INFO 2019-01-03 00:13:09,680Z lrauvNc4ToNetcdf.py processResampleNc4File():879 Reading /mbari/LRAUV/makai/missionlogs/2016/20161214_20161219/20161218T210505/201612182105_201612210151.nc4 file...
INFO 2019-01-03 00:13:18,162Z lrauvNc4ToNetcdf.py processResampleNc4File():922 Variable fix_residual_percent_distance_traveled empty so skipping
INFO 2019-01-03 00:13:18,205Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group DeadReckonUsingMultipleVelocitySources parameter longitude renaming to pose_longitude_DeadReckonUsingMultipleVelocitySources
INFO 2019-01-03 00:13:18,249Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group DeadReckonUsingMultipleVelocitySources parameter latitude renaming to pose_latitude_DeadReckonUsingMultipleVelocitySources
INFO 2019-01-03 00:13:18,285Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group DeadReckonUsingMultipleVelocitySources parameter depth renaming to pose_depth_DeadReckonUsingMultipleVelocitySources
INFO 2019-01-03 00:13:18,324Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group DeadReckonUsingSpeedCalculator parameter fix_residual_percent_distance_traveled renaming to fix_residual_percent_distance_traveled_DeadReckonUsingSpeedCalculator
INFO 2019-01-03 00:13:18,848Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group DeadReckonUsingSpeedCalculator parameter longitude renaming to pose_longitude_DeadReckonUsingSpeedCalculator
INFO 2019-01-03 00:13:19,368Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group DeadReckonUsingSpeedCalculator parameter latitude renaming to pose_latitude_DeadReckonUsingSpeedCalculator
INFO 2019-01-03 00:13:19,836Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group DeadReckonUsingSpeedCalculator parameter depth renaming to pose_depth_DeadReckonUsingSpeedCalculator
INFO 2019-01-03 00:13:20,088Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group Aanderaa_O2 parameter mass_concentration_of_oxygen_in_sea_water renaming to oxygen
INFO 2019-01-03 00:13:20,789Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group CTD_NeilBrown parameter sea_water_salinity renaming to salinity
INFO 2019-01-03 00:13:21,525Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group CTD_NeilBrown parameter sea_water_temperature renaming to temperature
WARNING 2019-01-03 00:13:21,525Z lrauvNc4ToNetcdf.py processResampleNc4File():961 'mole_concentration_of_nitrate_in_sea_water' not in /mbari/LRAUV/makai/missionlogs/2016/20161214_20161219/20161218T210505/201612182105_201612210151.nc4
INFO 2019-01-03 00:13:22,006Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group PAR_Licor parameter downwelling_photosynthetic_photon_flux_in_sea_water renaming to PAR
INFO 2019-01-03 00:13:23,563Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group WetLabsBB2FL parameter mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll
INFO 2019-01-03 00:13:25,035Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group WetLabsBB2FL parameter Output470 renaming to bbp470
INFO 2019-01-03 00:13:26,546Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group WetLabsBB2FL parameter Output650 renaming to bbp650
INFO 2019-01-03 00:13:26,615Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group BPC1 parameter platform_battery_charge renaming to health_platform_battery_charge
INFO 2019-01-03 00:13:26,657Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group BPC1 parameter platform_battery_voltage renaming to health_platform_average_voltage
INFO 2019-01-03 00:13:26,694Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group NAL9602 parameter time_fix renaming to fix_time
INFO 2019-01-03 00:13:26,740Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude
INFO 2019-01-03 00:13:26,771Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude
INFO 2019-01-03 00:13:26,785Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group Onboard parameter platform_average_current renaming to health_platform_average_current
INFO 2019-01-03 00:13:26,813Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position
INFO 2019-01-03 00:13:26,893Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle
INFO 2019-01-03 00:13:26,922Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position
INFO 2019-01-03 00:13:26,969Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle
INFO 2019-01-03 00:13:27,376Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate
INFO 2019-01-03 00:13:27,868Z lrauvNc4ToNetcdf.py createNav():449 platform_pitch_angle -> pitch: {'units': 'n/a', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'}
INFO 2019-01-03 00:13:28,398Z lrauvNc4ToNetcdf.py createNav():449 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'}
INFO 2019-01-03 00:13:28,987Z lrauvNc4ToNetcdf.py createNav():449 platform_orientation -> yaw: {'units': 'n/a', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'}
INFO 2019-01-03 00:13:28,989Z lrauvNc4ToNetcdf.py nudge_coords():544 /mbari/LRAUV/makai/missionlogs/2016/20161214_20161219/20161218T210505/201612182105_201612210151.nc4
INFO 2019-01-03 00:13:29,759Z lrauvNc4ToNetcdf.py nudge_coords():552 seg#  end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s)
INFO 2019-01-03 00:13:29,761Z lrauvNc4ToNetcdf.py nudge_coords():568                  -            -            -         0    0.00              -              -
WARNING 2019-01-03 00:13:29,762Z lrauvNc4ToNetcdf.py nudge_coords():577 end_sec_diff (0.363856792) < max_sec_diff_at_end (10)
INFO 2019-01-03 00:13:29,765Z lrauvNc4ToNetcdf.py nudge_coords():589    0:        0.364   -0.0004685   -0.0002488       793    5.34          -6.09          -8.64
WARNING 2019-01-03 00:13:29,769Z lrauvNc4ToNetcdf.py nudge_coords():577 end_sec_diff (0.399009943) < max_sec_diff_at_end (10)
INFO 2019-01-03 00:13:29,770Z lrauvNc4ToNetcdf.py nudge_coords():589    1:        0.399   -0.0000645   -0.0000218        94    0.76          -3.74          -5.31
WARNING 2019-01-03 00:13:29,773Z lrauvNc4ToNetcdf.py nudge_coords():577 end_sec_diff (0.340080976) < max_sec_diff_at_end (10)
INFO 2019-01-03 00:13:29,774Z lrauvNc4ToNetcdf.py nudge_coords():589    2:        0.340   -0.0017267   -0.0003737      2007   16.82          -2.90          -4.12
WARNING 2019-01-03 00:13:29,777Z lrauvNc4ToNetcdf.py nudge_coords():577 end_sec_diff (0.376420975) < max_sec_diff_at_end (10)
INFO 2019-01-03 00:13:29,779Z lrauvNc4ToNetcdf.py nudge_coords():589    3:        0.376   -0.0019605    0.0048098      6198   50.90          12.39          17.51
WARNING 2019-01-03 00:13:29,783Z lrauvNc4ToNetcdf.py nudge_coords():577 end_sec_diff (0.302616835) < max_sec_diff_at_end (10)
INFO 2019-01-03 00:13:29,784Z lrauvNc4ToNetcdf.py nudge_coords():589    4:        0.303   -0.0004333    0.0000275       289    2.61           1.38           1.95
WARNING 2019-01-03 00:13:29,787Z lrauvNc4ToNetcdf.py nudge_coords():577 end_sec_diff (0.386285066) < max_sec_diff_at_end (10)
INFO 2019-01-03 00:13:29,788Z lrauvNc4ToNetcdf.py nudge_coords():589    5:        0.386   -0.0003017    0.0054946      6284   51.77          13.93          19.67
WARNING 2019-01-03 00:13:29,793Z lrauvNc4ToNetcdf.py nudge_coords():577 end_sec_diff (0.281388998) < max_sec_diff_at_end (10)
INFO 2019-01-03 00:13:29,794Z lrauvNc4ToNetcdf.py nudge_coords():589    6:        0.281   -0.0003315    0.0000132       569    4.04           0.43           0.60
INFO 2019-01-03 00:13:29,798Z lrauvNc4ToNetcdf.py nudge_coords():613    8:            -            -            -      5021   33.81              -              -
INFO 2019-01-03 00:13:29,798Z lrauvNc4ToNetcdf.py nudge_coords():617 Points in final series = 21255
INFO 2019-01-03 00:13:29,845Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():490 http://odss.mbari.org/trackingdb/position/makai_ac/between/20161218T200516/20161219T005321/data.csv
INFO 2019-01-03 00:13:29,867Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():513 Found 0 position values from the Tracking database
INFO 2019-01-03 00:13:29,872Z lrauvNc4ToNetcdf.py processResampleNc4File():1005 ['pose_longitude_DeadReckonUsingMultipleVelocitySources', 'pose_latitude_DeadReckonUsingMultipleVelocitySources', 'pose_depth_DeadReckonUsingMultipleVelocitySources', 'fix_residual_percent_distance_traveled_DeadReckonUsingSpeedCalculator', 'pose_longitude_DeadReckonUsingSpeedCalculator', 'pose_latitude_DeadReckonUsingSpeedCalculator', 'pose_depth_DeadReckonUsingSpeedCalculator', 'oxygen', 'salinity', 'temperature', 'PAR', 'chlorophyll', 'bbp470', 'bbp650', 'health_platform_battery_charge', 'health_platform_average_voltage', 'fix_time', 'fix_latitude', 'fix_longitude', 'health_platform_average_current', 'control_inputs_buoyancy_position', 'control_inputs_elevator_angle', 'control_inputs_mass_position', 'control_inputs_rudder_angle', 'control_inputs_propeller_rotation_rate', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time']
INFO 2019-01-03 00:13:30,253Z lrauvNc4ToNetcdf.py processResampleNc4File():1008 Wrote /mbari/LRAUV/makai/missionlogs/2016/20161214_20161219/20161218T210505/201612182105_201612210151_2S_scieng.nc