2017-10-16T23:36:53.464Z,1508197013.464 [Supervisor](DEBUG): Initializing supervisor. 2017-10-16T23:36:53.467Z,1508197013.467 [SyncHandler](DEBUG): Created PCaller Thread at 4051A4E0 2017-10-16T23:36:53.467Z,1508197013.467 [SyncHandler](INFO): Protected caller Thread ID is 3522 2017-10-16T23:36:53.468Z,1508197013.468 [ComponentRegistry](DEBUG): Component "controlThread" handled in its own thread. 2017-10-16T23:36:53.469Z,1508197013.469 [controlThread ThreadHandler](DEBUG): Created PCaller Thread at 4054A4E0 2017-10-16T23:36:53.469Z,1508197013.469 [controlThread ThreadHandler](INFO): Protected caller Thread ID is 3523 2017-10-16T23:36:53.472Z,1508197013.472 [ComponentRegistry](DEBUG): SyncComponent "CycleStarter" handled in the control thread. 2017-10-16T23:36:53.483Z,1508197013.483 [ComponentRegistry](DEBUG): Component "CommandLine" handled in its own thread. 2017-10-16T23:36:53.484Z,1508197013.484 [CommandLine ThreadHandler](DEBUG): Created PCaller Thread at 4057A4E0 2017-10-16T23:36:53.484Z,1508197013.484 [CommandLine ThreadHandler](INFO): Protected caller Thread ID is 3524 2017-10-16T23:36:53.485Z,1508197013.485 [ComponentRegistry](DEBUG): Component "logger" handled in its own thread. 2017-10-16T23:36:53.486Z,1508197013.486 [logger ThreadHandler](DEBUG): Created PCaller Thread at 405AA4E0 2017-10-16T23:36:53.486Z,1508197013.486 [logger ThreadHandler](INFO): Protected caller Thread ID is 3525 2017-10-16T23:36:53.488Z,1508197013.488 [ComponentRegistry](DEBUG): SyncComponent "LogSplitter" handled in the control thread. 2017-10-16T23:36:53.488Z,1508197013.488 [Supervisor](INFO): Looking for Config files in directory: Config/ 2017-10-16T23:36:53.490Z,1508197013.490 [Supervisor](INFO): Opening Config file at: Config/Sample.cfg 2017-10-16T23:36:53.607Z,1508197013.607 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Sample 2017-10-16T23:36:53.608Z,1508197013.608 [Supervisor](INFO): Opening Config file at: Config/workSite.cfg 2017-10-16T23:36:53.790Z,1508197013.790 [ComponentRegistry](DEBUG): Loaded Config Component "Config/workSite 2017-10-16T23:36:53.791Z,1508197013.791 [Supervisor](INFO): Opening Config file at: Config/logger.cfg 2017-10-16T23:36:54.060Z,1508197014.060 [ComponentRegistry](DEBUG): Loaded Config Component "Config/logger 2017-10-16T23:36:54.060Z,1508197014.060 [Supervisor](INFO): Opening Config file at: Config/Science.cfg 2017-10-16T23:36:54.333Z,1508197014.333 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Science 2017-10-16T23:36:54.333Z,1508197014.333 [Supervisor](INFO): Opening Config file at: Config/Control.cfg 2017-10-16T23:36:54.673Z,1508197014.673 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Control 2017-10-16T23:36:54.673Z,1508197014.673 [Supervisor](INFO): Opening Config file at: Config/Simulator.cfg 2017-10-16T23:36:55.141Z,1508197015.141 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Simulator 2017-10-16T23:36:55.141Z,1508197015.141 [Supervisor](INFO): Opening Config file at: Config/Sensor.cfg 2017-10-16T23:36:55.545Z,1508197015.545 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Sensor 2017-10-16T23:36:55.546Z,1508197015.546 [Supervisor](INFO): Opening Config file at: Config/vehicle.cfg 2017-10-16T23:36:56.044Z,1508197016.044 [ComponentRegistry](DEBUG): Loaded Config Component "Config/vehicle 2017-10-16T23:36:56.045Z,1508197016.045 [Supervisor](INFO): Opening Config file at: Config/Guidance.cfg 2017-10-16T23:36:56.145Z,1508197016.145 [Supervisor](INFO): Opening Config file at: Config/Servo.cfg 2017-10-16T23:36:56.442Z,1508197016.442 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Servo 2017-10-16T23:36:56.442Z,1508197016.442 [Supervisor](INFO): Opening Config file at: Config/Derivation.cfg 2017-10-16T23:36:56.589Z,1508197016.589 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Derivation 2017-10-16T23:36:56.589Z,1508197016.589 [Supervisor](INFO): Opening Config file at: Config/Navigation.cfg 2017-10-16T23:36:56.869Z,1508197016.869 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Navigation 2017-10-16T23:36:56.870Z,1508197016.870 [Supervisor](INFO): Opening Config file at: Config/BIT.cfg 2017-10-16T23:36:57.083Z,1508197017.083 [ComponentRegistry](DEBUG): Loaded Config Component "Config/BIT 2017-10-16T23:36:57.084Z,1508197017.084 [Supervisor](INFO): Opening Config file at: Config/secure.cfg 2017-10-16T23:36:57.197Z,1508197017.197 [ComponentRegistry](DEBUG): Loaded Config Component "Config/secure 2017-10-16T23:36:57.197Z,1508197017.197 [Supervisor](INFO): Opening Config file at: Config/Estimation.cfg 2017-10-16T23:36:57.353Z,1508197017.353 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Estimation 2017-10-16T23:36:57.355Z,1508197017.355 [Supervisor](INFO): Looking for Config files in directory: Config/lrauv-makai/ 2017-10-16T23:36:57.356Z,1508197017.356 [Supervisor](INFO): Opening Config file at: Config/lrauv-makai/Battery.cfg 2017-10-16T23:36:57.603Z,1508197017.603 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Battery 2017-10-16T23:36:57.604Z,1508197017.604 [Supervisor](INFO): Opening Config file at: Config/lrauv-makai/logger.cfg 2017-10-16T23:36:57.761Z,1508197017.761 [Supervisor](INFO): Opening Config file at: Config/lrauv-makai/Science.cfg 2017-10-16T23:36:57.971Z,1508197017.971 [Supervisor](INFO): Opening Config file at: Config/lrauv-makai/Control.cfg 2017-10-16T23:36:58.076Z,1508197018.076 [Supervisor](INFO): Opening Config file at: Config/lrauv-makai/Simulator.cfg 2017-10-16T23:36:58.177Z,1508197018.177 [Supervisor](INFO): Opening Config file at: Config/lrauv-makai/Sensor.cfg 2017-10-16T23:36:58.452Z,1508197018.452 [Supervisor](INFO): Opening Config file at: Config/lrauv-makai/vehicle.cfg 2017-10-16T23:36:58.620Z,1508197018.620 [Supervisor](INFO): Opening Config file at: Config/lrauv-makai/Servo.cfg 2017-10-16T23:36:58.734Z,1508197018.734 [Supervisor](INFO): Opening Config file at: Config/lrauv-makai/Navigation.cfg 2017-10-16T23:36:58.911Z,1508197018.911 [Supervisor](INFO): Opening Config file at: Config/lrauv-makai/BIT.cfg 2017-10-16T23:36:59.021Z,1508197019.021 [Supervisor](INFO): Opening Config file at: Config/lrauv-makai/secure.cfg 2017-10-16T23:36:59.118Z,1508197019.118 [Supervisor](INFO): Looking for Config files in directory: Config/lrauv-makai/root/ 2017-10-16T23:36:59.119Z,1508197019.119 [Supervisor](IMPORTANT): Reading configuration overrides from Data/persisted.cfg 2017-10-16T23:36:59.125Z,1508197019.125 [Module Loader](DEBUG): Loading Module at Modules/Simulator.so 2017-10-16T23:36:59.223Z,1508197019.223 [Module Loader](DEBUG): Loaded Module: Simulator (This is the module containing the Simulator) 2017-10-16T23:36:59.223Z,1508197019.223 [Module Loader](DEBUG): Loading Module at Modules/Sample.so 2017-10-16T23:36:59.235Z,1508197019.235 [Module Loader](DEBUG): Loaded Module: Sample (This is a Sample Module of Sample Components) 2017-10-16T23:36:59.236Z,1508197019.236 [Module Loader](DEBUG): Loading Module at Modules/Derivation.so 2017-10-16T23:36:59.261Z,1508197019.261 [DepthRateCalculator] Loaded 2017-10-16T23:36:59.261Z,1508197019.261 [ComponentRegistry](DEBUG): SyncComponent "DepthRateCalculator" handled in the control thread. 2017-10-16T23:36:59.266Z,1508197019.266 [PitchRateCalculator] Loaded 2017-10-16T23:36:59.267Z,1508197019.267 [ComponentRegistry](DEBUG): SyncComponent "PitchRateCalculator" handled in the control thread. 2017-10-16T23:36:59.282Z,1508197019.282 [SpeedCalculator] Loaded 2017-10-16T23:36:59.282Z,1508197019.282 [ComponentRegistry](DEBUG): SyncComponent "SpeedCalculator" handled in the control thread. 2017-10-16T23:36:59.302Z,1508197019.302 [TempGradientCalculator] Loaded 2017-10-16T23:36:59.302Z,1508197019.302 [ComponentRegistry](DEBUG): SyncComponent "TempGradientCalculator" handled in the control thread. 2017-10-16T23:36:59.317Z,1508197019.317 [VerticalTemperatureHomogeneityIndexCalculator] Loaded 2017-10-16T23:36:59.317Z,1508197019.317 [ComponentRegistry](DEBUG): SyncComponent "VerticalTemperatureHomogeneityIndexCalculator" handled in the control thread. 2017-10-16T23:36:59.322Z,1508197019.322 [YawRateCalculator] Loaded 2017-10-16T23:36:59.323Z,1508197019.323 [ComponentRegistry](DEBUG): SyncComponent "YawRateCalculator" handled in the control thread. 2017-10-16T23:36:59.323Z,1508197019.323 [Module Loader](DEBUG): Loaded Module: Derivation (Contains the base derivation components) 2017-10-16T23:36:59.323Z,1508197019.323 [Module Loader](DEBUG): Loading Module at Modules/Trigger.so 2017-10-16T23:36:59.348Z,1508197019.348 [Module Loader](DEBUG): Loaded Module: Trigger (Contains triggers for use in missions) 2017-10-16T23:36:59.348Z,1508197019.348 [Module Loader](DEBUG): Loading Module at Modules/Sensor.so 2017-10-16T23:36:59.606Z,1508197019.606 [DataOverHttps] Loaded 2017-10-16T23:36:59.606Z,1508197019.606 [ComponentRegistry](DEBUG): SyncComponent "DataOverHttps" handled in the control thread. 2017-10-16T23:36:59.630Z,1508197019.630 [Depth_Keller] Loaded 2017-10-16T23:36:59.630Z,1508197019.630 [ComponentRegistry](DEBUG): SyncComponent "Depth_Keller" handled in the control thread. 2017-10-16T23:36:59.645Z,1508197019.645 [Onboard] Loaded 2017-10-16T23:36:59.646Z,1508197019.646 [ComponentRegistry](DEBUG): SyncComponent "Onboard" handled in the control thread. 2017-10-16T23:36:59.655Z,1508197019.655 [Radio_Surface] Loaded 2017-10-16T23:36:59.655Z,1508197019.655 [ComponentRegistry](DEBUG): Component "Radio_Surface" handled in its own thread. 2017-10-16T23:36:59.656Z,1508197019.656 [Radio_Surface ThreadHandler](DEBUG): Created PCaller Thread at 4086C4E0 2017-10-16T23:36:59.657Z,1508197019.657 [Radio_Surface ThreadHandler](INFO): Protected caller Thread ID is 3605 2017-10-16T23:36:59.702Z,1508197019.702 [PNI_TCM] Loaded 2017-10-16T23:36:59.702Z,1508197019.702 [ComponentRegistry](DEBUG): SyncComponent "PNI_TCM" handled in the control thread. 2017-10-16T23:36:59.760Z,1508197019.760 [Rowe_600LCM] Loaded 2017-10-16T23:36:59.760Z,1508197019.760 [ComponentRegistry](DEBUG): Component "Rowe_600LCM" handled in its own thread. 2017-10-16T23:36:59.761Z,1508197019.761 [Rowe_600LCM ThreadHandler](DEBUG): Created PCaller Thread at 4089C4E0 2017-10-16T23:36:59.761Z,1508197019.761 [Rowe_600LCM ThreadHandler](INFO): Protected caller Thread ID is 3606 2017-10-16T23:36:59.762Z,1508197019.762 [Module Loader](DEBUG): Loaded Module: Sensor (Contains the sensor components) 2017-10-16T23:36:59.762Z,1508197019.762 [Module Loader](DEBUG): Loading Module at Modules/BIT.so 2017-10-16T23:36:59.888Z,1508197019.888 [SBIT](DEBUG): Construct Startup Built In Test. 2017-10-16T23:36:59.912Z,1508197019.912 [SBIT] Loaded 2017-10-16T23:36:59.913Z,1508197019.913 [ComponentRegistry](DEBUG): SyncComponent "SBIT" handled in the control thread. 2017-10-16T23:36:59.913Z,1508197019.913 [IBIT](DEBUG): Construct Initiated Built In Test. 2017-10-16T23:36:59.932Z,1508197019.932 [IBIT] Loaded 2017-10-16T23:36:59.933Z,1508197019.933 [ComponentRegistry](DEBUG): SyncComponent "IBIT" handled in the control thread. 2017-10-16T23:36:59.936Z,1508197019.936 [CBIT](DEBUG): Construct Continuous Built In Test. 2017-10-16T23:37:00.077Z,1508197020.077 [CBIT] Loaded 2017-10-16T23:37:00.077Z,1508197020.077 [ComponentRegistry](DEBUG): SyncComponent "CBIT" handled in the control thread. 2017-10-16T23:37:00.078Z,1508197020.078 [Module Loader](DEBUG): Loaded Module: BIT (Contains the BuiltInTest components, such as C Built In Test) 2017-10-16T23:37:00.078Z,1508197020.078 [Module Loader](DEBUG): Loading Module at Modules/Science.so 2017-10-16T23:37:00.207Z,1508197020.207 [Aanderaa_O2] Loaded 2017-10-16T23:37:00.207Z,1508197020.207 [ComponentRegistry](DEBUG): SyncComponent "Aanderaa_O2" handled in the control thread. 2017-10-16T23:37:00.282Z,1508197020.282 [CTD_NeilBrown] Loaded 2017-10-16T23:37:00.282Z,1508197020.282 [ComponentRegistry](DEBUG): Component "CTD_NeilBrown" handled in its own thread. 2017-10-16T23:37:00.283Z,1508197020.283 [CTD_NeilBrown ThreadHandler](DEBUG): Created PCaller Thread at 4095C4E0 2017-10-16T23:37:00.283Z,1508197020.283 [CTD_NeilBrown ThreadHandler](INFO): Protected caller Thread ID is 3607 2017-10-16T23:37:00.299Z,1508197020.299 [ESPComponent] Loaded 2017-10-16T23:37:00.299Z,1508197020.299 [ComponentRegistry](DEBUG): SyncComponent "ESPComponent" handled in the control thread. 2017-10-16T23:37:00.312Z,1508197020.312 [PAR_Licor] Loaded 2017-10-16T23:37:00.312Z,1508197020.312 [ComponentRegistry](DEBUG): SyncComponent "PAR_Licor" handled in the control thread. 2017-10-16T23:37:00.358Z,1508197020.358 [WetLabsBB2FL] Loaded 2017-10-16T23:37:00.358Z,1508197020.358 [ComponentRegistry](DEBUG): Component "WetLabsBB2FL" handled in its own thread. 2017-10-16T23:37:00.359Z,1508197020.359 [WetLabsBB2FL ThreadHandler](DEBUG): Created PCaller Thread at 4098C4E0 2017-10-16T23:37:00.360Z,1508197020.360 [WetLabsBB2FL ThreadHandler](INFO): Protected caller Thread ID is 3608 2017-10-16T23:37:00.360Z,1508197020.360 [Module Loader](DEBUG): Loaded Module: Science (Contains the science components) 2017-10-16T23:37:00.361Z,1508197020.361 [Module Loader](DEBUG): Loading Module at Modules/Guidance.so 2017-10-16T23:37:00.589Z,1508197020.589 [Module Loader](DEBUG): Loaded Module: Guidance (Contains behaviors and commands) 2017-10-16T23:37:00.590Z,1508197020.590 [Module Loader](DEBUG): Loading Module at Modules/Control.so 2017-10-16T23:37:00.656Z,1508197020.656 [VerticalControl](DEBUG): Construct VerticalControl. 2017-10-16T23:37:00.747Z,1508197020.747 [VerticalControl] Loaded 2017-10-16T23:37:00.748Z,1508197020.748 [ComponentRegistry](DEBUG): SyncComponent "VerticalControl" handled in the control thread. 2017-10-16T23:37:00.748Z,1508197020.748 [HorizontalControl](DEBUG): Construct HorizontalControl. 2017-10-16T23:37:00.805Z,1508197020.805 [HorizontalControl] Loaded 2017-10-16T23:37:00.806Z,1508197020.806 [ComponentRegistry](DEBUG): SyncComponent "HorizontalControl" handled in the control thread. 2017-10-16T23:37:00.806Z,1508197020.806 [SpeedControl](DEBUG): Construct SpeedControl. 2017-10-16T23:37:00.811Z,1508197020.811 [SpeedControl] Loaded 2017-10-16T23:37:00.812Z,1508197020.812 [ComponentRegistry](DEBUG): SyncComponent "SpeedControl" handled in the control thread. 2017-10-16T23:37:00.812Z,1508197020.812 [LoopControl](DEBUG): Construct LoopControl. 2017-10-16T23:37:00.813Z,1508197020.813 [LoopControl] Loaded 2017-10-16T23:37:00.813Z,1508197020.813 [ComponentRegistry](DEBUG): SyncComponent "LoopControl" handled in the control thread. 2017-10-16T23:37:00.813Z,1508197020.813 [Module Loader](DEBUG): Loaded Module: Control (Contains the Control components, such as Depth, Heading, and Speed Control) 2017-10-16T23:37:00.814Z,1508197020.814 [Module Loader](DEBUG): Loading Module at Modules/Estimation.so 2017-10-16T23:37:00.893Z,1508197020.893 [StratificationFrontDetector](INFO): threshold set to: 0.399988 degC 2017-10-16T23:37:00.893Z,1508197020.893 [StratificationFrontDetector](DEBUG): (re)initializing 2017-10-16T23:37:00.893Z,1508197020.893 [StratificationFrontDetector] Loaded 2017-10-16T23:37:00.893Z,1508197020.893 [ComponentRegistry](DEBUG): SyncComponent "StratificationFrontDetector" handled in the control thread. 2017-10-16T23:37:00.894Z,1508197020.894 [Module Loader](DEBUG): Loaded Module: Estimation (Contains the base estimation components) 2017-10-16T23:37:00.894Z,1508197020.894 [Module Loader](DEBUG): Loading Module at Modules/Servo.so 2017-10-16T23:37:00.989Z,1508197020.989 [BuoyancyServo] Loaded 2017-10-16T23:37:00.989Z,1508197020.989 [ComponentRegistry](DEBUG): SyncComponent "BuoyancyServo" handled in the control thread. 2017-10-16T23:37:00.000Z,1508197021.000 [ElevatorServo] Loaded 2017-10-16T23:37:00.000Z,1508197021.000 [ComponentRegistry](DEBUG): SyncComponent "ElevatorServo" handled in the control thread. 2017-10-16T23:37:01.010Z,1508197021.010 [RudderServo] Loaded 2017-10-16T23:37:01.010Z,1508197021.010 [ComponentRegistry](DEBUG): SyncComponent "RudderServo" handled in the control thread. 2017-10-16T23:37:01.020Z,1508197021.020 [ThrusterServo] Loaded 2017-10-16T23:37:01.021Z,1508197021.021 [ComponentRegistry](DEBUG): SyncComponent "ThrusterServo" handled in the control thread. 2017-10-16T23:37:01.021Z,1508197021.021 [Module Loader](DEBUG): Loaded Module: Servo (This is the module containing motor controllers) 2017-10-16T23:37:01.021Z,1508197021.021 [Module Loader](DEBUG): Loading Module at Modules/Navigation.so 2017-10-16T23:37:01.115Z,1508197021.115 [DeadReckonUsingMultipleVelocitySources] Loaded 2017-10-16T23:37:01.115Z,1508197021.115 [ComponentRegistry](DEBUG): SyncComponent "DeadReckonUsingMultipleVelocitySources" handled in the control thread. 2017-10-16T23:37:01.167Z,1508197021.167 [DeadReckonUsingSpeedCalculator] Loaded 2017-10-16T23:37:01.167Z,1508197021.167 [ComponentRegistry](DEBUG): SyncComponent "DeadReckonUsingSpeedCalculator" handled in the control thread. 2017-10-16T23:37:01.183Z,1508197021.183 [NavChart] Loaded 2017-10-16T23:37:01.183Z,1508197021.183 [ComponentRegistry](DEBUG): SyncComponent "NavChart" handled in the control thread. 2017-10-16T23:37:01.186Z,1508197021.186 [UniversalFixResidualReporter] Loaded 2017-10-16T23:37:01.187Z,1508197021.187 [ComponentRegistry](DEBUG): SyncComponent "UniversalFixResidualReporter" handled in the control thread. 2017-10-16T23:37:01.187Z,1508197021.187 [Module Loader](DEBUG): Loaded Module: Navigation (Contains the base navigation components) 2017-10-16T23:37:01.191Z,1508197021.191 [ComponentRegistry](DEBUG): SyncComponent "MissionManager" handled in the control thread. 2017-10-16T23:37:01.191Z,1508197021.191 [ComponentRegistry](DEBUG): SyncComponent "Reporter" handled in the control thread. 2017-10-16T23:37:01.198Z,1508197021.198 [ComponentRegistry](DEBUG): Component "NavChartDb" handled in its own thread. 2017-10-16T23:37:01.199Z,1508197021.199 [NavChartDb ThreadHandler](DEBUG): Created PCaller Thread at 40AD84E0 2017-10-16T23:37:01.200Z,1508197021.200 [NavChartDb ThreadHandler](INFO): Protected caller Thread ID is 3609 2017-10-16T23:37:01.217Z,1508197021.217 [Supervisor](INFO): Main Thread ID is 3521 2017-10-16T23:37:01.217Z,1508197021.217 [Supervisor](DEBUG): Running supervisor. 2017-10-16T23:37:01.217Z,1508197021.217 [CommandLine ThreadHandler](INFO): Handler Thread ID is 3610 2017-10-16T23:37:01.220Z,1508197021.220 [controlThread ThreadHandler](INFO): Handler Thread ID is 3611 2017-10-16T23:37:01.221Z,1508197021.221 [controlThread](DEBUG): Initializing ControlThread 2017-10-16T23:37:01.221Z,1508197021.221 [DepthRateCalculator](DEBUG): Initializing DepthRateCalculator. 2017-10-16T23:37:01.222Z,1508197021.222 [PitchRateCalculator](DEBUG): Initializing PitchRateCalculator. 2017-10-16T23:37:01.222Z,1508197021.222 [SpeedCalculator](DEBUG): Initializing SpeedCalculator. 2017-10-16T23:37:01.222Z,1508197021.222 [TempGradientCalculator](DEBUG): Initializing TempGradientCalculator. 2017-10-16T23:37:01.223Z,1508197021.223 [VerticalTemperatureHomogeneityIndexCalculator](DEBUG): (re)initializing 2017-10-16T23:37:01.224Z,1508197021.224 [YawRateCalculator](DEBUG): Initializing YawRateCalculator. 2017-10-16T23:37:01.228Z,1508197021.228 [SBIT](INFO): Initialize SBIT Component. 2017-10-16T23:37:01.229Z,1508197021.229 [SBIT](IMPORTANT): git: 2017-09-28-16-gfc4d8dc 2017-10-16T23:37:01.229Z,1508197021.229 [SBIT](INFO): git hash: fc4d8dc974620f9f70b7e6a619a5c2ec703a2a71 2017-10-16T23:37:01.229Z,1508197021.229 [SBIT](IMPORTANT): Kernel Release: 2.6.27.8 2017-10-16T23:37:01.230Z,1508197021.230 [SBIT](INFO): Kernel Reporting Different Version From Configuration. Kernel Expected: #639 PREEMPT Wed Mar 12 12:53:33 PDT 2014 Kernel Reported: #2 PREEMPT Tue Oct 3 09:53:58 PDT 2017 2017-10-16T23:37:01.231Z,1508197021.231 [SBIT](INFO): Beginning SBIT in 63.000000 seconds. 2017-10-16T23:37:01.232Z,1508197021.232 [IBIT](INFO): Initialize IBIT Component. 2017-10-16T23:37:01.233Z,1508197021.233 [CBIT](DEBUG): Initialize CBIT Component. 2017-10-16T23:37:01.233Z,1508197021.233 [CBIT](INFO): Last reboot was NOT due to watchdog timer. 2017-10-16T23:37:01.234Z,1508197021.234 [logger ThreadHandler](INFO): Handler Thread ID is 3612 2017-10-16T23:37:01.237Z,1508197021.237 [Radio_Surface ThreadHandler](INFO): Handler Thread ID is 3613 2017-10-16T23:37:01.244Z,1508197021.244 [Radio_Surface](INFO): Powering up 2017-10-16T23:37:01.260Z,1508197021.260 [Rowe_600LCM ThreadHandler](INFO): Handler Thread ID is 3614 2017-10-16T23:37:01.260Z,1508197021.260 [Rowe_600LCM](INFO): Initializing 2017-10-16T23:37:01.261Z,1508197021.261 [Rowe_600LCM](INFO): Checking LCM 2017-10-16T23:37:01.269Z,1508197021.269 [Rowe_600LCM](INFO): LCM OK 2017-10-16T23:37:01.269Z,1508197021.269 [Rowe_600LCM](INFO): Powering up 2017-10-16T23:37:01.277Z,1508197021.277 [CTD_NeilBrown ThreadHandler](INFO): Handler Thread ID is 3615 2017-10-16T23:37:01.277Z,1508197021.277 [CTD_NeilBrown](INFO): Powering down 2017-10-16T23:37:01.292Z,1508197021.292 [WetLabsBB2FL ThreadHandler](INFO): Handler Thread ID is 3616 2017-10-16T23:37:01.293Z,1508197021.293 [WetLabsBB2FL](INFO): Powering down 2017-10-16T23:37:01.324Z,1508197021.324 [VerticalControl](DEBUG): Initialize VerticalControlComponent. 2017-10-16T23:37:01.325Z,1508197021.325 [HorizontalControl](DEBUG): Initialize HorizontalControlComponent. 2017-10-16T23:37:01.326Z,1508197021.326 [SpeedControl](DEBUG): Initialize SpeedControlComponent. 2017-10-16T23:37:01.327Z,1508197021.327 [LoopControl](DEBUG): Initialize LoopControlComponent. 2017-10-16T23:37:01.328Z,1508197021.328 [DeadReckonUsingMultipleVelocitySources](DEBUG): Initializing DeadReckonUsingMultipleVelocitySources component. 2017-10-16T23:37:01.329Z,1508197021.329 [DeadReckonUsingMultipleVelocitySources](INFO): Will consider orientation measurement stale after 120s. 2017-10-16T23:37:01.329Z,1508197021.329 [DeadReckonUsingMultipleVelocitySources](INFO): Will consider velocity measurement stale after 20s. 2017-10-16T23:37:01.330Z,1508197021.330 [DeadReckonUsingSpeedCalculator](DEBUG): Initializing DeadReckonUsingSpeedCalculator component. 2017-10-16T23:37:01.330Z,1508197021.330 [DeadReckonUsingSpeedCalculator](INFO): Will consider orientation measurement stale after 120s. 2017-10-16T23:37:01.330Z,1508197021.330 [DeadReckonUsingSpeedCalculator](INFO): Will consider velocity measurement stale after 20s. 2017-10-16T23:37:01.331Z,1508197021.331 [NavChart](DEBUG): Initialize NavChart Navigation. 2017-10-16T23:37:01.331Z,1508197021.331 [UniversalFixResidualReporter](DEBUG): Initializing UniversalFixResidualReporter component. 2017-10-16T23:37:01.332Z,1508197021.332 [MissionManager](INFO): Loading Mission: Missions/Startup.xml 2017-10-16T23:37:01.353Z,1508197021.353 [NavChartDb ThreadHandler](INFO): Handler Thread ID is 3617 2017-10-16T23:37:01.357Z,1508197021.357 [NavChartDb](INFO): Looking for Electronic Nav Chart file at: Resources/ElectronicNavigationCharts/US1WC07M.000 2017-10-16T23:37:01.357Z,1508197021.357 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US1WC07M.000 2017-10-16T23:37:01.357Z,1508197021.357 [NavChartDb](INFO): Looking for Electronic Nav Chart file at: Resources/ElectronicNavigationCharts/US2WC11M.000 2017-10-16T23:37:01.357Z,1508197021.357 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US2WC11M.000 2017-10-16T23:37:01.358Z,1508197021.358 [NavChartDb](INFO): Looking for Electronic Nav Chart file at: Resources/ElectronicNavigationCharts/US3CA52M.000 2017-10-16T23:37:01.358Z,1508197021.358 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US3CA52M.000 2017-10-16T23:37:01.358Z,1508197021.358 [NavChartDb](INFO): Looking for Electronic Nav Chart file at: Resources/ElectronicNavigationCharts/US4CA60M.000 2017-10-16T23:37:01.358Z,1508197021.358 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US4CA60M.000 2017-10-16T23:37:01.358Z,1508197021.358 [NavChartDb](INFO): Looking for Electronic Nav Chart file at: Resources/ElectronicNavigationCharts/US5CA50M.000 2017-10-16T23:37:01.358Z,1508197021.358 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA50M.000 2017-10-16T23:37:01.359Z,1508197021.359 [NavChartDb](INFO): Looking for Electronic Nav Chart file at: Resources/ElectronicNavigationCharts/US5CA61M.000 2017-10-16T23:37:01.359Z,1508197021.359 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA61M.000 2017-10-16T23:37:01.359Z,1508197021.359 [NavChartDb](INFO): Looking for Electronic Nav Chart file at: Resources/ElectronicNavigationCharts/US5CA62M.000 2017-10-16T23:37:01.359Z,1508197021.359 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA62M.000 2017-10-16T23:37:01.360Z,1508197021.360 [NavChartDb](INFO): Looking for Electronic Nav Chart file at: Resources/ElectronicNavigationCharts/US5CA83M.000 2017-10-16T23:37:01.360Z,1508197021.360 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA83M.000 2017-10-16T23:37:01.379Z,1508197021.379 [Startup:A.GoToSurface](DEBUG): Construct GoToSurface. 2017-10-16T23:37:01.416Z,1508197021.416 [MissionManager](DEBUG): 2017-10-16T23:37:01.417Z,1508197021.417 [MissionManager](INFO): Loading Mission: Missions/Default.xml 2017-10-16T23:37:01.471Z,1508197021.471 [MissionManager](INFO): DefineArg Default.ElapsedSinceDefaultStarted = 0.000000 min 2017-10-16T23:37:01.477Z,1508197021.477 [Default:A.Wait](DEBUG): Construct Wait. 2017-10-16T23:37:01.479Z,1508197021.479 [Default:B.GoToSurface](DEBUG): Construct GoToSurface. 2017-10-16T23:37:01.500Z,1508197021.500 [Default:CheckIn:Read_Iridium:A_Timeout:A.Execute](DEBUG): Construct Execute. 2017-10-16T23:37:01.502Z,1508197021.502 [Default:CheckIn:C.Wait](DEBUG): Construct Wait. 2017-10-16T23:37:01.516Z,1508197021.516 [Default:E.Execute](DEBUG): Construct Execute. 2017-10-16T23:37:01.519Z,1508197021.519 [MissionManager](DEBUG): 0 Wait a moment to see if the scheduler starts a new mission before starting to actually run Default. 13 Burn 300 Dropped weight due to communications timeout. 5 Default mission has been running for Restarting logs and Default mission. restart logs 2017-10-16T23:37:01.528Z,1508197021.528 [controlThread](DEBUG): Component order: CycleStarter,DataOverHttps,Depth_Keller,Onboard,PNI_TCM,Aanderaa_O2,ESPComponent,PAR_Licor,Depth_Keller,PAR_Licor,DepthRateCalculator,PitchRateCalculator,SpeedCalculator,TempGradientCalculator,VerticalTemperatureHomogeneityIndexCalculator,YawRateCalculator,StratificationFrontDetector,DeadReckonUsingMultipleVelocitySources,DeadReckonUsingSpeedCalculator,NavChart,UniversalFixResidualReporter,MissionManager,VerticalControl,HorizontalControl,SpeedControl,LoopControl,BuoyancyServo,ElevatorServo,RudderServo,ThrusterServo,SBIT,IBIT,CBIT,Reporter,LogSplitter, 2017-10-16T23:37:01.584Z,1508197021.584 [DataOverHttps](DEBUG): dashIP=134.89.2.23 starts with a digit so assuming it is a numeric IP 2017-10-16T23:37:01.785Z,1508197021.785 [ESPComponent](INFO): powering down ESP 2017-10-16T23:37:02.312Z,1508197022.312 [DeadReckonUsingMultipleVelocitySources](DEBUG): Starting up and don't have orientation data yet. 2017-10-16T23:37:02.336Z,1508197022.336 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet. 2017-10-16T23:37:02.432Z,1508197022.432 [BuoyancyServo](DEBUG): Initializing EZServoServo. 2017-10-16T23:37:02.440Z,1508197022.440 [BuoyancyServo](DEBUG): Initializing BuoyancyServo. 2017-10-16T23:37:02.454Z,1508197022.454 [ElevatorServo](DEBUG): Initializing EZServoServo. 2017-10-16T23:37:02.460Z,1508197022.460 [ElevatorServo](DEBUG): Initializing ElevatorServo. 2017-10-16T23:37:02.481Z,1508197022.481 [RudderServo](DEBUG): Initializing EZServoServo. 2017-10-16T23:37:02.488Z,1508197022.488 [RudderServo](DEBUG): Initializing RudderServo. 2017-10-16T23:37:02.501Z,1508197022.501 [ThrusterServo](DEBUG): Initializing EZServoServo. 2017-10-16T23:37:02.508Z,1508197022.508 [ThrusterServo](DEBUG): Initializing ThrusterServo. 2017-10-16T23:37:02.781Z,1508197022.781 [DeadReckonUsingMultipleVelocitySources](DEBUG): Starting up and don't have orientation data yet. 2017-10-16T23:37:02.782Z,1508197022.782 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet. 2017-10-16T23:37:05.581Z,1508197025.581 [Rowe_600LCM](INFO): Stopping potential previous instance(s) of Rowe LCM interface 2017-10-16T23:37:05.683Z,1508197025.683 [Rowe_600LCM](INFO): Started Rowe LCM interface with command:nohup ./lrauv-framework/onboard/bin/roweadcp -ldir /mnt/mmc/LRAUV/Logs/latest/ -dev /dev/ttyB4 -b 38400 >& /dev/null & 2017-10-16T23:37:05.770Z,1508197025.770 [Rowe_600LCM](INFO): LCM subscribed to channel:Rowe_600LCM.adcp_dvl.bottom_track 2017-10-16T23:37:05.771Z,1508197025.771 [Rowe_600LCM](INFO): LCM subscribed to channel:Rowe_600LCM.adcp_dvl.vehicle_water_velocity 2017-10-16T23:37:05.788Z,1508197025.788 [Rowe_600LCM](INFO): LCM subscribed to channel:rowe_dvl.rowe 2017-10-16T23:37:11.867Z,1508197031.867 [Aanderaa_O2](DEBUG): Error parsing data: StartupInfo 4831F 14 Mode AADI Smart Sensor Terminal Protocol RS232 Protocol Version 3 Config Version 12 2017-10-16T23:37:11.867Z,1508197031.867 [Aanderaa_O2] Data Fault, FailCount= 1 2017-10-16T23:37:11.868Z,1508197031.868 [Aanderaa_O2](ERROR): Data Fault 2017-10-16T23:37:11.913Z,1508197031.913 [DeadReckonUsingMultipleVelocitySources](DEBUG): Starting up and don't have orientation data yet. 2017-10-16T23:37:11.914Z,1508197031.914 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet. 2017-10-16T23:37:12.207Z,1508197032.207 [CBIT](ERROR): Data Fault in component: Aanderaa_O2 2017-10-16T23:37:12.266Z,1508197032.266 [Aanderaa_O2](INFO): Powering down 2017-10-16T23:37:12.340Z,1508197032.340 [DeadReckonUsingMultipleVelocitySources](DEBUG): Starting up and don't have orientation data yet. 2017-10-16T23:37:12.341Z,1508197032.341 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet. 2017-10-16T23:37:12.703Z,1508197032.703 [DeadReckonUsingMultipleVelocitySources](DEBUG): Starting up and don't have orientation data yet. 2017-10-16T23:37:12.704Z,1508197032.704 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet. 2017-10-16T23:37:13.019Z,1508197033.019 [DataOverHttps](INFO): setting available, lastComms_.elapsed()=0.003684 2017-10-16T23:37:13.053Z,1508197033.053 [DeadReckonUsingMultipleVelocitySources](DEBUG): Starting up and don't have orientation data yet. 2017-10-16T23:37:13.054Z,1508197033.054 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet. 2017-10-16T23:37:13.086Z,1508197033.086 [CBIT](INFO): Clearing failed state for component Aanderaa_O2 2017-10-16T23:37:13.086Z,1508197033.086 [Aanderaa_O2] No Fault, FailCount= 1 2017-10-16T23:37:13.496Z,1508197033.496 [DeadReckonUsingMultipleVelocitySources](DEBUG): Starting up and don't have orientation data yet. 2017-10-16T23:37:13.497Z,1508197033.497 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet. 2017-10-16T23:37:13.901Z,1508197033.901 [DeadReckonUsingMultipleVelocitySources](DEBUG): Starting up and don't have orientation data yet. 2017-10-16T23:37:13.904Z,1508197033.904 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet. 2017-10-16T23:37:15.065Z,1508197035.065 [Aanderaa_O2](DEBUG): Error parsing data: StartupInfo 4831F 14 Mode AADI Smart Sensor Terminal Protocol RS232 Protocol Version 3 Config Version 12 2017-10-16T23:37:15.065Z,1508197035.065 [Aanderaa_O2] Data Fault, FailCount= 2 2017-10-16T23:37:15.065Z,1508197035.065 [Aanderaa_O2](ERROR): Data Fault 2017-10-16T23:37:15.314Z,1508197035.314 [CBIT](ERROR): Data Fault in component: Aanderaa_O2 2017-10-16T23:37:15.455Z,1508197035.455 [Aanderaa_O2](INFO): Powering down 2017-10-16T23:37:16.381Z,1508197036.381 [CBIT](INFO): Clearing failed state for component Aanderaa_O2 2017-10-16T23:37:16.381Z,1508197036.381 [Aanderaa_O2] No Fault, FailCount= 2 2017-10-16T23:37:18.254Z,1508197038.254 [Aanderaa_O2](DEBUG): Error parsing data: StartupInfo 4831F 14 Mode AADI Smart Sensor Terminal Protocol RS232 Protocol Version 3 Config Version 12 2017-10-16T23:37:18.254Z,1508197038.254 [Aanderaa_O2] Data Fault, FailCount= 3 2017-10-16T23:37:18.254Z,1508197038.254 [Aanderaa_O2](ERROR): Data Fault 2017-10-16T23:37:18.307Z,1508197038.307 [CBIT](ERROR): Data Fault in component: Aanderaa_O2 2017-10-16T23:37:18.308Z,1508197038.308 [CBIT](FAULT): Data Fault in component: Aanderaa_O2 2017-10-16T23:37:18.647Z,1508197038.647 [Aanderaa_O2](INFO): Powering down 2017-10-16T23:38:05.623Z,1508197085.623 [SBIT](IMPORTANT): Beginning Startup BIT 2017-10-16T23:38:05.628Z,1508197085.628 [CBIT](IMPORTANT): Beginning ground fault scan 2017-10-16T23:38:12.985Z,1508197092.985 [CommandLine](IMPORTANT): got command report mod WetLabsBB2FL.durationOfLastRun 2017-10-16T23:38:13.264Z,1508197093.264 [Reporter](INFO): WetLabsBB2FL.durationOfLastRun no_value 2017-10-16T23:38:15.985Z,1508197095.985 [CBIT](IMPORTANT): No ground fault detected mA: CHAN A0 (Batt): -0.007656 CHAN A1 (24V): 0.004016 CHAN A2 (12V): -0.005214 CHAN A3 (5V): -0.002163 CHAN B0 (3.3V): -0.000999 CHAN B1 (3.15aV): -0.001372 CHAN B2 (3.15bV): -0.000723 CHAN B3 (GND): 0.000158 OPEN: 0.004677 Full Scale Calc: 4.765 mA, -1.589 mA 2017-10-16T23:38:18.796Z,1508197098.796 [SBIT](ERROR): Could not read massPosReader_. 2017-10-16T23:38:45.622Z,1508197125.622 [SBIT](ERROR): Could not read massPosReader_. 2017-10-16T23:38:45.622Z,1508197125.622 [SBIT](FAULT): Control surface position failure. 2017-10-16T23:38:59.171Z,1508197139.171 [SBIT](ERROR): Could not read massPosReader_. 2017-10-16T23:38:59.171Z,1508197139.171 [SBIT](FAULT): Control surface position failure. 2017-10-16T23:38:59.578Z,1508197139.578 [SBIT](CRITICAL): SBIT FAILED 2017-10-16T23:38:59.579Z,1508197139.579 [CommandLine](FAULT): Scheduling is paused 2017-10-16T23:38:59.579Z,1508197139.579 [CBIT](INFO): Critical error at 20171016T233859 2017-10-16T23:38:59.580Z,1508197139.580 [Supervisor](INFO): Stop Mission called by CBIT::checkCriticals 2017-10-16T23:38:59.980Z,1508197139.980 [MissionManager](IMPORTANT): Started mission Startup 2017-10-16T23:38:59.980Z,1508197139.980 [Startup] Running Loop=1 2017-10-16T23:38:59.980Z,1508197139.980 [Startup](DEBUG): Aggregate::initialize Startup 2017-10-16T23:38:59.980Z,1508197139.980 [Startup:A.GoToSurface] Running Loop=1 2017-10-16T23:38:59.980Z,1508197139.980 [Startup:A.GoToSurface](DEBUG): Initialize GoToSurfaceComponent. 2017-10-16T23:38:59.981Z,1508197139.981 [Startup:A.GoToSurface](DEBUG): No depth rate setting specified. Using default value of nan m/s. 2017-10-16T23:38:59.981Z,1508197139.981 [Startup:A.GoToSurface](DEBUG): No pitch setting specified. Using default value of nan degrees. 2017-10-16T23:38:59.981Z,1508197139.981 [Startup:A.GoToSurface](DEBUG): No speed setting specified. Using default value of 1.000000 m/s. 2017-10-16T23:38:59.982Z,1508197139.982 [Startup:A.GoToSurface](DEBUG): No pitch timeout specified. Using default value of 20.000000 seconds. 2017-10-16T23:38:59.982Z,1508197139.982 [Startup:A.GoToSurface](DEBUG): No surface timeout specified. Using default value of 1000.000000 seconds. 2017-10-16T23:38:59.987Z,1508197139.987 [Startup:StartupSatComms] Running Loop=1 2017-10-16T23:38:59.988Z,1508197139.988 [Startup:StartupSatComms](DEBUG): Aggregate::initialize Startup:StartupSatComms 2017-10-16T23:38:59.988Z,1508197139.988 [Startup:StartupSatComms:A] Running Loop=1 2017-10-16T23:39:00.387Z,1508197140.387 [Startup:StartupSatComms:A](DEBUG): Initialize ReadDataComponent to sense latitude_fix 2017-10-16T23:39:02.039Z,1508197142.039 [Rowe_600LCM](FAULT): Did not receive valid device response within the specified allowable sample time. 2017-10-16T23:39:02.039Z,1508197142.039 [Rowe_600LCM] Communications Fault, FailCount= 1 2017-10-16T23:39:02.040Z,1508197142.040 [Rowe_600LCM](ERROR): Communications Fault 2017-10-16T23:39:02.386Z,1508197142.386 [CBIT](ERROR): Communications Fault in component: Rowe_600LCM 2017-10-16T23:39:02.456Z,1508197142.456 [Rowe_600LCM](INFO): Stopping potential previous instance(s) of roweadcp LCM interface 2017-10-16T23:39:02.576Z,1508197142.576 [Rowe_600LCM](INFO): Powering down 2017-10-16T23:39:05.588Z,1508197145.588 [CBIT](INFO): Clearing failed state for component Rowe_600LCM 2017-10-16T23:39:05.588Z,1508197145.588 [Rowe_600LCM] No Fault, FailCount= 1 2017-10-16T23:39:05.848Z,1508197145.848 [Rowe_600LCM](INFO): Initializing 2017-10-16T23:39:05.848Z,1508197145.848 [Rowe_600LCM](INFO): Checking LCM 2017-10-16T23:39:05.848Z,1508197145.848 [Rowe_600LCM](INFO): LCM OK 2017-10-16T23:39:05.848Z,1508197145.848 [Rowe_600LCM](INFO): Powering up 2017-10-16T23:39:08.144Z,1508197148.144 [CommandLine](IMPORTANT): got command report mod WetLabsBB2FL.mass_concentration_of_chlorophyll_in_sea_water 2017-10-16T23:39:08.454Z,1508197148.454 [Reporter](INFO): WetLabsBB2FL.mass_concentration_of_chlorophyll_in_sea_water no_value 2017-10-16T23:39:09.973Z,1508197149.973 [Rowe_600LCM](INFO): Stopping potential previous instance(s) of Rowe LCM interface 2017-10-16T23:39:10.087Z,1508197150.087 [Rowe_600LCM](INFO): Started Rowe LCM interface with command:nohup ./lrauv-framework/onboard/bin/roweadcp -ldir /mnt/mmc/LRAUV/Logs/latest/ -dev /dev/ttyB4 -b 38400 >& /dev/null & 2017-10-16T23:39:10.088Z,1508197150.088 [Rowe_600LCM](INFO): LCM subscribed to channel:Rowe_600LCM.adcp_dvl.bottom_track 2017-10-16T23:39:10.089Z,1508197150.089 [Rowe_600LCM](INFO): LCM subscribed to channel:Rowe_600LCM.adcp_dvl.vehicle_water_velocity 2017-10-16T23:39:10.090Z,1508197150.090 [Rowe_600LCM](INFO): LCM subscribed to channel:rowe_dvl.rowe 2017-10-16T23:39:28.833Z,1508197168.833 [CommandLine](IMPORTANT): got command show 2017-10-16T23:39:28.833Z,1508197168.833 [CommandLine](FAULT): Incomplete syntax. Try: help show 2017-10-16T23:39:32.729Z,1508197172.729 [CommandLine](IMPORTANT): got command show stack 2017-10-16T23:39:32.729Z,1508197172.729 [CommandLine](IMPORTANT): Behavior Stack: 2017-10-16T23:39:32.730Z,1508197172.730 [Startup](IMPORTANT): Priority 0: Startup:A.GoToSurface 2017-10-16T23:39:32.730Z,1508197172.730 [Startup:StartupSatComms](IMPORTANT): Priority 1: Startup:StartupSatComms:A 2017-10-16T23:39:48.447Z,1508197188.447 [CBIT](INFO): Clearing failed state for component Aanderaa_O2 2017-10-16T23:39:48.447Z,1508197188.447 [Aanderaa_O2] No Fault, FailCount= 3 2017-10-16T23:39:50.428Z,1508197190.428 [Aanderaa_O2](DEBUG): Error parsing data: StartupInfo 4831F 14 Mode AADI Smart Sensor Terminal Protocol RS232 Protocol Version 3 Config Version 12 2017-10-16T23:39:50.428Z,1508197190.428 [Aanderaa_O2] Data Fault, FailCount= 1 2017-10-16T23:39:50.428Z,1508197190.428 [Aanderaa_O2](ERROR): Data Fault 2017-10-16T23:39:50.470Z,1508197190.470 [CBIT](ERROR): Data Fault in component: Aanderaa_O2 2017-10-16T23:39:50.936Z,1508197190.936 [Aanderaa_O2](INFO): Powering down 2017-10-16T23:39:51.650Z,1508197191.650 [CBIT](INFO): Clearing failed state for component Aanderaa_O2 2017-10-16T23:39:51.650Z,1508197191.650 [Aanderaa_O2] No Fault, FailCount= 1 2017-10-16T23:39:53.627Z,1508197193.627 [Aanderaa_O2](DEBUG): Error parsing data: StartupInfo 4831F 14 Mode AADI Smart Sensor Terminal Protocol RS232 Protocol Version 3 Config Version 12 2017-10-16T23:39:53.627Z,1508197193.627 [Aanderaa_O2] Data Fault, FailCount= 2 2017-10-16T23:39:53.628Z,1508197193.628 [Aanderaa_O2](ERROR): Data Fault 2017-10-16T23:39:53.646Z,1508197193.646 [CBIT](ERROR): Data Fault in component: Aanderaa_O2 2017-10-16T23:39:54.140Z,1508197194.140 [Aanderaa_O2](INFO): Powering down 2017-10-16T23:39:54.866Z,1508197194.866 [CBIT](INFO): Clearing failed state for component Aanderaa_O2 2017-10-16T23:39:54.866Z,1508197194.866 [Aanderaa_O2] No Fault, FailCount= 2 2017-10-16T23:39:56.827Z,1508197196.827 [Aanderaa_O2](DEBUG): Error parsing data: StartupInfo 4831F 14 Mode AADI Smart Sensor Terminal Protocol RS232 Protocol Version 3 Config Version 12 2017-10-16T23:39:56.827Z,1508197196.827 [Aanderaa_O2] Data Fault, FailCount= 3 2017-10-16T23:39:56.827Z,1508197196.827 [Aanderaa_O2](ERROR): Data Fault 2017-10-16T23:39:56.847Z,1508197196.847 [CBIT](ERROR): Data Fault in component: Aanderaa_O2 2017-10-16T23:39:56.847Z,1508197196.847 [CBIT](FAULT): Data Fault in component: Aanderaa_O2 2017-10-16T23:39:57.344Z,1508197197.344 [Aanderaa_O2](INFO): Powering down 2017-10-16T23:40:00.045Z,1508197200.045 [Startup:StartupSatComms:A](INFO): Timed out from 2017-10-16T23:38:59.0Z 2017-10-16T23:40:00.045Z,1508197200.045 [Startup:StartupSatComms:A] Stopped 2017-10-16T23:40:00.045Z,1508197200.045 [Startup:StartupSatComms:B] Running Loop=1 2017-10-16T23:40:00.437Z,1508197200.437 [Startup:StartupSatComms:B](DEBUG): Initialize ReadDataComponent to sense platform_communications 2017-10-16T23:40:01.399Z,1508197201.399 [DeadReckonUsingMultipleVelocitySources](ERROR): Will not write estimated position: latitudeAccuracy_ = nan, longitudeAccuracy_ = nan, depthAccuracy_ = nan 2017-10-16T23:40:01.399Z,1508197201.399 [DeadReckonUsingMultipleVelocitySources] Software Fault, FailCount= 1 2017-10-16T23:40:01.399Z,1508197201.399 [DeadReckonUsingMultipleVelocitySources](ERROR): Software Fault 2017-10-16T23:40:01.401Z,1508197201.401 [DeadReckonUsingSpeedCalculator](ERROR): Will not write estimated position: latitudeAccuracy_ = nan, longitudeAccuracy_ = nan, depthAccuracy_ = nan 2017-10-16T23:40:01.401Z,1508197201.401 [DeadReckonUsingSpeedCalculator] Software Fault, FailCount= 1 2017-10-16T23:40:01.401Z,1508197201.401 [DeadReckonUsingSpeedCalculator](ERROR): Software Fault 2017-10-16T23:40:01.412Z,1508197201.412 [CBIT](ERROR): Software Fault in component: DeadReckonUsingMultipleVelocitySources 2017-10-16T23:40:01.412Z,1508197201.412 [CBIT](ERROR): Software Fault in component: DeadReckonUsingSpeedCalculator 2017-10-16T23:40:04.707Z,1508197204.707 [CBIT](INFO): Clearing failed state for component DeadReckonUsingMultipleVelocitySources 2017-10-16T23:40:04.708Z,1508197204.708 [DeadReckonUsingMultipleVelocitySources] No Fault, FailCount= 1 2017-10-16T23:40:04.708Z,1508197204.708 [CBIT](INFO): Clearing failed state for component DeadReckonUsingSpeedCalculator 2017-10-16T23:40:04.708Z,1508197204.708 [DeadReckonUsingSpeedCalculator] No Fault, FailCount= 1 2017-10-16T23:40:04.717Z,1508197204.717 [DataOverHttps](INFO): Sending 25 bytes from file Logs/20171016T230708/Courier0004.lzma 2017-10-16T23:40:04.817Z,1508197204.817 [DeadReckonUsingMultipleVelocitySources](DEBUG): Initializing DeadReckonUsingMultipleVelocitySources component. 2017-10-16T23:40:04.818Z,1508197204.818 [DeadReckonUsingMultipleVelocitySources](INFO): Will consider orientation measurement stale after 120s. 2017-10-16T23:40:04.818Z,1508197204.818 [DeadReckonUsingMultipleVelocitySources](INFO): Will consider velocity measurement stale after 20s. 2017-10-16T23:40:04.818Z,1508197204.818 [DeadReckonUsingSpeedCalculator](DEBUG): Initializing DeadReckonUsingSpeedCalculator component. 2017-10-16T23:40:04.819Z,1508197204.819 [DeadReckonUsingSpeedCalculator](INFO): Will consider orientation measurement stale after 120s. 2017-10-16T23:40:04.819Z,1508197204.819 [DeadReckonUsingSpeedCalculator](INFO): Will consider velocity measurement stale after 20s. 2017-10-16T23:40:05.524Z,1508197205.524 [DataOverHttps](INFO): Moved sent file to Logs/20171016T230708/Courier0004.lzma.bak 2017-10-16T23:40:05.524Z,1508197205.524 [DataOverHttps](INFO): SBD MOMSN=5128533 2017-10-16T23:40:14.529Z,1508197214.529 [DataOverHttps](INFO): Sending 318 bytes from file Logs/20171016T232829/Courier0000.lzma 2017-10-16T23:40:15.338Z,1508197215.338 [DataOverHttps](INFO): Moved sent file to Logs/20171016T232829/Courier0000.lzma.bak 2017-10-16T23:40:15.339Z,1508197215.339 [DataOverHttps](INFO): SBD MOMSN=5128535 2017-10-16T23:40:24.245Z,1508197224.245 [DataOverHttps](INFO): Sending 386 bytes from file Logs/20171016T232829/Courier0004.lzma 2017-10-16T23:40:25.053Z,1508197225.053 [DataOverHttps](INFO): Moved sent file to Logs/20171016T232829/Courier0004.lzma.bak 2017-10-16T23:40:25.054Z,1508197225.054 [DataOverHttps](INFO): SBD MOMSN=5128550 2017-10-16T23:40:34.627Z,1508197234.627 [DataOverHttps](INFO): Sending 72 bytes from file Logs/20171016T233653/Courier0000.lzma 2017-10-16T23:40:35.424Z,1508197235.424 [DataOverHttps](INFO): Moved sent file to Logs/20171016T233653/Courier0000.lzma.bak 2017-10-16T23:40:35.424Z,1508197235.424 [DataOverHttps](INFO): SBD MOMSN=5128566 2017-10-16T23:40:41.900Z,1508197241.900 [CommandLine](IMPORTANT): got command show stack 2017-10-16T23:40:41.900Z,1508197241.900 [CommandLine](IMPORTANT): Behavior Stack: 2017-10-16T23:40:41.901Z,1508197241.901 [Startup](IMPORTANT): Priority 0: Startup:A.GoToSurface 2017-10-16T23:40:41.901Z,1508197241.901 [Startup:StartupSatComms](IMPORTANT): Priority 1: Startup:StartupSatComms:B 2017-10-16T23:40:44.520Z,1508197244.520 [DataOverHttps](INFO): Sending 891 bytes from file Logs/20171016T230708/Express0005.lzma 2017-10-16T23:40:45.332Z,1508197245.332 [DataOverHttps](INFO): Moved sent file to Logs/20171016T230708/Express0005.lzma.bak 2017-10-16T23:40:45.332Z,1508197245.332 [DataOverHttps](INFO): SBD MOMSN=5128570 2017-10-16T23:40:54.337Z,1508197254.337 [DataOverHttps](INFO): Sending 600 bytes from file Logs/20171016T232829/Express0001.lzma 2017-10-16T23:40:55.148Z,1508197255.148 [DataOverHttps](INFO): Moved sent file to Logs/20171016T232829/Express0001.lzma.bak 2017-10-16T23:40:55.149Z,1508197255.149 [DataOverHttps](INFO): SBD MOMSN=5128612 2017-10-16T23:41:00.059Z,1508197260.059 [Startup:StartupSatComms:B](INFO): Timed out from 2017-10-16T23:40:00.0Z 2017-10-16T23:41:00.059Z,1508197260.059 [Startup:StartupSatComms:B] Stopped 2017-10-16T23:41:00.059Z,1508197260.059 [Startup:StartupSatComms](INFO): Completed Startup:StartupSatComms 2017-10-16T23:41:00.059Z,1508197260.059 [Startup:StartupSatComms] Stopped 2017-10-16T23:41:00.059Z,1508197260.059 [Startup:StartupSatComms](DEBUG): Aggregate::uninitialize Startup:StartupSatComms 2017-10-16T23:41:00.061Z,1508197260.061 [Startup](INFO): Completed Startup 2017-10-16T23:41:00.061Z,1508197260.061 [MissionManager](INFO): Startup is completed. 2017-10-16T23:41:00.061Z,1508197260.061 [MissionManager](INFO): Uninitializing Mission Startup 2017-10-16T23:41:00.061Z,1508197260.061 [Startup] Stopped 2017-10-16T23:41:00.061Z,1508197260.061 [Startup](DEBUG): Aggregate::uninitialize Startup 2017-10-16T23:41:00.061Z,1508197260.061 [Startup:A.GoToSurface] Stopped 2017-10-16T23:41:00.061Z,1508197260.061 [Startup:A.GoToSurface](DEBUG): Uninitialize GoToSurfaceComponent. 2017-10-16T23:41:00.442Z,1508197260.442 [MissionManager](IMPORTANT): Started mission Default 2017-10-16T23:41:00.442Z,1508197260.442 [Default] Running Loop=1 2017-10-16T23:41:00.443Z,1508197260.443 [Default](DEBUG): Aggregate::initialize Default 2017-10-16T23:41:00.443Z,1508197260.443 [Default:B.GoToSurface] Running Loop=1 2017-10-16T23:41:00.443Z,1508197260.443 [Default:B.GoToSurface](DEBUG): Initialize GoToSurfaceComponent. 2017-10-16T23:41:00.443Z,1508197260.443 [Default:B.GoToSurface](DEBUG): No depth rate setting specified. Using default value of nan m/s. 2017-10-16T23:41:00.460Z,1508197260.460 [Default:B.GoToSurface](DEBUG): No pitch setting specified. Using default value of nan degrees. 2017-10-16T23:41:00.460Z,1508197260.460 [Default:B.GoToSurface](DEBUG): No speed setting specified. Using default value of 1.000000 m/s. 2017-10-16T23:41:00.461Z,1508197260.461 [Default:B.GoToSurface](DEBUG): No pitch timeout specified. Using default value of 20.000000 seconds. 2017-10-16T23:41:00.461Z,1508197260.461 [Default:B.GoToSurface](DEBUG): No surface timeout specified. Using default value of 1000.000000 seconds. 2017-10-16T23:41:00.461Z,1508197260.461 [Default:A.Wait] Running Loop=1 2017-10-16T23:41:00.461Z,1508197260.461 [Default:A.Wait](DEBUG): Initialize Wait Component. 2017-10-16T23:41:04.082Z,1508197264.082 [DataOverHttps](INFO): Sending 257 bytes from file Logs/20171016T232829/Express0005.lzma 2017-10-16T23:41:04.861Z,1508197264.861 [DataOverHttps](INFO): Moved sent file to Logs/20171016T232829/Express0005.lzma.bak 2017-10-16T23:41:04.861Z,1508197264.861 [DataOverHttps](INFO): SBD MOMSN=5128630 2017-10-16T23:41:06.043Z,1508197266.043 [Rowe_600LCM](FAULT): Did not receive valid device response within the specified allowable sample time. 2017-10-16T23:41:06.043Z,1508197266.043 [Rowe_600LCM] Communications Fault, FailCount= 2 2017-10-16T23:41:06.043Z,1508197266.043 [Rowe_600LCM](ERROR): Communications Fault 2017-10-16T23:41:06.111Z,1508197266.111 [DeadReckonUsingMultipleVelocitySources](DEBUG): Bottom track data is 0.4 s old, using for 20.0 s. 2017-10-16T23:41:06.125Z,1508197266.125 [CBIT](ERROR): Communications Fault in component: Rowe_600LCM 2017-10-16T23:41:06.453Z,1508197266.453 [Rowe_600LCM](INFO): Stopping potential previous instance(s) of roweadcp LCM interface 2017-10-16T23:41:06.550Z,1508197266.550 [DeadReckonUsingMultipleVelocitySources](DEBUG): Bottom track data is 0.9 s old, using for 20.0 s. 2017-10-16T23:41:06.654Z,1508197266.654 [Rowe_600LCM](INFO): Powering down 2017-10-16T23:41:06.960Z,1508197266.960 [DeadReckonUsingMultipleVelocitySources](DEBUG): Bottom track data is 1.3 s old, using for 20.0 s. 2017-10-16T23:41:07.290Z,1508197267.290 [DeadReckonUsingMultipleVelocitySources](DEBUG): Bottom track data is 1.6 s old, using for 20.0 s. 2017-10-16T23:41:07.689Z,1508197267.689 [DeadReckonUsingMultipleVelocitySources](DEBUG): Bottom track data is 2.0 s old, using for 20.0 s. 2017-10-16T23:41:08.094Z,1508197268.094 [DeadReckonUsingMultipleVelocitySources](DEBUG): Bottom track data is 2.4 s old, using for 20.0 s. 2017-10-16T23:41:08.106Z,1508197268.106 [CBIT](INFO): Clearing failed state for component Rowe_600LCM 2017-10-16T23:41:08.107Z,1508197268.107 [Rowe_600LCM] No Fault, FailCount= 2 2017-10-16T23:41:08.269Z,1508197268.269 [Rowe_600LCM](INFO): Initializing 2017-10-16T23:41:08.269Z,1508197268.269 [Rowe_600LCM](INFO): Checking LCM 2017-10-16T23:41:08.270Z,1508197268.270 [Rowe_600LCM](INFO): LCM OK 2017-10-16T23:41:08.270Z,1508197268.270 [Rowe_600LCM](INFO): Powering up 2017-10-16T23:41:08.504Z,1508197268.504 [DeadReckonUsingMultipleVelocitySources](DEBUG): Bottom track data is 2.8 s old, using for 20.0 s. 2017-10-16T23:41:08.896Z,1508197268.896 [DeadReckonUsingMultipleVelocitySources](DEBUG): Bottom track data is 3.2 s old, using for 20.0 s. 2017-10-16T23:41:09.299Z,1508197269.299 [DeadReckonUsingMultipleVelocitySources](DEBUG): Bottom track data is 3.6 s old, using for 20.0 s. 2017-10-16T23:41:09.700Z,1508197269.700 [DeadReckonUsingMultipleVelocitySources](DEBUG): Bottom track data is 4.0 s old, using for 20.0 s. 2017-10-16T23:41:10.092Z,1508197270.092 [DeadReckonUsingMultipleVelocitySources](DEBUG): Bottom track data is 4.4 s old, using for 20.0 s. 2017-10-16T23:41:10.499Z,1508197270.499 [DeadReckonUsingMultipleVelocitySources](DEBUG): Bottom track data is 4.8 s old, using for 20.0 s. 2017-10-16T23:41:10.900Z,1508197270.900 [DeadReckonUsingMultipleVelocitySources](DEBUG): Bottom track data is 5.2 s old, using for 20.0 s. 2017-10-16T23:41:11.299Z,1508197271.299 [DeadReckonUsingMultipleVelocitySources](DEBUG): Bottom track data is 5.6 s old, using for 20.0 s. 2017-10-16T23:41:11.657Z,1508197271.657 [CommandLine](IMPORTANT): got command run ./Missions/Insert/Science.xml 2017-10-16T23:41:11.658Z,1508197271.658 [MissionManager](INFO): Loading Mission: ./Missions/Insert/Science.xml 2017-10-16T23:41:11.757Z,1508197271.757 [DeadReckonUsingMultipleVelocitySources](DEBUG): Bottom track data is 6.1 s old, using for 20.0 s. 2017-10-16T23:41:11.845Z,1508197271.845 [MissionManager](INFO): DefineArg Science.SampleISUS = 0 bool 2017-10-16T23:41:11.848Z,1508197271.848 [MissionManager](INFO): DefineArg Science.SampleISUSmaxPitch = 60.000000 arcdeg 2017-10-16T23:41:11.851Z,1508197271.851 [MissionManager](INFO): DefineArg Science.SampleISUSminPitch = -60.000000 arcdeg 2017-10-16T23:41:11.854Z,1508197271.854 [MissionManager](INFO): DefineArg Science.PeakDetectChlActive = 0 bool 2017-10-16T23:41:11.856Z,1508197271.856 [MissionManager](INFO): DefineArg Science.HighestChlPeakReportActive = 0 bool 2017-10-16T23:41:11.859Z,1508197271.859 [MissionManager](INFO): DefineArg Science.PatchTracking = 0 bool 2017-10-16T23:41:11.863Z,1508197271.863 [MissionManager](INFO): DefineArg Science.FilterWidthHorizontal = 3.000000 count 2017-10-16T23:41:11.866Z,1508197271.866 [MissionManager](INFO): DefineArg Science.NumProfilesSlidingwindow = 100.000000 count 2017-10-16T23:41:11.869Z,1508197271.869 [MissionManager](INFO): DefineArg Science.PeakDetectNO3Active = 0 bool 2017-10-16T23:41:11.872Z,1508197271.872 [MissionManager](INFO): DefineArg Science.UpwardDerivativeOfTemperatureActive = 0 bool 2017-10-16T23:41:11.875Z,1508197271.875 [MissionManager](INFO): DefineArg Science.EnabledAanderaaO2 = 1.000000 bool 2017-10-16T23:41:11.879Z,1508197271.879 [MissionManager](INFO): DefineArg Science.EnabledNeilBrown = 1.000000 bool 2017-10-16T23:41:11.914Z,1508197271.914 [MissionManager](INFO): DefineArg Science.EnabledSeabird = 0.000000 bool 2017-10-16T23:41:11.922Z,1508197271.922 [MissionManager](INFO): DefineArg Science.EnabledTurbulence_NPS = 0.000000 bool 2017-10-16T23:41:11.929Z,1508197271.929 [MissionManager](INFO): DefineArg Science.EnabledWetLabsBB2FL = 1.000000 bool 2017-10-16T23:41:12.036Z,1508197272.036 [MissionManager](INFO): DefineArg Science.EnabledISUS = 0.000000 bool 2017-10-16T23:41:12.039Z,1508197272.039 [MissionManager](INFO): DefineArg Science.LowPassWindowLength = 20.000000 count 2017-10-16T23:41:12.042Z,1508197272.042 [MissionManager](INFO): DefineArg Science.PeakChlShallowBound = nan m 2017-10-16T23:41:12.054Z,1508197272.054 [MissionManager](INFO): DefineArg Science.PeakChlDeepBound = nan m 2017-10-16T23:41:12.082Z,1508197272.082 [MissionManager](INFO): DefineOutput Science.PeakChl = 0.000000 ug/l 2017-10-16T23:41:12.101Z,1508197272.101 [MissionManager](INFO): DefineOutput Science.PeakChlDepth = 0.000000 m 2017-10-16T23:41:12.108Z,1508197272.108 [MissionManager](INFO): DefineOutput Science.PeakChlLatitude = nan arcdeg 2017-10-16T23:41:12.111Z,1508197272.111 [MissionManager](INFO): DefineOutput Science.PeakChlLongitude = nan arcdeg 2017-10-16T23:41:12.122Z,1508197272.122 [DeadReckonUsingMultipleVelocitySources](DEBUG): Bottom track data is 6.4 s old, using for 20.0 s. 2017-10-16T23:41:12.126Z,1508197272.126 [MissionManager](INFO): DefineOutput Science.PeakNO3 = 0.000000 umol/l 2017-10-16T23:41:12.145Z,1508197272.145 [MissionManager](INFO): DefineOutput Science.PeakNO3Depth = 0.000000 m 2017-10-16T23:41:12.160Z,1508197272.160 [MissionManager](INFO): DefineOutput Science.PeakNO3Latitude = nan arcdeg 2017-10-16T23:41:12.167Z,1508197272.167 [MissionManager](INFO): DefineOutput Science.PeakNO3Longitude = nan arcdeg 2017-10-16T23:41:12.170Z,1508197272.170 [MissionManager](INFO): DefineOutput Science.PatchChl = 0.000000 m 2017-10-16T23:41:12.177Z,1508197272.177 [MissionManager](INFO): DefineOutput Science.PatchChlDepth = 0.000000 m 2017-10-16T23:41:12.200Z,1508197272.200 [MissionManager](INFO): DefineOutput Science.PatchChlLatitude = nan arcdeg 2017-10-16T23:41:12.208Z,1508197272.208 [MissionManager](INFO): DefineOutput Science.PatchChlLongitude = nan arcdeg 2017-10-16T23:41:12.214Z,1508197272.214 [MissionManager](INFO): DefineOutput Science.PatchChlDistance = nan arcdeg 2017-10-16T23:41:12.246Z,1508197272.246 [Science:PeakDetectChl:A.PeakDetectVsDepth](DEBUG): Construct PeakDetectVsDepth. 2017-10-16T23:41:12.262Z,1508197272.262 [Science:HighestChlPeakReport:A.PeakDetectHorizontal](DEBUG): Construct PeakDetectHorizontal. 2017-10-16T23:41:12.356Z,1508197272.356 [Science:PeakDetectNO3:A.PeakDetectVsDepth](DEBUG): Construct PeakDetectVsDepth. 2017-10-16T23:41:12.431Z,1508197272.431 [MissionManager](DEBUG): Set either this or PeakDetectNO3Active to True in order to sample Nitrate. EnabledISUS must also be true. Maximum pitch to sample ISUS. (EnabledISUS must also be true.) 60.0 Minimum pitch to sample ISUS. (EnabledISUS must also be true.) -60.0 Turns on peak detection of Cholorphyll. Turns on reporting of the highest peak value on yo-yo profiles in a horizontal sliding window (of length numProfilesSlidingwindow) If tracking a patch Width of boxcar filter applied to yoyo-wise chl peaks to pick out the highest peak. 3 Length of horizontal sliding window. The highest yoyo-wise chl peak (after low-pass filtering by a filter of length FilterWidthHorizontal) within this window. 100 Turns on peak detection of Nitrate (and turns on ISUS). Turns on seawater temperature derivative. Automatically set to True if the Aanderaa O2 sensor is installed. Set to false to disable reading Aandera O2. Automatically set to true if the Neil Brown CTD is enabled. Set to false to disable reading from the Neil Brown. Automatically set to true if the CTD is enabled. Set to false to disable reading from the CTD. Automatically set to true if the NPS Turbulence sensor is enabled. Set to false to disable reading from the NPS Turbulence sensor. Automatically set to true if the the WetLabs BB2FL is enabled. Set to false to disable the WetLabs BB2FL. Automatically set to True if ISUS is enabled. Set to false to disable ISUS. Low-pass window length (based on depth sensor sampling interval 0.4 second) for low-pass filtering. 20 Shallow depth bound for detecting chl peak on each descent or ascent profile. NaN Deep depth bound for detecting chl peak on each descent or ascent profile. NaN 0 0 NaN NaN 0 0 NaN NaN 0 0 NaN NaN NaN 2017-10-16T23:41:12.496Z,1508197272.496 [DeadReckonUsingMultipleVelocitySources](DEBUG): Bottom track data is 6.8 s old, using for 20.0 s. 2017-10-16T23:41:12.499Z,1508197272.499 [Default] Stopped 2017-10-16T23:41:12.504Z,1508197272.504 [Default](DEBUG): Aggregate::uninitialize Default 2017-10-16T23:41:12.504Z,1508197272.504 [Default:A.Wait] Stopped 2017-10-16T23:41:12.504Z,1508197272.504 [Default:A.Wait](DEBUG): Uninitialize Wait Component. 2017-10-16T23:41:12.504Z,1508197272.504 [Default:B.GoToSurface] Stopped 2017-10-16T23:41:12.504Z,1508197272.504 [Default:B.GoToSurface](DEBUG): Uninitialize GoToSurfaceComponent. 2017-10-16T23:41:12.504Z,1508197272.504 [MissionManager](IMPORTANT): Started mission Science 2017-10-16T23:41:12.505Z,1508197272.505 [Science] Running Loop=1 2017-10-16T23:41:12.505Z,1508197272.505 [Science](DEBUG): Aggregate::initialize Science 2017-10-16T23:41:12.505Z,1508197272.505 [Science:A] Running Loop=1 2017-10-16T23:41:12.505Z,1508197272.505 [Science:B] Running Loop=1 2017-10-16T23:41:12.505Z,1508197272.505 [Science:C] Running Loop=1 2017-10-16T23:41:12.505Z,1508197272.505 [Science:D] Running Loop=1 2017-10-16T23:41:12.505Z,1508197272.505 [Science:E] Running Loop=1 2017-10-16T23:41:12.505Z,1508197272.505 [Science:F] Running Loop=1 2017-10-16T23:41:12.505Z,1508197272.505 [Science:PeakDetectChl] Running Loop=1 2017-10-16T23:41:12.505Z,1508197272.505 [Science:PeakDetectChl](DEBUG): Aggregate::initialize Science:PeakDetectChl 2017-10-16T23:41:12.506Z,1508197272.506 [Science:PeakDetectChl:A.PeakDetectVsDepth] Running Loop=1 2017-10-16T23:41:12.506Z,1508197272.506 [Science:PeakDetectChl:A.PeakDetectVsDepth](DEBUG): Initialize. 2017-10-16T23:41:12.512Z,1508197272.512 [Science:HighestChlPeakReport] Running Loop=1 2017-10-16T23:41:12.513Z,1508197272.513 [Science:HighestChlPeakReport](DEBUG): Aggregate::initialize Science:HighestChlPeakReport 2017-10-16T23:41:12.513Z,1508197272.513 [Science:HighestChlPeakReport:A.PeakDetectHorizontal] Running Loop=1 2017-10-16T23:41:12.513Z,1508197272.513 [Science:HighestChlPeakReport:A.PeakDetectHorizontal](INFO): Initialize. 2017-10-16T23:41:12.513Z,1508197272.513 [Science:PeakDetectNO3] Running Loop=1 2017-10-16T23:41:12.514Z,1508197272.514 [Science:PeakDetectNO3](DEBUG): Aggregate::initialize Science:PeakDetectNO3 2017-10-16T23:41:12.514Z,1508197272.514 [Science:PeakDetectNO3:A.PeakDetectVsDepth] Running Loop=1 2017-10-16T23:41:12.514Z,1508197272.514 [Science:PeakDetectNO3:A.PeakDetectVsDepth](DEBUG): Initialize. 2017-10-16T23:41:12.520Z,1508197272.520 [Science:PeakDetectNO3] Stopped 2017-10-16T23:41:12.521Z,1508197272.521 [Science:PeakDetectNO3](DEBUG): Aggregate::uninitialize Science:PeakDetectNO3 2017-10-16T23:41:12.521Z,1508197272.521 [Science:PeakDetectNO3:A.PeakDetectVsDepth] Stopped 2017-10-16T23:41:12.521Z,1508197272.521 [Science:PeakDetectNO3:A.PeakDetectVsDepth](DEBUG): Uninitialize. 2017-10-16T23:41:12.521Z,1508197272.521 [Science:HighestChlPeakReport] Stopped 2017-10-16T23:41:12.521Z,1508197272.521 [Science:HighestChlPeakReport](DEBUG): Aggregate::uninitialize Science:HighestChlPeakReport 2017-10-16T23:41:12.521Z,1508197272.521 [Science:HighestChlPeakReport:A.PeakDetectHorizontal] Stopped 2017-10-16T23:41:12.521Z,1508197272.521 [Science:HighestChlPeakReport:A.PeakDetectHorizontal](DEBUG): Uninitialize. 2017-10-16T23:41:12.521Z,1508197272.521 [Science:PeakDetectChl] Stopped 2017-10-16T23:41:12.521Z,1508197272.521 [Science:PeakDetectChl](DEBUG): Aggregate::uninitialize Science:PeakDetectChl 2017-10-16T23:41:12.521Z,1508197272.521 [Science:PeakDetectChl:A.PeakDetectVsDepth] Stopped 2017-10-16T23:41:12.521Z,1508197272.521 [Science:PeakDetectChl:A.PeakDetectVsDepth](DEBUG): Uninitialize. 2017-10-16T23:41:12.521Z,1508197272.521 [Science:F] Running Loop=1 2017-10-16T23:41:12.522Z,1508197272.522 [Science:F](DEBUG): Initialize ReadDataComponent to sense mass_concentration_of_chlorophyll_in_sea_water 2017-10-16T23:41:12.528Z,1508197272.528 [Science:E] Stopped 2017-10-16T23:41:12.528Z,1508197272.528 [Science:D] Stopped 2017-10-16T23:41:12.528Z,1508197272.528 [Science:C] Running Loop=1 2017-10-16T23:41:12.529Z,1508197272.529 [Science:C](DEBUG): Initialize ReadDataComponent to sense sea_water_temperature 2017-10-16T23:41:12.529Z,1508197272.529 [Science:C](DEBUG): Initialize ReadDataComponent to sense sea_water_salinity 2017-10-16T23:41:12.531Z,1508197272.531 [Science:B] Stopped 2017-10-16T23:41:12.531Z,1508197272.531 [Science:A] Running Loop=1 2017-10-16T23:41:12.536Z,1508197272.536 [Science:A](DEBUG): Initialize ReadDataComponent to sense mass_concentration_of_oxygen_in_sea_water 2017-10-16T23:41:12.541Z,1508197272.541 [Rowe_600LCM](INFO): Stopping potential previous instance(s) of Rowe LCM interface 2017-10-16T23:41:12.673Z,1508197272.673 [CommandLine](IMPORTANT): Running ./Missions/Insert/Science.xml 2017-10-16T23:41:12.714Z,1508197272.714 [Rowe_600LCM](INFO): Started Rowe LCM interface with command:nohup ./lrauv-framework/onboard/bin/roweadcp -ldir /mnt/mmc/LRAUV/Logs/latest/ -dev /dev/ttyB4 -b 38400 >& /dev/null & 2017-10-16T23:41:12.715Z,1508197272.715 [Rowe_600LCM](INFO): LCM subscribed to channel:Rowe_600LCM.adcp_dvl.bottom_track 2017-10-16T23:41:12.716Z,1508197272.716 [Rowe_600LCM](INFO): LCM subscribed to channel:Rowe_600LCM.adcp_dvl.vehicle_water_velocity 2017-10-16T23:41:12.717Z,1508197272.717 [Rowe_600LCM](INFO): LCM subscribed to channel:rowe_dvl.rowe 2017-10-16T23:41:12.764Z,1508197272.764 [WetLabsBB2FL](INFO): Opening uart, block timeout 10ths=4 2017-10-16T23:41:12.764Z,1508197272.764 [WetLabsBB2FL](INFO): Powering up 2017-10-16T23:41:12.804Z,1508197272.804 [CTD_NeilBrown](DEBUG): Initializing CTD_NeilBrown. 2017-10-16T23:41:12.812Z,1508197272.812 [CTD_NeilBrown](INFO): Opening uart, block timeout 10ths=4 2017-10-16T23:41:12.937Z,1508197272.937 [DeadReckonUsingMultipleVelocitySources](DEBUG): Bottom track data is 7.2 s old, using for 20.0 s. 2017-10-16T23:41:14.531Z,1508197274.531 [Reporter](INFO): WetLabsBB2FL.durationOfLastRun 0.162977 s 2017-10-16T23:41:14.532Z,1508197274.532 [Reporter](INFO): WetLabsBB2FL.mass_concentration_of_chlorophyll_in_sea_water nan ug/l 2017-10-16T23:41:14.906Z,1508197274.906 [Reporter](INFO): WetLabsBB2FL.durationOfLastRun 0.404260 s 2017-10-16T23:41:15.306Z,1508197275.306 [Reporter](INFO): WetLabsBB2FL.durationOfLastRun 0.060612 s 2017-10-16T23:41:15.307Z,1508197275.307 [Reporter](INFO): WetLabsBB2FL.mass_concentration_of_chlorophyll_in_sea_water 0.368900 ug/l 2017-10-16T23:41:15.720Z,1508197275.720 [Reporter](INFO): WetLabsBB2FL.durationOfLastRun 0.406390 s 2017-10-16T23:41:16.111Z,1508197276.111 [Reporter](INFO): WetLabsBB2FL.durationOfLastRun 0.061384 s 2017-10-16T23:41:16.511Z,1508197276.511 [Reporter](INFO): WetLabsBB2FL.durationOfLastRun 0.409485 s 2017-10-16T23:41:16.908Z,1508197276.908 [Reporter](INFO): WetLabsBB2FL.durationOfLastRun 0.048620 s 2017-10-16T23:41:16.909Z,1508197276.909 [Reporter](INFO): WetLabsBB2FL.mass_concentration_of_chlorophyll_in_sea_water 0.416500 ug/l 2017-10-16T23:41:16.967Z,1508197276.967 [CTD_NeilBrown](DEBUG): serial timeout 2017-10-16T23:41:17.304Z,1508197277.304 [Reporter](INFO): WetLabsBB2FL.durationOfLastRun 0.402256 s 2017-10-16T23:41:17.721Z,1508197277.721 [Reporter](INFO): WetLabsBB2FL.durationOfLastRun 0.060969 s 2017-10-16T23:41:17.722Z,1508197277.722 [Reporter](INFO): WetLabsBB2FL.mass_concentration_of_chlorophyll_in_sea_water 0.392700 ug/l 2017-10-16T23:41:18.105Z,1508197278.105 [Reporter](INFO): WetLabsBB2FL.durationOfLastRun 0.410652 s 2017-10-16T23:41:18.508Z,1508197278.508 [Reporter](INFO): WetLabsBB2FL.durationOfLastRun 0.407453 s 2017-10-16T23:41:18.911Z,1508197278.911 [Reporter](INFO): WetLabsBB2FL.durationOfLastRun 0.063159 s 2017-10-16T23:41:18.911Z,1508197278.911 [Reporter](INFO): WetLabsBB2FL.mass_concentration_of_chlorophyll_in_sea_water 0.357000 ug/l 2017-10-16T23:41:19.311Z,1508197279.311 [Reporter](INFO): WetLabsBB2FL.durationOfLastRun 0.402358 s 2017-10-16T23:41:19.706Z,1508197279.706 [Reporter](INFO): WetLabsBB2FL.durationOfLastRun 0.061835 s 2017-10-16T23:41:19.707Z,1508197279.707 [Reporter](INFO): WetLabsBB2FL.mass_concentration_of_chlorophyll_in_sea_water 0.392700 ug/l 2017-10-16T23:41:20.114Z,1508197280.114 [Reporter](INFO): WetLabsBB2FL.durationOfLastRun 0.407596 s 2017-10-16T23:41:20.505Z,1508197280.505 [Reporter](INFO): WetLabsBB2FL.durationOfLastRun 0.060506 s 2017-10-16T23:41:20.506Z,1508197280.506 [Reporter](INFO): WetLabsBB2FL.mass_concentration_of_chlorophyll_in_sea_water 0.416500 ug/l 2017-10-16T23:41:20.911Z,1508197280.911 [Reporter](INFO): WetLabsBB2FL.durationOfLastRun 0.402628 s 2017-10-16T23:41:21.356Z,1508197281.356 [Reporter](INFO): WetLabsBB2FL.durationOfLastRun 0.060488 s 2017-10-16T23:41:21.357Z,1508197281.357 [Reporter](INFO): WetLabsBB2FL.mass_concentration_of_chlorophyll_in_sea_water 0.368900 ug/l 2017-10-16T23:41:21.714Z,1508197281.714 [Reporter](INFO): WetLabsBB2FL.durationOfLastRun 0.402726 s 2017-10-16T23:41:22.111Z,1508197282.111 [Reporter](INFO): WetLabsBB2FL.durationOfLastRun 0.063308 s 2017-10-16T23:41:22.112Z,1508197282.112 [Reporter](INFO): WetLabsBB2FL.mass_concentration_of_chlorophyll_in_sea_water 0.357000 ug/l 2017-10-16T23:41:22.517Z,1508197282.517 [Reporter](INFO): WetLabsBB2FL.durationOfLastRun 0.410716 s 2017-10-16T23:41:22.921Z,1508197282.921 [Reporter](INFO): WetLabsBB2FL.durationOfLastRun 0.048811 s 2017-10-16T23:41:22.922Z,1508197282.922 [Reporter](INFO): WetLabsBB2FL.mass_concentration_of_chlorophyll_in_sea_water 0.404600 ug/l 2017-10-16T23:41:23.712Z,1508197283.712 [Reporter](INFO): WetLabsBB2FL.durationOfLastRun 0.406441 s 2017-10-16T23:41:24.113Z,1508197284.113 [Reporter](INFO): WetLabsBB2FL.durationOfLastRun 0.048604 s 2017-10-16T23:41:24.114Z,1508197284.114 [Reporter](INFO): WetLabsBB2FL.mass_concentration_of_chlorophyll_in_sea_water 0.380800 ug/l 2017-10-16T23:41:24.507Z,1508197284.507 [Reporter](INFO): WetLabsBB2FL.durationOfLastRun 0.406548 s 2017-10-16T23:41:24.910Z,1508197284.910 [Reporter](INFO): WetLabsBB2FL.durationOfLastRun 0.060506 s 2017-10-16T23:41:24.911Z,1508197284.911 [Reporter](INFO): WetLabsBB2FL.mass_concentration_of_chlorophyll_in_sea_water 0.392700 ug/l 2017-10-16T23:41:25.319Z,1508197285.319 [Reporter](INFO): WetLabsBB2FL.durationOfLastRun 0.406825 s 2017-10-16T23:41:25.722Z,1508197285.722 [Reporter](INFO): WetLabsBB2FL.durationOfLastRun 0.060581 s 2017-10-16T23:41:26.121Z,1508197286.121 [Reporter](INFO): WetLabsBB2FL.durationOfLastRun 0.406573 s 2017-10-16T23:41:26.523Z,1508197286.523 [Reporter](INFO): WetLabsBB2FL.durationOfLastRun 0.048694 s 2017-10-16T23:41:26.917Z,1508197286.917 [Reporter](INFO): WetLabsBB2FL.durationOfLastRun 0.406243 s 2017-10-16T23:41:27.329Z,1508197287.329 [Reporter](INFO): WetLabsBB2FL.durationOfLastRun 0.068681 s 2017-10-16T23:41:27.330Z,1508197287.330 [Reporter](INFO): WetLabsBB2FL.mass_concentration_of_chlorophyll_in_sea_water 0.357000 ug/l 2017-10-16T23:41:27.725Z,1508197287.725 [Reporter](INFO): WetLabsBB2FL.durationOfLastRun 0.410668 s 2017-10-16T23:41:27.840Z,1508197287.840 [CTD_NeilBrown](ERROR): serial buffer full 2017-10-16T23:41:27.841Z,1508197287.841 [CTD_NeilBrown] Communications Fault, FailCount= 1 2017-10-16T23:41:27.841Z,1508197287.841 [CTD_NeilBrown](ERROR): Communications Fault 2017-10-16T23:41:27.842Z,1508197287.842 [CTD_NeilBrown](FAULT): No CTD communication! Re-initializing 2017-10-16T23:41:28.132Z,1508197288.132 [CBIT](ERROR): Communications Fault in component: CTD_NeilBrown 2017-10-16T23:41:28.133Z,1508197288.133 [Reporter](INFO): WetLabsBB2FL.durationOfLastRun 0.411728 s 2017-10-16T23:41:28.248Z,1508197288.248 [CTD_NeilBrown](INFO): Powering down 2017-10-16T23:41:28.533Z,1508197288.533 [Reporter](INFO): WetLabsBB2FL.durationOfLastRun 0.053230 s 2017-10-16T23:41:28.534Z,1508197288.534 [Reporter](INFO): WetLabsBB2FL.mass_concentration_of_chlorophyll_in_sea_water 0.404600 ug/l 2017-10-16T23:41:28.905Z,1508197288.905 [Reporter](INFO): WetLabsBB2FL.durationOfLastRun 0.401480 s 2017-10-16T23:41:29.306Z,1508197289.306 [Reporter](INFO): WetLabsBB2FL.durationOfLastRun 0.072444 s 2017-10-16T23:41:29.308Z,1508197289.308 [Reporter](INFO): WetLabsBB2FL.mass_concentration_of_chlorophyll_in_sea_water 0.428400 ug/l 2017-10-16T23:41:29.705Z,1508197289.705 [CBIT](INFO): Clearing failed state for component CTD_NeilBrown 2017-10-16T23:41:29.705Z,1508197289.705 [CTD_NeilBrown] No Fault, FailCount= 1 2017-10-16T23:41:29.707Z,1508197289.707 [Reporter](INFO): WetLabsBB2FL.durationOfLastRun 0.403934 s 2017-10-16T23:41:29.865Z,1508197289.865 [CTD_NeilBrown](DEBUG): Initializing CTD_NeilBrown. 2017-10-16T23:41:29.866Z,1508197289.866 [CTD_NeilBrown](INFO): Opening uart, block timeout 10ths=4 2017-10-16T23:41:30.127Z,1508197290.127 [Reporter](INFO): WetLabsBB2FL.durationOfLastRun 0.060045 s 2017-10-16T23:41:30.128Z,1508197290.128 [Reporter](INFO): WetLabsBB2FL.mass_concentration_of_chlorophyll_in_sea_water 0.392700 ug/l 2017-10-16T23:41:30.503Z,1508197290.503 [Reporter](INFO): WetLabsBB2FL.durationOfLastRun 0.402442 s 2017-10-16T23:41:30.908Z,1508197290.908 [Reporter](INFO): WetLabsBB2FL.durationOfLastRun 0.060638 s 2017-10-16T23:41:30.909Z,1508197290.909 [Reporter](INFO): WetLabsBB2FL.mass_concentration_of_chlorophyll_in_sea_water 0.368900 ug/l 2017-10-16T23:41:31.325Z,1508197291.325 [Reporter](INFO): WetLabsBB2FL.durationOfLastRun 0.406634 s 2017-10-16T23:41:31.726Z,1508197291.726 [Reporter](INFO): WetLabsBB2FL.durationOfLastRun 0.056806 s 2017-10-16T23:41:31.736Z,1508197291.736 [Reporter](INFO): WetLabsBB2FL.mass_concentration_of_chlorophyll_in_sea_water 0.404600 ug/l 2017-10-16T23:41:32.114Z,1508197292.114 [Reporter](INFO): WetLabsBB2FL.durationOfLastRun 0.401919 s 2017-10-16T23:41:32.505Z,1508197292.505 [Reporter](INFO): WetLabsBB2FL.durationOfLastRun 0.404033 s 2017-10-16T23:41:32.903Z,1508197292.903 [CTD_NeilBrown](DEBUG): serial timeout 2017-10-16T23:41:32.909Z,1508197292.909 [Reporter](INFO): WetLabsBB2FL.durationOfLastRun 0.076316 s 2017-10-16T23:41:32.910Z,1508197292.910 [Reporter](INFO): WetLabsBB2FL.mass_concentration_of_chlorophyll_in_sea_water 0.380800 ug/l 2017-10-16T23:41:33.310Z,1508197293.310 [Reporter](INFO): WetLabsBB2FL.durationOfLastRun 0.410609 s 2017-10-16T23:41:33.711Z,1508197293.711 [Reporter](INFO): WetLabsBB2FL.durationOfLastRun 0.048695 s 2017-10-16T23:41:33.712Z,1508197293.712 [Reporter](INFO): WetLabsBB2FL.mass_concentration_of_chlorophyll_in_sea_water 0.357000 ug/l 2017-10-16T23:41:34.132Z,1508197294.132 [Reporter](INFO): WetLabsBB2FL.durationOfLastRun 0.406645 s 2017-10-16T23:41:34.508Z,1508197294.508 [Reporter](INFO): WetLabsBB2FL.durationOfLastRun 0.072193 s 2017-10-16T23:41:34.509Z,1508197294.509 [Reporter](INFO): WetLabsBB2FL.mass_concentration_of_chlorophyll_in_sea_water 0.380800 ug/l 2017-10-16T23:41:34.916Z,1508197294.916 [Reporter](INFO): WetLabsBB2FL.durationOfLastRun 0.406559 s 2017-10-16T23:41:35.308Z,1508197295.308 [Reporter](INFO): WetLabsBB2FL.durationOfLastRun 0.060511 s 2017-10-16T23:41:35.309Z,1508197295.309 [Reporter](INFO): WetLabsBB2FL.mass_concentration_of_chlorophyll_in_sea_water 0.404600 ug/l 2017-10-16T23:41:35.713Z,1508197295.713 [Reporter](INFO): WetLabsBB2FL.durationOfLastRun 0.402671 s 2017-10-16T23:41:36.131Z,1508197296.131 [Reporter](INFO): WetLabsBB2FL.durationOfLastRun 0.065551 s 2017-10-16T23:41:36.136Z,1508197296.136 [Reporter](INFO): WetLabsBB2FL.mass_concentration_of_chlorophyll_in_sea_water 0.416500 ug/l 2017-10-16T23:41:36.534Z,1508197296.534 [Reporter](INFO): WetLabsBB2FL.durationOfLastRun 0.405581 s 2017-10-16T23:41:36.926Z,1508197296.926 [Reporter](INFO): WetLabsBB2FL.durationOfLastRun 0.419437 s 2017-10-16T23:41:37.060Z,1508197297.060 [CommandLine](IMPORTANT): got command stop 2017-10-16T23:41:37.060Z,1508197297.060 [CommandLine](IMPORTANT): Scheduling is paused 2017-10-16T23:41:37.060Z,1508197297.060 [Supervisor](INFO): Stop Mission called by CommandLine::commandStop 2017-10-16T23:41:37.310Z,1508197297.310 [MissionManager](INFO): MissionManager is completed. 2017-10-16T23:41:37.310Z,1508197297.310 [MissionManager](INFO): Uninitializing Mission Science 2017-10-16T23:41:37.310Z,1508197297.310 [Science] Stopped 2017-10-16T23:41:37.310Z,1508197297.310 [Science](DEBUG): Aggregate::uninitialize Science 2017-10-16T23:41:37.310Z,1508197297.310 [Science:A] Stopped 2017-10-16T23:41:37.310Z,1508197297.310 [Science:C] Stopped 2017-10-16T23:41:37.310Z,1508197297.310 [Science:F] Stopped 2017-10-16T23:41:37.332Z,1508197297.332 [Reporter](INFO): WetLabsBB2FL.durationOfLastRun 0.052853 s 2017-10-16T23:41:37.333Z,1508197297.333 [Reporter](INFO): WetLabsBB2FL.mass_concentration_of_chlorophyll_in_sea_water 0.380800 ug/l 2017-10-16T23:41:37.456Z,1508197297.456 [WetLabsBB2FL](INFO): Powering down 2017-10-16T23:41:37.711Z,1508197297.711 [MissionManager](IMPORTANT): Started mission Default 2017-10-16T23:41:37.711Z,1508197297.711 [Default] Running Loop=1 2017-10-16T23:41:37.711Z,1508197297.711 [Default](DEBUG): Aggregate::initialize Default 2017-10-16T23:41:37.711Z,1508197297.711 [Default:B.GoToSurface] Running Loop=1 2017-10-16T23:41:37.711Z,1508197297.711 [Default:B.GoToSurface](DEBUG): Initialize GoToSurfaceComponent. 2017-10-16T23:41:37.712Z,1508197297.712 [Default:B.GoToSurface](DEBUG): No depth rate setting specified. Using default value of nan m/s. 2017-10-16T23:41:37.712Z,1508197297.712 [Default:B.GoToSurface](DEBUG): No pitch setting specified. Using default value of nan degrees. 2017-10-16T23:41:37.712Z,1508197297.712 [Default:B.GoToSurface](DEBUG): No speed setting specified. Using default value of 1.000000 m/s. 2017-10-16T23:41:37.713Z,1508197297.713 [Default:B.GoToSurface](DEBUG): No pitch timeout specified. Using default value of 20.000000 seconds. 2017-10-16T23:41:37.713Z,1508197297.713 [Default:B.GoToSurface](DEBUG): No surface timeout specified. Using default value of 1000.000000 seconds. 2017-10-16T23:41:37.713Z,1508197297.713 [Default:A.Wait] Running Loop=1 2017-10-16T23:41:37.713Z,1508197297.713 [Default:A.Wait](DEBUG): Initialize Wait Component. 2017-10-16T23:41:37.725Z,1508197297.725 [Reporter](INFO): WetLabsBB2FL.durationOfLastRun 0.410683 s 2017-10-16T23:41:37.726Z,1508197297.726 [Reporter](INFO): WetLabsBB2FL.mass_concentration_of_chlorophyll_in_sea_water nan ug/l 2017-10-16T23:41:38.115Z,1508197298.115 [Reporter](INFO): WetLabsBB2FL.durationOfLastRun no_value 2017-10-16T23:41:38.116Z,1508197298.116 [Reporter](INFO): WetLabsBB2FL.mass_concentration_of_chlorophyll_in_sea_water no_value 2017-10-16T23:41:40.984Z,1508197300.984 [CTD_NeilBrown](DEBUG): serial timeout 2017-10-16T23:41:40.984Z,1508197300.984 [CTD_NeilBrown](FAULT): No CTD communication! Re-initializing 2017-10-16T23:41:40.984Z,1508197300.984 [CTD_NeilBrown] Communications Fault, FailCount= 2 2017-10-16T23:41:40.984Z,1508197300.984 [CTD_NeilBrown](ERROR): Communications Fault 2017-10-16T23:41:41.313Z,1508197301.313 [CBIT](ERROR): Communications Fault in component: CTD_NeilBrown 2017-10-16T23:41:41.388Z,1508197301.388 [CTD_NeilBrown](INFO): Powering down 2017-10-16T23:41:42.140Z,1508197302.140 [CommandLine](IMPORTANT): got command quit 2017-10-16T23:41:42.926Z,1508197302.926 [CBIT](INFO): Clearing failed state for component CTD_NeilBrown 2017-10-16T23:41:42.926Z,1508197302.926 [CTD_NeilBrown] No Fault, FailCount= 2 2017-10-16T23:41:43.004Z,1508197303.004 [CTD_NeilBrown](DEBUG): Initializing CTD_NeilBrown. 2017-10-16T23:41:43.004Z,1508197303.004 [CTD_NeilBrown](INFO): Opening uart, block timeout 10ths=4 2017-10-16T23:41:43.162Z,1508197303.162 [CommandLine ThreadHandler](INFO): Uninitializing protected caller thread. 2017-10-16T23:41:43.163Z,1508197303.163 [CommandLine ThreadHandler](INFO): Thread cancelled. 2017-10-16T23:41:43.227Z,1508197303.227 [Supervisor](DEBUG): Uninitializing supervisor and starting cleanup. Bye! 2017-10-16T23:41:43.227Z,1508197303.227 [CommandLine ThreadHandler](INFO): Thread cancelled. 2017-10-16T23:41:43.228Z,1508197303.228 [CommandLine](INFO): Join timeout helper Thread ID is 3649 2017-10-16T23:41:43.229Z,1508197303.229 [ComponentRegistry](INFO): Shutting down NavChartDb ThreadHandler 2017-10-16T23:41:43.229Z,1508197303.229 [NavChartDb ThreadHandler](INFO): Thread cancelled. 2017-10-16T23:41:43.229Z,1508197303.229 [NavChartDb](INFO): Join timeout helper Thread ID is 3650 2017-10-16T23:41:43.260Z,1508197303.260 [NavChartDb ThreadHandler](INFO): Uninitializing protected caller thread. 2017-10-16T23:41:43.260Z,1508197303.260 [NavChartDb ThreadHandler](INFO): Thread cancelled. 2017-10-16T23:41:43.273Z,1508197303.273 [ComponentRegistry](INFO): Shutting down WetLabsBB2FL ThreadHandler 2017-10-16T23:41:43.273Z,1508197303.273 [WetLabsBB2FL ThreadHandler](INFO): Thread cancelled. 2017-10-16T23:41:43.273Z,1508197303.273 [WetLabsBB2FL](INFO): Join timeout helper Thread ID is 3651 2017-10-16T23:41:43.516Z,1508197303.516 [WetLabsBB2FL ThreadHandler](INFO): Uninitializing protected caller thread. 2017-10-16T23:41:43.516Z,1508197303.516 [WetLabsBB2FL](INFO): Powering down 2017-10-16T23:41:43.517Z,1508197303.517 [WetLabsBB2FL ThreadHandler](INFO): Thread cancelled. 2017-10-16T23:41:43.535Z,1508197303.535 [ComponentRegistry](INFO): Shutting down CTD_NeilBrown ThreadHandler 2017-10-16T23:41:43.535Z,1508197303.535 [CTD_NeilBrown ThreadHandler](INFO): Thread cancelled. 2017-10-16T23:41:43.536Z,1508197303.536 [CTD_NeilBrown](INFO): Join timeout helper Thread ID is 3652 2017-10-16T23:41:43.816Z,1508197303.816 [CTD_NeilBrown ThreadHandler](INFO): Uninitializing protected caller thread. 2017-10-16T23:41:43.816Z,1508197303.816 [CTD_NeilBrown](INFO): Powering down 2017-10-16T23:41:43.817Z,1508197303.817 [CTD_NeilBrown ThreadHandler](INFO): Thread cancelled. 2017-10-16T23:41:43.819Z,1508197303.819 [ComponentRegistry](INFO): Shutting down Rowe_600LCM ThreadHandler 2017-10-16T23:41:43.820Z,1508197303.820 [Rowe_600LCM ThreadHandler](INFO): Thread cancelled. 2017-10-16T23:41:43.820Z,1508197303.820 [Rowe_600LCM](INFO): Join timeout helper Thread ID is 3653 2017-10-16T23:41:44.576Z,1508197304.576 [Rowe_600LCM ThreadHandler](INFO): Uninitializing protected caller thread. 2017-10-16T23:41:44.576Z,1508197304.576 [Rowe_600LCM](INFO): Stopping potential previous instance(s) of roweadcp LCM interface 2017-10-16T23:41:44.664Z,1508197304.664 [Rowe_600LCM](INFO): Powering down 2017-10-16T23:41:44.665Z,1508197304.665 [Rowe_600LCM ThreadHandler](INFO): Thread cancelled. 2017-10-16T23:41:44.673Z,1508197304.673 [ComponentRegistry](INFO): Shutting down Radio_Surface ThreadHandler 2017-10-16T23:41:44.673Z,1508197304.673 [Radio_Surface ThreadHandler](INFO): Thread cancelled. 2017-10-16T23:41:44.673Z,1508197304.673 [Radio_Surface](INFO): Join timeout helper Thread ID is 3655 2017-10-16T23:41:44.996Z,1508197304.996 [Radio_Surface ThreadHandler](INFO): Uninitializing protected caller thread. 2017-10-16T23:41:44.996Z,1508197304.996 [Radio_Surface ThreadHandler](INFO): Thread cancelled. 2017-10-16T23:41:45.016Z,1508197305.016 [ComponentRegistry](INFO): Shutting down logger ThreadHandler 2017-10-16T23:41:45.016Z,1508197305.016 [logger ThreadHandler](INFO): Thread cancelled. 2017-10-16T23:41:45.017Z,1508197305.017 [logger](INFO): Join timeout helper Thread ID is 3656 2017-10-16T23:41:45.060Z,1508197305.060 [logger ThreadHandler](INFO): Uninitializing protected caller thread. 2017-10-16T23:41:45.060Z,1508197305.060 [logger ThreadHandler](INFO): Thread cancelled. 2017-10-16T23:41:45.076Z,1508197305.076 [ComponentRegistry](INFO): Shutting down CommandLine ThreadHandler 2017-10-16T23:41:45.076Z,1508197305.076 [CommandLine ThreadHandler](INFO): Thread cancelled. 2017-10-16T23:41:45.076Z,1508197305.076 [ComponentRegistry](INFO): Shutting down controlThread ThreadHandler 2017-10-16T23:41:45.077Z,1508197305.077 [controlThread ThreadHandler](INFO): Thread cancelled. 2017-10-16T23:41:45.077Z,1508197305.077 [controlThread](INFO): Join timeout helper Thread ID is 3657 2017-10-16T23:41:45.248Z,1508197305.248 [controlThread ThreadHandler](INFO): Uninitializing protected caller thread. 2017-10-16T23:41:45.248Z,1508197305.248 [controlThread](DEBUG): Uninitializing ControlThread 2017-10-16T23:41:45.249Z,1508197305.249 [PNI_TCM](INFO): Powering down 2017-10-16T23:41:45.336Z,1508197305.336 [Aanderaa_O2](INFO): Powering down 2017-10-16T23:41:45.339Z,1508197305.339 [DepthRateCalculator](DEBUG): Initializing DepthRateCalculator. 2017-10-16T23:41:45.340Z,1508197305.340 [NavChart](DEBUG): Uninitialize NavChart Navigation. 2017-10-16T23:41:45.341Z,1508197305.341 [MissionManager](INFO): Uninitializing Mission Default 2017-10-16T23:41:45.341Z,1508197305.341 [Default] Stopped 2017-10-16T23:41:45.341Z,1508197305.341 [Default](DEBUG): Aggregate::uninitialize Default 2017-10-16T23:41:45.341Z,1508197305.341 [Default:A.Wait] Stopped 2017-10-16T23:41:45.341Z,1508197305.341 [Default:A.Wait](DEBUG): Uninitialize Wait Component. 2017-10-16T23:41:45.341Z,1508197305.341 [Default:B.GoToSurface] Stopped 2017-10-16T23:41:45.341Z,1508197305.341 [Default:B.GoToSurface](DEBUG): Uninitialize GoToSurfaceComponent. 2017-10-16T23:41:45.344Z,1508197305.344 [VerticalControl](DEBUG): Uninitialize VerticalControlComponent. 2017-10-16T23:41:45.344Z,1508197305.344 [HorizontalControl](DEBUG): Uninitialize HorizontalControlComponent. 2017-10-16T23:41:45.345Z,1508197305.345 [SpeedControl](DEBUG): Uninitialize SpeedControlComponent. 2017-10-16T23:41:45.345Z,1508197305.345 [LoopControl](DEBUG): Uninitialize LoopControlComponent. 2017-10-16T23:41:45.345Z,1508197305.345 [BuoyancyServo](DEBUG): Uninitialize Buoyancy Servo. 2017-10-16T23:41:45.345Z,1508197305.345 [BuoyancyServo](INFO): Powering down 2017-10-16T23:41:45.360Z,1508197305.360 [ElevatorServo](DEBUG): Uninitialize Elevator Servo. 2017-10-16T23:41:45.360Z,1508197305.360 [ElevatorServo](INFO): Powering down 2017-10-16T23:41:45.361Z,1508197305.361 [RudderServo](DEBUG): Uninitialize Rudder Servo. 2017-10-16T23:41:45.361Z,1508197305.361 [RudderServo](INFO): Powering down 2017-10-16T23:41:45.362Z,1508197305.362 [ThrusterServo](DEBUG): Uninitialize Thruster Servo. 2017-10-16T23:41:45.362Z,1508197305.362 [ThrusterServo](INFO): Powering down 2017-10-16T23:41:45.363Z,1508197305.363 [SBIT](DEBUG): Uninitialize SBIT Component. 2017-10-16T23:41:45.363Z,1508197305.363 [IBIT](DEBUG): Uninitialize IBIT Component. 2017-10-16T23:41:45.363Z,1508197305.363 [CBIT](DEBUG): Uninitialize CBIT Component. 2017-10-16T23:41:45.364Z,1508197305.364 [controlThread ThreadHandler](INFO): Thread cancelled. 2017-10-16T23:41:45.411Z,1508197305.411 [Rowe_600LCM ThreadHandler](INFO): Thread cancelled. 2017-10-16T23:41:45.420Z,1508197305.420 [Radio_Surface ThreadHandler](INFO): Thread cancelled. 2017-10-16T23:41:45.453Z,1508197305.453 [WetLabsBB2FL ThreadHandler](INFO): Thread cancelled. 2017-10-16T23:41:45.457Z,1508197305.457 [CTD_NeilBrown ThreadHandler](INFO): Thread cancelled. 2017-10-16T23:41:45.505Z,1508197305.505 [NavChartDb ThreadHandler](INFO): Thread cancelled. 2017-10-16T23:41:45.555Z,1508197305.555 [logger ThreadHandler](INFO): Thread cancelled.