INFO 2019-01-03 00:10:12,930Z lrauvNc4ToNetcdf.py processResampleNc4File():879 Reading /mbari/LRAUV/makai/missionlogs/2016/20161214_20161219/20161218T001506/201612180015_201612182015.nc4 file...
INFO 2019-01-03 00:11:09,468Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group DeadReckonUsingMultipleVelocitySources parameter fix_residual_percent_distance_traveled renaming to fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources
INFO 2019-01-03 00:11:13,036Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group DeadReckonUsingMultipleVelocitySources parameter longitude renaming to pose_longitude_DeadReckonUsingMultipleVelocitySources
INFO 2019-01-03 00:11:16,486Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group DeadReckonUsingMultipleVelocitySources parameter latitude renaming to pose_latitude_DeadReckonUsingMultipleVelocitySources
INFO 2019-01-03 00:11:20,048Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group DeadReckonUsingMultipleVelocitySources parameter depth renaming to pose_depth_DeadReckonUsingMultipleVelocitySources
INFO 2019-01-03 00:11:20,106Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group DeadReckonUsingSpeedCalculator parameter fix_residual_percent_distance_traveled renaming to fix_residual_percent_distance_traveled_DeadReckonUsingSpeedCalculator
INFO 2019-01-03 00:11:23,726Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group DeadReckonUsingSpeedCalculator parameter longitude renaming to pose_longitude_DeadReckonUsingSpeedCalculator
INFO 2019-01-03 00:11:27,325Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group DeadReckonUsingSpeedCalculator parameter latitude renaming to pose_latitude_DeadReckonUsingSpeedCalculator
INFO 2019-01-03 00:11:30,879Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group DeadReckonUsingSpeedCalculator parameter depth renaming to pose_depth_DeadReckonUsingSpeedCalculator
INFO 2019-01-03 00:11:32,269Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group Aanderaa_O2 parameter mass_concentration_of_oxygen_in_sea_water renaming to oxygen
INFO 2019-01-03 00:11:40,133Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group CTD_NeilBrown parameter sea_water_salinity renaming to salinity
INFO 2019-01-03 00:11:47,623Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group CTD_NeilBrown parameter sea_water_temperature renaming to temperature
WARNING 2019-01-03 00:11:47,624Z lrauvNc4ToNetcdf.py processResampleNc4File():961 'mole_concentration_of_nitrate_in_sea_water' not in /mbari/LRAUV/makai/missionlogs/2016/20161214_20161219/20161218T001506/201612180015_201612182015.nc4
INFO 2019-01-03 00:11:51,081Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group PAR_Licor parameter downwelling_photosynthetic_photon_flux_in_sea_water renaming to PAR
INFO 2019-01-03 00:12:09,518Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group WetLabsBB2FL parameter mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll
INFO 2019-01-03 00:12:25,780Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group WetLabsBB2FL parameter Output470 renaming to bbp470
INFO 2019-01-03 00:12:39,808Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group WetLabsBB2FL parameter Output650 renaming to bbp650
INFO 2019-01-03 00:12:39,906Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group BPC1 parameter platform_battery_charge renaming to health_platform_battery_charge
INFO 2019-01-03 00:12:39,950Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group BPC1 parameter platform_battery_voltage renaming to health_platform_average_voltage
INFO 2019-01-03 00:12:40,004Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group NAL9602 parameter time_fix renaming to fix_time
INFO 2019-01-03 00:12:40,028Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude
INFO 2019-01-03 00:12:40,058Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude
INFO 2019-01-03 00:12:40,117Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group Onboard parameter platform_average_current renaming to health_platform_average_current
INFO 2019-01-03 00:12:40,318Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position
INFO 2019-01-03 00:12:40,829Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle
INFO 2019-01-03 00:12:40,934Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position
INFO 2019-01-03 00:12:41,699Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle
INFO 2019-01-03 00:12:44,694Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate
INFO 2019-01-03 00:12:48,323Z lrauvNc4ToNetcdf.py createNav():449 platform_pitch_angle -> pitch: {'units': 'n/a', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'}
INFO 2019-01-03 00:12:51,747Z lrauvNc4ToNetcdf.py createNav():449 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'}
INFO 2019-01-03 00:12:55,180Z lrauvNc4ToNetcdf.py createNav():449 platform_orientation -> yaw: {'units': 'n/a', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'}
INFO 2019-01-03 00:12:55,184Z lrauvNc4ToNetcdf.py nudge_coords():544 /mbari/LRAUV/makai/missionlogs/2016/20161214_20161219/20161218T001506/201612180015_201612182015.nc4
INFO 2019-01-03 00:12:59,503Z lrauvNc4ToNetcdf.py nudge_coords():552 seg#  end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s)
INFO 2019-01-03 00:12:59,506Z lrauvNc4ToNetcdf.py nudge_coords():568                  -            -            -         0    0.00              -              -
WARNING 2019-01-03 00:12:59,508Z lrauvNc4ToNetcdf.py nudge_coords():577 end_sec_diff (0.365792036) < max_sec_diff_at_end (10)
INFO 2019-01-03 00:12:59,528Z lrauvNc4ToNetcdf.py nudge_coords():589    0:        0.366    0.0042669   -0.0008644      7524   50.54          -2.25          -3.17
WARNING 2019-01-03 00:12:59,534Z lrauvNc4ToNetcdf.py nudge_coords():577 end_sec_diff (0.324645042) < max_sec_diff_at_end (10)
INFO 2019-01-03 00:12:59,535Z lrauvNc4ToNetcdf.py nudge_coords():589    1:        0.325    0.0002670   -0.0000950       436    3.12          -3.99          -5.64
WARNING 2019-01-03 00:12:59,539Z lrauvNc4ToNetcdf.py nudge_coords():577 end_sec_diff (0.317429066) < max_sec_diff_at_end (10)
INFO 2019-01-03 00:12:59,540Z lrauvNc4ToNetcdf.py nudge_coords():589    2:        0.317    0.0032279    0.0007418      8113   54.11           1.80           2.54
WARNING 2019-01-03 00:12:59,545Z lrauvNc4ToNetcdf.py nudge_coords():577 end_sec_diff (0.374197006) < max_sec_diff_at_end (10)
INFO 2019-01-03 00:12:59,547Z lrauvNc4ToNetcdf.py nudge_coords():589    3:        0.374    0.0003632   -0.0004205       713    4.96         -11.13         -15.70
WARNING 2019-01-03 00:12:59,550Z lrauvNc4ToNetcdf.py nudge_coords():577 end_sec_diff (0.345324993) < max_sec_diff_at_end (10)
INFO 2019-01-03 00:12:59,552Z lrauvNc4ToNetcdf.py nudge_coords():589    4:        0.345    0.0012916   -0.0002724      7728   51.56          -0.69          -0.98
WARNING 2019-01-03 00:12:59,557Z lrauvNc4ToNetcdf.py nudge_coords():577 end_sec_diff (0.312356949) < max_sec_diff_at_end (10)
INFO 2019-01-03 00:12:59,558Z lrauvNc4ToNetcdf.py nudge_coords():589    5:        0.312    0.0000205   -0.0004560       626    4.45         -13.46         -19.00
WARNING 2019-01-03 00:12:59,562Z lrauvNc4ToNetcdf.py nudge_coords():577 end_sec_diff (0.344600916) < max_sec_diff_at_end (10)
INFO 2019-01-03 00:12:59,563Z lrauvNc4ToNetcdf.py nudge_coords():589    6:        0.345   -0.0020975   -0.0006916      8004   53.40          -1.70          -2.40
WARNING 2019-01-03 00:12:59,569Z lrauvNc4ToNetcdf.py nudge_coords():577 end_sec_diff (0.335184812) < max_sec_diff_at_end (10)
INFO 2019-01-03 00:12:59,570Z lrauvNc4ToNetcdf.py nudge_coords():589    7:        0.335   -0.0001818   -0.0002037       290    2.14         -12.49         -17.61
WARNING 2019-01-03 00:12:59,574Z lrauvNc4ToNetcdf.py nudge_coords():577 end_sec_diff (0.369801998) < max_sec_diff_at_end (10)
INFO 2019-01-03 00:12:59,575Z lrauvNc4ToNetcdf.py nudge_coords():589    8:        0.370   -0.0020818   -0.0000563      4821   32.14          -0.23          -0.32
WARNING 2019-01-03 00:12:59,579Z lrauvNc4ToNetcdf.py nudge_coords():577 end_sec_diff (0.350658893) < max_sec_diff_at_end (10)
INFO 2019-01-03 00:12:59,581Z lrauvNc4ToNetcdf.py nudge_coords():589    9:        0.351   -0.0010123   -0.0007088      1659   11.14          -8.35         -11.79
WARNING 2019-01-03 00:12:59,585Z lrauvNc4ToNetcdf.py nudge_coords():577 end_sec_diff (0.367019176) < max_sec_diff_at_end (10)
INFO 2019-01-03 00:12:59,586Z lrauvNc4ToNetcdf.py nudge_coords():589   10:        0.367   -0.0018845   -0.0013080      3069   20.57          -8.34         -11.78
WARNING 2019-01-03 00:12:59,590Z lrauvNc4ToNetcdf.py nudge_coords():577 end_sec_diff (0.356165886) < max_sec_diff_at_end (10)
INFO 2019-01-03 00:12:59,591Z lrauvNc4ToNetcdf.py nudge_coords():589   11:        0.356   -0.0001879   -0.0000888       226    1.60          -7.29         -10.30
WARNING 2019-01-03 00:12:59,595Z lrauvNc4ToNetcdf.py nudge_coords():577 end_sec_diff (0.331289053) < max_sec_diff_at_end (10)
INFO 2019-01-03 00:12:59,596Z lrauvNc4ToNetcdf.py nudge_coords():589   12:        0.331   -0.0002777   -0.0001033       333    2.43          -5.58          -7.89
WARNING 2019-01-03 00:12:59,600Z lrauvNc4ToNetcdf.py nudge_coords():577 end_sec_diff (0.311533928) < max_sec_diff_at_end (10)
INFO 2019-01-03 00:12:59,601Z lrauvNc4ToNetcdf.py nudge_coords():589   13:        0.312   -0.0118790    0.0074378     14433   96.23          10.24          14.32
WARNING 2019-01-03 00:12:59,606Z lrauvNc4ToNetcdf.py nudge_coords():577 end_sec_diff (0.350859165) < max_sec_diff_at_end (10)
INFO 2019-01-03 00:12:59,607Z lrauvNc4ToNetcdf.py nudge_coords():589   14:        0.351   -0.0003875    0.0001690       359    2.61           8.59          12.02
WARNING 2019-01-03 00:12:59,612Z lrauvNc4ToNetcdf.py nudge_coords():577 end_sec_diff (0.364156961) < max_sec_diff_at_end (10)
INFO 2019-01-03 00:12:59,613Z lrauvNc4ToNetcdf.py nudge_coords():589   15:        0.364   -0.0097088    0.0122288     14067   93.79          17.38          24.16
WARNING 2019-01-03 00:12:59,618Z lrauvNc4ToNetcdf.py nudge_coords():577 end_sec_diff (0.364581108) < max_sec_diff_at_end (10)
INFO 2019-01-03 00:12:59,619Z lrauvNc4ToNetcdf.py nudge_coords():589   16:        0.365   -0.0027555    0.0003310      2395   16.33           2.70           3.76
WARNING 2019-01-03 00:12:59,624Z lrauvNc4ToNetcdf.py nudge_coords():577 end_sec_diff (0.353816986) < max_sec_diff_at_end (10)
INFO 2019-01-03 00:12:59,625Z lrauvNc4ToNetcdf.py nudge_coords():589   17:        0.354   -0.0042995    0.0170390     14338   95.59          23.74          33.03
WARNING 2019-01-03 00:12:59,630Z lrauvNc4ToNetcdf.py nudge_coords():577 end_sec_diff (0.351158857) < max_sec_diff_at_end (10)
INFO 2019-01-03 00:12:59,631Z lrauvNc4ToNetcdf.py nudge_coords():589   18:        0.351   -0.0005797    0.0002322       611    4.32           7.17           9.97
WARNING 2019-01-03 00:12:59,635Z lrauvNc4ToNetcdf.py nudge_coords():577 end_sec_diff (0.358660936) < max_sec_diff_at_end (10)
INFO 2019-01-03 00:12:59,637Z lrauvNc4ToNetcdf.py nudge_coords():589   19:        0.359    0.0006345    0.0139356     14076   93.85          19.74          27.52
WARNING 2019-01-03 00:12:59,642Z lrauvNc4ToNetcdf.py nudge_coords():577 end_sec_diff (0.292991162) < max_sec_diff_at_end (10)
INFO 2019-01-03 00:12:59,643Z lrauvNc4ToNetcdf.py nudge_coords():589   20:        0.293   -0.0002037    0.0002132       464    3.37           8.42          11.73
WARNING 2019-01-03 00:12:59,647Z lrauvNc4ToNetcdf.py nudge_coords():577 end_sec_diff (0.333850145) < max_sec_diff_at_end (10)
INFO 2019-01-03 00:12:59,649Z lrauvNc4ToNetcdf.py nudge_coords():589   21:        0.334    0.0069720    0.0108236     14001   93.35          15.40          21.49
WARNING 2019-01-03 00:12:59,654Z lrauvNc4ToNetcdf.py nudge_coords():577 end_sec_diff (0.346148968) < max_sec_diff_at_end (10)
INFO 2019-01-03 00:12:59,655Z lrauvNc4ToNetcdf.py nudge_coords():589   22:        0.346    0.0002978    0.0004215       610    4.37          12.82          17.88
WARNING 2019-01-03 00:12:59,659Z lrauvNc4ToNetcdf.py nudge_coords():577 end_sec_diff (0.352293014) < max_sec_diff_at_end (10)
INFO 2019-01-03 00:12:59,661Z lrauvNc4ToNetcdf.py nudge_coords():589   23:        0.352    0.0084659    0.0093238     14315   95.45          12.95          18.10
WARNING 2019-01-03 00:12:59,666Z lrauvNc4ToNetcdf.py nudge_coords():577 end_sec_diff (0.349421024) < max_sec_diff_at_end (10)
INFO 2019-01-03 00:12:59,667Z lrauvNc4ToNetcdf.py nudge_coords():589   24:        0.349    0.0001870    0.0003235       794    5.62           7.63          10.66
WARNING 2019-01-03 00:12:59,672Z lrauvNc4ToNetcdf.py nudge_coords():577 end_sec_diff (0.345324993) < max_sec_diff_at_end (10)
INFO 2019-01-03 00:12:59,673Z lrauvNc4ToNetcdf.py nudge_coords():589   25:        0.345    0.0106948    0.0108774     13999   93.33          15.47          21.60
WARNING 2019-01-03 00:12:59,679Z lrauvNc4ToNetcdf.py nudge_coords():577 end_sec_diff (0.360999107) < max_sec_diff_at_end (10)
INFO 2019-01-03 00:12:59,680Z lrauvNc4ToNetcdf.py nudge_coords():589   26:        0.361    0.0001243    0.0003023       786    5.36           7.49          10.45
WARNING 2019-01-03 00:12:59,684Z lrauvNc4ToNetcdf.py nudge_coords():577 end_sec_diff (0.322196961) < max_sec_diff_at_end (10)
INFO 2019-01-03 00:12:59,685Z lrauvNc4ToNetcdf.py nudge_coords():589   27:        0.322    0.0008492    0.0003190      1148    8.04           5.27           7.36
WARNING 2019-01-03 00:12:59,690Z lrauvNc4ToNetcdf.py nudge_coords():577 end_sec_diff (0.323910951) < max_sec_diff_at_end (10)
INFO 2019-01-03 00:12:59,691Z lrauvNc4ToNetcdf.py nudge_coords():589   28:        0.324    0.0022930    0.0031985      4925   32.84          12.83          18.05
WARNING 2019-01-03 00:12:59,696Z lrauvNc4ToNetcdf.py nudge_coords():577 end_sec_diff (0.347373009) < max_sec_diff_at_end (10)
INFO 2019-01-03 00:12:59,697Z lrauvNc4ToNetcdf.py nudge_coords():589   29:        0.347    0.0002728    0.0001515       523    3.73           5.35           7.53
WARNING 2019-01-03 00:12:59,701Z lrauvNc4ToNetcdf.py nudge_coords():577 end_sec_diff (0.361709118) < max_sec_diff_at_end (10)
INFO 2019-01-03 00:12:59,702Z lrauvNc4ToNetcdf.py nudge_coords():589   30:        0.362    0.0040920    0.0035910      6113   40.88          11.55          16.28
WARNING 2019-01-03 00:12:59,708Z lrauvNc4ToNetcdf.py nudge_coords():577 end_sec_diff (0.365895033) < max_sec_diff_at_end (10)
INFO 2019-01-03 00:12:59,709Z lrauvNc4ToNetcdf.py nudge_coords():589   31:        0.366    0.0035822    0.0021040      5443   36.29           7.62          10.74
WARNING 2019-01-03 00:12:59,714Z lrauvNc4ToNetcdf.py nudge_coords():577 end_sec_diff (0.337532997) < max_sec_diff_at_end (10)
INFO 2019-01-03 00:12:59,715Z lrauvNc4ToNetcdf.py nudge_coords():589   32:        0.338    0.0002417    0.0000388       421    3.02           1.69           2.39
WARNING 2019-01-03 00:12:59,720Z lrauvNc4ToNetcdf.py nudge_coords():577 end_sec_diff (0.367309093) < max_sec_diff_at_end (10)
INFO 2019-01-03 00:12:59,721Z lrauvNc4ToNetcdf.py nudge_coords():589   33:        0.367    0.0015120    0.0017748      5010   33.41           6.98           9.84
WARNING 2019-01-03 00:12:59,726Z lrauvNc4ToNetcdf.py nudge_coords():577 end_sec_diff (0.353616952) < max_sec_diff_at_end (10)
INFO 2019-01-03 00:12:59,727Z lrauvNc4ToNetcdf.py nudge_coords():589   34:        0.354    0.0001645   -0.0000885       643    4.38          -2.66          -3.75
WARNING 2019-01-03 00:12:59,731Z lrauvNc4ToNetcdf.py nudge_coords():577 end_sec_diff (0.301803112) < max_sec_diff_at_end (10)
INFO 2019-01-03 00:12:59,733Z lrauvNc4ToNetcdf.py nudge_coords():589   35:        0.302    0.0000242   -0.0000665       456    3.28          -2.67          -3.76
INFO 2019-01-03 00:12:59,737Z lrauvNc4ToNetcdf.py nudge_coords():613   37:            -            -            -      5103   34.02              -              -
INFO 2019-01-03 00:12:59,738Z lrauvNc4ToNetcdf.py nudge_coords():617 Points in final series = 178575
INFO 2019-01-03 00:12:59,785Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():490 http://odss.mbari.org/trackingdb/position/makai_ac/between/20161217T231516/20161218T211520/data.csv
INFO 2019-01-03 00:12:59,829Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():513 Found 0 position values from the Tracking database
INFO 2019-01-03 00:12:59,843Z lrauvNc4ToNetcdf.py processResampleNc4File():1005 ['fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources', 'pose_longitude_DeadReckonUsingMultipleVelocitySources', 'pose_latitude_DeadReckonUsingMultipleVelocitySources', 'pose_depth_DeadReckonUsingMultipleVelocitySources', 'fix_residual_percent_distance_traveled_DeadReckonUsingSpeedCalculator', 'pose_longitude_DeadReckonUsingSpeedCalculator', 'pose_latitude_DeadReckonUsingSpeedCalculator', 'pose_depth_DeadReckonUsingSpeedCalculator', 'oxygen', 'salinity', 'temperature', 'PAR', 'chlorophyll', 'bbp470', 'bbp650', 'health_platform_battery_charge', 'health_platform_average_voltage', 'fix_time', 'fix_latitude', 'fix_longitude', 'health_platform_average_current', 'control_inputs_buoyancy_position', 'control_inputs_elevator_angle', 'control_inputs_mass_position', 'control_inputs_rudder_angle', 'control_inputs_propeller_rotation_rate', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time']
INFO 2019-01-03 00:13:00,365Z lrauvNc4ToNetcdf.py processResampleNc4File():1008 Wrote /mbari/LRAUV/makai/missionlogs/2016/20161214_20161219/20161218T001506/201612180015_201612182015_2S_scieng.nc