2016-06-07T23:18:16.556Z,1465341496.556 [Supervisor](DEBUG): Initializing supervisor.
2016-06-07T23:18:16.560Z,1465341496.560 [SyncHandler](DEBUG): Created PCaller Thread at 4034C4E0
2016-06-07T23:18:16.561Z,1465341496.561 [SyncHandler](INFO): Protected caller Thread ID is 893
2016-06-07T23:18:16.561Z,1465341496.561 [ComponentRegistry](DEBUG): Component "controlThread" handled in its own thread.
2016-06-07T23:18:16.563Z,1465341496.563 [controlThread ThreadHandler](DEBUG): Created PCaller Thread at 4037C4E0
2016-06-07T23:18:16.563Z,1465341496.563 [controlThread ThreadHandler](INFO): Protected caller Thread ID is 894
2016-06-07T23:18:16.567Z,1465341496.567 [ComponentRegistry](DEBUG): SyncComponent "CycleStarter" handled in the control thread.
2016-06-07T23:18:16.579Z,1465341496.579 [ComponentRegistry](DEBUG): Component "CommandLine" handled in its own thread.
2016-06-07T23:18:16.580Z,1465341496.580 [CommandLine ThreadHandler](DEBUG): Created PCaller Thread at 403AC4E0
2016-06-07T23:18:16.580Z,1465341496.580 [CommandLine ThreadHandler](INFO): Protected caller Thread ID is 895
2016-06-07T23:18:16.581Z,1465341496.581 [ComponentRegistry](DEBUG): Component "logger" handled in its own thread.
2016-06-07T23:18:16.582Z,1465341496.582 [logger ThreadHandler](DEBUG): Created PCaller Thread at 403DC4E0
2016-06-07T23:18:16.582Z,1465341496.582 [logger ThreadHandler](INFO): Protected caller Thread ID is 896
2016-06-07T23:18:16.584Z,1465341496.584 [ComponentRegistry](DEBUG): SyncComponent "LogSplitter" handled in the control thread.
2016-06-07T23:18:16.585Z,1465341496.585 [Supervisor](INFO): Looking for Config files in directory: Config/
2016-06-07T23:18:16.586Z,1465341496.586 [Supervisor](INFO): Opening Config file at: Config/Control.cfg
2016-06-07T23:18:16.931Z,1465341496.931 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Control
2016-06-07T23:18:16.931Z,1465341496.931 [Supervisor](INFO): Opening Config file at: Config/BIT.cfg
2016-06-07T23:18:17.099Z,1465341497.099 [ComponentRegistry](DEBUG): Loaded Config Component "Config/BIT
2016-06-07T23:18:17.099Z,1465341497.099 [Supervisor](INFO): Opening Config file at: Config/Derivation.cfg
2016-06-07T23:18:17.225Z,1465341497.225 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Derivation
2016-06-07T23:18:17.226Z,1465341497.226 [Supervisor](INFO): Opening Config file at: Config/Estimation.cfg
2016-06-07T23:18:17.358Z,1465341497.358 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Estimation
2016-06-07T23:18:17.358Z,1465341497.358 [Supervisor](INFO): Opening Config file at: Config/Guidance.cfg
2016-06-07T23:18:17.444Z,1465341497.444 [Supervisor](INFO): Opening Config file at: Config/Navigation.cfg
2016-06-07T23:18:17.635Z,1465341497.635 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Navigation
2016-06-07T23:18:17.636Z,1465341497.636 [Supervisor](INFO): Opening Config file at: Config/Sample.cfg
2016-06-07T23:18:17.722Z,1465341497.722 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Sample
2016-06-07T23:18:17.723Z,1465341497.723 [Supervisor](INFO): Opening Config file at: Config/Science.cfg
2016-06-07T23:18:17.997Z,1465341497.997 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Science
2016-06-07T23:18:17.998Z,1465341497.998 [Supervisor](INFO): Opening Config file at: Config/Sensor.cfg
2016-06-07T23:18:18.340Z,1465341498.340 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Sensor
2016-06-07T23:18:18.340Z,1465341498.340 [Supervisor](INFO): Opening Config file at: Config/Servo.cfg
2016-06-07T23:18:18.643Z,1465341498.643 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Servo
2016-06-07T23:18:18.644Z,1465341498.644 [Supervisor](INFO): Opening Config file at: Config/Simulator.cfg
2016-06-07T23:18:19.142Z,1465341499.142 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Simulator
2016-06-07T23:18:19.143Z,1465341499.143 [Supervisor](INFO): Opening Config file at: Config/logger.cfg
2016-06-07T23:18:19.346Z,1465341499.346 [ComponentRegistry](DEBUG): Loaded Config Component "Config/logger
2016-06-07T23:18:19.347Z,1465341499.347 [Supervisor](INFO): Opening Config file at: Config/secure.cfg
2016-06-07T23:18:19.451Z,1465341499.451 [ComponentRegistry](DEBUG): Loaded Config Component "Config/secure
2016-06-07T23:18:19.451Z,1465341499.451 [Supervisor](INFO): Opening Config file at: Config/vehicle.cfg
2016-06-07T23:18:19.886Z,1465341499.886 [ComponentRegistry](DEBUG): Loaded Config Component "Config/vehicle
2016-06-07T23:18:19.886Z,1465341499.886 [Supervisor](INFO): Opening Config file at: Config/workSite.cfg
2016-06-07T23:18:19.999Z,1465341499.999 [ComponentRegistry](DEBUG): Loaded Config Component "Config/workSite
2016-06-07T23:18:20.001Z,1465341500.001 [Supervisor](INFO): Looking for Config files in directory: Config/lrauv-makai/
2016-06-07T23:18:20.001Z,1465341500.001 [Supervisor](INFO): Opening Config file at: Config/lrauv-makai/Battery.cfg
2016-06-07T23:18:20.241Z,1465341500.241 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Battery
2016-06-07T23:18:20.242Z,1465341500.242 [Supervisor](INFO): Opening Config file at: Config/lrauv-makai/BIT.cfg
2016-06-07T23:18:20.360Z,1465341500.360 [Supervisor](INFO): Opening Config file at: Config/lrauv-makai/Navigation.cfg
2016-06-07T23:18:20.459Z,1465341500.459 [Supervisor](INFO): Opening Config file at: Config/lrauv-makai/Control.cfg
2016-06-07T23:18:20.556Z,1465341500.556 [Supervisor](INFO): Opening Config file at: Config/lrauv-makai/Simulator.cfg
2016-06-07T23:18:20.647Z,1465341500.647 [Supervisor](INFO): Opening Config file at: Config/lrauv-makai/Science.cfg
2016-06-07T23:18:20.801Z,1465341500.801 [Supervisor](INFO): Opening Config file at: Config/lrauv-makai/Sensor.cfg
2016-06-07T23:18:20.982Z,1465341500.982 [Supervisor](INFO): Opening Config file at: Config/lrauv-makai/Servo.cfg
2016-06-07T23:18:21.085Z,1465341501.085 [Supervisor](INFO): Opening Config file at: Config/lrauv-makai/logger.cfg
2016-06-07T23:18:21.169Z,1465341501.169 [Supervisor](INFO): Opening Config file at: Config/lrauv-makai/secure.cfg
2016-06-07T23:18:21.260Z,1465341501.260 [Supervisor](INFO): Opening Config file at: Config/lrauv-makai/vehicle.cfg
2016-06-07T23:18:21.448Z,1465341501.448 [Supervisor](INFO): Looking for Config files in directory: Config/lrauv-makai/root/
2016-06-07T23:18:21.448Z,1465341501.448 [Supervisor](IMPORTANT): Reading configuration overrides from Data/persisted.cfg
2016-06-07T23:18:21.454Z,1465341501.454 [Module Loader](DEBUG): Loading Module at Modules/BIT.so
2016-06-07T23:18:21.567Z,1465341501.567 [SBIT](DEBUG): Construct Startup Built In Test.
2016-06-07T23:18:21.597Z,1465341501.597 [SBIT] Loaded
2016-06-07T23:18:21.598Z,1465341501.598 [ComponentRegistry](DEBUG): SyncComponent "SBIT" handled in the control thread.
2016-06-07T23:18:21.598Z,1465341501.598 [IBIT](DEBUG): Construct Initiated Built In Test.
2016-06-07T23:18:21.626Z,1465341501.626 [IBIT] Loaded
2016-06-07T23:18:21.627Z,1465341501.627 [ComponentRegistry](DEBUG): SyncComponent "IBIT" handled in the control thread.
2016-06-07T23:18:21.629Z,1465341501.629 [CBIT](DEBUG): Construct Continuous Built In Test.
2016-06-07T23:18:21.765Z,1465341501.765 [CBIT] Loaded
2016-06-07T23:18:21.765Z,1465341501.765 [ComponentRegistry](DEBUG): SyncComponent "CBIT" handled in the control thread.
2016-06-07T23:18:21.765Z,1465341501.765 [Module Loader](DEBUG): Loaded Module: BIT (Contains the BuiltInTest components, such as C Built In Test)
2016-06-07T23:18:21.766Z,1465341501.766 [Module Loader](DEBUG): Loading Module at Modules/Control.so
2016-06-07T23:18:21.811Z,1465341501.811 [VerticalControl](DEBUG): Construct VerticalControl.
2016-06-07T23:18:21.911Z,1465341501.911 [VerticalControl] Loaded
2016-06-07T23:18:21.911Z,1465341501.911 [ComponentRegistry](DEBUG): SyncComponent "VerticalControl" handled in the control thread.
2016-06-07T23:18:21.912Z,1465341501.912 [HorizontalControl](DEBUG): Construct HorizontalControl.
2016-06-07T23:18:21.973Z,1465341501.973 [HorizontalControl] Loaded
2016-06-07T23:18:21.974Z,1465341501.974 [ComponentRegistry](DEBUG): SyncComponent "HorizontalControl" handled in the control thread.
2016-06-07T23:18:21.974Z,1465341501.974 [SpeedControl](DEBUG): Construct SpeedControl.
2016-06-07T23:18:21.980Z,1465341501.980 [SpeedControl] Loaded
2016-06-07T23:18:21.980Z,1465341501.980 [ComponentRegistry](DEBUG): SyncComponent "SpeedControl" handled in the control thread.
2016-06-07T23:18:21.981Z,1465341501.981 [LoopControl](DEBUG): Construct LoopControl.
2016-06-07T23:18:21.981Z,1465341501.981 [LoopControl] Loaded
2016-06-07T23:18:21.982Z,1465341501.982 [ComponentRegistry](DEBUG): SyncComponent "LoopControl" handled in the control thread.
2016-06-07T23:18:21.982Z,1465341501.982 [Module Loader](DEBUG): Loaded Module: Control (Contains the Control components, such as Depth, Heading, and Speed Control)
2016-06-07T23:18:21.983Z,1465341501.983 [Module Loader](DEBUG): Loading Module at Modules/Derivation.so
2016-06-07T23:18:22.004Z,1465341502.004 [DepthRateCalculator] Loaded
2016-06-07T23:18:22.004Z,1465341502.004 [ComponentRegistry](DEBUG): SyncComponent "DepthRateCalculator" handled in the control thread.
2016-06-07T23:18:22.010Z,1465341502.010 [PitchRateCalculator] Loaded
2016-06-07T23:18:22.010Z,1465341502.010 [ComponentRegistry](DEBUG): SyncComponent "PitchRateCalculator" handled in the control thread.
2016-06-07T23:18:22.021Z,1465341502.021 [SpeedCalculator] Loaded
2016-06-07T23:18:22.021Z,1465341502.021 [ComponentRegistry](DEBUG): SyncComponent "SpeedCalculator" handled in the control thread.
2016-06-07T23:18:22.037Z,1465341502.037 [TempGradientCalculator] Loaded
2016-06-07T23:18:22.037Z,1465341502.037 [ComponentRegistry](DEBUG): SyncComponent "TempGradientCalculator" handled in the control thread.
2016-06-07T23:18:22.054Z,1465341502.054 [VerticalTemperatureHomogeneityIndexCalculator] Loaded
2016-06-07T23:18:22.054Z,1465341502.054 [ComponentRegistry](DEBUG): SyncComponent "VerticalTemperatureHomogeneityIndexCalculator" handled in the control thread.
2016-06-07T23:18:22.059Z,1465341502.059 [YawRateCalculator] Loaded
2016-06-07T23:18:22.059Z,1465341502.059 [ComponentRegistry](DEBUG): SyncComponent "YawRateCalculator" handled in the control thread.
2016-06-07T23:18:22.060Z,1465341502.060 [Module Loader](DEBUG): Loaded Module: Derivation (Contains the base derivation components)
2016-06-07T23:18:22.060Z,1465341502.060 [Module Loader](DEBUG): Loading Module at Modules/Estimation.so
2016-06-07T23:18:22.132Z,1465341502.132 [StratificationFrontDetector](INFO): threshold set to: 0.399988 degC
2016-06-07T23:18:22.132Z,1465341502.132 [StratificationFrontDetector](DEBUG): (re)initializing
2016-06-07T23:18:22.132Z,1465341502.132 [StratificationFrontDetector] Loaded
2016-06-07T23:18:22.133Z,1465341502.133 [ComponentRegistry](DEBUG): SyncComponent "StratificationFrontDetector" handled in the control thread.
2016-06-07T23:18:22.133Z,1465341502.133 [Module Loader](DEBUG): Loaded Module: Estimation (Contains the base estimation components)
2016-06-07T23:18:22.134Z,1465341502.134 [Module Loader](DEBUG): Loading Module at Modules/Guidance.so
2016-06-07T23:18:22.347Z,1465341502.347 [Module Loader](DEBUG): Loaded Module: Guidance (Contains behaviors and commands)
2016-06-07T23:18:22.348Z,1465341502.348 [Module Loader](DEBUG): Loading Module at Modules/Navigation.so
2016-06-07T23:18:22.442Z,1465341502.442 [DeadReckonUsingMultipleVelocitySources] Loaded
2016-06-07T23:18:22.442Z,1465341502.442 [ComponentRegistry](DEBUG): SyncComponent "DeadReckonUsingMultipleVelocitySources" handled in the control thread.
2016-06-07T23:18:22.496Z,1465341502.496 [DeadReckonUsingSpeedCalculator] Loaded
2016-06-07T23:18:22.496Z,1465341502.496 [ComponentRegistry](DEBUG): SyncComponent "DeadReckonUsingSpeedCalculator" handled in the control thread.
2016-06-07T23:18:22.513Z,1465341502.513 [NavChart] Loaded
2016-06-07T23:18:22.513Z,1465341502.513 [ComponentRegistry](DEBUG): SyncComponent "NavChart" handled in the control thread.
2016-06-07T23:18:22.517Z,1465341502.517 [UniversalFixResidualReporter] Loaded
2016-06-07T23:18:22.518Z,1465341502.518 [ComponentRegistry](DEBUG): SyncComponent "UniversalFixResidualReporter" handled in the control thread.
2016-06-07T23:18:22.518Z,1465341502.518 [Module Loader](DEBUG): Loaded Module: Navigation (Contains the base navigation components)
2016-06-07T23:18:22.519Z,1465341502.519 [Module Loader](DEBUG): Loading Module at Modules/Sample.so
2016-06-07T23:18:22.524Z,1465341502.524 [Module Loader](DEBUG): Loaded Module: Sample (This is a Sample Module of Sample Components)
2016-06-07T23:18:22.525Z,1465341502.525 [Module Loader](DEBUG): Loading Module at Modules/Science.so
2016-06-07T23:18:22.700Z,1465341502.700 [Aanderaa_O2] Loaded
2016-06-07T23:18:22.700Z,1465341502.700 [ComponentRegistry](DEBUG): SyncComponent "Aanderaa_O2" handled in the control thread.
2016-06-07T23:18:22.774Z,1465341502.774 [CTD_NeilBrown] Loaded
2016-06-07T23:18:22.774Z,1465341502.774 [ComponentRegistry](DEBUG): Component "CTD_NeilBrown" handled in its own thread.
2016-06-07T23:18:22.775Z,1465341502.775 [CTD_NeilBrown ThreadHandler](DEBUG): Created PCaller Thread at 4059E4E0
2016-06-07T23:18:22.776Z,1465341502.776 [CTD_NeilBrown ThreadHandler](INFO): Protected caller Thread ID is 975
2016-06-07T23:18:22.791Z,1465341502.791 [PAR_Licor] Loaded
2016-06-07T23:18:22.791Z,1465341502.791 [ComponentRegistry](DEBUG): SyncComponent "PAR_Licor" handled in the control thread.
2016-06-07T23:18:22.839Z,1465341502.839 [WetLabsBB2FL] Loaded
2016-06-07T23:18:22.839Z,1465341502.839 [ComponentRegistry](DEBUG): Component "WetLabsBB2FL" handled in its own thread.
2016-06-07T23:18:22.840Z,1465341502.840 [WetLabsBB2FL ThreadHandler](DEBUG): Created PCaller Thread at 405CE4E0
2016-06-07T23:18:22.841Z,1465341502.841 [WetLabsBB2FL ThreadHandler](INFO): Protected caller Thread ID is 976
2016-06-07T23:18:22.841Z,1465341502.841 [Module Loader](DEBUG): Loaded Module: Science (Contains the science components)
2016-06-07T23:18:22.842Z,1465341502.842 [Module Loader](DEBUG): Loading Module at Modules/Sensor.so
2016-06-07T23:18:23.087Z,1465341503.087 [AcousticModem_Benthos_ATM900] Loaded
2016-06-07T23:18:23.087Z,1465341503.087 [ComponentRegistry](DEBUG): SyncComponent "AcousticModem_Benthos_ATM900" handled in the control thread.
2016-06-07T23:18:23.161Z,1465341503.161 [DataOverHttps] Loaded
2016-06-07T23:18:23.162Z,1465341503.162 [ComponentRegistry](DEBUG): SyncComponent "DataOverHttps" handled in the control thread.
2016-06-07T23:18:23.175Z,1465341503.175 [Depth_Keller] Loaded
2016-06-07T23:18:23.175Z,1465341503.175 [ComponentRegistry](DEBUG): SyncComponent "Depth_Keller" handled in the control thread.
2016-06-07T23:18:23.180Z,1465341503.180 [DropWeight] Loaded
2016-06-07T23:18:23.180Z,1465341503.180 [ComponentRegistry](DEBUG): SyncComponent "DropWeight" handled in the control thread.
2016-06-07T23:18:23.270Z,1465341503.270 [NAL9602] Loaded
2016-06-07T23:18:23.270Z,1465341503.270 [ComponentRegistry](DEBUG): SyncComponent "NAL9602" handled in the control thread.
2016-06-07T23:18:23.312Z,1465341503.312 [Onboard] Loaded
2016-06-07T23:18:23.312Z,1465341503.312 [ComponentRegistry](DEBUG): SyncComponent "Onboard" handled in the control thread.
2016-06-07T23:18:23.319Z,1465341503.319 [Radio_Surface] Loaded
2016-06-07T23:18:23.319Z,1465341503.319 [ComponentRegistry](DEBUG): Component "Radio_Surface" handled in its own thread.
2016-06-07T23:18:23.320Z,1465341503.320 [Radio_Surface ThreadHandler](DEBUG): Created PCaller Thread at 409E74E0
2016-06-07T23:18:23.321Z,1465341503.321 [Radio_Surface ThreadHandler](INFO): Protected caller Thread ID is 977
2016-06-07T23:18:23.367Z,1465341503.367 [PNI_TCM] Loaded
2016-06-07T23:18:23.368Z,1465341503.368 [ComponentRegistry](DEBUG): SyncComponent "PNI_TCM" handled in the control thread.
2016-06-07T23:18:23.451Z,1465341503.451 [Rowe_600LCM] Loaded
2016-06-07T23:18:23.451Z,1465341503.451 [ComponentRegistry](DEBUG): Component "Rowe_600LCM" handled in its own thread.
2016-06-07T23:18:23.453Z,1465341503.453 [Rowe_600LCM ThreadHandler](DEBUG): Created PCaller Thread at 40A174E0
2016-06-07T23:18:23.453Z,1465341503.453 [Rowe_600LCM ThreadHandler](INFO): Protected caller Thread ID is 978
2016-06-07T23:18:25.228Z,1465341505.228 [BPC1] Loaded
2016-06-07T23:18:25.228Z,1465341505.228 [ComponentRegistry](DEBUG): SyncComponent "BPC1" handled in the control thread.
2016-06-07T23:18:25.228Z,1465341505.228 [Module Loader](DEBUG): Loaded Module: Sensor (Contains the sensor components)
2016-06-07T23:18:25.229Z,1465341505.229 [Module Loader](DEBUG): Loading Module at Modules/Servo.so
2016-06-07T23:18:25.324Z,1465341505.324 [BuoyancyServo] Loaded
2016-06-07T23:18:25.324Z,1465341505.324 [ComponentRegistry](DEBUG): SyncComponent "BuoyancyServo" handled in the control thread.
2016-06-07T23:18:25.336Z,1465341505.336 [ElevatorServo] Loaded
2016-06-07T23:18:25.336Z,1465341505.336 [ComponentRegistry](DEBUG): SyncComponent "ElevatorServo" handled in the control thread.
2016-06-07T23:18:25.348Z,1465341505.348 [MassServo] Loaded
2016-06-07T23:18:25.348Z,1465341505.348 [ComponentRegistry](DEBUG): SyncComponent "MassServo" handled in the control thread.
2016-06-07T23:18:25.360Z,1465341505.360 [RudderServo] Loaded
2016-06-07T23:18:25.360Z,1465341505.360 [ComponentRegistry](DEBUG): SyncComponent "RudderServo" handled in the control thread.
2016-06-07T23:18:25.371Z,1465341505.371 [ThrusterServo] Loaded
2016-06-07T23:18:25.372Z,1465341505.372 [ComponentRegistry](DEBUG): SyncComponent "ThrusterServo" handled in the control thread.
2016-06-07T23:18:25.372Z,1465341505.372 [Module Loader](DEBUG): Loaded Module: Servo (This is the module containing motor controllers)
2016-06-07T23:18:25.373Z,1465341505.373 [Module Loader](DEBUG): Loading Module at Modules/Simulator.so
2016-06-07T23:18:25.468Z,1465341505.468 [Module Loader](DEBUG): Loaded Module: Simulator (This is the module containing the Simulator)
2016-06-07T23:18:25.469Z,1465341505.469 [Module Loader](DEBUG): Loading Module at Modules/Trigger.so
2016-06-07T23:18:25.492Z,1465341505.492 [Module Loader](DEBUG): Loaded Module: Trigger (Contains triggers for use in missions)
2016-06-07T23:18:25.496Z,1465341505.496 [ComponentRegistry](DEBUG): SyncComponent "MissionManager" handled in the control thread.
2016-06-07T23:18:25.497Z,1465341505.497 [ComponentRegistry](DEBUG): SyncComponent "Reporter" handled in the control thread.
2016-06-07T23:18:25.503Z,1465341505.503 [ComponentRegistry](DEBUG): Component "NavChartDb" handled in its own thread.
2016-06-07T23:18:25.505Z,1465341505.505 [NavChartDb ThreadHandler](DEBUG): Created PCaller Thread at 40AC54E0
2016-06-07T23:18:25.505Z,1465341505.505 [NavChartDb ThreadHandler](INFO): Protected caller Thread ID is 979
2016-06-07T23:18:25.510Z,1465341505.510 [Supervisor](INFO): Main Thread ID is 766
2016-06-07T23:18:25.510Z,1465341505.510 [Supervisor](DEBUG): Running supervisor.
2016-06-07T23:18:25.510Z,1465341505.510 [CommandLine ThreadHandler](INFO): Handler Thread ID is 980
2016-06-07T23:18:25.513Z,1465341505.513 [controlThread ThreadHandler](INFO): Handler Thread ID is 981
2016-06-07T23:18:25.514Z,1465341505.514 [controlThread](DEBUG): Initializing ControlThread
2016-06-07T23:18:25.515Z,1465341505.515 [SBIT](INFO): Initialize SBIT Component.
2016-06-07T23:18:25.515Z,1465341505.515 [SBIT](IMPORTANT): git: 2015-11-13-11-g036008f
2016-06-07T23:18:25.515Z,1465341505.515 [SBIT](INFO): git hash: 036008fb27dd1443c9c6898c567944386f491f02
2016-06-07T23:18:25.516Z,1465341505.516 [SBIT](IMPORTANT): Kernel Release: 2.6.27.8
2016-06-07T23:18:25.516Z,1465341505.516 [SBIT](IMPORTANT): Kernel Version:#639 PREEMPT Wed Mar 12 12:53:33 PDT 2014
2016-06-07T23:18:25.517Z,1465341505.517 [SBIT](INFO): Beginning SBIT in 63.000000 seconds.
2016-06-07T23:18:25.517Z,1465341505.517 [IBIT](INFO): Initialize IBIT Component.
2016-06-07T23:18:25.518Z,1465341505.518 [CBIT](DEBUG): Initialize CBIT Component.
2016-06-07T23:18:25.518Z,1465341505.518 [CBIT](CRITICAL): LAST REBOOT DUE TO WATCHDOG TIMER RESET.
2016-06-07T23:18:25.519Z,1465341505.519 [logger ThreadHandler](INFO): Handler Thread ID is 982
2016-06-07T23:18:25.538Z,1465341505.538 [CTD_NeilBrown ThreadHandler](INFO): Handler Thread ID is 983
2016-06-07T23:18:25.539Z,1465341505.539 [CTD_NeilBrown](INFO): Powering down
2016-06-07T23:18:25.542Z,1465341505.542 [VerticalControl](DEBUG): Initialize VerticalControlComponent.
2016-06-07T23:18:25.544Z,1465341505.544 [HorizontalControl](DEBUG): Initialize HorizontalControlComponent.
2016-06-07T23:18:25.544Z,1465341505.544 [SpeedControl](DEBUG): Initialize SpeedControlComponent.
2016-06-07T23:18:25.545Z,1465341505.545 [LoopControl](DEBUG): Initialize LoopControlComponent.
2016-06-07T23:18:25.545Z,1465341505.545 [DepthRateCalculator](DEBUG): Initializing DepthRateCalculator.
2016-06-07T23:18:25.546Z,1465341505.546 [PitchRateCalculator](DEBUG): Initializing PitchRateCalculator.
2016-06-07T23:18:25.546Z,1465341505.546 [SpeedCalculator](DEBUG): Initializing SpeedCalculator.
2016-06-07T23:18:25.546Z,1465341505.546 [TempGradientCalculator](DEBUG): Initializing TempGradientCalculator.
2016-06-07T23:18:25.547Z,1465341505.547 [VerticalTemperatureHomogeneityIndexCalculator](DEBUG): (re)initializing
2016-06-07T23:18:25.547Z,1465341505.547 [YawRateCalculator](DEBUG): Initializing YawRateCalculator.
2016-06-07T23:18:25.548Z,1465341505.548 [DeadReckonUsingMultipleVelocitySources](DEBUG): Initializing DeadReckonUsingMultipleVelocitySources component.
2016-06-07T23:18:25.549Z,1465341505.549 [DeadReckonUsingMultipleVelocitySources](INFO): Will consider orientation measurement stale after 120s.
2016-06-07T23:18:25.549Z,1465341505.549 [DeadReckonUsingMultipleVelocitySources](INFO): Will consider velocity measurement stale after 20s.
2016-06-07T23:18:25.554Z,1465341505.554 [DeadReckonUsingSpeedCalculator](DEBUG): Initializing DeadReckonUsingSpeedCalculator component.
2016-06-07T23:18:25.554Z,1465341505.554 [DeadReckonUsingSpeedCalculator](INFO): Will consider orientation measurement stale after 120s.
2016-06-07T23:18:25.554Z,1465341505.554 [DeadReckonUsingSpeedCalculator](INFO): Will consider velocity measurement stale after 20s.
2016-06-07T23:18:25.555Z,1465341505.555 [NavChart](DEBUG): Initialize NavChart Navigation.
2016-06-07T23:18:25.555Z,1465341505.555 [UniversalFixResidualReporter](DEBUG): Initializing UniversalFixResidualReporter component.
2016-06-07T23:18:25.566Z,1465341505.566 [MissionManager](INFO): Loading Mission: Missions/Startup.xml
2016-06-07T23:18:25.589Z,1465341505.589 [Startup:A.GoToSurface](DEBUG): Construct GoToSurface.
2016-06-07T23:18:25.598Z,1465341505.598 [WetLabsBB2FL ThreadHandler](INFO): Handler Thread ID is 984
2016-06-07T23:18:25.600Z,1465341505.600 [WetLabsBB2FL](INFO): Powering down
2016-06-07T23:18:25.634Z,1465341505.634 [Radio_Surface ThreadHandler](INFO): Handler Thread ID is 985
2016-06-07T23:18:25.641Z,1465341505.641 [Radio_Surface](INFO): Powering up
2016-06-07T23:18:25.642Z,1465341505.642 [MissionManager](DEBUG): 
<?xml version="1.0" encoding="UTF-8"?>
<Mission xmlns="Tethys"
       xmlns:Control="Tethys/Control"
       xmlns:Guidance="Tethys/Guidance" 
       xmlns:Units="Tethys/Units"
       xmlns:Universal="Tethys/Universal"
       xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
       xsi:schemaLocation="Tethys http://okeanids.mbari.org/tethys/Xml/Tethys.xsd
                           Tethys/Control http://okeanids.mbari.org/tethys/Xml/Control.xsd
                           Tethys/Guidance http://okeanids.mbari.org/tethys/Xml/Guidance.xsd
                           Tethys/Units http://okeanids.mbari.org/tethys/Xml/Units.xsd
                           Tethys/Universal http://okeanids.mbari.org/tethys/Xml/Universal.xsd"
       Id="Startup">

    <Guidance:GoToSurface>
        <Progression/>
    </Guidance:GoToSurface>

    <Aggregate Id="StartupSatComms">

        <Sequence/>

        <ReadDatum>
            <Timeout Duration="P1M" />
            <Universal:latitude_fix/>
        </ReadDatum>

        <ReadDatum>
            <Timeout Duration="P1M" />
            <Universal:platform_communications/>
        </ReadDatum>

    </Aggregate>

</Mission>


2016-06-07T23:18:25.643Z,1465341505.643 [MissionManager](INFO): Loading Mission: Missions/Default.xml
2016-06-07T23:18:25.654Z,1465341505.654 [Rowe_600LCM ThreadHandler](INFO): Handler Thread ID is 986
2016-06-07T23:18:25.655Z,1465341505.655 [Rowe_600LCM](INFO): Initializing
2016-06-07T23:18:25.656Z,1465341505.656 [Rowe_600LCM](INFO): Checking LCM
2016-06-07T23:18:25.656Z,1465341505.656 [Rowe_600LCM](IMPORTANT): LCM not connected
2016-06-07T23:18:25.656Z,1465341505.656 [Rowe_600LCM](INFO): Powering up
2016-06-07T23:18:25.670Z,1465341505.670 [NavChartDb ThreadHandler](INFO): Handler Thread ID is 987
2016-06-07T23:18:25.673Z,1465341505.673 [NavChartDb](INFO): Looking for Electronic Nav Chart files in directory: Resources/ElectronicNavigationCharts
2016-06-07T23:18:25.674Z,1465341505.674 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US1WC07M.000
2016-06-07T23:18:25.674Z,1465341505.674 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US2WC11M.000
2016-06-07T23:18:25.674Z,1465341505.674 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US3CA52M.000
2016-06-07T23:18:25.675Z,1465341505.675 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US4CA60M.000
2016-06-07T23:18:25.675Z,1465341505.675 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA50M.000
2016-06-07T23:18:25.675Z,1465341505.675 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA61M.000
2016-06-07T23:18:25.675Z,1465341505.675 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA62M.000
2016-06-07T23:18:25.675Z,1465341505.675 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA83M.000
2016-06-07T23:18:25.726Z,1465341505.726 [MissionManager](INFO): DefineArg Default.ElapsedSinceDefaultStarted = 0.000000 min
2016-06-07T23:18:25.727Z,1465341505.727 [Default:A.Wait](DEBUG): Construct Wait.
2016-06-07T23:18:25.729Z,1465341505.729 [Default:B.GoToSurface](DEBUG): Construct GoToSurface.
2016-06-07T23:18:25.755Z,1465341505.755 [Default:CheckIn:Read_Iridium:A_Timeout:A.Execute](DEBUG): Construct Execute.
2016-06-07T23:18:25.757Z,1465341505.757 [Default:CheckIn:C.Wait](DEBUG): Construct Wait.
2016-06-07T23:18:25.779Z,1465341505.779 [Default:E.Execute](DEBUG): Construct Execute.
2016-06-07T23:18:25.799Z,1465341505.799 [MissionManager](DEBUG): 
<?xml version="1.0" encoding="UTF-8"?>
<Mission xmlns="Tethys"
xmlns:Guidance="Tethys/Guidance"
xmlns:Units="Tethys/Units"
xmlns:Universal="Tethys/Universal"
xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
xsi:schemaLocation="Tethys http://okeanids.mbari.org/tethys/Xml/Tethys.xsd
Tethys/Guidance http://okeanids.mbari.org/tethys/Xml/Guidance.xsd
Tethys/Units http://okeanids.mbari.org/tethys/Xml/Units.xsd
Tethys/Universal http://okeanids.mbari.org/tethys/Xml/Universal.xsd"
Id="Default">

    <DefineArg Name="ElapsedSinceDefaultStarted"><Units:minute/><Value>0</Value></DefineArg>

    <Guidance:Wait>
        <Sequence/>
	<Description>Wait a moment to see if the scheduler starts a new mission before starting to actually run Default.
        </Description>
        <Setting><Guidance:Wait.duration/><Units:second/><Value>13</Value></Setting>
    </Guidance:Wait>

    <Guidance:GoToSurface>
        <Progression/>
    </Guidance:GoToSurface>

    <Aggregate Id="CheckIn">

        <Sequence Repeat="288"/>

        <ReadDatum Id="Read_GPS">
            <Sequence/>
            <Timeout Duration="P5M"/>
            <Universal:time_fix/>
        </ReadDatum>

        <ReadDatum Id="Read_Iridium">
            <Sequence/>
            <Timeout Duration="P2H">
                <Guidance:Execute>
                    <Sequence/>
                    <Setting><Guidance:Execute.command/><String>Burn 300</String></Setting>
                </Guidance:Execute>
                <Syslog Severity="Critical">Dropped weight due to communications timeout.</Syslog>
            </Timeout>
            <Universal:platform_communications/>
        </ReadDatum>

        <Guidance:Wait>
            <Sequence/>
            <Setting><Guidance:Wait.duration/><Units:minute/><Value>5</Value></Setting>
        </Guidance:Wait>

        <Assign><Sequence/><Arg Name="ElapsedSinceDefaultStarted"/><Elapsed><Universal:mission_started/></Elapsed></Assign>

        <Syslog Severity="Important">Default mission has been running for <Arg Name="ElapsedSinceDefaultStarted"/><Units:minute/></Syslog>

    </Aggregate>

    <Syslog Severity="Important">Restarting logs and Default mission.</Syslog>

    <Guidance:Execute>
        <Sequence/>
        <Setting><Guidance:Execute.command/><String>restart logs</String></Setting>
    </Guidance:Execute>

</Mission>


2016-06-07T23:18:25.804Z,1465341505.804 [controlThread](DEBUG): Component order: CycleStarter,Aanderaa_O2,PAR_Licor,AcousticModem_Benthos_ATM900,DataOverHttps,Depth_Keller,DropWeight,NAL9602,Onboard,PNI_TCM,BPC1,PAR_Licor,Depth_Keller,DepthRateCalculator,PitchRateCalculator,SpeedCalculator,TempGradientCalculator,VerticalTemperatureHomogeneityIndexCalculator,YawRateCalculator,StratificationFrontDetector,DeadReckonUsingMultipleVelocitySources,DeadReckonUsingSpeedCalculator,NavChart,UniversalFixResidualReporter,MissionManager,VerticalControl,HorizontalControl,SpeedControl,LoopControl,BuoyancyServo,ElevatorServo,MassServo,RudderServo,ThrusterServo,SBIT,IBIT,CBIT,Reporter,LogSplitter,
2016-06-07T23:18:25.884Z,1465341505.884 [AcousticModem_Benthos_ATM900](INFO): Powering up
2016-06-07T23:18:25.884Z,1465341505.884 [AcousticModem_Benthos_ATM900](DEBUG): Initializing AcousticModem_Benthos_ATM900.
2016-06-07T23:18:26.363Z,1465341506.363 [DeadReckonUsingMultipleVelocitySources](DEBUG): Starting up and don't have orientation data yet.
2016-06-07T23:18:26.387Z,1465341506.387 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2016-06-07T23:18:26.491Z,1465341506.491 [BuoyancyServo](DEBUG): Initializing EZServoServo.
2016-06-07T23:18:26.499Z,1465341506.499 [BuoyancyServo](DEBUG): Initializing BuoyancyServo.
2016-06-07T23:18:26.518Z,1465341506.518 [ElevatorServo](DEBUG): Initializing EZServoServo.
2016-06-07T23:18:26.524Z,1465341506.524 [ElevatorServo](DEBUG): Initializing ElevatorServo.
2016-06-07T23:18:26.549Z,1465341506.549 [MassServo](DEBUG): Initializing EZServoServo.
2016-06-07T23:18:26.556Z,1465341506.556 [MassServo](DEBUG): Initializing MassServo.
2016-06-07T23:18:26.569Z,1465341506.569 [RudderServo](DEBUG): Initializing EZServoServo.
2016-06-07T23:18:26.576Z,1465341506.576 [RudderServo](DEBUG): Initializing RudderServo.
2016-06-07T23:18:26.589Z,1465341506.589 [ThrusterServo](DEBUG): Initializing EZServoServo.
2016-06-07T23:18:26.596Z,1465341506.596 [ThrusterServo](DEBUG): Initializing ThrusterServo.
2016-06-07T23:18:26.660Z,1465341506.660 [CommandLine](FAULT): Scheduling is paused
2016-06-07T23:18:26.817Z,1465341506.817 [DeadReckonUsingMultipleVelocitySources](DEBUG): Starting up and don't have orientation data yet.
2016-06-07T23:18:26.818Z,1465341506.818 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2016-06-07T23:18:27.236Z,1465341507.236 [DeadReckonUsingMultipleVelocitySources](DEBUG): Starting up and don't have orientation data yet.
2016-06-07T23:18:27.241Z,1465341507.241 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2016-06-07T23:18:27.656Z,1465341507.656 [DeadReckonUsingMultipleVelocitySources](DEBUG): Starting up and don't have orientation data yet.
2016-06-07T23:18:27.661Z,1465341507.661 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2016-06-07T23:18:28.198Z,1465341508.198 [DeadReckonUsingMultipleVelocitySources](DEBUG): Starting up and don't have orientation data yet.
2016-06-07T23:18:28.199Z,1465341508.199 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2016-06-07T23:18:28.376Z,1465341508.376 [NAL9602](INFO): Powering up NAL9602
2016-06-07T23:18:28.411Z,1465341508.411 [DeadReckonUsingMultipleVelocitySources](DEBUG): Starting up and don't have orientation data yet.
2016-06-07T23:18:28.412Z,1465341508.412 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2016-06-07T23:18:28.834Z,1465341508.834 [DeadReckonUsingMultipleVelocitySources](DEBUG): Starting up and don't have orientation data yet.
2016-06-07T23:18:28.836Z,1465341508.836 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2016-06-07T23:18:29.288Z,1465341509.288 [Aanderaa_O2](INFO): Powering down
2016-06-07T23:18:29.617Z,1465341509.617 [DeadReckonUsingMultipleVelocitySources](DEBUG): Starting up and don't have orientation data yet.
2016-06-07T23:18:29.618Z,1465341509.618 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2016-06-07T23:18:30.015Z,1465341510.015 [Rowe_600LCM](INFO): Stopping potential previous instance(s) of Rowe LCM interface
2016-06-07T23:18:30.129Z,1465341510.129 [Rowe_600LCM](INFO): Started Rowe LCM interface with command:./bin/roweadcp -dev /dev/ttyA1 -b 38400 >& /dev/null &
2016-06-07T23:18:30.131Z,1465341510.131 [Rowe_600LCM](INFO): LCM subscribed to channel:Rowe_600LCM.adcp_dvl.bottom_track
2016-06-07T23:18:30.137Z,1465341510.137 [Rowe_600LCM](INFO): LCM subscribed to channel:Rowe_600LCM.adcp_dvl.vehicle_water_velocity
2016-06-07T23:18:33.484Z,1465341513.484 [AcousticModem_Benthos_ATM900](DEBUG): 
2016-06-07T23:18:34.682Z,1465341514.682 [AcousticModem_Benthos_ATM900](DEBUG): Teledyne Benthos ATM-900 Series OEM w/burn wire
2016-06-07T23:18:34.683Z,1465341514.683 [AcousticModem_Benthos_ATM900](DEBUG): MF Frequency Band
2016-06-07T23:18:34.683Z,1465341514.683 [AcousticModem_Benthos_ATM900](DEBUG): Standard version 8.6.3
2016-06-07T23:18:35.082Z,1465341515.082 [AcousticModem_Benthos_ATM900](DEBUG): Jun  7 2016 23:20:14 
2016-06-07T23:18:35.883Z,1465341515.883 [AcousticModem_Benthos_ATM900](INFO): entering command mode
2016-06-07T23:18:36.296Z,1465341516.296 [AcousticModem_Benthos_ATM900](DEBUG): checking for command mode acknowledgment
2016-06-07T23:18:36.297Z,1465341516.297 [AcousticModem_Benthos_ATM900](DEBUG): read user prompt 1: user:1>
2016-06-07T23:18:36.297Z,1465341516.297 [AcousticModem_Benthos_ATM900](INFO): command mode acknowledged
2016-06-07T23:18:36.697Z,1465341516.697 [AcousticModem_Benthos_ATM900](INFO): setting local address to 3
2016-06-07T23:18:37.081Z,1465341517.081 [AcousticModem_Benthos_ATM900](DEBUG): checking for local address setting acknowledgment
2016-06-07T23:18:37.081Z,1465341517.081 [AcousticModem_Benthos_ATM900](INFO): set local address to 3
2016-06-07T23:18:37.494Z,1465341517.494 [AcousticModem_Benthos_ATM900](DEBUG): read user prompt 2: user:2>
2016-06-07T23:18:39.497Z,1465341519.497 [NAL9602](INFO): NAL9602 initialized
2016-06-07T23:19:21.532Z,1465341561.532 [BPC1](ERROR): Failed to parse message.
2016-06-07T23:19:21.533Z,1465341561.533 [BPC1](ERROR): Failed to parse bank A battery data
2016-06-07T23:19:21.533Z,1465341561.533 [BPC1] Data Fault, FailCount= 1
2016-06-07T23:19:21.533Z,1465341561.533 [BPC1](ERROR): Data Fault
2016-06-07T23:19:21.592Z,1465341561.592 [CBIT](ERROR): Data Fault in component: BPC1
2016-06-07T23:19:22.858Z,1465341562.858 [CBIT](INFO): Clearing failed state for component BPC1
2016-06-07T23:19:22.858Z,1465341562.858 [BPC1] No Fault, FailCount= 1
2016-06-07T23:19:29.142Z,1465341569.142 [SBIT](IMPORTANT): Beginning Startup BIT
2016-06-07T23:19:29.148Z,1465341569.148 [CBIT](IMPORTANT): Beginning GF scan
2016-06-07T23:19:30.791Z,1465341570.791 [ElevatorServo](FAULT): Invalid EZ Servo response:"5"
2016-06-07T23:19:30.791Z,1465341570.791 [ElevatorServo] Communications Fault, FailCount= 1
2016-06-07T23:19:30.791Z,1465341570.791 [ElevatorServo](ERROR): Communications Fault
2016-06-07T23:19:30.792Z,1465341570.792 [ElevatorServo](ERROR): Elevator reporting null position
2016-06-07T23:19:30.919Z,1465341570.919 [CBIT](ERROR): Communications Fault in component: ElevatorServo
2016-06-07T23:19:31.109Z,1465341571.109 [PNI_TCM](ERROR): CRC does not match. Expected:0x43238 got:0x63
2016-06-07T23:19:31.125Z,1465341571.125 [ElevatorServo](DEBUG): Uninitialize Elevator Servo.
2016-06-07T23:19:31.125Z,1465341571.125 [ElevatorServo](INFO): Powering down
2016-06-07T23:19:31.614Z,1465341571.614 [PNI_TCM](ERROR): CRC does not match. Expected:0x63513 got:0x209
2016-06-07T23:19:32.007Z,1465341572.007 [PNI_TCM](ERROR): CRC does not match. Expected:0x28783 got:0x11
2016-06-07T23:19:32.022Z,1465341572.022 [ElevatorServo](DEBUG): Initializing EZServoServo.
2016-06-07T23:19:32.145Z,1465341572.145 [ElevatorServo](DEBUG): Initializing ElevatorServo.
2016-06-07T23:19:32.217Z,1465341572.217 [CBIT](INFO): Clearing failed state for component ElevatorServo
2016-06-07T23:19:32.217Z,1465341572.217 [ElevatorServo] No Fault, FailCount= 1
2016-06-07T23:19:32.408Z,1465341572.408 [PNI_TCM](ERROR): CRC does not match. Expected:0x10475 got:0x62
2016-06-07T23:19:32.807Z,1465341572.807 [PNI_TCM](ERROR): CRC does not match. Expected:0x24017 got:0x108
2016-06-07T23:19:33.208Z,1465341573.208 [PNI_TCM](ERROR): CRC does not match. Expected:0x32411 got:0x95
2016-06-07T23:19:33.607Z,1465341573.607 [PNI_TCM](ERROR): CRC does not match. Expected:0x43514 got:0x21
2016-06-07T23:19:34.009Z,1465341574.009 [PNI_TCM](ERROR): CRC does not match. Expected:0x29695 got:0x38
2016-06-07T23:19:34.427Z,1465341574.427 [PNI_TCM](ERROR): CRC does not match. Expected:0x54724 got:0x79
2016-06-07T23:19:34.831Z,1465341574.831 [PNI_TCM](ERROR): CRC does not match. Expected:0x4660 got:0x201
2016-06-07T23:19:35.224Z,1465341575.224 [PNI_TCM](ERROR): CRC does not match. Expected:0x1765 got:0x170
2016-06-07T23:19:35.625Z,1465341575.625 [PNI_TCM](ERROR): CRC does not match. Expected:0x63761 got:0x96
2016-06-07T23:19:36.007Z,1465341576.007 [PNI_TCM](ERROR): CRC does not match. Expected:0x65 got:0x252
2016-06-07T23:19:36.427Z,1465341576.427 [PNI_TCM](ERROR): CRC does not match. Expected:0x25203 got:0x42
2016-06-07T23:19:36.813Z,1465341576.813 [PNI_TCM](ERROR): CRC does not match. Expected:0x15018 got:0x186
2016-06-07T23:19:37.212Z,1465341577.212 [PNI_TCM](ERROR): CRC does not match. Expected:0x28160 got:0x42
2016-06-07T23:19:37.614Z,1465341577.614 [PNI_TCM](ERROR): CRC does not match. Expected:0x18039 got:0x248
2016-06-07T23:19:38.009Z,1465341578.009 [PNI_TCM](ERROR): CRC does not match. Expected:0x39402 got:0x174
2016-06-07T23:19:38.410Z,1465341578.410 [PNI_TCM](ERROR): CRC does not match. Expected:0x5368 got:0x242
2016-06-07T23:19:38.811Z,1465341578.811 [PNI_TCM](ERROR): CRC does not match. Expected:0x38883 got:0x254
2016-06-07T23:19:39.210Z,1465341579.210 [PNI_TCM](ERROR): CRC does not match. Expected:0x63877 got:0x93
2016-06-07T23:19:39.211Z,1465341579.211 [BPC1](ERROR): Failed to receive battery data
2016-06-07T23:19:39.211Z,1465341579.211 [BPC1] Communications Fault, FailCount= 2
2016-06-07T23:19:39.211Z,1465341579.211 [BPC1](ERROR): Communications Fault
2016-06-07T23:19:39.272Z,1465341579.272 [CBIT](ERROR): Communications Fault in component: BPC1
2016-06-07T23:19:39.626Z,1465341579.626 [PNI_TCM](ERROR): CRC does not match. Expected:0x20645 got:0x28
2016-06-07T23:19:40.020Z,1465341580.020 [PNI_TCM](ERROR): CRC does not match. Expected:0x3227 got:0x155
2016-06-07T23:19:40.424Z,1465341580.424 [PNI_TCM](ERROR): CRC does not match. Expected:0x16887 got:0x135
2016-06-07T23:19:40.444Z,1465341580.444 [CBIT](INFO): Clearing failed state for component BPC1
2016-06-07T23:19:40.444Z,1465341580.444 [BPC1] No Fault, FailCount= 2
2016-06-07T23:19:40.822Z,1465341580.822 [PNI_TCM](ERROR): CRC does not match. Expected:0x7218 got:0x237
2016-06-07T23:19:40.822Z,1465341580.822 [PNI_TCM](FAULT): Failed to acquire valid data within timeout.
2016-06-07T23:19:40.822Z,1465341580.822 [PNI_TCM] Data Fault, FailCount= 1
2016-06-07T23:19:40.822Z,1465341580.822 [PNI_TCM](ERROR): Data Fault
2016-06-07T23:19:40.879Z,1465341580.879 [DeadReckonUsingMultipleVelocitySources](DEBUG): Most recent orientation data is 0.447995 seconds old.
2016-06-07T23:19:40.881Z,1465341580.881 [DeadReckonUsingSpeedCalculator](DEBUG): Most recent orientation data is 0.448395 seconds old.
2016-06-07T23:19:40.892Z,1465341580.892 [CBIT](ERROR): Data Fault in component: PNI_TCM
2016-06-07T23:19:41.190Z,1465341581.190 [PNI_TCM](INFO): Powering down
2016-06-07T23:19:41.310Z,1465341581.310 [DeadReckonUsingMultipleVelocitySources](DEBUG): Most recent orientation data is 0.878360 seconds old.
2016-06-07T23:19:41.311Z,1465341581.311 [DeadReckonUsingSpeedCalculator](DEBUG): Most recent orientation data is 0.878966 seconds old.
2016-06-07T23:19:41.597Z,1465341581.597 [DeadReckonUsingMultipleVelocitySources](DEBUG): Most recent orientation data is 1.165607 seconds old.
2016-06-07T23:19:41.598Z,1465341581.598 [DeadReckonUsingSpeedCalculator](DEBUG): Most recent orientation data is 1.166007 seconds old.
2016-06-07T23:19:41.997Z,1465341581.997 [DeadReckonUsingMultipleVelocitySources](DEBUG): Most recent orientation data is 1.565528 seconds old.
2016-06-07T23:19:41.998Z,1465341581.998 [DeadReckonUsingSpeedCalculator](DEBUG): Most recent orientation data is 1.566028 seconds old.
2016-06-07T23:19:42.419Z,1465341582.419 [DeadReckonUsingMultipleVelocitySources](DEBUG): Most recent orientation data is 1.987280 seconds old.
2016-06-07T23:19:42.420Z,1465341582.420 [DeadReckonUsingSpeedCalculator](DEBUG): Most recent orientation data is 1.987680 seconds old.
2016-06-07T23:19:42.432Z,1465341582.432 [CBIT](INFO): Clearing failed state for component PNI_TCM
2016-06-07T23:19:42.432Z,1465341582.432 [PNI_TCM] No Fault, FailCount= 1
2016-06-07T23:19:42.814Z,1465341582.814 [DeadReckonUsingMultipleVelocitySources](DEBUG): Most recent orientation data is 2.382895 seconds old.
2016-06-07T23:19:42.816Z,1465341582.816 [DeadReckonUsingSpeedCalculator](DEBUG): Most recent orientation data is 2.383395 seconds old.
2016-06-07T23:19:43.195Z,1465341583.195 [DeadReckonUsingMultipleVelocitySources](DEBUG): Most recent orientation data is 2.763285 seconds old.
2016-06-07T23:19:43.196Z,1465341583.196 [DeadReckonUsingSpeedCalculator](DEBUG): Most recent orientation data is 2.763685 seconds old.
2016-06-07T23:19:43.624Z,1465341583.624 [DeadReckonUsingMultipleVelocitySources](DEBUG): Most recent orientation data is 3.192150 seconds old.
2016-06-07T23:19:43.625Z,1465341583.625 [DeadReckonUsingSpeedCalculator](DEBUG): Most recent orientation data is 3.192550 seconds old.
2016-06-07T23:19:43.998Z,1465341583.998 [DeadReckonUsingMultipleVelocitySources](DEBUG): Most recent orientation data is 3.566028 seconds old.
2016-06-07T23:19:43.999Z,1465341583.999 [DeadReckonUsingSpeedCalculator](DEBUG): Most recent orientation data is 3.566528 seconds old.
2016-06-07T23:19:44.398Z,1465341584.398 [DeadReckonUsingMultipleVelocitySources](DEBUG): Most recent orientation data is 3.966649 seconds old.
2016-06-07T23:19:44.399Z,1465341584.399 [DeadReckonUsingSpeedCalculator](DEBUG): Most recent orientation data is 3.967049 seconds old.
2016-06-07T23:19:45.033Z,1465341585.033 [DeadReckonUsingMultipleVelocitySources](DEBUG): Most recent orientation data is 4.601430 seconds old.
2016-06-07T23:19:45.034Z,1465341585.034 [DeadReckonUsingSpeedCalculator](DEBUG): Most recent orientation data is 4.602036 seconds old.
2016-06-07T23:19:45.415Z,1465341585.415 [DeadReckonUsingMultipleVelocitySources](DEBUG): Most recent orientation data is 4.983926 seconds old.
2016-06-07T23:19:45.417Z,1465341585.417 [DeadReckonUsingSpeedCalculator](DEBUG): Most recent orientation data is 4.984326 seconds old.
2016-06-07T23:19:45.818Z,1465341585.818 [DeadReckonUsingMultipleVelocitySources](DEBUG): Most recent orientation data is 5.386247 seconds old.
2016-06-07T23:19:45.819Z,1465341585.819 [DeadReckonUsingSpeedCalculator](DEBUG): Most recent orientation data is 5.386854 seconds old.
2016-06-07T23:19:55.546Z,1465341595.546 [CBIT](IMPORTANT): No ground fault detected
2016-06-07T23:20:07.190Z,1465341607.190 [DataOverHttps](DEBUG): dataRead() @791 received: vehicle=makai&busy=false, 1
2016-06-07T23:20:07.201Z,1465341607.201 [DataOverHttps](DEBUG): ParseDataRead( data = busy=false, key = 6, value = makai
2016-06-07T23:20:07.202Z,1465341607.202 [DataOverHttps](DEBUG): ParseDataRead( data = , key = 0, value = false
2016-06-07T23:20:07.237Z,1465341607.237 [DataOverHttps](INFO): setting available, lastComms_.elapsed()=0.047175
2016-06-07T23:20:17.721Z,1465341617.721 [CommandLine](IMPORTANT): got command failComponent hardware Rowe_600LCM
2016-06-07T23:20:17.721Z,1465341617.721 [Rowe_600LCM] Hardware Fault, FailCount= 1
2016-06-07T23:20:17.721Z,1465341617.721 [Rowe_600LCM](ERROR): Hardware Fault
2016-06-07T23:20:17.721Z,1465341617.721 [CommandLine](IMPORTANT): Rowe_600LCM failureMode is Hardware Fault
2016-06-07T23:20:17.812Z,1465341617.812 [CBIT](ERROR): Hardware Fault in component: Rowe_600LCM
2016-06-07T23:20:18.282Z,1465341618.282 [Rowe_600LCM](INFO): Powering down
2016-06-07T23:20:19.729Z,1465341619.729 [CBIT](INFO): Clearing failed state for component Rowe_600LCM
2016-06-07T23:20:19.729Z,1465341619.729 [Rowe_600LCM] No Fault, FailCount= 1
2016-06-07T23:20:19.887Z,1465341619.887 [Rowe_600LCM](INFO): Initializing
2016-06-07T23:20:19.888Z,1465341619.888 [Rowe_600LCM](INFO): Checking LCM
2016-06-07T23:20:19.888Z,1465341619.888 [Rowe_600LCM](IMPORTANT): LCM not connected
2016-06-07T23:20:19.888Z,1465341619.888 [Rowe_600LCM](INFO): Powering up
2016-06-07T23:20:22.927Z,1465341622.927 [SBIT](IMPORTANT): SBIT PASSED
2016-06-07T23:20:23.357Z,1465341623.357 [MissionManager](IMPORTANT): Started mission Startup
2016-06-07T23:20:23.357Z,1465341623.357 [Startup] Running Loop=1
2016-06-07T23:20:23.357Z,1465341623.357 [Startup](DEBUG): Aggregate::initialize Startup
2016-06-07T23:20:23.357Z,1465341623.357 [Startup:A.GoToSurface] Running Loop=1
2016-06-07T23:20:23.358Z,1465341623.358 [Startup:A.GoToSurface](DEBUG): Initialize GoToSurfaceComponent.
2016-06-07T23:20:23.358Z,1465341623.358 [Startup:A.GoToSurface](DEBUG): No depth rate setting specified. Using default value of nan m/s.
2016-06-07T23:20:23.359Z,1465341623.359 [Startup:A.GoToSurface](DEBUG): No pitch setting specified. Using default value of nan degrees.
2016-06-07T23:20:23.359Z,1465341623.359 [Startup:A.GoToSurface](DEBUG): No speed setting specified. Using default value of 1.000000 m/s.
2016-06-07T23:20:23.359Z,1465341623.359 [Startup:A.GoToSurface](DEBUG): No pitch timeout specified. Using default value of 20.000000 seconds.
2016-06-07T23:20:23.360Z,1465341623.360 [Startup:A.GoToSurface](DEBUG): No surface timeout specified. Using default value of 1000.000000 seconds.
2016-06-07T23:20:23.366Z,1465341623.366 [Startup:StartupSatComms] Running Loop=1
2016-06-07T23:20:23.366Z,1465341623.366 [Startup:StartupSatComms](DEBUG): Aggregate::initialize Startup:StartupSatComms
2016-06-07T23:20:23.366Z,1465341623.366 [Startup:StartupSatComms:A] Running Loop=1
2016-06-07T23:20:23.724Z,1465341623.724 [Startup:StartupSatComms:A](DEBUG): Initialize ReadDataComponent to sense latitude_fix
2016-06-07T23:20:23.980Z,1465341623.980 [Rowe_600LCM](INFO): Stopping potential previous instance(s) of Rowe LCM interface
2016-06-07T23:20:24.041Z,1465341624.041 [Rowe_600LCM](INFO): Started Rowe LCM interface with command:./bin/roweadcp -dev /dev/ttyA1 -b 38400 >& /dev/null &
2016-06-07T23:20:24.051Z,1465341624.051 [Rowe_600LCM](INFO): LCM subscribed to channel:Rowe_600LCM.adcp_dvl.bottom_track
2016-06-07T23:20:24.052Z,1465341624.052 [Rowe_600LCM](INFO): LCM subscribed to channel:Rowe_600LCM.adcp_dvl.vehicle_water_velocity
2016-06-07T23:20:46.852Z,1465341646.852 [CommandLine](IMPORTANT): got command restart application
2016-06-07T23:20:47.862Z,1465341647.862 [CommandLine ThreadHandler](INFO): Uninitializing protected caller thread.
2016-06-07T23:20:47.862Z,1465341647.862 [CommandLine ThreadHandler](INFO): Thread cancelled.
2016-06-07T23:20:47.950Z,1465341647.950 [Supervisor](DEBUG): Uninitializing supervisor and starting cleanup.  Bye!
2016-06-07T23:20:47.950Z,1465341647.950 [CommandLine ThreadHandler](INFO): Thread cancelled.
2016-06-07T23:20:47.951Z,1465341647.951 [CommandLine](INFO): Join timeout helper Thread ID is 1043
2016-06-07T23:20:47.963Z,1465341647.963 [ComponentRegistry](INFO): Shutting down NavChartDb ThreadHandler
2016-06-07T23:20:47.963Z,1465341647.963 [NavChartDb ThreadHandler](INFO): Thread cancelled.
2016-06-07T23:20:47.963Z,1465341647.963 [NavChartDb](INFO): Join timeout helper Thread ID is 1044
2016-06-07T23:20:48.123Z,1465341648.123 [NavChartDb ThreadHandler](INFO): Uninitializing protected caller thread.
2016-06-07T23:20:48.123Z,1465341648.123 [NavChartDb ThreadHandler](INFO): Thread cancelled.
2016-06-07T23:20:48.135Z,1465341648.135 [ComponentRegistry](INFO): Shutting down Rowe_600LCM ThreadHandler
2016-06-07T23:20:48.135Z,1465341648.135 [Rowe_600LCM ThreadHandler](INFO): Thread cancelled.
2016-06-07T23:20:48.136Z,1465341648.136 [Rowe_600LCM](INFO): Join timeout helper Thread ID is 1045
2016-06-07T23:20:48.392Z,1465341648.392 [Rowe_600LCM ThreadHandler](INFO): Uninitializing protected caller thread.
2016-06-07T23:20:48.392Z,1465341648.392 [Rowe_600LCM](INFO): Powering down
2016-06-07T23:20:48.393Z,1465341648.393 [Rowe_600LCM ThreadHandler](INFO): Thread cancelled.
2016-06-07T23:20:48.403Z,1465341648.403 [ComponentRegistry](INFO): Shutting down Radio_Surface ThreadHandler
2016-06-07T23:20:48.403Z,1465341648.403 [Radio_Surface ThreadHandler](INFO): Thread cancelled.
2016-06-07T23:20:48.404Z,1465341648.404 [Radio_Surface](INFO): Join timeout helper Thread ID is 1046
2016-06-07T23:20:48.412Z,1465341648.412 [Radio_Surface ThreadHandler](INFO): Uninitializing protected caller thread.
2016-06-07T23:20:48.412Z,1465341648.412 [Radio_Surface ThreadHandler](INFO): Thread cancelled.
2016-06-07T23:20:48.412Z,1465341648.412 [ComponentRegistry](INFO): Shutting down WetLabsBB2FL ThreadHandler
2016-06-07T23:20:48.413Z,1465341648.413 [WetLabsBB2FL ThreadHandler](INFO): Thread cancelled.
2016-06-07T23:20:48.413Z,1465341648.413 [WetLabsBB2FL](INFO): Join timeout helper Thread ID is 1047
2016-06-07T23:20:48.552Z,1465341648.552 [WetLabsBB2FL ThreadHandler](INFO): Uninitializing protected caller thread.
2016-06-07T23:20:48.552Z,1465341648.552 [WetLabsBB2FL](INFO): Powering down
2016-06-07T23:20:48.553Z,1465341648.553 [WetLabsBB2FL ThreadHandler](INFO): Thread cancelled.
2016-06-07T23:20:48.560Z,1465341648.560 [ComponentRegistry](INFO): Shutting down CTD_NeilBrown ThreadHandler
2016-06-07T23:20:48.561Z,1465341648.561 [CTD_NeilBrown ThreadHandler](INFO): Thread cancelled.
2016-06-07T23:20:48.561Z,1465341648.561 [CTD_NeilBrown](INFO): Join timeout helper Thread ID is 1048
2016-06-07T23:20:48.888Z,1465341648.888 [CTD_NeilBrown ThreadHandler](INFO): Uninitializing protected caller thread.
2016-06-07T23:20:48.888Z,1465341648.888 [CTD_NeilBrown](INFO): Powering down
2016-06-07T23:20:48.889Z,1465341648.889 [CTD_NeilBrown ThreadHandler](INFO): Thread cancelled.
2016-06-07T23:20:48.901Z,1465341648.901 [ComponentRegistry](INFO): Shutting down logger ThreadHandler
2016-06-07T23:20:48.901Z,1465341648.901 [logger ThreadHandler](INFO): Thread cancelled.
2016-06-07T23:20:48.901Z,1465341648.901 [logger](INFO): Join timeout helper Thread ID is 1049
2016-06-07T23:20:48.932Z,1465341648.932 [logger ThreadHandler](INFO): Uninitializing protected caller thread.
2016-06-07T23:20:48.933Z,1465341648.933 [logger ThreadHandler](INFO): Thread cancelled.
2016-06-07T23:20:48.934Z,1465341648.934 [ComponentRegistry](INFO): Shutting down CommandLine ThreadHandler
2016-06-07T23:20:48.934Z,1465341648.934 [CommandLine ThreadHandler](INFO): Thread cancelled.
2016-06-07T23:20:48.934Z,1465341648.934 [ComponentRegistry](INFO): Shutting down controlThread ThreadHandler
2016-06-07T23:20:48.934Z,1465341648.934 [controlThread ThreadHandler](INFO): Thread cancelled.
2016-06-07T23:20:48.935Z,1465341648.935 [controlThread](INFO): Join timeout helper Thread ID is 1050
2016-06-07T23:20:49.020Z,1465341649.020 [controlThread ThreadHandler](INFO): Uninitializing protected caller thread.
2016-06-07T23:20:49.020Z,1465341649.020 [controlThread](DEBUG): Uninitializing ControlThread
2016-06-07T23:20:49.021Z,1465341649.021 [Aanderaa_O2](INFO): Powering down
2016-06-07T23:20:49.022Z,1465341649.022 [AcousticModem_Benthos_ATM900](INFO): Powering down
2016-06-07T23:20:49.023Z,1465341649.023 [NAL9602](INFO): Powering down
2016-06-07T23:20:49.024Z,1465341649.024 [PNI_TCM](INFO): Powering down
2016-06-07T23:20:49.025Z,1465341649.025 [DepthRateCalculator](DEBUG): Initializing DepthRateCalculator.
2016-06-07T23:20:49.026Z,1465341649.026 [NavChart](DEBUG): Uninitialize NavChart Navigation.
2016-06-07T23:20:49.029Z,1465341649.029 [Startup] Stopped
2016-06-07T23:20:49.029Z,1465341649.029 [Startup](DEBUG): Aggregate::uninitialize Startup
2016-06-07T23:20:49.029Z,1465341649.029 [Startup:A.GoToSurface] Stopped
2016-06-07T23:20:49.029Z,1465341649.029 [Startup:A.GoToSurface](DEBUG): Uninitialize GoToSurfaceComponent.
2016-06-07T23:20:49.029Z,1465341649.029 [Startup:StartupSatComms] Stopped
2016-06-07T23:20:49.029Z,1465341649.029 [Startup:StartupSatComms](DEBUG): Aggregate::uninitialize Startup:StartupSatComms
2016-06-07T23:20:49.029Z,1465341649.029 [Startup:StartupSatComms:A] Stopped
2016-06-07T23:20:49.031Z,1465341649.031 [VerticalControl](DEBUG): Uninitialize VerticalControlComponent.
2016-06-07T23:20:49.031Z,1465341649.031 [HorizontalControl](DEBUG): Uninitialize HorizontalControlComponent.
2016-06-07T23:20:49.031Z,1465341649.031 [SpeedControl](DEBUG): Uninitialize SpeedControlComponent.
2016-06-07T23:20:49.031Z,1465341649.031 [LoopControl](DEBUG): Uninitialize LoopControlComponent.
2016-06-07T23:20:49.031Z,1465341649.031 [BuoyancyServo](DEBUG): Uninitialize Buoyancy Servo.
2016-06-07T23:20:49.032Z,1465341649.032 [BuoyancyServo](INFO): Powering down
2016-06-07T23:20:49.045Z,1465341649.045 [ElevatorServo](DEBUG): Uninitialize Elevator Servo.
2016-06-07T23:20:49.045Z,1465341649.045 [ElevatorServo](INFO): Powering down
2016-06-07T23:20:49.046Z,1465341649.046 [MassServo](DEBUG): Uninitialize Mass Servo.
2016-06-07T23:20:49.046Z,1465341649.046 [MassServo](INFO): Powering down
2016-06-07T23:20:49.046Z,1465341649.046 [RudderServo](DEBUG): Uninitialize Rudder Servo.
2016-06-07T23:20:49.047Z,1465341649.047 [RudderServo](INFO): Powering down
2016-06-07T23:20:49.047Z,1465341649.047 [ThrusterServo](DEBUG): Uninitialize Thruster Servo.
2016-06-07T23:20:49.047Z,1465341649.047 [ThrusterServo](INFO): Powering down
2016-06-07T23:20:49.048Z,1465341649.048 [SBIT](DEBUG): Uninitialize SBIT Component.
2016-06-07T23:20:49.049Z,1465341649.049 [IBIT](DEBUG): Uninitialize IBIT Component.
2016-06-07T23:20:49.049Z,1465341649.049 [CBIT](DEBUG): Uninitialize CBIT Component.
2016-06-07T23:20:49.081Z,1465341649.081 [controlThread ThreadHandler](INFO): Thread cancelled.
2016-06-07T23:20:49.171Z,1465341649.171 [WetLabsBB2FL ThreadHandler](INFO): Thread cancelled.
2016-06-07T23:20:49.175Z,1465341649.175 [CTD_NeilBrown ThreadHandler](INFO): Thread cancelled.
2016-06-07T23:20:49.305Z,1465341649.305 [Rowe_600LCM ThreadHandler](INFO): Thread cancelled.
2016-06-07T23:20:49.313Z,1465341649.313 [Radio_Surface ThreadHandler](INFO): Thread cancelled.
2016-06-07T23:20:49.407Z,1465341649.407 [NavChartDb ThreadHandler](INFO): Thread cancelled.
2016-06-07T23:20:49.523Z,1465341649.523 [logger ThreadHandler](INFO): Thread cancelled.