2021-02-05T17:45:47.628Z,1612547147.628 [Supervisor](DEBUG): Initializing supervisor.
2021-02-05T17:45:47.631Z,1612547147.631 [SyncHandler](DEBUG): Created PCaller Thread at 404514E0
2021-02-05T17:45:47.631Z,1612547147.631 [SyncHandler](INFO): Protected caller Thread ID is 1940
2021-02-05T17:45:47.632Z,1612547147.632 [ComponentRegistry](DEBUG): Component "controlThread" handled in its own thread.
2021-02-05T17:45:47.633Z,1612547147.633 [controlThread ThreadHandler](DEBUG): Created PCaller Thread at 404814E0
2021-02-05T17:45:47.633Z,1612547147.633 [controlThread ThreadHandler](INFO): Protected caller Thread ID is 1941
2021-02-05T17:45:47.636Z,1612547147.636 [ComponentRegistry](DEBUG): SyncComponent "CycleStarter" handled in the control thread.
2021-02-05T17:45:47.652Z,1612547147.652 [ComponentRegistry](DEBUG): Component "CommandLine" handled in its own thread.
2021-02-05T17:45:47.653Z,1612547147.653 [CommandLine ThreadHandler](DEBUG): Created PCaller Thread at 404B14E0
2021-02-05T17:45:47.654Z,1612547147.654 [CommandLine ThreadHandler](INFO): Protected caller Thread ID is 1942
2021-02-05T17:45:47.654Z,1612547147.654 [ComponentRegistry](DEBUG): Component "logger" handled in its own thread.
2021-02-05T17:45:47.655Z,1612547147.655 [logger ThreadHandler](DEBUG): Created PCaller Thread at 404E14E0
2021-02-05T17:45:47.656Z,1612547147.656 [logger ThreadHandler](INFO): Protected caller Thread ID is 1943
2021-02-05T17:45:47.658Z,1612547147.658 [ComponentRegistry](DEBUG): SyncComponent "LogSplitter" handled in the control thread.
2021-02-05T17:45:47.658Z,1612547147.658 [Supervisor](INFO): Looking for Config files in directory: Config/
2021-02-05T17:45:47.660Z,1612547147.660 [Supervisor](INFO): Opening Config file at: Config/Navigation.cfg
2021-02-05T17:45:47.852Z,1612547147.852 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Navigation
2021-02-05T17:45:47.853Z,1612547147.853 [Supervisor](INFO): Opening Config file at: Config/Guidance.cfg
2021-02-05T17:45:47.930Z,1612547147.930 [Supervisor](INFO): Opening Config file at: Config/Simulator.cfg
2021-02-05T17:45:48.391Z,1612547148.391 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Simulator
2021-02-05T17:45:48.391Z,1612547148.391 [Supervisor](INFO): Opening Config file at: Config/Control.cfg
2021-02-05T17:45:48.691Z,1612547148.691 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Control
2021-02-05T17:45:48.691Z,1612547148.691 [Supervisor](INFO): Opening Config file at: Config/secure.cfg
2021-02-05T17:45:48.784Z,1612547148.784 [ComponentRegistry](DEBUG): Loaded Config Component "Config/secure
2021-02-05T17:45:48.785Z,1612547148.785 [Supervisor](INFO): Opening Config file at: Config/Servo.cfg
2021-02-05T17:45:49.070Z,1612547149.070 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Servo
2021-02-05T17:45:49.070Z,1612547149.070 [Supervisor](INFO): Opening Config file at: Config/BIT.cfg
2021-02-05T17:45:49.254Z,1612547149.254 [ComponentRegistry](DEBUG): Loaded Config Component "Config/BIT
2021-02-05T17:45:49.254Z,1612547149.254 [Supervisor](INFO): Opening Config file at: Config/vehicle.cfg
2021-02-05T17:45:49.714Z,1612547149.714 [ComponentRegistry](DEBUG): Loaded Config Component "Config/vehicle
2021-02-05T17:45:49.715Z,1612547149.715 [Supervisor](INFO): Opening Config file at: Config/workSite.cfg
2021-02-05T17:45:49.818Z,1612547149.818 [ComponentRegistry](DEBUG): Loaded Config Component "Config/workSite
2021-02-05T17:45:49.818Z,1612547149.818 [Supervisor](INFO): Opening Config file at: Config/Sample.cfg
2021-02-05T17:45:49.915Z,1612547149.915 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Sample
2021-02-05T17:45:49.916Z,1612547149.916 [Supervisor](INFO): Opening Config file at: Config/Sensor.cfg
2021-02-05T17:45:50.610Z,1612547150.610 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Sensor
2021-02-05T17:45:50.610Z,1612547150.610 [Supervisor](INFO): Opening Config file at: Config/Science.cfg
2021-02-05T17:45:51.016Z,1612547151.016 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Science
2021-02-05T17:45:51.016Z,1612547151.016 [Supervisor](INFO): Opening Config file at: Config/logger.cfg
2021-02-05T17:45:51.196Z,1612547151.196 [ComponentRegistry](DEBUG): Loaded Config Component "Config/logger
2021-02-05T17:45:51.196Z,1612547151.196 [Supervisor](INFO): Opening Config file at: Config/Estimation.cfg
2021-02-05T17:45:51.334Z,1612547151.334 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Estimation
2021-02-05T17:45:51.335Z,1612547151.335 [Supervisor](INFO): Opening Config file at: Config/Derivation.cfg
2021-02-05T17:45:51.477Z,1612547151.477 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Derivation
2021-02-05T17:45:51.478Z,1612547151.478 [Supervisor](INFO): Opening Config file at: Config/Dock.cfg
2021-02-05T17:45:51.679Z,1612547151.679 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Dock
2021-02-05T17:45:51.681Z,1612547151.681 [Supervisor](INFO): Looking for Config files in directory: Config/lrauv-daphne/
2021-02-05T17:45:51.682Z,1612547151.682 [Supervisor](INFO): Opening Config file at: Config/lrauv-daphne/Navigation.cfg
2021-02-05T17:45:51.769Z,1612547151.769 [Supervisor](INFO): Opening Config file at: Config/lrauv-daphne/Simulator.cfg
2021-02-05T17:45:51.852Z,1612547151.852 [Supervisor](INFO): Opening Config file at: Config/lrauv-daphne/Control.cfg
2021-02-05T17:45:51.948Z,1612547151.948 [Supervisor](INFO): Opening Config file at: Config/lrauv-daphne/secure.cfg
2021-02-05T17:45:52.029Z,1612547152.029 [Supervisor](INFO): Opening Config file at: Config/lrauv-daphne/Servo.cfg
2021-02-05T17:45:52.120Z,1612547152.120 [Supervisor](INFO): Opening Config file at: Config/lrauv-daphne/BIT.cfg
2021-02-05T17:45:52.217Z,1612547152.217 [Supervisor](INFO): Opening Config file at: Config/lrauv-daphne/vehicle.cfg
2021-02-05T17:45:52.454Z,1612547152.454 [Supervisor](INFO): Opening Config file at: Config/lrauv-daphne/workSite.cfg
2021-02-05T17:45:52.625Z,1612547152.625 [Supervisor](INFO): Opening Config file at: Config/lrauv-daphne/Sensor.cfg
2021-02-05T17:45:52.980Z,1612547152.980 [Supervisor](INFO): Opening Config file at: Config/lrauv-daphne/Science.cfg
2021-02-05T17:45:53.324Z,1612547153.324 [Supervisor](INFO): Opening Config file at: Config/lrauv-daphne/logger.cfg
2021-02-05T17:45:53.493Z,1612547153.493 [Supervisor](INFO): Opening Config file at: Config/lrauv-daphne/Battery.cfg
2021-02-05T17:45:53.736Z,1612547153.736 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Battery
2021-02-05T17:45:53.738Z,1612547153.738 [Supervisor](INFO): Looking for Config files in directory: Config/lrauv-daphne/root/
2021-02-05T17:45:53.738Z,1612547153.738 [Supervisor](IMPORTANT): Reading configuration overrides from Data/persisted.cfg
2021-02-05T17:45:53.747Z,1612547153.747 [Module Loader](DEBUG): Loading Module at Modules/Control.so
2021-02-05T17:45:53.795Z,1612547153.795 [VerticalControl](DEBUG): Construct VerticalControl.
2021-02-05T17:45:53.853Z,1612547153.853 [VerticalControl] Loaded
2021-02-05T17:45:53.853Z,1612547153.853 [ComponentRegistry](DEBUG): SyncComponent "VerticalControl" handled in the control thread.
2021-02-05T17:45:53.853Z,1612547153.853 [HorizontalControl](DEBUG): Construct HorizontalControl.
2021-02-05T17:45:53.889Z,1612547153.889 [HorizontalControl] Loaded
2021-02-05T17:45:53.890Z,1612547153.890 [ComponentRegistry](DEBUG): SyncComponent "HorizontalControl" handled in the control thread.
2021-02-05T17:45:53.890Z,1612547153.890 [SpeedControl](DEBUG): Construct SpeedControl.
2021-02-05T17:45:53.893Z,1612547153.893 [SpeedControl] Loaded
2021-02-05T17:45:53.894Z,1612547153.894 [ComponentRegistry](DEBUG): SyncComponent "SpeedControl" handled in the control thread.
2021-02-05T17:45:53.894Z,1612547153.894 [LoopControl](DEBUG): Construct LoopControl.
2021-02-05T17:45:53.895Z,1612547153.895 [LoopControl] Loaded
2021-02-05T17:45:53.895Z,1612547153.895 [ComponentRegistry](DEBUG): SyncComponent "LoopControl" handled in the control thread.
2021-02-05T17:45:53.895Z,1612547153.895 [Module Loader](DEBUG): Loaded Module: Control (Contains the Control components, such as Depth, Heading, and Speed Control)
2021-02-05T17:45:53.896Z,1612547153.896 [Module Loader](DEBUG): Loading Module at Modules/Sample.so
2021-02-05T17:45:53.914Z,1612547153.914 [Module Loader](DEBUG): Loaded Module: Sample (This is a Sample Module of Sample Components)
2021-02-05T17:45:53.914Z,1612547153.914 [Module Loader](DEBUG): Loading Module at Modules/Simulator.so
2021-02-05T17:45:54.007Z,1612547154.007 [Module Loader](DEBUG): Loaded Module: Simulator (This is the module containing the Simulator)
2021-02-05T17:45:54.008Z,1612547154.008 [Module Loader](DEBUG): Loading Module at Modules/Servo.so
2021-02-05T17:45:54.112Z,1612547154.112 [BuoyancyServo] Loaded
2021-02-05T17:45:54.113Z,1612547154.113 [ComponentRegistry](DEBUG): SyncComponent "BuoyancyServo" handled in the control thread.
2021-02-05T17:45:54.128Z,1612547154.128 [ElevatorServo] Loaded
2021-02-05T17:45:54.129Z,1612547154.129 [ComponentRegistry](DEBUG): SyncComponent "ElevatorServo" handled in the control thread.
2021-02-05T17:45:54.143Z,1612547154.143 [MassServo] Loaded
2021-02-05T17:45:54.144Z,1612547154.144 [ComponentRegistry](DEBUG): SyncComponent "MassServo" handled in the control thread.
2021-02-05T17:45:54.158Z,1612547154.158 [RudderServo] Loaded
2021-02-05T17:45:54.158Z,1612547154.158 [ComponentRegistry](DEBUG): SyncComponent "RudderServo" handled in the control thread.
2021-02-05T17:45:54.173Z,1612547154.173 [ThrusterServo] Loaded
2021-02-05T17:45:54.173Z,1612547154.173 [ComponentRegistry](DEBUG): SyncComponent "ThrusterServo" handled in the control thread.
2021-02-05T17:45:54.174Z,1612547154.174 [Module Loader](DEBUG): Loaded Module: Servo (This is the module containing motor controllers)
2021-02-05T17:45:54.174Z,1612547154.174 [Module Loader](DEBUG): Loading Module at Modules/Navigation.so
2021-02-05T17:45:54.251Z,1612547154.251 [DeadReckonUsingMultipleVelocitySources] Loaded
2021-02-05T17:45:54.251Z,1612547154.251 [ComponentRegistry](DEBUG): SyncComponent "DeadReckonUsingMultipleVelocitySources" handled in the control thread.
2021-02-05T17:45:54.261Z,1612547154.261 [NavChart] Loaded
2021-02-05T17:45:54.262Z,1612547154.262 [ComponentRegistry](DEBUG): SyncComponent "NavChart" handled in the control thread.
2021-02-05T17:45:54.265Z,1612547154.265 [UniversalFixResidualReporter] Loaded
2021-02-05T17:45:54.266Z,1612547154.266 [ComponentRegistry](DEBUG): SyncComponent "UniversalFixResidualReporter" handled in the control thread.
2021-02-05T17:45:54.266Z,1612547154.266 [Module Loader](DEBUG): Loaded Module: Navigation (Contains the base navigation components)
2021-02-05T17:45:54.266Z,1612547154.266 [Module Loader](DEBUG): Loading Module at Modules/Estimation.so
2021-02-05T17:45:54.348Z,1612547154.348 [Module Loader](DEBUG): Loaded Module: Estimation (Contains the base estimation components)
2021-02-05T17:45:54.349Z,1612547154.349 [Module Loader](DEBUG): Loading Module at Modules/Sensor.so
2021-02-05T17:45:54.639Z,1612547154.639 [AHRS_M2](DEBUG): LcmSlateWriter::add(): platform_orientation
2021-02-05T17:45:54.642Z,1612547154.642 [AHRS_M2](INFO): created writer for : platform_orientation
2021-02-05T17:45:54.644Z,1612547154.644 [AHRS_M2](DEBUG): LcmSlateWriter::add(): platform_magnetic_orientation
2021-02-05T17:45:54.647Z,1612547154.647 [AHRS_M2](INFO): created writer for : platform_magnetic_orientation
2021-02-05T17:45:54.647Z,1612547154.647 [AHRS_M2](DEBUG): LcmSlateWriter::add(): platform_pitch_angle
2021-02-05T17:45:54.650Z,1612547154.650 [AHRS_M2](INFO): created writer for : platform_pitch_angle
2021-02-05T17:45:54.650Z,1612547154.650 [AHRS_M2](DEBUG): LcmSlateWriter::add(): platform_roll_angle
2021-02-05T17:45:54.653Z,1612547154.653 [AHRS_M2](INFO): created writer for : platform_roll_angle
2021-02-05T17:45:54.689Z,1612547154.689 [AHRS_M2] Loaded
2021-02-05T17:45:54.689Z,1612547154.689 [ComponentRegistry](DEBUG): SyncComponent "AHRS_M2" handled in the control thread.
2021-02-05T17:45:54.761Z,1612547154.761 [DataOverHttps] Loaded
2021-02-05T17:45:54.762Z,1612547154.762 [ComponentRegistry](DEBUG): Component "DataOverHttps" handled in its own thread.
2021-02-05T17:45:54.763Z,1612547154.763 [DataOverHttps ThreadHandler](DEBUG): Created PCaller Thread at 408A34E0
2021-02-05T17:45:54.763Z,1612547154.763 [DataOverHttps ThreadHandler](INFO): Protected caller Thread ID is 2030
2021-02-05T17:45:54.779Z,1612547154.779 [Depth_Keller] Loaded
2021-02-05T17:45:54.779Z,1612547154.779 [ComponentRegistry](DEBUG): SyncComponent "Depth_Keller" handled in the control thread.
2021-02-05T17:45:54.832Z,1612547154.832 [NAL9602] Loaded
2021-02-05T17:45:54.832Z,1612547154.832 [ComponentRegistry](DEBUG): SyncComponent "NAL9602" handled in the control thread.
2021-02-05T17:45:54.857Z,1612547154.857 [Onboard] Loaded
2021-02-05T17:45:54.857Z,1612547154.857 [ComponentRegistry](DEBUG): Component "Onboard" handled in its own thread.
2021-02-05T17:45:54.858Z,1612547154.858 [Onboard ThreadHandler](DEBUG): Created PCaller Thread at 408D34E0
2021-02-05T17:45:54.858Z,1612547154.858 [Onboard ThreadHandler](INFO): Protected caller Thread ID is 2031
2021-02-05T17:45:54.868Z,1612547154.868 [Radio_Surface] Loaded
2021-02-05T17:45:54.869Z,1612547154.869 [ComponentRegistry](DEBUG): Component "Radio_Surface" handled in its own thread.
2021-02-05T17:45:54.870Z,1612547154.870 [Radio_Surface ThreadHandler](DEBUG): Created PCaller Thread at 409034E0
2021-02-05T17:45:54.870Z,1612547154.870 [Radio_Surface ThreadHandler](INFO): Protected caller Thread ID is 2032
2021-02-05T17:45:55.627Z,1612547155.627 [BPC1] Loaded
2021-02-05T17:45:55.628Z,1612547155.628 [ComponentRegistry](DEBUG): SyncComponent "BPC1" handled in the control thread.
2021-02-05T17:45:55.646Z,1612547155.646 [AMEcho] Loaded
2021-02-05T17:45:55.646Z,1612547155.646 [ComponentRegistry](DEBUG): SyncComponent "AMEcho" handled in the control thread.
2021-02-05T17:45:55.646Z,1612547155.646 [Module Loader](DEBUG): Loaded Module: Sensor (Contains the sensor components)
2021-02-05T17:45:55.647Z,1612547155.647 [Module Loader](DEBUG): Loading Module at Modules/Derivation.so
2021-02-05T17:45:55.684Z,1612547155.684 [DepthRateCalculator] Loaded
2021-02-05T17:45:55.684Z,1612547155.684 [ComponentRegistry](DEBUG): SyncComponent "DepthRateCalculator" handled in the control thread.
2021-02-05T17:45:55.687Z,1612547155.687 [PitchRateCalculator] Loaded
2021-02-05T17:45:55.687Z,1612547155.687 [ComponentRegistry](DEBUG): SyncComponent "PitchRateCalculator" handled in the control thread.
2021-02-05T17:45:55.694Z,1612547155.694 [SpeedCalculator] Loaded
2021-02-05T17:45:55.694Z,1612547155.694 [ComponentRegistry](DEBUG): SyncComponent "SpeedCalculator" handled in the control thread.
2021-02-05T17:45:55.705Z,1612547155.705 [TempGradientCalculator] Loaded
2021-02-05T17:45:55.705Z,1612547155.705 [ComponentRegistry](DEBUG): SyncComponent "TempGradientCalculator" handled in the control thread.
2021-02-05T17:45:55.708Z,1612547155.708 [YawRateCalculator] Loaded
2021-02-05T17:45:55.708Z,1612547155.708 [ComponentRegistry](DEBUG): SyncComponent "YawRateCalculator" handled in the control thread.
2021-02-05T17:45:55.722Z,1612547155.722 [ElevatorOffsetCalculator] Loaded
2021-02-05T17:45:55.723Z,1612547155.723 [ComponentRegistry](DEBUG): SyncComponent "ElevatorOffsetCalculator" handled in the control thread.
2021-02-05T17:45:55.723Z,1612547155.723 [Module Loader](DEBUG): Loaded Module: Derivation (Contains the base derivation components)
2021-02-05T17:45:55.724Z,1612547155.724 [Module Loader](DEBUG): Loading Module at Modules/Science.so
2021-02-05T17:45:55.913Z,1612547155.913 [CANONSampler] Loaded
2021-02-05T17:45:55.913Z,1612547155.913 [ComponentRegistry](DEBUG): SyncComponent "CANONSampler" handled in the control thread.
2021-02-05T17:45:55.931Z,1612547155.931 [CTD_Seabird](DEBUG): LcmSlateWriter::add(): sea_water_density
2021-02-05T17:45:55.934Z,1612547155.934 [CTD_Seabird](INFO): created writer for : sea_water_density
2021-02-05T17:45:55.934Z,1612547155.934 [CTD_Seabird](DEBUG): LcmSlateWriter::add(): depth
2021-02-05T17:45:55.937Z,1612547155.937 [CTD_Seabird](INFO): created writer for : depth
2021-02-05T17:45:55.937Z,1612547155.937 [CTD_Seabird](DEBUG): LcmSlateWriter::add(): sea_water_pressure
2021-02-05T17:45:55.940Z,1612547155.940 [CTD_Seabird](INFO): created writer for : sea_water_pressure
2021-02-05T17:45:55.940Z,1612547155.940 [CTD_Seabird](DEBUG): LcmSlateWriter::add(): sea_water_salinity
2021-02-05T17:45:55.943Z,1612547155.943 [CTD_Seabird](INFO): created writer for : sea_water_salinity
2021-02-05T17:45:55.943Z,1612547155.943 [CTD_Seabird](DEBUG): LcmSlateWriter::add(): sea_water_temperature
2021-02-05T17:45:55.946Z,1612547155.946 [CTD_Seabird](INFO): created writer for : sea_water_temperature
2021-02-05T17:45:55.947Z,1612547155.947 [CTD_Seabird](DEBUG): LcmSlateWriter::add(): sea_water_electrical_conductivity
2021-02-05T17:45:55.950Z,1612547155.950 [CTD_Seabird](INFO): created writer for : sea_water_electrical_conductivity
2021-02-05T17:45:55.950Z,1612547155.950 [CTD_Seabird](DEBUG): LcmSlateWriter::add(): speed_of_sound_in_sea_water
2021-02-05T17:45:55.953Z,1612547155.953 [CTD_Seabird](INFO): created writer for : speed_of_sound_in_sea_water
2021-02-05T17:45:55.953Z,1612547155.953 [CTD_Seabird](DEBUG): LcmSlateWriter::add(): mass_concentration_of_oxygen_in_sea_water
2021-02-05T17:45:55.956Z,1612547155.956 [CTD_Seabird](INFO): created writer for : mass_concentration_of_oxygen_in_sea_water
2021-02-05T17:45:55.957Z,1612547155.957 [CTD_Seabird](DEBUG): LcmSlateWriter::add(DAtaURI): CTD_Seabird.sea_water_dissolved_oxygen_freq
2021-02-05T17:45:55.957Z,1612547155.957 [CTD_Seabird](DEBUG): LcmSlateWriter::add(): dataName: sea_water_dissolved_oxygen_freq
2021-02-05T17:45:55.973Z,1612547155.973 [CTD_Seabird] Loaded
2021-02-05T17:45:55.973Z,1612547155.973 [ComponentRegistry](DEBUG): Component "CTD_Seabird" handled in its own thread.
2021-02-05T17:45:55.974Z,1612547155.974 [CTD_Seabird ThreadHandler](DEBUG): Created PCaller Thread at 40A114E0
2021-02-05T17:45:55.974Z,1612547155.974 [CTD_Seabird ThreadHandler](INFO): Protected caller Thread ID is 2033
2021-02-05T17:45:55.991Z,1612547155.991 [PAR_Licor] Loaded
2021-02-05T17:45:55.991Z,1612547155.991 [ComponentRegistry](DEBUG): SyncComponent "PAR_Licor" handled in the control thread.
2021-02-05T17:45:56.003Z,1612547156.003 [WetLabsBB2FL](DEBUG): LcmSlateWriter::add(DAtaURI): WetLabsBB2FL.Output470
2021-02-05T17:45:56.003Z,1612547156.003 [WetLabsBB2FL](DEBUG): LcmSlateWriter::add(): dataName: Output470
2021-02-05T17:45:56.005Z,1612547156.005 [WetLabsBB2FL](DEBUG): LcmSlateWriter::add(DAtaURI): WetLabsBB2FL.Output650
2021-02-05T17:45:56.005Z,1612547156.005 [WetLabsBB2FL](DEBUG): LcmSlateWriter::add(): dataName: Output650
2021-02-05T17:45:56.007Z,1612547156.007 [WetLabsBB2FL](DEBUG): LcmSlateWriter::add(DAtaURI): WetLabsBB2FL.OutputChl
2021-02-05T17:45:56.007Z,1612547156.007 [WetLabsBB2FL](DEBUG): LcmSlateWriter::add(): dataName: OutputChl
2021-02-05T17:45:56.009Z,1612547156.009 [WetLabsBB2FL](DEBUG): LcmSlateWriter::add(DAtaURI): WetLabsBB2FL.VolumeScatCoeff117deg470nm
2021-02-05T17:45:56.009Z,1612547156.009 [WetLabsBB2FL](DEBUG): LcmSlateWriter::add(): dataName: VolumeScatCoeff117deg470nm
2021-02-05T17:45:56.011Z,1612547156.011 [WetLabsBB2FL](DEBUG): LcmSlateWriter::add(DAtaURI): WetLabsBB2FL.VolumeScatCoeff117deg650nm
2021-02-05T17:45:56.011Z,1612547156.011 [WetLabsBB2FL](DEBUG): LcmSlateWriter::add(): dataName: VolumeScatCoeff117deg650nm
2021-02-05T17:45:56.014Z,1612547156.014 [WetLabsBB2FL](DEBUG): LcmSlateWriter::add(DAtaURI): WetLabsBB2FL.BackscatteringCoeff470nm
2021-02-05T17:45:56.014Z,1612547156.014 [WetLabsBB2FL](DEBUG): LcmSlateWriter::add(): dataName: BackscatteringCoeff470nm
2021-02-05T17:45:56.016Z,1612547156.016 [WetLabsBB2FL](DEBUG): LcmSlateWriter::add(DAtaURI): WetLabsBB2FL.BackscatteringCoeff650nm
2021-02-05T17:45:56.016Z,1612547156.016 [WetLabsBB2FL](DEBUG): LcmSlateWriter::add(): dataName: BackscatteringCoeff650nm
2021-02-05T17:45:56.017Z,1612547156.017 [WetLabsBB2FL](DEBUG): LcmSlateWriter::add(): mass_concentration_of_chlorophyll_in_sea_water
2021-02-05T17:45:56.020Z,1612547156.020 [WetLabsBB2FL](INFO): created writer for : mass_concentration_of_chlorophyll_in_sea_water
2021-02-05T17:45:56.020Z,1612547156.020 [WetLabsBB2FL](DEBUG): LcmSlateWriter::add(DAtaURI): WetLabsBB2FL.bin_median_mass_concentration_of_chlorophyll_in_sea_water
2021-02-05T17:45:56.020Z,1612547156.020 [WetLabsBB2FL](DEBUG): LcmSlateWriter::add(): dataName: bin_median_mass_concentration_of_chlorophyll_in_sea_water
2021-02-05T17:45:56.022Z,1612547156.022 [WetLabsBB2FL](DEBUG): LcmSlateWriter::add(DAtaURI): WetLabsBB2FL.bin_mean_mass_concentration_of_chlorophyll_in_sea_water
2021-02-05T17:45:56.022Z,1612547156.022 [WetLabsBB2FL](DEBUG): LcmSlateWriter::add(): dataName: bin_mean_mass_concentration_of_chlorophyll_in_sea_water
2021-02-05T17:45:56.024Z,1612547156.024 [WetLabsBB2FL](DEBUG): LcmSlateWriter::add(DAtaURI): WetLabsBB2FL.bin_variance_mass_concentration_of_chlorophyll_in_sea_water
2021-02-05T17:45:56.024Z,1612547156.024 [WetLabsBB2FL](DEBUG): LcmSlateWriter::add(): dataName: bin_variance_mass_concentration_of_chlorophyll_in_sea_water
2021-02-05T17:45:56.026Z,1612547156.026 [WetLabsBB2FL] Loaded
2021-02-05T17:45:56.026Z,1612547156.026 [ComponentRegistry](DEBUG): Component "WetLabsBB2FL" handled in its own thread.
2021-02-05T17:45:56.028Z,1612547156.028 [WetLabsBB2FL ThreadHandler](DEBUG): Created PCaller Thread at 40A414E0
2021-02-05T17:45:56.028Z,1612547156.028 [WetLabsBB2FL ThreadHandler](INFO): Protected caller Thread ID is 2034
2021-02-05T17:45:56.029Z,1612547156.029 [Module Loader](DEBUG): Loaded Module: Science (Contains the science components)
2021-02-05T17:45:56.029Z,1612547156.029 [Module Loader](DEBUG): Loading Module at Modules/Trigger.so
2021-02-05T17:45:56.055Z,1612547156.055 [Module Loader](DEBUG): Loaded Module: Trigger (Contains triggers for use in missions)
2021-02-05T17:45:56.056Z,1612547156.056 [Module Loader](DEBUG): Loading Module at Modules/Guidance.so
2021-02-05T17:45:56.335Z,1612547156.335 [Module Loader](DEBUG): Loaded Module: Guidance (Contains behaviors and commands)
2021-02-05T17:45:56.335Z,1612547156.335 [Module Loader](DEBUG): Loading Module at Modules/BIT.so
2021-02-05T17:45:56.463Z,1612547156.463 [SBIT](DEBUG): Construct Startup Built In Test.
2021-02-05T17:45:56.471Z,1612547156.471 [SBIT] Loaded
2021-02-05T17:45:56.471Z,1612547156.471 [ComponentRegistry](DEBUG): SyncComponent "SBIT" handled in the control thread.
2021-02-05T17:45:56.472Z,1612547156.472 [IBIT](DEBUG): Construct Initiated Built In Test.
2021-02-05T17:45:56.484Z,1612547156.484 [IBIT] Loaded
2021-02-05T17:45:56.484Z,1612547156.484 [ComponentRegistry](DEBUG): SyncComponent "IBIT" handled in the control thread.
2021-02-05T17:45:56.487Z,1612547156.487 [CBIT](DEBUG): Construct Continuous Built In Test.
2021-02-05T17:45:56.581Z,1612547156.581 [CBIT] Loaded
2021-02-05T17:45:56.581Z,1612547156.581 [ComponentRegistry](DEBUG): SyncComponent "CBIT" handled in the control thread.
2021-02-05T17:45:56.581Z,1612547156.581 [Module Loader](DEBUG): Loaded Module: BIT (Contains the BuiltInTest components, such as C Built In Test)
2021-02-05T17:45:56.582Z,1612547156.582 [Module Loader](DEBUG): Loading Module at Modules/Dock.so
2021-02-05T17:45:56.658Z,1612547156.658 [Module Loader](DEBUG): Loaded Module: Dock (Contains behaviors and commands for docking)
2021-02-05T17:45:56.662Z,1612547156.662 [ComponentRegistry](DEBUG): SyncComponent "MissionManager" handled in the control thread.
2021-02-05T17:45:56.663Z,1612547156.663 [ComponentRegistry](DEBUG): SyncComponent "Reporter" handled in the control thread.
2021-02-05T17:45:56.671Z,1612547156.671 [ComponentRegistry](DEBUG): Component "NavChartDb" handled in its own thread.
2021-02-05T17:45:56.672Z,1612547156.672 [NavChartDb ThreadHandler](DEBUG): Created PCaller Thread at 40B684E0
2021-02-05T17:45:56.672Z,1612547156.672 [NavChartDb ThreadHandler](INFO): Protected caller Thread ID is 2035
2021-02-05T17:45:56.677Z,1612547156.677 [Supervisor](INFO): Main Thread ID is 1939
2021-02-05T17:45:56.677Z,1612547156.677 [Supervisor](DEBUG): Running supervisor.
2021-02-05T17:45:56.677Z,1612547156.677 [CommandLine ThreadHandler](INFO): Handler Thread ID is 2036
2021-02-05T17:45:56.680Z,1612547156.680 [controlThread ThreadHandler](INFO): Handler Thread ID is 2037
2021-02-05T17:45:56.680Z,1612547156.680 [controlThread](DEBUG): Initializing ControlThread
2021-02-05T17:45:56.681Z,1612547156.681 [VerticalControl](DEBUG): Initialize VerticalControlComponent.
2021-02-05T17:45:56.683Z,1612547156.683 [HorizontalControl](DEBUG): Initialize HorizontalControlComponent.
2021-02-05T17:45:56.683Z,1612547156.683 [SpeedControl](DEBUG): Initialize SpeedControlComponent.
2021-02-05T17:45:56.684Z,1612547156.684 [LoopControl](DEBUG): Initialize LoopControlComponent.
2021-02-05T17:45:56.686Z,1612547156.686 [NavChart](DEBUG): Initialize NavChart Navigation.
2021-02-05T17:45:56.686Z,1612547156.686 [UniversalFixResidualReporter](DEBUG): Initializing UniversalFixResidualReporter component.
2021-02-05T17:45:56.688Z,1612547156.688 [DepthRateCalculator](DEBUG): Initializing DepthRateCalculator.
2021-02-05T17:45:56.689Z,1612547156.689 [PitchRateCalculator](DEBUG): Initializing PitchRateCalculator.
2021-02-05T17:45:56.689Z,1612547156.689 [SpeedCalculator](DEBUG): Initializing SpeedCalculator.
2021-02-05T17:45:56.689Z,1612547156.689 [TempGradientCalculator](DEBUG): Initializing TempGradientCalculator.
2021-02-05T17:45:56.690Z,1612547156.690 [YawRateCalculator](DEBUG): Initializing YawRateCalculator.
2021-02-05T17:45:56.690Z,1612547156.690 [ElevatorOffsetCalculator](DEBUG): Initializing ElevatorOffsetCalculator.
2021-02-05T17:45:56.692Z,1612547156.692 [SBIT](INFO): Initialize SBIT Component.
2021-02-05T17:45:56.692Z,1612547156.692 [SBIT](IMPORTANT): git: 2020-11-25
2021-02-05T17:45:56.693Z,1612547156.693 [SBIT](INFO): git hash: 5e13bf84858840c906f3eccd44caf880a68d7500
2021-02-05T17:45:56.693Z,1612547156.693 [SBIT](IMPORTANT): Kernel Release: 2.6.27.8
2021-02-05T17:45:56.694Z,1612547156.694 [SBIT](INFO): Kernel Reporting Different Version From Configuration.
Kernel Expected: #2 PREEMPT Thu Jan 11 20:13:48 PST 2018
Kernel Reported: #1 PREEMPT Wed Nov 13 12:38:10 PST 2019
2021-02-05T17:45:56.695Z,1612547156.695 [SBIT](INFO): Beginning SBIT in 44.000000 seconds.
2021-02-05T17:45:56.696Z,1612547156.696 [IBIT](INFO): Initialize IBIT Component.
2021-02-05T17:45:56.696Z,1612547156.696 [CBIT](DEBUG): Initialize CBIT Component.
2021-02-05T17:45:56.697Z,1612547156.697 [logger ThreadHandler](INFO): Handler Thread ID is 2038
2021-02-05T17:45:56.708Z,1612547156.708 [CBIT](DEBUG): Initialized mux pins.
2021-02-05T17:45:56.708Z,1612547156.708 [CBIT](DEBUG): Initializing the watchdog timer.
2021-02-05T17:45:56.716Z,1612547156.716 [DataOverHttps ThreadHandler](INFO): Handler Thread ID is 2039
2021-02-05T17:45:56.717Z,1612547156.717 [DataOverHttps](DEBUG): dashIP=134.89.2.23 starts with a digit so assuming it is a numeric IP
2021-02-05T17:45:56.728Z,1612547156.728 [Onboard ThreadHandler](INFO): Handler Thread ID is 2040
2021-02-05T17:45:56.732Z,1612547156.732 [CBIT](INFO): Last reboot was NOT due to watchdog timer.
2021-02-05T17:45:56.732Z,1612547156.732 [CBIT](DEBUG): Initializing heartbeat.
2021-02-05T17:45:56.748Z,1612547156.748 [Radio_Surface ThreadHandler](INFO): Handler Thread ID is 2041
2021-02-05T17:45:56.764Z,1612547156.764 [CTD_Seabird ThreadHandler](INFO): Handler Thread ID is 2042
2021-02-05T17:45:56.765Z,1612547156.765 [CTD_Seabird](DEBUG): Initializing CTD_Seabird.
2021-02-05T17:45:56.769Z,1612547156.769 [WetLabsBB2FL ThreadHandler](INFO): Handler Thread ID is 2044
2021-02-05T17:45:56.770Z,1612547156.770 [WetLabsBB2FL](INFO): Powering down
2021-02-05T17:45:56.792Z,1612547156.792 [NavChartDb ThreadHandler](INFO): Handler Thread ID is 2045
2021-02-05T17:45:56.795Z,1612547156.795 [NavChartDb](INFO): Looking for Electronic Nav Chart file at: Resources/ElectronicNavigationCharts/US1WC07M.000
2021-02-05T17:45:56.795Z,1612547156.795 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US1WC07M.000
2021-02-05T17:45:56.795Z,1612547156.795 [NavChartDb](INFO): Looking for Electronic Nav Chart file at: Resources/ElectronicNavigationCharts/US2WC11M.000
2021-02-05T17:45:56.795Z,1612547156.795 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US2WC11M.000
2021-02-05T17:45:56.796Z,1612547156.796 [NavChartDb](INFO): Looking for Electronic Nav Chart file at: Resources/ElectronicNavigationCharts/US3CA52M.000
2021-02-05T17:45:56.796Z,1612547156.796 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US3CA52M.000
2021-02-05T17:45:56.796Z,1612547156.796 [NavChartDb](INFO): Looking for Electronic Nav Chart file at: Resources/ElectronicNavigationCharts/US4CA60M.000
2021-02-05T17:45:56.796Z,1612547156.796 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US4CA60M.000
2021-02-05T17:45:56.796Z,1612547156.796 [NavChartDb](INFO): Looking for Electronic Nav Chart file at: Resources/ElectronicNavigationCharts/US5CA50M.000
2021-02-05T17:45:56.796Z,1612547156.796 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA50M.000
2021-02-05T17:45:56.797Z,1612547156.797 [NavChartDb](INFO): Looking for Electronic Nav Chart file at: Resources/ElectronicNavigationCharts/US5CA61M.000
2021-02-05T17:45:56.797Z,1612547156.797 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA61M.000
2021-02-05T17:45:56.797Z,1612547156.797 [NavChartDb](INFO): Looking for Electronic Nav Chart file at: Resources/ElectronicNavigationCharts/US5CA62M.000
2021-02-05T17:45:56.797Z,1612547156.797 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA62M.000
2021-02-05T17:45:56.797Z,1612547156.797 [NavChartDb](INFO): Looking for Electronic Nav Chart file at: Resources/ElectronicNavigationCharts/US5CA83M.000
2021-02-05T17:45:56.797Z,1612547156.797 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA83M.000
2021-02-05T17:45:56.804Z,1612547156.804 [CBIT](DEBUG): Deactivating GF circuits.
2021-02-05T17:45:56.804Z,1612547156.804 [CBIT](DEBUG): Deactivating emergency mode.
2021-02-05T17:45:56.840Z,1612547156.840 [CBIT](DEBUG): Backplane powered.
2021-02-05T17:45:56.841Z,1612547156.841 [MissionManager](INFO): Loading Mission: Missions/Startup.xml
2021-02-05T17:45:56.850Z,1612547156.850 [Startup:A.GoToSurface](DEBUG): Construct GoToSurface.
2021-02-05T17:45:56.861Z,1612547156.861 [MissionManager](DEBUG): 
<?xml version="1.0" encoding="UTF-8"?>
<Mission xmlns="Tethys"
       xmlns:Control="Tethys/Control"
       xmlns:Guidance="Tethys/Guidance" 
       xmlns:Units="Tethys/Units"
       xmlns:Universal="Tethys/Universal"
       xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
       xsi:schemaLocation="Tethys http://okeanids.mbari.org/tethys/Xml/Tethys.xsd
                           Tethys/Control http://okeanids.mbari.org/tethys/Xml/Control.xsd
                           Tethys/Guidance http://okeanids.mbari.org/tethys/Xml/Guidance.xsd
                           Tethys/Units http://okeanids.mbari.org/tethys/Xml/Units.xsd
                           Tethys/Universal http://okeanids.mbari.org/tethys/Xml/Universal.xsd"
       Id="Startup">

    <Guidance:GoToSurface>
        <Progression/>
    </Guidance:GoToSurface>

    <Aggregate Id="StartupSatComms">

        <Sequence/>

        <ReadDatum>
            <Timeout Duration="P1M" />
            <Universal:latitude_fix/>
        </ReadDatum>

        <ReadDatum>
            <Timeout Duration="P1M" />
            <Universal:platform_communications/>
        </ReadDatum>

    </Aggregate>

</Mission>


2021-02-05T17:45:56.861Z,1612547156.861 [MissionManager](INFO): Loading Mission: Missions/Default.xml
2021-02-05T17:45:56.934Z,1612547156.934 [MissionManager](INFO): DefineArg Default.ElapsedSinceDefaultStarted = 0.000000 min
2021-02-05T17:45:56.935Z,1612547156.935 [Default:A.Wait](DEBUG): Construct Wait.
2021-02-05T17:45:56.936Z,1612547156.936 [Default:B.GoToSurface](DEBUG): Construct GoToSurface.
2021-02-05T17:45:56.972Z,1612547156.972 [Default:CheckIn:Read_Iridium:A_Timeout:A.Execute](DEBUG): Construct Execute.
2021-02-05T17:45:56.974Z,1612547156.974 [Default:CheckIn:C.Wait](DEBUG): Construct Wait.
2021-02-05T17:45:56.994Z,1612547156.994 [Default:E.Execute](DEBUG): Construct Execute.
2021-02-05T17:45:57.014Z,1612547157.014 [MissionManager](DEBUG): 
<?xml version="1.0" encoding="UTF-8"?>
<Mission xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
         xmlns="Tethys"
         xmlns:Units="Tethys/Units"
         xmlns:Guidance="Tethys/Guidance"
         xmlns:Universal="Tethys/Universal"
         xsi:schemaLocation="Tethys http://okeanids.mbari.org/tethys/Xml/Tethys.xsd
                             Tethys/Units http://okeanids.mbari.org/tethys/Xml/Units.xsd
                             Tethys/Guidance http://okeanids.mbari.org/tethys/Xml/Guidance.xsd
                             Tethys/Universal http://okeanids.mbari.org/tethys/Xml/Universal.xsd"
         Id="Default">

    <DefineArg Name="ElapsedSinceDefaultStarted"><Units:minute/><Value>0</Value></DefineArg>

    <Guidance:Wait>
        <Description>
            Wait a moment to see if the scheduler starts a new mission before
            starting to actually run Default.
        </Description>
        <Sequence/>
        <Setting><Guidance:Wait.duration/><Units:second/><Value>13</Value></Setting>
    </Guidance:Wait>

    <Guidance:GoToSurface>
        <Progression/>
    </Guidance:GoToSurface>

    <Aggregate Id="CheckIn">

        <Sequence Repeat="288"/>

        <ReadDatum Id="Read_GPS">
            <Timeout Duration="P5M"/>
            <Universal:time_fix/>
        </ReadDatum>

        <ReadDatum Id="Read_Iridium">
            <Timeout Duration="P2H">
                <Guidance:Execute>
                    <Sequence/>
                    <Setting><Guidance:Execute.command/><String>Burn on</String></Setting>
                </Guidance:Execute>
                <Syslog Severity="Critical">Dropped weight due to communications timeout.</Syslog>
            </Timeout>
            <Universal:platform_communications/>
        </ReadDatum>

        <Guidance:Wait>
            <Sequence/>
            <Setting><Guidance:Wait.duration/><Units:minute/><Value>5</Value></Setting>
        </Guidance:Wait>

        <Assign><Sequence/><Arg Name="ElapsedSinceDefaultStarted"/><Elapsed><Universal:mission_started/></Elapsed></Assign>

        <Syslog Severity="Important">Default mission has been running for <Arg Name="ElapsedSinceDefaultStarted"/><Units:minute/></Syslog>

    </Aggregate>

    <Syslog Severity="Important">Restarting logs and Default mission.</Syslog>

    <Guidance:Execute>
        <Sequence/>
        <Setting><Guidance:Execute.command/><String>restart logs</String></Setting>
    </Guidance:Execute>

</Mission>


2021-02-05T17:45:57.018Z,1612547157.018 [controlThread](DEBUG): Component order: CycleStarter,AHRS_M2,Depth_Keller,NAL9602,BPC1,AMEcho,CANONSampler,PAR_Licor,Depth_Keller,PAR_Licor,DepthRateCalculator,PitchRateCalculator,SpeedCalculator,TempGradientCalculator,YawRateCalculator,ElevatorOffsetCalculator,DeadReckonUsingMultipleVelocitySources,NavChart,UniversalFixResidualReporter,MissionManager,VerticalControl,HorizontalControl,SpeedControl,LoopControl,BuoyancyServo,ElevatorServo,MassServo,RudderServo,ThrusterServo,SBIT,IBIT,CBIT,Reporter,LogSplitter,
2021-02-05T17:45:57.028Z,1612547157.028 [AHRS_M2](DEBUG): Initializing AHRS_M2.
2021-02-05T17:45:57.075Z,1612547157.075 [Depth_Keller](ERROR): Pressure reading out of range: 1831.023193 decibar
2021-02-05T17:45:57.120Z,1612547157.120 [AMEcho](INFO): Powering up
2021-02-05T17:45:57.122Z,1612547157.122 [AMEcho](INFO): Powered 24V power converter LCB with command: ! echo 1 > /dev/loadB2
2021-02-05T17:45:57.136Z,1612547157.136 [CANONSampler](INFO): Powering down
2021-02-05T17:45:57.152Z,1612547157.152 [Radio_Surface](INFO): Powering up
2021-02-05T17:45:57.184Z,1612547157.184 [CommandLine](IMPORTANT): got command ! echo 1 > /dev/loadB2
2021-02-05T17:45:57.254Z,1612547157.254 [DepthRateCalculator](ERROR): Depth measurement is not active
2021-02-05T17:45:57.302Z,1612547157.302 [BuoyancyServo](DEBUG): Initializing EZServoServo.
2021-02-05T17:45:57.311Z,1612547157.311 [BuoyancyServo](DEBUG): Initializing BuoyancyServo.
2021-02-05T17:45:57.317Z,1612547157.317 [ElevatorServo](DEBUG): Initializing EZServoServo.
2021-02-05T17:45:57.324Z,1612547157.324 [ElevatorServo](DEBUG): Initializing ElevatorServo.
2021-02-05T17:45:57.325Z,1612547157.325 [MassServo](DEBUG): Initializing EZServoServo.
2021-02-05T17:45:57.332Z,1612547157.332 [MassServo](DEBUG): Initializing MassServo.
2021-02-05T17:45:57.333Z,1612547157.333 [RudderServo](DEBUG): Initializing EZServoServo.
2021-02-05T17:45:57.340Z,1612547157.340 [RudderServo](DEBUG): Initializing RudderServo.
2021-02-05T17:45:57.341Z,1612547157.341 [ThrusterServo](DEBUG): Initializing EZServoServo.
2021-02-05T17:45:57.352Z,1612547157.352 [ThrusterServo](DEBUG): Initializing ThrusterServo.
2021-02-05T17:45:57.692Z,1612547157.692 [AMEcho](INFO): Powering down
2021-02-05T17:45:58.180Z,1612547158.180 [RudderServo](ERROR): Rudder initialization uart error serial timeout
2021-02-05T17:45:58.180Z,1612547158.180 [RudderServo](FAULT): Rudder failed to initialize
2021-02-05T17:45:58.180Z,1612547158.180 [RudderServo] Communications Fault, FailCount= 1
2021-02-05T17:45:58.180Z,1612547158.180 [RudderServo](ERROR): Communications Fault
2021-02-05T17:45:58.280Z,1612547158.280 [CBIT](ERROR): Communications Fault in component: RudderServo
2021-02-05T17:45:58.289Z,1612547158.289 [AMEcho](IMPORTANT): Setting 'depthThreshold' to 20.000000
2021-02-05T17:45:58.477Z,1612547158.477 [RudderServo](DEBUG): Uninitialize Rudder Servo.
2021-02-05T17:45:58.477Z,1612547158.477 [RudderServo](INFO): Powering down
2021-02-05T17:45:59.139Z,1612547159.139 [RudderServo](DEBUG): Initializing EZServoServo.
2021-02-05T17:45:59.261Z,1612547159.261 [RudderServo](DEBUG): Initializing RudderServo.
2021-02-05T17:45:59.264Z,1612547159.264 [CBIT](INFO): Clearing failed state for component RudderServo
2021-02-05T17:45:59.264Z,1612547159.264 [RudderServo] No Fault, FailCount= 1
2021-02-05T17:46:00.628Z,1612547160.628 [AHRS_M2](ERROR): setBoresightMatrix UART error: serial timeout
2021-02-05T17:46:01.052Z,1612547161.052 [AHRS_M2](ERROR): setBoresightMatrix UART error: serial timeout
2021-02-05T17:46:01.564Z,1612547161.564 [AHRS_M2](ERROR): setBoresightMatrix UART error: serial timeout
2021-02-05T17:46:02.140Z,1612547162.140 [AHRS_M2](ERROR): setBoresightMatrix UART error: serial timeout
2021-02-05T17:46:02.592Z,1612547162.592 [AHRS_M2](ERROR): setBoresightMatrix UART error: serial timeout
2021-02-05T17:46:03.088Z,1612547163.088 [AHRS_M2](ERROR): setBoresightMatrix UART error: serial timeout
2021-02-05T17:46:03.556Z,1612547163.556 [AHRS_M2](ERROR): setBoresightMatrix UART error: serial timeout
2021-02-05T17:46:04.144Z,1612547164.144 [AHRS_M2](ERROR): setBoresightMatrix UART error: serial timeout
2021-02-05T17:46:04.616Z,1612547164.616 [AHRS_M2](ERROR): setBoresightMatrix UART error: serial timeout
2021-02-05T17:46:05.084Z,1612547165.084 [AHRS_M2](ERROR): setBoresightMatrix UART error: serial timeout
2021-02-05T17:46:05.584Z,1612547165.584 [AHRS_M2](ERROR): setBoresightMatrix UART error: serial timeout
2021-02-05T17:46:06.044Z,1612547166.044 [AHRS_M2](ERROR): setBoresightMatrix UART error: serial timeout
2021-02-05T17:46:06.524Z,1612547166.524 [AHRS_M2](ERROR): setBoresightMatrix UART error: serial timeout
2021-02-05T17:46:06.992Z,1612547166.992 [AHRS_M2](ERROR): setBoresightMatrix UART error: serial timeout
2021-02-05T17:46:07.112Z,1612547167.112 [CBIT](CRITICAL): Environmental Failure. Press:14.823949 PSI. Humidity:27%. Temp:20 C. ABORTING MISSION
2021-02-05T17:46:07.112Z,1612547167.112 [Supervisor](INFO): Stop Mission called by CBIT::monitorEnvironmentals
2021-02-05T17:46:07.444Z,1612547167.444 [AHRS_M2](ERROR): setBoresightMatrix UART error: serial timeout
2021-02-05T17:46:07.605Z,1612547167.605 [CommandLine](FAULT): Scheduling is paused
2021-02-05T17:46:07.605Z,1612547167.605 [CBIT](INFO): Critical error at 20210205T174607
2021-02-05T17:46:07.960Z,1612547167.960 [AHRS_M2](ERROR): setBoresightMatrix UART error: serial timeout
2021-02-05T17:46:08.432Z,1612547168.432 [AHRS_M2](ERROR): setBoresightMatrix UART error: serial timeout
2021-02-05T17:46:08.912Z,1612547168.912 [AHRS_M2](ERROR): setBoresightMatrix UART error: serial timeout
2021-02-05T17:46:09.408Z,1612547169.408 [AHRS_M2](ERROR): setBoresightMatrix UART error: serial timeout
2021-02-05T17:46:09.816Z,1612547169.816 [CTD_Seabird](FAULT): Failed to initialize within timeout.
2021-02-05T17:46:09.816Z,1612547169.816 [CTD_Seabird] Communications Fault, FailCount= 1
2021-02-05T17:46:09.816Z,1612547169.816 [CTD_Seabird](ERROR): Communications Fault
2021-02-05T17:46:09.864Z,1612547169.864 [AHRS_M2](ERROR): setBoresightMatrix UART error: serial timeout
2021-02-05T17:46:10.136Z,1612547170.136 [CBIT](ERROR): Communications Fault in component: CTD_Seabird
2021-02-05T17:46:10.220Z,1612547170.220 [CTD_Seabird](INFO): Powering down
2021-02-05T17:46:10.464Z,1612547170.464 [AHRS_M2](ERROR): setBoresightMatrix UART error: serial timeout
2021-02-05T17:46:10.464Z,1612547170.464 [AHRS_M2](FAULT): Failed to initialize within timeout.
2021-02-05T17:46:10.464Z,1612547170.464 [AHRS_M2] Communications Fault, FailCount= 1
2021-02-05T17:46:10.464Z,1612547170.464 [AHRS_M2](ERROR): Communications Fault
2021-02-05T17:46:10.595Z,1612547170.595 [CBIT](ERROR): Communications Fault in component: AHRS_M2
2021-02-05T17:46:10.600Z,1612547170.600 [AHRS_M2](INFO): Powering down
2021-02-05T17:46:10.662Z,1612547170.662 [DataOverHttps](INFO): setting available, lastComms_.elapsed()=0.004623
2021-02-05T17:46:11.540Z,1612547171.540 [CBIT](INFO): Clearing failed state for component AHRS_M2
2021-02-05T17:46:11.540Z,1612547171.540 [AHRS_M2] No Fault, FailCount= 1
2021-02-05T17:46:11.540Z,1612547171.540 [CBIT](INFO): Clearing failed state for component CTD_Seabird
2021-02-05T17:46:11.540Z,1612547171.540 [CTD_Seabird] No Fault, FailCount= 1
2021-02-05T17:46:11.564Z,1612547171.564 [CTD_Seabird](DEBUG): Initializing CTD_Seabird.
2021-02-05T17:46:11.812Z,1612547171.812 [AHRS_M2](DEBUG): Initializing AHRS_M2.
2021-02-05T17:46:15.364Z,1612547175.364 [AHRS_M2](ERROR): setBoresightMatrix UART error: serial timeout
2021-02-05T17:46:15.844Z,1612547175.844 [AHRS_M2](ERROR): setBoresightMatrix UART error: serial timeout
2021-02-05T17:46:16.368Z,1612547176.368 [AHRS_M2](ERROR): setBoresightMatrix UART error: serial timeout
2021-02-05T17:46:16.780Z,1612547176.780 [AHRS_M2](ERROR): setBoresightMatrix UART error: serial timeout
2021-02-05T17:46:17.204Z,1612547177.204 [AHRS_M2](ERROR): setBoresightMatrix UART error: serial timeout
2021-02-05T17:46:17.632Z,1612547177.632 [AHRS_M2](ERROR): setBoresightMatrix UART error: serial timeout
2021-02-05T17:46:18.028Z,1612547178.028 [AHRS_M2](ERROR): setBoresightMatrix UART error: serial timeout
2021-02-05T17:46:18.452Z,1612547178.452 [AHRS_M2](ERROR): setBoresightMatrix UART error: serial timeout
2021-02-05T17:46:18.928Z,1612547178.928 [AHRS_M2](ERROR): setBoresightMatrix UART error: serial timeout
2021-02-05T17:46:19.332Z,1612547179.332 [AHRS_M2](ERROR): setBoresightMatrix UART error: serial timeout
2021-02-05T17:46:19.740Z,1612547179.740 [AHRS_M2](ERROR): setBoresightMatrix UART error: serial timeout
2021-02-05T17:46:20.156Z,1612547180.156 [AHRS_M2](ERROR): setBoresightMatrix UART error: serial timeout
2021-02-05T17:46:20.568Z,1612547180.568 [AHRS_M2](ERROR): setBoresightMatrix UART error: serial timeout
2021-02-05T17:46:20.984Z,1612547180.984 [AHRS_M2](ERROR): setBoresightMatrix UART error: serial timeout
2021-02-05T17:46:21.392Z,1612547181.392 [AHRS_M2](ERROR): setBoresightMatrix UART error: serial timeout
2021-02-05T17:46:21.796Z,1612547181.796 [AHRS_M2](ERROR): setBoresightMatrix UART error: serial timeout
2021-02-05T17:46:22.208Z,1612547182.208 [AHRS_M2](ERROR): setBoresightMatrix UART error: serial timeout
2021-02-05T17:46:22.620Z,1612547182.620 [AHRS_M2](ERROR): setBoresightMatrix UART error: serial timeout
2021-02-05T17:46:23.004Z,1612547183.004 [AHRS_M2](ERROR): setBoresightMatrix UART error: serial timeout
2021-02-05T17:46:23.416Z,1612547183.416 [AHRS_M2](ERROR): setBoresightMatrix UART error: serial timeout
2021-02-05T17:46:23.820Z,1612547183.820 [AHRS_M2](ERROR): setBoresightMatrix UART error: serial timeout
2021-02-05T17:46:24.228Z,1612547184.228 [AHRS_M2](ERROR): setBoresightMatrix UART error: serial timeout
2021-02-05T17:46:24.616Z,1612547184.616 [CTD_Seabird](FAULT): Failed to initialize within timeout.
2021-02-05T17:46:24.616Z,1612547184.616 [CTD_Seabird] Communications Fault, FailCount= 2
2021-02-05T17:46:24.616Z,1612547184.616 [CTD_Seabird](ERROR): Communications Fault
2021-02-05T17:46:24.648Z,1612547184.648 [AHRS_M2](ERROR): setBoresightMatrix UART error: serial timeout
2021-02-05T17:46:24.648Z,1612547184.648 [AHRS_M2](FAULT): Failed to initialize within timeout.
2021-02-05T17:46:24.648Z,1612547184.648 [AHRS_M2] Communications Fault, FailCount= 2
2021-02-05T17:46:24.648Z,1612547184.648 [AHRS_M2](ERROR): Communications Fault
2021-02-05T17:46:24.756Z,1612547184.756 [CBIT](ERROR): Communications Fault in component: AHRS_M2
2021-02-05T17:46:24.756Z,1612547184.756 [CBIT](ERROR): Communications Fault in component: CTD_Seabird
2021-02-05T17:46:24.765Z,1612547184.765 [AHRS_M2](INFO): Powering down
2021-02-05T17:46:24.841Z,1612547184.841 [NAL9602](INFO): Powering up NAL9602
2021-02-05T17:46:25.020Z,1612547185.020 [CTD_Seabird](INFO): Powering down
2021-02-05T17:46:25.633Z,1612547185.633 [CBIT](INFO): Clearing failed state for component AHRS_M2
2021-02-05T17:46:25.633Z,1612547185.633 [AHRS_M2] No Fault, FailCount= 2
2021-02-05T17:46:25.972Z,1612547185.972 [AHRS_M2](DEBUG): Initializing AHRS_M2.
2021-02-05T17:46:26.018Z,1612547186.018 [CBIT](INFO): Clearing failed state for component CTD_Seabird
2021-02-05T17:46:26.018Z,1612547186.018 [CTD_Seabird] No Fault, FailCount= 2
2021-02-05T17:46:26.360Z,1612547186.360 [CTD_Seabird](DEBUG): Initializing CTD_Seabird.
2021-02-05T17:46:29.149Z,1612547189.149 [CommandLine](IMPORTANT): got command configSet AHRS_M2.loadAtStartup 0.000000 bool persist
2021-02-05T17:46:29.149Z,1612547189.149 [CommandLine](IMPORTANT): configSet AHRS_M2.loadAtStartup requires a restart to take effect.
2021-02-05T17:46:29.516Z,1612547189.516 [AHRS_M2](ERROR): setBoresightMatrix UART error: serial timeout
2021-02-05T17:46:29.932Z,1612547189.932 [AHRS_M2](ERROR): setBoresightMatrix UART error: serial timeout
2021-02-05T17:46:30.348Z,1612547190.348 [AHRS_M2](ERROR): setBoresightMatrix UART error: serial timeout
2021-02-05T17:46:30.776Z,1612547190.776 [AHRS_M2](ERROR): setBoresightMatrix UART error: serial timeout
2021-02-05T17:46:31.204Z,1612547191.204 [AHRS_M2](ERROR): setBoresightMatrix UART error: serial timeout
2021-02-05T17:46:31.640Z,1612547191.640 [AHRS_M2](ERROR): setBoresightMatrix UART error: serial timeout
2021-02-05T17:46:32.092Z,1612547192.092 [AHRS_M2](ERROR): setBoresightMatrix UART error: serial timeout
2021-02-05T17:46:32.520Z,1612547192.520 [AHRS_M2](ERROR): setBoresightMatrix UART error: serial timeout
2021-02-05T17:46:32.732Z,1612547192.732 [CommandLine](IMPORTANT): got command restart application
2021-02-05T17:46:32.932Z,1612547192.932 [AHRS_M2](ERROR): setBoresightMatrix UART error: serial timeout
2021-02-05T17:46:33.348Z,1612547193.348 [AHRS_M2](ERROR): setBoresightMatrix UART error: serial timeout
2021-02-05T17:46:33.736Z,1612547193.736 [CommandLine ThreadHandler](INFO): Uninitializing protected caller thread.
2021-02-05T17:46:33.736Z,1612547193.736 [CommandLine ThreadHandler](INFO): Thread cancelled.
2021-02-05T17:46:33.756Z,1612547193.756 [AHRS_M2](ERROR): setBoresightMatrix UART error: serial timeout
2021-02-05T17:46:33.790Z,1612547193.790 [Supervisor](DEBUG): Uninitializing supervisor and starting cleanup.  Bye!
2021-02-05T17:46:33.791Z,1612547193.791 [CommandLine ThreadHandler](INFO): Thread cancelled.
2021-02-05T17:46:33.791Z,1612547193.791 [CommandLine](INFO): Join timeout helper Thread ID is 2059
2021-02-05T17:46:33.804Z,1612547193.804 [ComponentRegistry](INFO): Shutting down NavChartDb ThreadHandler
2021-02-05T17:46:33.804Z,1612547193.804 [NavChartDb ThreadHandler](INFO): Thread cancelled.
2021-02-05T17:46:33.804Z,1612547193.804 [NavChartDb](INFO): Join timeout helper Thread ID is 2060
2021-02-05T17:46:34.216Z,1612547194.216 [AHRS_M2](ERROR): setBoresightMatrix UART error: serial timeout
2021-02-05T17:46:34.636Z,1612547194.636 [AHRS_M2](ERROR): setBoresightMatrix UART error: serial timeout
2021-02-05T17:46:35.056Z,1612547195.056 [AHRS_M2](ERROR): setBoresightMatrix UART error: serial timeout
2021-02-05T17:46:35.166Z,1612547195.166 [NavChartDb ThreadHandler](INFO): Uninitializing protected caller thread.
2021-02-05T17:46:35.166Z,1612547195.166 [NavChartDb ThreadHandler](INFO): Thread cancelled.
2021-02-05T17:46:35.172Z,1612547195.172 [ComponentRegistry](INFO): Shutting down WetLabsBB2FL ThreadHandler
2021-02-05T17:46:35.172Z,1612547195.172 [WetLabsBB2FL ThreadHandler](INFO): Thread cancelled.
2021-02-05T17:46:35.172Z,1612547195.172 [WetLabsBB2FL](INFO): Join timeout helper Thread ID is 2061
2021-02-05T17:46:35.436Z,1612547195.436 [AHRS_M2](ERROR): setBoresightMatrix UART error: serial timeout
2021-02-05T17:46:35.596Z,1612547195.596 [WetLabsBB2FL ThreadHandler](INFO): Uninitializing protected caller thread.
2021-02-05T17:46:35.596Z,1612547195.596 [WetLabsBB2FL](INFO): Powering down
2021-02-05T17:46:35.597Z,1612547195.597 [WetLabsBB2FL ThreadHandler](INFO): Thread cancelled.
2021-02-05T17:46:35.616Z,1612547195.616 [ComponentRegistry](INFO): Shutting down CTD_Seabird ThreadHandler
2021-02-05T17:46:35.616Z,1612547195.616 [CTD_Seabird ThreadHandler](INFO): Thread cancelled.
2021-02-05T17:46:35.616Z,1612547195.616 [CTD_Seabird](INFO): Join timeout helper Thread ID is 2062
2021-02-05T17:46:35.840Z,1612547195.840 [AHRS_M2](ERROR): setBoresightMatrix UART error: serial timeout
2021-02-05T17:46:35.849Z,1612547195.849 [NAL9602](INFO): NAL9602 initialized
2021-02-05T17:46:36.240Z,1612547196.240 [AHRS_M2](ERROR): setBoresightMatrix UART error: serial timeout
2021-02-05T17:46:36.400Z,1612547196.400 [CTD_Seabird](INFO): Powering down
2021-02-05T17:46:36.532Z,1612547196.532 [CTD_Seabird ThreadHandler](INFO): Uninitializing protected caller thread.
2021-02-05T17:46:36.532Z,1612547196.532 [CTD_Seabird](INFO): Powering down
2021-02-05T17:46:36.545Z,1612547196.545 [CTD_Seabird ThreadHandler](INFO): Thread cancelled.
2021-02-05T17:46:36.564Z,1612547196.564 [ComponentRegistry](INFO): Shutting down Radio_Surface ThreadHandler
2021-02-05T17:46:36.564Z,1612547196.564 [Radio_Surface ThreadHandler](INFO): Thread cancelled.
2021-02-05T17:46:36.564Z,1612547196.564 [Radio_Surface](INFO): Join timeout helper Thread ID is 2063
2021-02-05T17:46:36.644Z,1612547196.644 [AHRS_M2](ERROR): setBoresightMatrix UART error: serial timeout
2021-02-05T17:46:36.776Z,1612547196.776 [Radio_Surface](INFO): Powering down
2021-02-05T17:46:36.777Z,1612547196.777 [Radio_Surface ThreadHandler](INFO): Uninitializing protected caller thread.
2021-02-05T17:46:36.777Z,1612547196.777 [Radio_Surface ThreadHandler](INFO): Thread cancelled.
2021-02-05T17:46:36.788Z,1612547196.788 [ComponentRegistry](INFO): Shutting down Onboard ThreadHandler
2021-02-05T17:46:36.789Z,1612547196.789 [Onboard ThreadHandler](INFO): Thread cancelled.
2021-02-05T17:46:36.789Z,1612547196.789 [Onboard](INFO): Join timeout helper Thread ID is 2064
2021-02-05T17:46:36.793Z,1612547196.793 [Onboard ThreadHandler](INFO): Uninitializing protected caller thread.
2021-02-05T17:46:36.793Z,1612547196.793 [Onboard ThreadHandler](INFO): Thread cancelled.
2021-02-05T17:46:36.808Z,1612547196.808 [ComponentRegistry](INFO): Shutting down DataOverHttps ThreadHandler
2021-02-05T17:46:36.809Z,1612547196.809 [DataOverHttps ThreadHandler](INFO): Thread cancelled.
2021-02-05T17:46:36.809Z,1612547196.809 [DataOverHttps](INFO): Join timeout helper Thread ID is 2065
2021-02-05T17:46:36.000Z,1612547197.000 [DataOverHttps ThreadHandler](INFO): Uninitializing protected caller thread.
2021-02-05T17:46:37.003Z,1612547197.003 [DataOverHttps ThreadHandler](INFO): Thread cancelled.
2021-02-05T17:46:37.016Z,1612547197.016 [ComponentRegistry](INFO): Shutting down logger ThreadHandler
2021-02-05T17:46:37.016Z,1612547197.016 [logger ThreadHandler](INFO): Thread cancelled.
2021-02-05T17:46:37.017Z,1612547197.017 [logger](INFO): Join timeout helper Thread ID is 2066
2021-02-05T17:46:37.047Z,1612547197.047 [AHRS_M2](ERROR): setBoresightMatrix UART error: serial timeout
2021-02-05T17:46:37.060Z,1612547197.060 [logger ThreadHandler](INFO): Uninitializing protected caller thread.
2021-02-05T17:46:37.060Z,1612547197.060 [logger ThreadHandler](INFO): Thread cancelled.
2021-02-05T17:46:37.076Z,1612547197.076 [ComponentRegistry](INFO): Shutting down CommandLine ThreadHandler
2021-02-05T17:46:37.077Z,1612547197.077 [CommandLine ThreadHandler](INFO): Thread cancelled.
2021-02-05T17:46:37.077Z,1612547197.077 [ComponentRegistry](INFO): Shutting down controlThread ThreadHandler
2021-02-05T17:46:37.077Z,1612547197.077 [controlThread ThreadHandler](INFO): Thread cancelled.
2021-02-05T17:46:37.077Z,1612547197.077 [controlThread](INFO): Join timeout helper Thread ID is 2067
2021-02-05T17:46:37.088Z,1612547197.088 [controlThread ThreadHandler](INFO): Uninitializing protected caller thread.
2021-02-05T17:46:37.088Z,1612547197.088 [controlThread](DEBUG): Uninitializing ControlThread
2021-02-05T17:46:37.088Z,1612547197.088 [AHRS_M2](INFO): Powering down
2021-02-05T17:46:37.160Z,1612547197.160 [NAL9602](INFO): Powering down
2021-02-05T17:46:37.162Z,1612547197.162 [AMEcho](INFO): Powering down
2021-02-05T17:46:37.164Z,1612547197.164 [DepthRateCalculator](DEBUG): Uninitializing DepthRateCalculator.
2021-02-05T17:46:37.165Z,1612547197.165 [ElevatorOffsetCalculator](DEBUG): Uninitializing ElevatorOffsetCalculator.
2021-02-05T17:46:37.165Z,1612547197.165 [NavChart](DEBUG): Uninitialize NavChart Navigation.
2021-02-05T17:46:37.166Z,1612547197.166 [MissionManager](INFO): Uninitializing Mission Default
2021-02-05T17:46:37.168Z,1612547197.168 [MissionManager](INFO): Uninitializing Mission Startup
2021-02-05T17:46:37.169Z,1612547197.169 [VerticalControl](DEBUG): Uninitialize VerticalControlComponent.
2021-02-05T17:46:37.170Z,1612547197.170 [HorizontalControl](DEBUG): Uninitialize HorizontalControlComponent.
2021-02-05T17:46:37.170Z,1612547197.170 [SpeedControl](DEBUG): Uninitialize SpeedControlComponent.
2021-02-05T17:46:37.170Z,1612547197.170 [LoopControl](DEBUG): Uninitialize LoopControlComponent.
2021-02-05T17:46:37.170Z,1612547197.170 [BuoyancyServo](DEBUG): Uninitialize Buoyancy Servo.
2021-02-05T17:46:37.170Z,1612547197.170 [BuoyancyServo](INFO): Powering down
2021-02-05T17:46:37.184Z,1612547197.184 [ElevatorServo](DEBUG): Uninitialize Elevator Servo.
2021-02-05T17:46:37.184Z,1612547197.184 [ElevatorServo](INFO): Powering down
2021-02-05T17:46:37.185Z,1612547197.185 [MassServo](DEBUG): Uninitialize Mass Servo.
2021-02-05T17:46:37.185Z,1612547197.185 [MassServo](INFO): Powering down
2021-02-05T17:46:37.185Z,1612547197.185 [RudderServo](DEBUG): Uninitialize Rudder Servo.
2021-02-05T17:46:37.186Z,1612547197.186 [RudderServo](INFO): Powering down
2021-02-05T17:46:37.186Z,1612547197.186 [ThrusterServo](DEBUG): Uninitialize Thruster Servo.
2021-02-05T17:46:37.186Z,1612547197.186 [ThrusterServo](INFO): Powering down
2021-02-05T17:46:37.187Z,1612547197.187 [SBIT](DEBUG): Uninitialize SBIT Component.
2021-02-05T17:46:37.187Z,1612547197.187 [IBIT](DEBUG): Uninitialize IBIT Component.
2021-02-05T17:46:37.188Z,1612547197.188 [CBIT](DEBUG): Uninitialize CBIT Component.
2021-02-05T17:46:37.188Z,1612547197.188 [CBIT](DEBUG): Powering off loads.
2021-02-05T17:46:37.199Z,1612547197.199 [CBIT](DEBUG): Disabling WDT.
2021-02-05T17:46:37.211Z,1612547197.211 [CBIT](DEBUG): Opening all GF detection circuits.
2021-02-05T17:46:37.212Z,1612547197.212 [controlThread ThreadHandler](INFO): Thread cancelled.
2021-02-05T17:46:37.420Z,1612547197.420 [Radio_Surface ThreadHandler](INFO): Thread cancelled.
2021-02-05T17:46:37.422Z,1612547197.422 [Onboard ThreadHandler](INFO): Thread cancelled.
2021-02-05T17:46:37.428Z,1612547197.428 [DataOverHttps ThreadHandler](INFO): Thread cancelled.
2021-02-05T17:46:37.460Z,1612547197.460 [WetLabsBB2FL ThreadHandler](INFO): Thread cancelled.
2021-02-05T17:46:37.464Z,1612547197.464 [CTD_Seabird ThreadHandler](INFO): Thread cancelled.
2021-02-05T17:46:37.507Z,1612547197.507 [NavChartDb ThreadHandler](INFO): Thread cancelled.
2021-02-05T17:46:37.565Z,1612547197.565 [logger ThreadHandler](INFO): Thread cancelled.