INFO 2019-01-02 23:16:41,338Z lrauvNc4ToNetcdf.py processResampleNc4File():879 Reading /mbari/LRAUV/makai/missionlogs/2016/20160830_20160907/20160901T184844/201609011848_201609011939.nc4 file...
INFO 2019-01-02 23:16:44,366Z lrauvNc4ToNetcdf.py processResampleNc4File():922 Variable fix_residual_percent_distance_traveled empty so skipping
INFO 2019-01-02 23:16:44,500Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group DeadReckonUsingMultipleVelocitySources parameter longitude renaming to pose_longitude_DeadReckonUsingMultipleVelocitySources
INFO 2019-01-02 23:16:44,662Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group DeadReckonUsingMultipleVelocitySources parameter latitude renaming to pose_latitude_DeadReckonUsingMultipleVelocitySources
INFO 2019-01-02 23:16:44,788Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group DeadReckonUsingMultipleVelocitySources parameter depth renaming to pose_depth_DeadReckonUsingMultipleVelocitySources
INFO 2019-01-02 23:16:44,789Z lrauvNc4ToNetcdf.py processResampleNc4File():922 Variable fix_residual_percent_distance_traveled empty so skipping
INFO 2019-01-02 23:16:44,934Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group DeadReckonUsingSpeedCalculator parameter longitude renaming to pose_longitude_DeadReckonUsingSpeedCalculator
INFO 2019-01-02 23:16:45,060Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group DeadReckonUsingSpeedCalculator parameter latitude renaming to pose_latitude_DeadReckonUsingSpeedCalculator
INFO 2019-01-02 23:16:45,168Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group DeadReckonUsingSpeedCalculator parameter depth renaming to pose_depth_DeadReckonUsingSpeedCalculator
INFO 2019-01-02 23:16:45,204Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group Aanderaa_O2 parameter mass_concentration_of_oxygen_in_sea_water renaming to oxygen
INFO 2019-01-02 23:16:45,205Z lrauvNc4ToNetcdf.py processResampleNc4File():922 Variable sea_water_salinity empty so skipping
INFO 2019-01-02 23:16:45,207Z lrauvNc4ToNetcdf.py processResampleNc4File():922 Variable sea_water_temperature empty so skipping
WARNING 2019-01-02 23:16:45,207Z lrauvNc4ToNetcdf.py processResampleNc4File():961 'mole_concentration_of_nitrate_in_sea_water' not in /mbari/LRAUV/makai/missionlogs/2016/20160830_20160907/20160901T184844/201609011848_201609011939.nc4
INFO 2019-01-02 23:16:45,330Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group PAR_Licor parameter downwelling_photosynthetic_photon_flux_in_sea_water renaming to PAR
INFO 2019-01-02 23:16:45,416Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group WetLabsBB2FL parameter mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll
INFO 2019-01-02 23:16:45,436Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group WetLabsBB2FL parameter Output470 renaming to bbp470
INFO 2019-01-02 23:16:45,457Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group WetLabsBB2FL parameter Output650 renaming to bbp650
INFO 2019-01-02 23:16:45,512Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group BPC1 parameter platform_battery_charge renaming to health_platform_battery_charge
INFO 2019-01-02 23:16:45,574Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group BPC1 parameter platform_battery_voltage renaming to health_platform_average_voltage
INFO 2019-01-02 23:16:45,580Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group NAL9602 parameter time_fix renaming to fix_time
INFO 2019-01-02 23:16:45,585Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude
INFO 2019-01-02 23:16:45,589Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude
INFO 2019-01-02 23:16:45,619Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group Onboard parameter platform_average_current renaming to health_platform_average_current
INFO 2019-01-02 23:16:45,646Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position
INFO 2019-01-02 23:16:45,654Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle
INFO 2019-01-02 23:16:45,677Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position
INFO 2019-01-02 23:16:45,695Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle
INFO 2019-01-02 23:16:45,700Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate
INFO 2019-01-02 23:16:45,849Z lrauvNc4ToNetcdf.py createNav():449 platform_pitch_angle -> pitch: {'units': 'n/a', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'}
INFO 2019-01-02 23:16:46,022Z lrauvNc4ToNetcdf.py createNav():449 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'}
INFO 2019-01-02 23:16:46,170Z lrauvNc4ToNetcdf.py createNav():449 platform_orientation -> yaw: {'units': 'n/a', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'}
INFO 2019-01-02 23:16:46,171Z lrauvNc4ToNetcdf.py nudge_coords():544 /mbari/LRAUV/makai/missionlogs/2016/20160830_20160907/20160901T184844/201609011848_201609011939.nc4
INFO 2019-01-02 23:16:46,519Z lrauvNc4ToNetcdf.py nudge_coords():552 seg#  end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s)
INFO 2019-01-02 23:16:46,521Z lrauvNc4ToNetcdf.py nudge_coords():568                  -            -            -         0    0.00              -              -
WARNING 2019-01-02 23:16:46,522Z lrauvNc4ToNetcdf.py nudge_coords():577 end_sec_diff (0.260412931) < max_sec_diff_at_end (10)
INFO 2019-01-02 23:16:46,523Z lrauvNc4ToNetcdf.py nudge_coords():589    0:        0.260    0.0000863    0.0000506         8    0.31          20.66          30.46
WARNING 2019-01-02 23:16:46,526Z lrauvNc4ToNetcdf.py nudge_coords():577 end_sec_diff (0.33291316) < max_sec_diff_at_end (10)
INFO 2019-01-02 23:16:46,527Z lrauvNc4ToNetcdf.py nudge_coords():589    1:        0.333   -0.0005572   -0.0004066       833    7.19          -7.09         -10.47
WARNING 2019-01-02 23:16:46,530Z lrauvNc4ToNetcdf.py nudge_coords():577 end_sec_diff (0.304999113) < max_sec_diff_at_end (10)
INFO 2019-01-02 23:16:46,531Z lrauvNc4ToNetcdf.py nudge_coords():589    2:        0.305    0.0011972    0.0001609       989    7.94           2.54           3.75
WARNING 2019-01-02 23:16:46,534Z lrauvNc4ToNetcdf.py nudge_coords():577 end_sec_diff (0.308192015) < max_sec_diff_at_end (10)
INFO 2019-01-02 23:16:46,534Z lrauvNc4ToNetcdf.py nudge_coords():589    3:        0.308    0.0003413   -0.0005264       779    7.47          -8.82         -13.05
WARNING 2019-01-02 23:16:46,537Z lrauvNc4ToNetcdf.py nudge_coords():577 end_sec_diff (0.306277036) < max_sec_diff_at_end (10)
INFO 2019-01-02 23:16:46,538Z lrauvNc4ToNetcdf.py nudge_coords():589    4:        0.306    0.0000163   -0.0001802       662    6.98          -3.23          -4.79
WARNING 2019-01-02 23:16:46,541Z lrauvNc4ToNetcdf.py nudge_coords():577 end_sec_diff (0.288349867) < max_sec_diff_at_end (10)
INFO 2019-01-02 23:16:46,542Z lrauvNc4ToNetcdf.py nudge_coords():589    5:        0.288    0.0000281   -0.0005382       942   11.55          -5.82          -8.64
INFO 2019-01-02 23:16:46,545Z lrauvNc4ToNetcdf.py nudge_coords():613    7:            -            -            -       504    5.18              -              -
INFO 2019-01-02 23:16:46,545Z lrauvNc4ToNetcdf.py nudge_coords():617 Points in final series = 4717
INFO 2019-01-02 23:16:46,586Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():490 http://odss.mbari.org/trackingdb/position/makai_ac/between/20160901T174856/20160901T203940/data.csv
INFO 2019-01-02 23:16:46,608Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():513 Found 0 position values from the Tracking database
INFO 2019-01-02 23:16:46,611Z lrauvNc4ToNetcdf.py processResampleNc4File():1005 ['pose_longitude_DeadReckonUsingMultipleVelocitySources', 'pose_latitude_DeadReckonUsingMultipleVelocitySources', 'pose_depth_DeadReckonUsingMultipleVelocitySources', 'pose_longitude_DeadReckonUsingSpeedCalculator', 'pose_latitude_DeadReckonUsingSpeedCalculator', 'pose_depth_DeadReckonUsingSpeedCalculator', 'oxygen', 'PAR', 'chlorophyll', 'bbp470', 'bbp650', 'health_platform_battery_charge', 'health_platform_average_voltage', 'fix_time', 'fix_latitude', 'fix_longitude', 'health_platform_average_current', 'control_inputs_buoyancy_position', 'control_inputs_elevator_angle', 'control_inputs_mass_position', 'control_inputs_rudder_angle', 'control_inputs_propeller_rotation_rate', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time']
INFO 2019-01-02 23:16:47,055Z lrauvNc4ToNetcdf.py processResampleNc4File():1008 Wrote /mbari/LRAUV/makai/missionlogs/2016/20160830_20160907/20160901T184844/201609011848_201609011939_2S_scieng.nc