing MassServo.
2018-06-01T01:12:08.375Z,1527815528.375 [RudderServo](DEBUG): Initializing EZServoServo.
2018-06-01T01:12:08.381Z,1527815528.381 [RudderServo](DEBUG): Initializing RudderServo.
2018-06-01T01:12:08.387Z,1527815528.387 [ThrusterServo](DEBUG): Initializing EZServoServo.
2018-06-01T01:12:08.393Z,1527815528.393 [ThrusterServo](DEBUG): Initializing ThrusterServo.
2018-06-01T01:12:08.442Z,1527815528.442 [CommandLine](FAULT): Scheduling is paused
2018-06-01T01:12:08.442Z,1527815528.442 [CBIT](INFO): Critical error at 20180601T011206
2018-06-01T01:12:08.443Z,1527815528.443 [Supervisor](INFO): Stop Mission called by CBIT::checkCriticals
2018-06-01T01:12:08.590Z,1527815528.590 [DropWeight](CRITICAL): DROP WEIGHT MISSING.

2018-06-01T01:12:08.590Z,1527815528.590 [DropWeight] Hardware Fault, FailCount= 1
2018-06-01T01:12:08.591Z,1527815528.591 [DropWeight](ERROR): Hardware Fault
2018-06-01T01:12:08.671Z,1527815528.671 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2018-06-01T01:12:08.697Z,1527815528.697 [CBIT](INFO): Critical error at 20180601T011208
2018-06-01T01:12:08.699Z,1527815528.699 [CBIT](ERROR): Hardware Fault in component: DropWeight
2018-06-01T01:12:08.700Z,1527815528.700 [CBIT](CRITICAL): Hardware Fault in component: DropWeight
2018-06-01T01:12:08.925Z,1527815528.925 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2018-06-01T01:12:09.258Z,1527815529.258 [BuoyancyServo](ERROR): Buoyancy initialization uart error serial timeout
2018-06-01T01:12:09.258Z,1527815529.258 [BuoyancyServo](FAULT): Buoyancy failed to initialize
2018-06-01T01:12:09.258Z,1527815529.258 [BuoyancyServo] Communications Fault, FailCount= 1
2018-06-01T01:12:09.258Z,1527815529.258 [BuoyancyServo](ERROR): Communications Fault
2018-06-01T01:12:09.463Z,1527815529.463 [CBIT](INFO): Critical error at 20180601T011208
2018-06-01T01:12:09.465Z,1527815529.465 [CBIT](ERROR): Communications Fault in component: BuoyancyServo
2018-06-01T01:12:09.569Z,1527815529.569 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2018-06-01T01:12:09.591Z,1527815529.591 [BuoyancyServo](DEBUG): Uninitialize Buoyancy Servo.
2018-06-01T01:12:09.591Z,1527815529.591 [BuoyancyServo](INFO): Powering down
2018-06-01T01:12:09.957Z,1527815529.957 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2018-06-01T01:12:10.361Z,1527815530.361 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2018-06-01T01:12:10.699Z,1527815530.699 [Aanderaa_O2](INFO): Powering down
2018-06-01T01:12:10.826Z,1527815530.826 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2018-06-01T01:12:10.965Z,1527815530.965 [Rowe_600LCM](INFO): Stopping potential previous instance(s) of Rowe LCM interface
2018-06-01T01:12:11.045Z,1527815531.045 [Rowe_600LCM](INFO): Started Rowe LCM interface with command:nohup ./lrauv-framework/onboard/bin/roweadcp -ldir /mnt/mmc/LRAUV/Logs/latest/ -dev /dev/ttyB4 -b 9600 >& /dev/null &
2018-06-01T01:12:11.220Z,1527815531.220 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2018-06-01T01:12:11.250Z,1527815531.250 [Rowe_600LCM](INFO): LCM subscribed to channel:Rowe_600LCM.adcp_dvl.bottom_track
2018-06-01T01:12:11.251Z,1527815531.251 [Rowe_600LCM](INFO): LCM subscribed to channel:Rowe_600LCM.adcp_dvl.vehicle_water_velocity
2018-06-01T01:12:11.251Z,1527815531.251 [Rowe_600LCM](INFO): LCM subscribed to channel:rowe_dvl.rowe
2018-06-01T01:12:11.736Z,1527815531.736 [CBIT](INFO): Clearing failed state for component BuoyancyServo
2018-06-01T01:12:11.736Z,1527815531.736 [BuoyancyServo] No Fault, FailCount= 1
2018-06-01T01:12:12.033Z,1527815532.033 [BuoyancyServo](DEBUG): Initializing EZServoServo.
2018-06-01T01:12:12.034Z,1527815532.034 [BuoyancyServo](DEBUG): Initializing BuoyancyServo.
2018-06-01T01:12:12.246Z,1527815532.246 [CTD_Seabird](INFO): Stopping potential previous instance(s) of CTD_Seabird LCM interface
2018-06-01T01:12:12.495Z,1527815532.495 [CTD_Seabird](INFO): Started Seabird LCM interface with command:nohup ./lrauv-framework/onboard/bin/gpctd -ldir /mnt/mmc/LRAUV/Logs/latest/ -dev /dev/ttyC6 -b 9600 >& /dev/null &
2018-06-01T01:12:12.496Z,1527815532.496 [CTD_Seabird](INFO): LCM subscribed to channel:ctd_t.seabird-gpctd
2018-06-01T01:12:13.251Z,1527815533.251 [CTD_Seabird](INFO): Stopping potential previous instance(s) of CTD_Seabird LCM interface
2018-06-01T01:12:13.251Z,1527815533.251 [CTD_Seabird](INFO): Powering down
2018-06-01T01:12:14.850Z,1527815534.850 [AcousticModem_Benthos_ATM900](DEBUG): 
2018-06-01T01:12:16.052Z,1527815536.052 [AcousticModem_Benthos_ATM900](DEBUG): Teledyne Benthos ATM-900 Series OEM w/burn wire
2018-06-01T01:12:16.052Z,1527815536.052 [Aco