2018-11-26T23:21:36.958Z,1543274496.958 [Supervisor](DEBUG): Initializing supervisor.
2018-11-26T23:21:36.960Z,1543274496.960 [SyncHandler](DEBUG): Created PCaller Thread at 404514E0
2018-11-26T23:21:36.961Z,1543274496.961 [SyncHandler](INFO): Protected caller Thread ID is 797
2018-11-26T23:21:36.961Z,1543274496.961 [ComponentRegistry](DEBUG): Component "controlThread" handled in its own thread.
2018-11-26T23:21:36.962Z,1543274496.962 [controlThread ThreadHandler](DEBUG): Created PCaller Thread at 404814E0
2018-11-26T23:21:36.963Z,1543274496.963 [controlThread ThreadHandler](INFO): Protected caller Thread ID is 798
2018-11-26T23:21:36.965Z,1543274496.965 [ComponentRegistry](DEBUG): SyncComponent "CycleStarter" handled in the control thread.
2018-11-26T23:21:36.977Z,1543274496.977 [ComponentRegistry](DEBUG): Component "CommandLine" handled in its own thread.
2018-11-26T23:21:36.978Z,1543274496.978 [CommandLine ThreadHandler](DEBUG): Created PCaller Thread at 404B14E0
2018-11-26T23:21:36.978Z,1543274496.978 [CommandLine ThreadHandler](INFO): Protected caller Thread ID is 799
2018-11-26T23:21:36.979Z,1543274496.979 [ComponentRegistry](DEBUG): Component "logger" handled in its own thread.
2018-11-26T23:21:36.980Z,1543274496.980 [logger ThreadHandler](DEBUG): Created PCaller Thread at 404E14E0
2018-11-26T23:21:36.980Z,1543274496.980 [logger ThreadHandler](INFO): Protected caller Thread ID is 800
2018-11-26T23:21:36.982Z,1543274496.982 [ComponentRegistry](DEBUG): SyncComponent "LogSplitter" handled in the control thread.
2018-11-26T23:21:36.982Z,1543274496.982 [Supervisor](INFO): Looking for Config files in directory: Config/
2018-11-26T23:21:36.986Z,1543274496.986 [Supervisor](INFO): Opening Config file at: Config/Control.cfg
2018-11-26T23:21:37.310Z,1543274497.310 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Control
2018-11-26T23:21:37.312Z,1543274497.312 [Supervisor](INFO): Opening Config file at: Config/logger.cfg
2018-11-26T23:21:37.501Z,1543274497.501 [ComponentRegistry](DEBUG): Loaded Config Component "Config/logger
2018-11-26T23:21:37.502Z,1543274497.502 [Supervisor](INFO): Opening Config file at: Config/Servo.cfg
2018-11-26T23:21:37.789Z,1543274497.789 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Servo
2018-11-26T23:21:37.790Z,1543274497.790 [Supervisor](INFO): Opening Config file at: Config/Derivation.cfg
2018-11-26T23:21:37.932Z,1543274497.932 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Derivation
2018-11-26T23:21:37.934Z,1543274497.934 [Supervisor](INFO): Opening Config file at: Config/Sample.cfg
2018-11-26T23:21:38.033Z,1543274498.033 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Sample
2018-11-26T23:21:38.034Z,1543274498.034 [Supervisor](INFO): Opening Config file at: Config/Simulator.cfg
2018-11-26T23:21:38.499Z,1543274498.499 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Simulator
2018-11-26T23:21:38.500Z,1543274498.500 [Supervisor](INFO): Opening Config file at: Config/Sensor.cfg
2018-11-26T23:21:38.961Z,1543274498.961 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Sensor
2018-11-26T23:21:38.962Z,1543274498.962 [Supervisor](INFO): Opening Config file at: Config/vehicle.cfg
2018-11-26T23:21:39.422Z,1543274499.422 [ComponentRegistry](DEBUG): Loaded Config Component "Config/vehicle
2018-11-26T23:21:39.424Z,1543274499.424 [Supervisor](INFO): Opening Config file at: Config/workSite.cfg
2018-11-26T23:21:39.527Z,1543274499.527 [ComponentRegistry](DEBUG): Loaded Config Component "Config/workSite
2018-11-26T23:21:39.528Z,1543274499.528 [Supervisor](INFO): Opening Config file at: Config/secure.cfg
2018-11-26T23:21:39.624Z,1543274499.624 [ComponentRegistry](DEBUG): Loaded Config Component "Config/secure
2018-11-26T23:21:39.626Z,1543274499.626 [Supervisor](INFO): Opening Config file at: Config/Navigation.cfg
2018-11-26T23:21:39.841Z,1543274499.841 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Navigation
2018-11-26T23:21:39.843Z,1543274499.843 [Supervisor](INFO): Opening Config file at: Config/BIT.cfg
2018-11-26T23:21:40.044Z,1543274500.044 [ComponentRegistry](DEBUG): Loaded Config Component "Config/BIT
2018-11-26T23:21:40.046Z,1543274500.046 [Supervisor](INFO): Opening Config file at: Config/Science.cfg
2018-11-26T23:21:40.406Z,1543274500.406 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Science
2018-11-26T23:21:40.407Z,1543274500.407 [Supervisor](INFO): Opening Config file at: Config/Estimation.cfg
2018-11-26T23:21:40.553Z,1543274500.553 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Estimation
2018-11-26T23:21:40.614Z,1543274500.614 [Supervisor](INFO): Opening Config file at: Config/Guidance.cfg
2018-11-26T23:21:40.698Z,1543274500.698 [Supervisor](INFO): Looking for Config files in directory: Config/lrauv-daphne/
2018-11-26T23:21:41.133Z,1543274501.133 [Supervisor](INFO): Opening Config file at: Config/lrauv-daphne/Control.cfg
2018-11-26T23:21:41.235Z,1543274501.235 [Supervisor](INFO): Opening Config file at: Config/lrauv-daphne/logger.cfg
2018-11-26T23:21:41.350Z,1543274501.350 [Supervisor](INFO): Opening Config file at: Config/lrauv-daphne/Servo.cfg
2018-11-26T23:21:41.444Z,1543274501.444 [Supervisor](INFO): Opening Config file at: Config/lrauv-daphne/Simulator.cfg
2018-11-26T23:21:41.528Z,1543274501.528 [Supervisor](INFO): Opening Config file at: Config/lrauv-daphne/Sensor.cfg
2018-11-26T23:21:41.688Z,1543274501.688 [Supervisor](INFO): Opening Config file at: Config/lrauv-daphne/vehicle.cfg
2018-11-26T23:21:41.865Z,1543274501.865 [Supervisor](INFO): Opening Config file at: Config/lrauv-daphne/workSite.cfg
2018-11-26T23:21:41.942Z,1543274501.942 [Supervisor](INFO): Opening Config file at: Config/lrauv-daphne/Battery.cfg
2018-11-26T23:21:42.172Z,1543274502.172 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Battery
2018-11-26T23:21:42.172Z,1543274502.172 [Supervisor](INFO): Opening Config file at: Config/lrauv-daphne/secure.cfg
2018-11-26T23:21:42.255Z,1543274502.255 [Supervisor](INFO): Opening Config file at: Config/lrauv-daphne/Navigation.cfg
2018-11-26T23:21:42.344Z,1543274502.344 [Supervisor](INFO): Opening Config file at: Config/lrauv-daphne/BIT.cfg
2018-11-26T23:21:42.443Z,1543274502.443 [Supervisor](INFO): Opening Config file at: Config/lrauv-daphne/Science.cfg
2018-11-26T23:21:42.567Z,1543274502.567 [Supervisor](IMPORTANT): Reading configuration overrides from Data/persisted.cfg
2018-11-26T23:21:42.585Z,1543274502.585 [Module Loader](DEBUG): Loading Module at Modules/Guidance.so
2018-11-26T23:21:42.883Z,1543274502.883 [Module Loader](DEBUG): Loaded Module: Guidance (Contains behaviors and commands)
2018-11-26T23:21:42.884Z,1543274502.884 [Module Loader](DEBUG): Loading Module at Modules/Derivation.so
2018-11-26T23:21:42.943Z,1543274502.943 [DepthRateCalculator] Loaded
2018-11-26T23:21:42.944Z,1543274502.944 [ComponentRegistry](DEBUG): SyncComponent "DepthRateCalculator" handled in the control thread.
2018-11-26T23:21:42.950Z,1543274502.950 [PitchRateCalculator] Loaded
2018-11-26T23:21:42.950Z,1543274502.950 [ComponentRegistry](DEBUG): SyncComponent "PitchRateCalculator" handled in the control thread.
2018-11-26T23:21:42.966Z,1543274502.966 [SpeedCalculator] Loaded
2018-11-26T23:21:42.967Z,1543274502.967 [ComponentRegistry](DEBUG): SyncComponent "SpeedCalculator" handled in the control thread.
2018-11-26T23:21:42.988Z,1543274502.988 [TempGradientCalculator] Loaded
2018-11-26T23:21:42.988Z,1543274502.988 [ComponentRegistry](DEBUG): SyncComponent "TempGradientCalculator" handled in the control thread.
2018-11-26T23:21:42.994Z,1543274502.994 [YawRateCalculator] Loaded
2018-11-26T23:21:42.995Z,1543274502.995 [ComponentRegistry](DEBUG): SyncComponent "YawRateCalculator" handled in the control thread.
2018-11-26T23:21:43.035Z,1543274503.035 [ElevatorOffsetCalculator] Loaded
2018-11-26T23:21:43.036Z,1543274503.036 [ComponentRegistry](DEBUG): SyncComponent "ElevatorOffsetCalculator" handled in the control thread.
2018-11-26T23:21:43.036Z,1543274503.036 [Module Loader](DEBUG): Loaded Module: Derivation (Contains the base derivation components)
2018-11-26T23:21:43.037Z,1543274503.037 [Module Loader](DEBUG): Loading Module at Modules/Estimation.so
2018-11-26T23:21:43.143Z,1543274503.143 [Module Loader](DEBUG): Loaded Module: Estimation (Contains the base estimation components)
2018-11-26T23:21:43.145Z,1543274503.145 [Module Loader](DEBUG): Loading Module at Modules/Servo.so
2018-11-26T23:21:43.295Z,1543274503.295 [BuoyancyServo] Loaded
2018-11-26T23:21:43.296Z,1543274503.296 [ComponentRegistry](DEBUG): SyncComponent "BuoyancyServo" handled in the control thread.
2018-11-26T23:21:43.311Z,1543274503.311 [ElevatorServo] Loaded
2018-11-26T23:21:43.312Z,1543274503.312 [ComponentRegistry](DEBUG): SyncComponent "ElevatorServo" handled in the control thread.
2018-11-26T23:21:43.327Z,1543274503.327 [MassServo] Loaded
2018-11-26T23:21:43.327Z,1543274503.327 [ComponentRegistry](DEBUG): SyncComponent "MassServo" handled in the control thread.
2018-11-26T23:21:43.342Z,1543274503.342 [RudderServo] Loaded
2018-11-26T23:21:43.343Z,1543274503.343 [ComponentRegistry](DEBUG): SyncComponent "RudderServo" handled in the control thread.
2018-11-26T23:21:43.357Z,1543274503.357 [ThrusterServo] Loaded
2018-11-26T23:21:43.357Z,1543274503.357 [ComponentRegistry](DEBUG): SyncComponent "ThrusterServo" handled in the control thread.
2018-11-26T23:21:43.358Z,1543274503.358 [Module Loader](DEBUG): Loaded Module: Servo (This is the module containing motor controllers)
2018-11-26T23:21:43.358Z,1543274503.358 [Module Loader](DEBUG): Loading Module at Modules/Sample.so
2018-11-26T23:21:43.382Z,1543274503.382 [Module Loader](DEBUG): Loaded Module: Sample (This is a Sample Module of Sample Components)
2018-11-26T23:21:43.383Z,1543274503.383 [Module Loader](DEBUG): Loading Module at Modules/Simulator.so
2018-11-26T23:21:43.516Z,1543274503.516 [Module Loader](DEBUG): Loaded Module: Simulator (This is the module containing the Simulator)
2018-11-26T23:21:43.517Z,1543274503.517 [Module Loader](DEBUG): Loading Module at Modules/Sensor.so
2018-11-26T23:21:44.097Z,1543274504.097 [DataOverHttps] Loaded
2018-11-26T23:21:44.097Z,1543274504.097 [ComponentRegistry](DEBUG): SyncComponent "DataOverHttps" handled in the control thread.
2018-11-26T23:21:44.112Z,1543274504.112 [Depth_Keller] Loaded
2018-11-26T23:21:44.112Z,1543274504.112 [ComponentRegistry](DEBUG): SyncComponent "Depth_Keller" handled in the control thread.
2018-11-26T23:21:44.117Z,1543274504.117 [DropWeight] Loaded
2018-11-26T23:21:44.117Z,1543274504.117 [ComponentRegistry](DEBUG): SyncComponent "DropWeight" handled in the control thread.
2018-11-26T23:21:44.220Z,1543274504.220 [NAL9602] Loaded
2018-11-26T23:21:44.220Z,1543274504.220 [ComponentRegistry](DEBUG): SyncComponent "NAL9602" handled in the control thread.
2018-11-26T23:21:44.237Z,1543274504.237 [Onboard] Loaded
2018-11-26T23:21:44.237Z,1543274504.237 [ComponentRegistry](DEBUG): SyncComponent "Onboard" handled in the control thread.
2018-11-26T23:21:44.247Z,1543274504.247 [Radio_Surface] Loaded
2018-11-26T23:21:44.248Z,1543274504.248 [ComponentRegistry](DEBUG): Component "Radio_Surface" handled in its own thread.
2018-11-26T23:21:44.249Z,1543274504.249 [Radio_Surface ThreadHandler](DEBUG): Created PCaller Thread at 4088F4E0
2018-11-26T23:21:44.249Z,1543274504.249 [Radio_Surface ThreadHandler](INFO): Protected caller Thread ID is 882
2018-11-26T23:21:44.403Z,1543274504.403 [PNI_TCM] Loaded
2018-11-26T23:21:44.404Z,1543274504.404 [ComponentRegistry](DEBUG): SyncComponent "PNI_TCM" handled in the control thread.
2018-11-26T23:21:44.404Z,1543274504.404 [Module Loader](DEBUG): Loaded Module: Sensor (Contains the sensor components)
2018-11-26T23:21:44.405Z,1543274504.405 [Module Loader](DEBUG): Loading Module at Modules/BIT.so
2018-11-26T23:21:44.572Z,1543274504.572 [SBIT](DEBUG): Construct Startup Built In Test.
2018-11-26T23:21:44.594Z,1543274504.594 [SBIT] Loaded
2018-11-26T23:21:44.594Z,1543274504.594 [ComponentRegistry](DEBUG): SyncComponent "SBIT" handled in the control thread.
2018-11-26T23:21:44.595Z,1543274504.595 [IBIT](DEBUG): Construct Initiated Built In Test.
2018-11-26T23:21:44.607Z,1543274504.607 [IBIT] Loaded
2018-11-26T23:21:44.608Z,1543274504.608 [ComponentRegistry](DEBUG): SyncComponent "IBIT" handled in the control thread.
2018-11-26T23:21:44.611Z,1543274504.611 [CBIT](DEBUG): Construct Continuous Built In Test.
2018-11-26T23:21:45.013Z,1543274505.013 [CBIT] Loaded
2018-11-26T23:21:45.013Z,1543274505.013 [ComponentRegistry](DEBUG): SyncComponent "CBIT" handled in the control thread.
2018-11-26T23:21:45.014Z,1543274505.014 [Module Loader](DEBUG): Loaded Module: BIT (Contains the BuiltInTest components, such as C Built In Test)
2018-11-26T23:21:45.014Z,1543274505.014 [Module Loader](DEBUG): Loading Module at Modules/Science.so
2018-11-26T23:21:45.322Z,1543274505.322 [CTD_NeilBrown] Loaded
2018-11-26T23:21:45.323Z,1543274505.323 [ComponentRegistry](DEBUG): Component "CTD_NeilBrown" handled in its own thread.
2018-11-26T23:21:45.324Z,1543274505.324 [CTD_NeilBrown ThreadHandler](DEBUG): Created PCaller Thread at 4096E4E0
2018-11-26T23:21:45.324Z,1543274505.324 [CTD_NeilBrown ThreadHandler](INFO): Protected caller Thread ID is 883
2018-11-26T23:21:45.327Z,1543274505.327 [CTD_Seabird](CRITICAL): No configuration setting for: CTD_Seabird.offset
2018-11-26T23:21:45.401Z,1543274505.401 [CTD_Seabird] Loaded
2018-11-26T23:21:45.402Z,1543274505.402 [ComponentRegistry](DEBUG): Component "CTD_Seabird" handled in its own thread.
2018-11-26T23:21:45.403Z,1543274505.403 [CTD_Seabird ThreadHandler](DEBUG): Created PCaller Thread at 4099E4E0
2018-11-26T23:21:45.403Z,1543274505.403 [CTD_Seabird ThreadHandler](INFO): Protected caller Thread ID is 884
2018-11-26T23:21:45.418Z,1543274505.418 [PAR_Licor] Loaded
2018-11-26T23:21:45.418Z,1543274505.418 [ComponentRegistry](DEBUG): SyncComponent "PAR_Licor" handled in the control thread.
2018-11-26T23:21:45.468Z,1543274505.468 [WetLabsBB2FL] Loaded
2018-11-26T23:21:45.469Z,1543274505.469 [ComponentRegistry](DEBUG): Component "WetLabsBB2FL" handled in its own thread.
2018-11-26T23:21:45.470Z,1543274505.470 [WetLabsBB2FL ThreadHandler](DEBUG): Created PCaller Thread at 409CE4E0
2018-11-26T23:21:45.470Z,1543274505.470 [WetLabsBB2FL ThreadHandler](INFO): Protected caller Thread ID is 885
2018-11-26T23:21:45.471Z,1543274505.471 [Module Loader](DEBUG): Loaded Module: Science (Contains the science components)
2018-11-26T23:21:45.471Z,1543274505.471 [Module Loader](DEBUG): Loading Module at Modules/Control.so
2018-11-26T23:21:45.603Z,1543274505.603 [VerticalControl](DEBUG): Construct VerticalControl.
2018-11-26T23:21:45.751Z,1543274505.751 [VerticalControl] Loaded
2018-11-26T23:21:45.752Z,1543274505.752 [ComponentRegistry](DEBUG): SyncComponent "VerticalControl" handled in the control thread.
2018-11-26T23:21:45.752Z,1543274505.752 [HorizontalControl](DEBUG): Construct HorizontalControl.
2018-11-26T23:21:45.942Z,1543274505.942 [HorizontalControl] Loaded
2018-11-26T23:21:45.942Z,1543274505.942 [ComponentRegistry](DEBUG): SyncComponent "HorizontalControl" handled in the control thread.
2018-11-26T23:21:45.943Z,1543274505.943 [SpeedControl](DEBUG): Construct SpeedControl.
2018-11-26T23:21:45.944Z,1543274505.944 [SpeedControl] Loaded
2018-11-26T23:21:45.945Z,1543274505.945 [ComponentRegistry](DEBUG): SyncComponent "SpeedControl" handled in the control thread.
2018-11-26T23:21:45.945Z,1543274505.945 [LoopControl](DEBUG): Construct LoopControl.
2018-11-26T23:21:45.946Z,1543274505.946 [LoopControl] Loaded
2018-11-26T23:21:45.946Z,1543274505.946 [ComponentRegistry](DEBUG): SyncComponent "LoopControl" handled in the control thread.
2018-11-26T23:21:45.947Z,1543274505.947 [Module Loader](DEBUG): Loaded Module: Control (Contains the Control components, such as Depth, Heading, and Speed Control)
2018-11-26T23:21:45.947Z,1543274505.947 [Module Loader](DEBUG): Loading Module at Modules/Trigger.so
2018-11-26T23:21:46.049Z,1543274506.049 [Module Loader](DEBUG): Loaded Module: Trigger (Contains triggers for use in missions)
2018-11-26T23:21:46.050Z,1543274506.050 [Module Loader](DEBUG): Loading Module at Modules/Navigation.so
2018-11-26T23:21:46.168Z,1543274506.168 [DeadReckonUsingSpeedCalculator] Loaded
2018-11-26T23:21:46.168Z,1543274506.168 [ComponentRegistry](DEBUG): SyncComponent "DeadReckonUsingSpeedCalculator" handled in the control thread.
2018-11-26T23:21:46.185Z,1543274506.185 [NavChart] Loaded
2018-11-26T23:21:46.186Z,1543274506.186 [ComponentRegistry](DEBUG): SyncComponent "NavChart" handled in the control thread.
2018-11-26T23:21:46.190Z,1543274506.190 [UniversalFixResidualReporter] Loaded
2018-11-26T23:21:46.190Z,1543274506.190 [ComponentRegistry](DEBUG): SyncComponent "UniversalFixResidualReporter" handled in the control thread.
2018-11-26T23:21:46.190Z,1543274506.190 [Module Loader](DEBUG): Loaded Module: Navigation (Contains the base navigation components)
2018-11-26T23:21:46.194Z,1543274506.194 [ComponentRegistry](DEBUG): SyncComponent "MissionManager" handled in the control thread.
2018-11-26T23:21:46.195Z,1543274506.195 [ComponentRegistry](DEBUG): SyncComponent "Reporter" handled in the control thread.
2018-11-26T23:21:46.201Z,1543274506.201 [ComponentRegistry](DEBUG): Component "NavChartDb" handled in its own thread.
2018-11-26T23:21:46.202Z,1543274506.202 [NavChartDb ThreadHandler](DEBUG): Created PCaller Thread at 40A5A4E0
2018-11-26T23:21:46.203Z,1543274506.203 [NavChartDb ThreadHandler](INFO): Protected caller Thread ID is 886
2018-11-26T23:21:46.207Z,1543274506.207 [Supervisor](INFO): Main Thread ID is 796
2018-11-26T23:21:46.207Z,1543274506.207 [Supervisor](DEBUG): Running supervisor.
2018-11-26T23:21:46.208Z,1543274506.208 [CommandLine ThreadHandler](INFO): Handler Thread ID is 887
2018-11-26T23:21:46.210Z,1543274506.210 [controlThread ThreadHandler](INFO): Handler Thread ID is 888
2018-11-26T23:21:46.211Z,1543274506.211 [controlThread](DEBUG): Initializing ControlThread
2018-11-26T23:21:46.212Z,1543274506.212 [DepthRateCalculator](DEBUG): Initializing DepthRateCalculator.
2018-11-26T23:21:46.212Z,1543274506.212 [PitchRateCalculator](DEBUG): Initializing PitchRateCalculator.
2018-11-26T23:21:46.212Z,1543274506.212 [SpeedCalculator](DEBUG): Initializing SpeedCalculator.
2018-11-26T23:21:46.213Z,1543274506.213 [TempGradientCalculator](DEBUG): Initializing TempGradientCalculator.
2018-11-26T23:21:46.213Z,1543274506.213 [YawRateCalculator](DEBUG): Initializing YawRateCalculator.
2018-11-26T23:21:46.214Z,1543274506.214 [ElevatorOffsetCalculator](DEBUG): Initializing ElevatorOffsetCalculator.
2018-11-26T23:21:46.220Z,1543274506.220 [SBIT](INFO): Initialize SBIT Component.
2018-11-26T23:21:46.220Z,1543274506.220 [SBIT](IMPORTANT): git: 2018-11-05-23-gc670f65
2018-11-26T23:21:46.220Z,1543274506.220 [SBIT](INFO): git hash: c670f65e90afb3cd45868fc8f56def32ffac7cef
2018-11-26T23:21:46.221Z,1543274506.221 [SBIT](IMPORTANT): Kernel Release: 2.6.27.8
2018-11-26T23:21:46.221Z,1543274506.221 [SBIT](IMPORTANT): Kernel Version:#2 PREEMPT Thu Jan 11 20:13:48 PST 2018
2018-11-26T23:21:46.222Z,1543274506.222 [SBIT](INFO): Beginning SBIT in 36.000000 seconds.
2018-11-26T23:21:46.222Z,1543274506.222 [IBIT](INFO): Initialize IBIT Component.
2018-11-26T23:21:46.223Z,1543274506.223 [CBIT](DEBUG): Initialize CBIT Component.
2018-11-26T23:21:46.224Z,1543274506.224 [logger ThreadHandler](INFO): Handler Thread ID is 889
2018-11-26T23:21:46.237Z,1543274506.237 [CBIT](DEBUG): Initialized mux pins.
2018-11-26T23:21:46.238Z,1543274506.238 [CBIT](DEBUG): Initializing the watchdog timer.
2018-11-26T23:21:46.242Z,1543274506.242 [Radio_Surface ThreadHandler](INFO): Handler Thread ID is 890
2018-11-26T23:21:46.247Z,1543274506.247 [Radio_Surface](INFO): Powering up
2018-11-26T23:21:46.258Z,1543274506.258 [CTD_NeilBrown ThreadHandler](INFO): Handler Thread ID is 891
2018-11-26T23:21:46.259Z,1543274506.259 [CTD_NeilBrown](INFO): Powering down
2018-11-26T23:21:46.265Z,1543274506.265 [CBIT](INFO): Last reboot was NOT due to watchdog timer.
2018-11-26T23:21:46.266Z,1543274506.266 [CBIT](DEBUG): Initializing heartbeat.
2018-11-26T23:21:46.280Z,1543274506.280 [CTD_Seabird ThreadHandler](INFO): Handler Thread ID is 892
2018-11-26T23:21:46.281Z,1543274506.281 [CTD_Seabird](INFO): Start
2018-11-26T23:21:46.281Z,1543274506.281 [CTD_Seabird](DEBUG): Initializing CTD_Seabird.
2018-11-26T23:21:46.283Z,1543274506.283 [CTD_Seabird](INFO): Opening uart, block timeout 10ths=4
2018-11-26T23:21:46.288Z,1543274506.288 [CTD_Seabird](INFO): Starting
2018-11-26T23:21:46.306Z,1543274506.306 [WetLabsBB2FL ThreadHandler](INFO): Handler Thread ID is 894
2018-11-26T23:21:46.307Z,1543274506.307 [WetLabsBB2FL](INFO): Powering down
2018-11-26T23:21:46.326Z,1543274506.326 [CTD_Seabird](INFO): Pause
2018-11-26T23:21:46.337Z,1543274506.337 [CBIT](DEBUG): Deactivating GF circuits.
2018-11-26T23:21:46.338Z,1543274506.338 [CBIT](DEBUG): Deactivating emergency mode.
2018-11-26T23:21:46.346Z,1543274506.346 [NavChartDb ThreadHandler](INFO): Handler Thread ID is 895
2018-11-26T23:21:46.354Z,1543274506.354 [NavChartDb](INFO): Looking for Electronic Nav Chart file at: Resources/ElectronicNavigationCharts/US1WC07M.000
2018-11-26T23:21:46.354Z,1543274506.354 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US1WC07M.000
2018-11-26T23:21:46.355Z,1543274506.355 [NavChartDb](INFO): Looking for Electronic Nav Chart file at: Resources/ElectronicNavigationCharts/US2WC11M.000
2018-11-26T23:21:46.355Z,1543274506.355 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US2WC11M.000
2018-11-26T23:21:46.355Z,1543274506.355 [NavChartDb](INFO): Looking for Electronic Nav Chart file at: Resources/ElectronicNavigationCharts/US3CA52M.000
2018-11-26T23:21:46.355Z,1543274506.355 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US3CA52M.000
2018-11-26T23:21:46.355Z,1543274506.355 [NavChartDb](INFO): Looking for Electronic Nav Chart file at: Resources/ElectronicNavigationCharts/US4CA60M.000
2018-11-26T23:21:46.356Z,1543274506.356 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US4CA60M.000
2018-11-26T23:21:46.356Z,1543274506.356 [NavChartDb](INFO): Looking for Electronic Nav Chart file at: Resources/ElectronicNavigationCharts/US5CA50M.000
2018-11-26T23:21:46.356Z,1543274506.356 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA50M.000
2018-11-26T23:21:46.356Z,1543274506.356 [NavChartDb](INFO): Looking for Electronic Nav Chart file at: Resources/ElectronicNavigationCharts/US5CA61M.000
2018-11-26T23:21:46.356Z,1543274506.356 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA61M.000
2018-11-26T23:21:46.357Z,1543274506.357 [NavChartDb](INFO): Looking for Electronic Nav Chart file at: Resources/ElectronicNavigationCharts/US5CA62M.000
2018-11-26T23:21:46.357Z,1543274506.357 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA62M.000
2018-11-26T23:21:46.357Z,1543274506.357 [NavChartDb](INFO): Looking for Electronic Nav Chart file at: Resources/ElectronicNavigationCharts/US5CA83M.000
2018-11-26T23:21:46.357Z,1543274506.357 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA83M.000
2018-11-26T23:21:46.378Z,1543274506.378 [VerticalControl](DEBUG): Initialize VerticalControlComponent.
2018-11-26T23:21:46.380Z,1543274506.380 [HorizontalControl](DEBUG): Initialize HorizontalControlComponent.
2018-11-26T23:21:46.380Z,1543274506.380 [SpeedControl](DEBUG): Initialize SpeedControlComponent.
2018-11-26T23:21:46.381Z,1543274506.381 [LoopControl](DEBUG): Initialize LoopControlComponent.
2018-11-26T23:21:46.381Z,1543274506.381 [DeadReckonUsingSpeedCalculator](DEBUG): Initializing DeadReckonUsingSpeedCalculator component.
2018-11-26T23:21:46.382Z,1543274506.382 [DeadReckonUsingSpeedCalculator](INFO): Will consider orientation measurement stale after 120s.
2018-11-26T23:21:46.382Z,1543274506.382 [DeadReckonUsingSpeedCalculator](INFO): Will consider velocity measurement stale after 20s.
2018-11-26T23:21:46.383Z,1543274506.383 [NavChart](DEBUG): Initialize NavChart Navigation.
2018-11-26T23:21:46.383Z,1543274506.383 [UniversalFixResidualReporter](DEBUG): Initializing UniversalFixResidualReporter component.
2018-11-26T23:21:46.384Z,1543274506.384 [MissionManager](INFO): Loading Mission: Missions/Startup.xml
2018-11-26T23:21:46.415Z,1543274506.415 [Startup:A.GoToSurface](DEBUG): Construct GoToSurface.
2018-11-26T23:21:46.463Z,1543274506.463 [MissionManager](DEBUG):
2018-11-26T23:21:46.463Z,1543274506.463 [MissionManager](INFO): Loading Mission: Missions/Default.xml
2018-11-26T23:21:46.542Z,1543274506.542 [MissionManager](INFO): DefineArg Default.ElapsedSinceDefaultStarted = 0.000000 min
2018-11-26T23:21:46.543Z,1543274506.543 [Default:A.Wait](DEBUG): Construct Wait.
2018-11-26T23:21:46.545Z,1543274506.545 [Default:B.GoToSurface](DEBUG): Construct GoToSurface.
2018-11-26T23:21:46.580Z,1543274506.580 [Default:CheckIn:Read_Iridium:A_Timeout:A.Execute](DEBUG): Construct Execute.
2018-11-26T23:21:46.595Z,1543274506.595 [Default:CheckIn:C.Wait](DEBUG): Construct Wait.
2018-11-26T23:21:46.609Z,1543274506.609 [Default:E.Execute](DEBUG): Construct Execute.
2018-11-26T23:21:46.616Z,1543274506.616 [MissionManager](DEBUG):
0
Wait a moment to see if the scheduler starts a new mission before
starting to actually run Default.
13
Burn on
Dropped weight due to communications timeout.
5
Default mission has been running for
Restarting logs and Default mission.
restart logs
2018-11-26T23:21:46.621Z,1543274506.621 [controlThread](DEBUG): Component order: CycleStarter,DataOverHttps,Depth_Keller,DropWeight,NAL9602,Onboard,PNI_TCM,PAR_Licor,Depth_Keller,PAR_Licor,DepthRateCalculator,PitchRateCalculator,SpeedCalculator,TempGradientCalculator,YawRateCalculator,ElevatorOffsetCalculator,DeadReckonUsingSpeedCalculator,NavChart,UniversalFixResidualReporter,MissionManager,VerticalControl,HorizontalControl,SpeedControl,LoopControl,BuoyancyServo,ElevatorServo,MassServo,RudderServo,ThrusterServo,SBIT,IBIT,CBIT,Reporter,LogSplitter,
2018-11-26T23:21:46.646Z,1543274506.646 [DataOverHttps](DEBUG): dashIP=134.89.2.23 starts with a digit so assuming it is a numeric IP
2018-11-26T23:21:47.186Z,1543274507.186 [BuoyancyServo](DEBUG): Initializing EZServoServo.
2018-11-26T23:21:47.194Z,1543274507.194 [BuoyancyServo](DEBUG): Initializing BuoyancyServo.
2018-11-26T23:21:47.220Z,1543274507.220 [ElevatorServo](DEBUG): Initializing EZServoServo.
2018-11-26T23:21:47.226Z,1543274507.226 [ElevatorServo](DEBUG): Initializing ElevatorServo.
2018-11-26T23:21:47.231Z,1543274507.231 [MassServo](DEBUG): Initializing EZServoServo.
2018-11-26T23:21:47.238Z,1543274507.238 [MassServo](DEBUG): Initializing MassServo.
2018-11-26T23:21:47.243Z,1543274507.243 [RudderServo](DEBUG): Initializing EZServoServo.
2018-11-26T23:21:47.250Z,1543274507.250 [RudderServo](DEBUG): Initializing RudderServo.
2018-11-26T23:21:47.271Z,1543274507.271 [ThrusterServo](DEBUG): Initializing EZServoServo.
2018-11-26T23:21:47.278Z,1543274507.278 [ThrusterServo](DEBUG): Initializing ThrusterServo.
2018-11-26T23:21:47.318Z,1543274507.318 [CommandLine](FAULT): Scheduling is paused
2018-11-26T23:21:47.319Z,1543274507.319 [CBIT](INFO): Critical error at 20181126T232145
2018-11-26T23:21:47.319Z,1543274507.319 [Supervisor](INFO): Stop Mission called by CBIT::checkCriticals
2018-11-26T23:21:48.178Z,1543274508.178 [BuoyancyServo](ERROR): Buoyancy initialization uart error serial timeout
2018-11-26T23:21:48.178Z,1543274508.178 [BuoyancyServo](FAULT): Buoyancy failed to initialize
2018-11-26T23:21:48.178Z,1543274508.178 [BuoyancyServo] Communications Fault, FailCount= 1
2018-11-26T23:21:48.178Z,1543274508.178 [BuoyancyServo](ERROR): Communications Fault
2018-11-26T23:21:48.397Z,1543274508.397 [CBIT](ERROR): Communications Fault in component: BuoyancyServo
2018-11-26T23:21:50.586Z,1543274510.586 [CBIT](INFO): Clearing failed state for component BuoyancyServo
2018-11-26T23:21:50.586Z,1543274510.586 [BuoyancyServo] No Fault, FailCount= 1
2018-11-26T23:21:50.904Z,1543274510.904 [BuoyancyServo](DEBUG): Initializing EZServoServo.
2018-11-26T23:21:51.023Z,1543274511.023 [BuoyancyServo](DEBUG): Initializing BuoyancyServo.
2018-11-26T23:22:14.411Z,1543274534.411 [NAL9602](INFO): Powering up NAL9602
2018-11-26T23:22:22.893Z,1543274542.893 [SBIT](IMPORTANT): Beginning Startup BIT
2018-11-26T23:22:22.914Z,1543274542.914 [CBIT](IMPORTANT): Beginning ground fault scan
2018-11-26T23:22:25.859Z,1543274545.859 [NAL9602](INFO): NAL9602 initialized
2018-11-26T23:22:34.338Z,1543274554.338 [CBIT](IMPORTANT): No ground fault detected
mA:
CHAN A0 (Batt): -0.001581
CHAN A1 (24V): -0.005677
CHAN A2 (12V): -0.002032
CHAN A3 (5V): -0.001715
CHAN B0 (3.3V): 0.000184
CHAN B1 (3.15aV): -0.000051
CHAN B2 (3.15bV): -0.000540
CHAN B3 (GND): -0.000071
OPEN: -0.000632
Full Scale Calc: 4.765 mA, -1.589 mA
2018-11-26T23:23:16.701Z,1543274596.701 [SBIT](IMPORTANT): SBIT PASSED
2018-11-26T23:23:16.770Z,1543274596.770 [CommandLine](IMPORTANT): got command configSet list
2018-11-26T23:23:16.770Z,1543274596.770 [CommandLine](IMPORTANT): Listing configuration overrides from Data/persisted.cfg
2018-11-26T23:23:16.771Z,1543274596.771 [CommandLine](IMPORTANT): Aanderaa_O2.loadAtStartup=0 bool;
2018-11-26T23:23:16.771Z,1543274596.771 [CommandLine](IMPORTANT): BPC1.batteryMissingStickThreshold=28 count;
2018-11-26T23:23:16.771Z,1543274596.771 [CommandLine](IMPORTANT): BPC1.batteryMuxCycleTime=10 minute;
2018-11-26T23:23:16.771Z,1543274596.771 [CommandLine](IMPORTANT): BPC1.loadAtStartup=0 bool;
2018-11-26T23:23:16.771Z,1543274596.771 [CommandLine](IMPORTANT): CTD_Seabird.loadAtStartup=1 bool;
2018-11-26T23:23:16.771Z,1543274596.771 [CommandLine](IMPORTANT): Express none CTD_NeilBrown.bin_mean_sea_water_salinity;
2018-11-26T23:23:16.772Z,1543274596.772 [CommandLine](IMPORTANT): Express none CTD_NeilBrown.bin_mean_sea_water_temperature 0.150000 kelvin;
2018-11-26T23:23:16.772Z,1543274596.772 [CommandLine](IMPORTANT): Express linearApproximation CTD_NeilBrown.bin_median_sea_water_salinity 0.020000 practical_salinity_unit;
2018-11-26T23:23:16.772Z,1543274596.772 [CommandLine](IMPORTANT): Express linearApproximation CTD_NeilBrown.bin_median_sea_water_temperature 0.150000 kelvin;
2018-11-26T23:23:16.772Z,1543274596.772 [CommandLine](IMPORTANT): Express none VerticalTemperatureHomogeneityIndexCalculator.vertical_temperature_homogeneity_index;
2018-11-26T23:23:16.772Z,1543274596.772 [CommandLine](IMPORTANT): Express linearApproximation height_above_sea_floor 5.000000 meter;
2018-11-26T23:23:16.772Z,1543274596.772 [CommandLine](IMPORTANT): Rowe_600LCM.loadAtStartup=0 bool;
2018-11-26T23:23:16.772Z,1543274596.772 [CommandLine](IMPORTANT): VerticalControl.buoyancyNeutral=213 cubic_centimeter;
2018-11-26T23:23:16.772Z,1543274596.772 [CommandLine](IMPORTANT): VerticalControl.massDefault=4 millimeter;
2018-11-26T23:23:17.070Z,1543274597.070 [MissionManager](IMPORTANT): Started mission Startup
2018-11-26T23:23:17.071Z,1543274597.071 [Startup] Running Loop=1
2018-11-26T23:23:17.071Z,1543274597.071 [Startup](DEBUG): Aggregate::initialize Startup
2018-11-26T23:23:17.071Z,1543274597.071 [Startup:A.GoToSurface] Running Loop=1
2018-11-26T23:23:17.071Z,1543274597.071 [Startup:A.GoToSurface](DEBUG): Initialize GoToSurfaceComponent.
2018-11-26T23:23:17.072Z,1543274597.072 [Startup:A.GoToSurface](DEBUG): No depth rate setting specified. Using default value of nan m/s.
2018-11-26T23:23:17.072Z,1543274597.072 [Startup:A.GoToSurface](DEBUG): No pitch setting specified. Using default value of nan degrees.
2018-11-26T23:23:17.072Z,1543274597.072 [Startup:A.GoToSurface](DEBUG): No speed setting specified. Using default value of 1.000000 m/s.
2018-11-26T23:23:17.073Z,1543274597.073 [Startup:A.GoToSurface](DEBUG): No surface timeout specified. Using default value of 1000.000000 seconds.
2018-11-26T23:23:17.073Z,1543274597.073 [Startup:A.GoToSurface](INFO): Received pitch timeout configuration 60.000000 seconds.
2018-11-26T23:23:17.103Z,1543274597.103 [Startup:StartupSatComms] Running Loop=1
2018-11-26T23:23:17.104Z,1543274597.104 [Startup:StartupSatComms](DEBUG): Aggregate::initialize Startup:StartupSatComms
2018-11-26T23:23:17.104Z,1543274597.104 [Startup:StartupSatComms:A] Running Loop=1
2018-11-26T23:23:17.462Z,1543274597.462 [Startup:StartupSatComms:A](DEBUG): Initialize ReadDataComponent to sense latitude_fix
2018-11-26T23:24:17.282Z,1543274657.282 [CommandLine](IMPORTANT): got command show stack
2018-11-26T23:24:17.282Z,1543274657.282 [CommandLine](IMPORTANT): Behavior Stack:
2018-11-26T23:24:17.283Z,1543274657.283 [Startup](IMPORTANT): Priority 0: Startup:A.GoToSurface
2018-11-26T23:24:17.283Z,1543274657.283 [Startup:StartupSatComms](IMPORTANT): Priority 1: Startup:StartupSatComms:A
2018-11-26T23:24:18.636Z,1543274658.636 [Startup:StartupSatComms:A](INFO): Timed out from 2018-11-26T23:23:17.1Z
2018-11-26T23:24:18.636Z,1543274658.636 [Startup:StartupSatComms:A] Stopped
2018-11-26T23:24:18.636Z,1543274658.636 [Startup:StartupSatComms:B] Running Loop=1
2018-11-26T23:24:18.809Z,1543274658.809 [Startup:StartupSatComms:B](DEBUG): Initialize ReadDataComponent to sense platform_communications
2018-11-26T23:24:19.491Z,1543274659.491 [DataOverHttps](INFO): setting available, lastComms_.elapsed()=0.003951
2018-11-26T23:24:23.487Z,1543274663.487 [DataOverHttps](INFO): Sending 18 bytes from file Logs/20181126T230420/Courier0004.lzma
2018-11-26T23:24:24.288Z,1543274664.288 [DataOverHttps](INFO): Moved sent file to Logs/20181126T230420/Courier0004.lzma.bak
2018-11-26T23:24:24.288Z,1543274664.288 [DataOverHttps](INFO): SBD MOMSN=8923112
2018-11-26T23:24:33.050Z,1543274673.050 [DataOverHttps](INFO): Sending 18 bytes from file Logs/20181126T232000/Courier0000.lzma
2018-11-26T23:24:33.848Z,1543274673.848 [DataOverHttps](INFO): Moved sent file to Logs/20181126T232000/Courier0000.lzma.bak
2018-11-26T23:24:33.848Z,1543274673.848 [DataOverHttps](INFO): SBD MOMSN=8923114
2018-11-26T23:24:42.672Z,1543274682.672 [DataOverHttps](INFO): Sending 105 bytes from file Logs/20181126T232136/Courier0000.lzma
2018-11-26T23:24:43.472Z,1543274683.472 [DataOverHttps](INFO): Moved sent file to Logs/20181126T232136/Courier0000.lzma.bak
2018-11-26T23:24:43.472Z,1543274683.472 [DataOverHttps](INFO): SBD MOMSN=8923125
2018-11-26T23:24:47.431Z,1543274687.431 [DeadReckonUsingSpeedCalculator](ERROR): Will not write estimated position: latitudeAccuracy_ = nan, longitudeAccuracy_ = nan, depthAccuracy_ = nan
2018-11-26T23:24:47.432Z,1543274687.432 [DeadReckonUsingSpeedCalculator] Software Fault, FailCount= 1
2018-11-26T23:24:47.432Z,1543274687.432 [DeadReckonUsingSpeedCalculator](ERROR): Software Fault
2018-11-26T23:24:47.481Z,1543274687.481 [CBIT](ERROR): Software Fault in component: DeadReckonUsingSpeedCalculator
2018-11-26T23:24:47.582Z,1543274687.582 [CBIT](INFO): Clearing failed state for component DeadReckonUsingSpeedCalculator
2018-11-26T23:24:47.582Z,1543274687.582 [DeadReckonUsingSpeedCalculator] No Fault, FailCount= 1
2018-11-26T23:24:47.967Z,1543274687.967 [DeadReckonUsingSpeedCalculator](DEBUG): Initializing DeadReckonUsingSpeedCalculator component.
2018-11-26T23:24:47.967Z,1543274687.967 [DeadReckonUsingSpeedCalculator](INFO): Will consider orientation measurement stale after 120s.
2018-11-26T23:24:47.968Z,1543274687.968 [DeadReckonUsingSpeedCalculator](INFO): Will consider velocity measurement stale after 20s.
2018-11-26T23:24:52.297Z,1543274692.297 [DataOverHttps](INFO): Sending 18 bytes from file Logs/20181126T230420/Express0005.lzma
2018-11-26T23:24:53.096Z,1543274693.096 [DataOverHttps](INFO): Moved sent file to Logs/20181126T230420/Express0005.lzma.bak
2018-11-26T23:24:53.096Z,1543274693.096 [DataOverHttps](INFO): SBD MOMSN=8923166
2018-11-26T23:25:01.901Z,1543274701.901 [DataOverHttps](INFO): Sending 18 bytes from file Logs/20181126T232000/Express0001.lzma
2018-11-26T23:25:02.700Z,1543274702.700 [DataOverHttps](INFO): Moved sent file to Logs/20181126T232000/Express0001.lzma.bak
2018-11-26T23:25:02.700Z,1543274702.700 [DataOverHttps](INFO): SBD MOMSN=8923168
2018-11-26T23:25:11.475Z,1543274711.475 [DataOverHttps](INFO): Sending 1121 bytes from file Logs/20181126T232136/Express0001.lzma
2018-11-26T23:25:12.272Z,1543274712.272 [DataOverHttps](INFO): Moved sent file to Logs/20181126T232136/Express0001.lzma.bak
2018-11-26T23:25:12.272Z,1543274712.272 [DataOverHttps](INFO): SBD MOMSN=8923170
2018-11-26T23:25:12.801Z,1543274712.801 [Startup:StartupSatComms:B] Stopped
2018-11-26T23:25:12.801Z,1543274712.801 [Startup:StartupSatComms](INFO): Completed Startup:StartupSatComms
2018-11-26T23:25:12.801Z,1543274712.801 [Startup:StartupSatComms] Stopped
2018-11-26T23:25:12.801Z,1543274712.801 [Startup:StartupSatComms](DEBUG): Aggregate::uninitialize Startup:StartupSatComms
2018-11-26T23:25:12.807Z,1543274712.807 [Startup](INFO): Completed Startup
2018-11-26T23:25:12.807Z,1543274712.807 [MissionManager](INFO): Startup is completed.
2018-11-26T23:25:12.807Z,1543274712.807 [MissionManager](INFO): Uninitializing Mission Startup
2018-11-26T23:25:12.807Z,1543274712.807 [Startup] Stopped
2018-11-26T23:25:12.808Z,1543274712.808 [Startup](DEBUG): Aggregate::uninitialize Startup
2018-11-26T23:25:12.808Z,1543274712.808 [Startup:A.GoToSurface] Stopped
2018-11-26T23:25:12.808Z,1543274712.808 [Startup:A.GoToSurface](DEBUG): Uninitialize GoToSurfaceComponent.
2018-11-26T23:25:13.138Z,1543274713.138 [MissionManager](IMPORTANT): Started mission Default
2018-11-26T23:25:13.138Z,1543274713.138 [Default] Running Loop=1
2018-11-26T23:25:13.138Z,1543274713.138 [Default](DEBUG): Aggregate::initialize Default
2018-11-26T23:25:13.138Z,1543274713.138 [Default:B.GoToSurface] Running Loop=1
2018-11-26T23:25:13.138Z,1543274713.138 [Default:B.GoToSurface](DEBUG): Initialize GoToSurfaceComponent.
2018-11-26T23:25:13.138Z,1543274713.138 [Default:B.GoToSurface](DEBUG): No depth rate setting specified. Using default value of nan m/s.
2018-11-26T23:25:13.139Z,1543274713.139 [Default:B.GoToSurface](DEBUG): No pitch setting specified. Using default value of nan degrees.
2018-11-26T23:25:13.139Z,1543274713.139 [Default:B.GoToSurface](DEBUG): No speed setting specified. Using default value of 1.000000 m/s.
2018-11-26T23:25:13.139Z,1543274713.139 [Default:B.GoToSurface](DEBUG): No surface timeout specified. Using default value of 1000.000000 seconds.
2018-11-26T23:25:13.140Z,1543274713.140 [Default:B.GoToSurface](INFO): Received pitch timeout configuration 60.000000 seconds.
2018-11-26T23:25:13.140Z,1543274713.140 [Default:A.Wait] Running Loop=1
2018-11-26T23:25:13.140Z,1543274713.140 [Default:A.Wait](DEBUG): Initialize Wait Component.
2018-11-26T23:25:26.289Z,1543274726.289 [Default:A.Wait](INFO): Done Waiting.
2018-11-26T23:25:26.289Z,1543274726.289 [Default:A.Wait] Stopped
2018-11-26T23:25:26.289Z,1543274726.289 [Default:A.Wait](DEBUG): Uninitialize Wait Component.
2018-11-26T23:25:26.722Z,1543274726.722 [Default:CheckIn] Running Loop=1
2018-11-26T23:25:26.722Z,1543274726.722 [Default:CheckIn](DEBUG): Aggregate::initialize Default:CheckIn
2018-11-26T23:25:26.722Z,1543274726.722 [Default:CheckIn:Read_GPS] Running Loop=1
2018-11-26T23:25:27.103Z,1543274727.103 [Default:CheckIn:Read_GPS](DEBUG): Initialize ReadDataComponent to sense time_fix
2018-11-26T23:26:31.907Z,1543274791.907 [CommandLine](IMPORTANT): got command run ./Missions/Insert/Science.xml
2018-11-26T23:26:31.908Z,1543274791.908 [MissionManager](INFO): Loading Mission: ./Missions/Insert/Science.xml
2018-11-26T23:26:32.148Z,1543274792.148 [MissionManager](INFO): DefineArg Science.SampleISUS = 0 bool
2018-11-26T23:26:32.151Z,1543274792.151 [MissionManager](INFO): DefineArg Science.SampleISUSmaxPitch = 60.000000 arcdeg
2018-11-26T23:26:32.154Z,1543274792.154 [MissionManager](INFO): DefineArg Science.SampleISUSminPitch = -60.000000 arcdeg
2018-11-26T23:26:32.157Z,1543274792.157 [MissionManager](INFO): DefineArg Science.PeakDetectChlActive = 0 bool
2018-11-26T23:26:32.160Z,1543274792.160 [MissionManager](INFO): DefineArg Science.TimeWindowPeakReport = nan min
2018-11-26T23:26:32.163Z,1543274792.163 [MissionManager](INFO): DefineArg Science.HighestChlPeakReportActive = 0 bool
2018-11-26T23:26:32.166Z,1543274792.166 [MissionManager](INFO): DefineArg Science.PatchTracking = 0 bool
2018-11-26T23:26:32.169Z,1543274792.169 [MissionManager](INFO): DefineArg Science.FilterWidthHorizontal = 3.000000 count
2018-11-26T23:26:32.172Z,1543274792.172 [MissionManager](INFO): DefineArg Science.NumProfilesSlidingwindow = 100.000000 count
2018-11-26T23:26:32.195Z,1543274792.195 [MissionManager](INFO): DefineArg Science.OffPeakFractionHorizontal = 80.000000 %
2018-11-26T23:26:32.201Z,1543274792.201 [MissionManager](INFO): DefineArg Science.PeakDetectNO3Active = 0 bool
2018-11-26T23:26:32.220Z,1543274792.220 [MissionManager](INFO): DefineArg Science.PeakDetectOilActive = 0 bool
2018-11-26T23:26:32.227Z,1543274792.227 [MissionManager](INFO): DefineArg Science.PeakDetectFDOMActive = 0 bool
2018-11-26T23:26:32.236Z,1543274792.236 [MissionManager](INFO): DefineArg Science.UpwardDerivativeOfTemperatureActive = 0 bool
2018-11-26T23:26:32.263Z,1543274792.263 [MissionManager](INFO): DefineArg Science.EnabledAanderaaO2 = 0.000000 bool
2018-11-26T23:26:32.267Z,1543274792.267 [MissionManager](INFO): DefineArg Science.EnabledNeilBrown = 1.000000 bool
2018-11-26T23:26:32.299Z,1543274792.299 [MissionManager](INFO): DefineArg Science.EnabledSeabird = 1.000000 bool
2018-11-26T23:26:32.319Z,1543274792.319 [MissionManager](INFO): DefineArg Science.EnabledTurbulence_NPS = 0.000000 bool
2018-11-26T23:26:32.322Z,1543274792.322 [MissionManager](INFO): DefineArg Science.EnabledWetLabsBB2FL = 1.000000 bool
2018-11-26T23:26:32.331Z,1543274792.331 [MissionManager](INFO): DefineArg Science.EnabledWetLabsSeaOWL_UV_A = 0.000000 bool
2018-11-26T23:26:32.355Z,1543274792.355 [MissionManager](INFO): DefineArg Science.EnabledWetLabsUBAT = 0.000000 bool
2018-11-26T23:26:32.363Z,1543274792.363 [MissionManager](INFO): DefineArg Science.EnabledISUS = 0.000000 bool
2018-11-26T23:26:32.378Z,1543274792.378 [MissionManager](INFO): DefineArg Science.LowPassWindowLength = 20.000000 count
2018-11-26T23:26:32.386Z,1543274792.386 [MissionManager](INFO): DefineArg Science.PeakChlShallowBound = nan m
2018-11-26T23:26:32.394Z,1543274792.394 [MissionManager](INFO): DefineArg Science.PeakChlDeepBound = nan m
2018-11-26T23:26:32.400Z,1543274792.400 [MissionManager](INFO): DefineArg Science.PeakShallowBound = nan m
2018-11-26T23:26:32.403Z,1543274792.403 [MissionManager](INFO): DefineArg Science.PeakDeepBound = nan m
2018-11-26T23:26:32.412Z,1543274792.412 [MissionManager](INFO): DefineOutput Science.PeakChl = 0.000000 ug/l
2018-11-26T23:26:32.423Z,1543274792.423 [MissionManager](INFO): DefineOutput Science.PeakChlDepth = 0.000000 m
2018-11-26T23:26:32.427Z,1543274792.427 [MissionManager](INFO): DefineOutput Science.PeakChlTemperature = 0.000000 degC
2018-11-26T23:26:32.442Z,1543274792.442 [MissionManager](INFO): DefineOutput Science.PeakChlLatitude = nan arcdeg
2018-11-26T23:26:32.450Z,1543274792.450 [MissionManager](INFO): DefineOutput Science.PeakChlLongitude = nan arcdeg
2018-11-26T23:26:32.458Z,1543274792.458 [MissionManager](INFO): DefineOutput Science.PeakNO3 = 0.000000 umol/l
2018-11-26T23:26:32.466Z,1543274792.466 [MissionManager](INFO): DefineOutput Science.PeakNO3Depth = 0.000000 m
2018-11-26T23:26:32.478Z,1543274792.478 [MissionManager](INFO): DefineOutput Science.PeakNO3Latitude = nan arcdeg
2018-11-26T23:26:32.483Z,1543274792.483 [MissionManager](INFO): DefineOutput Science.PeakNO3Longitude = nan arcdeg
2018-11-26T23:26:32.495Z,1543274792.495 [MissionManager](INFO): DefineOutput Science.PatchChl = 0.000000 m
2018-11-26T23:26:32.499Z,1543274792.499 [MissionManager](INFO): DefineOutput Science.PatchChlDepth = 0.000000 m
2018-11-26T23:26:32.511Z,1543274792.511 [MissionManager](INFO): DefineOutput Science.PatchChlLatitude = nan arcdeg
2018-11-26T23:26:32.515Z,1543274792.515 [MissionManager](INFO): DefineOutput Science.PatchChlLongitude = nan arcdeg
2018-11-26T23:26:32.527Z,1543274792.527 [MissionManager](INFO): DefineOutput Science.PatchChlDistance = nan m
2018-11-26T23:26:32.538Z,1543274792.538 [MissionManager](INFO): DefineOutput Science.PeakOil = 0.000000 kg/m3
2018-11-26T23:26:32.546Z,1543274792.546 [MissionManager](INFO): DefineOutput Science.PeakOilDepth = 0.000000 m
2018-11-26T23:26:32.549Z,1543274792.549 [MissionManager](INFO): DefineOutput Science.PeakOilLatitude = nan arcdeg
2018-11-26T23:26:32.556Z,1543274792.556 [MissionManager](INFO): DefineOutput Science.PeakOilLongitude = nan arcdeg
2018-11-26T23:26:32.561Z,1543274792.561 [MissionManager](INFO): DefineOutput Science.PeakFDOM = 0.000000 ppb
2018-11-26T23:26:32.576Z,1543274792.576 [MissionManager](INFO): DefineOutput Science.PeakFDOMDepth = 0.000000 m
2018-11-26T23:26:32.580Z,1543274792.580 [MissionManager](INFO): DefineOutput Science.PeakFDOMLatitude = nan arcdeg
2018-11-26T23:26:32.591Z,1543274792.591 [MissionManager](INFO): DefineOutput Science.PeakFDOMLongitude = nan arcdeg
2018-11-26T23:26:32.603Z,1543274792.603 [MissionManager](INFO): DefineOutput Science.PatchFDOMDistance = nan m
2018-11-26T23:26:32.656Z,1543274792.656 [Science:PeakDetectChl:A.PeakDetectVsDepth](DEBUG): Construct PeakDetectVsDepth.
2018-11-26T23:26:32.708Z,1543274792.708 [Science:HighestChlPeakReport:A.PeakDetectHorizontal](DEBUG): Construct PeakDetectHorizontal.
2018-11-26T23:26:32.766Z,1543274792.766 [Science:PeakDetectNO3:A.PeakDetectVsDepth](DEBUG): Construct PeakDetectVsDepth.
2018-11-26T23:26:32.780Z,1543274792.780 [Science:PeakDetectOil:A.PeakDetectVsDepth](DEBUG): Construct PeakDetectVsDepth.
2018-11-26T23:26:32.807Z,1543274792.807 [Science:PeakDetectFDOM:A.PeakDetectVsDepth](DEBUG): Construct PeakDetectVsDepth.
2018-11-26T23:26:32.861Z,1543274792.861 [MissionManager](DEBUG):
Set either this or PeakDetectNO3Active to True in order to sample
Nitrate. EnabledISUS must also be true.
Maximum pitch to sample ISUS. (EnabledISUS must also be true.)
60.0
Minimum pitch to sample ISUS. (EnabledISUS must also be true.)
-60.0
Turns on peak detection of Cholorphyll.
If greater than zero, report a peak every window. If NaN or zero, this
variable is ignored.
NaN
Turns on reporting of the highest peak value on yo-yo profiles in a
horizontal sliding window (of length numProfilesSlidingwindow)
If tracking a patch
Width of boxcar filter applied to yoyo-wise chl peaks to pick out the
highest peak.
3
Length of horizontal sliding window. The highest yoyo-wise chl peak
(after low-pass filtering by a filter of length FilterWidthHorizontal)
within this window.
100
When filtered horizontal value is this fraction of the peak, consider it
outside the patch.
80
Turns on peak detection of Nitrate (and turns on ISUS).
Turns on peak detection of Dissolved Oil.
Turns on peak detection of concentration_of_colored_dissolved_organic_matter_in_sea_water_expressed_as_equivalent_mass_fraction_of_quinine_sulfate_dihydrate from FDOM sensor.
Turns on seawater temperature derivative.
Automatically set to True if the Aanderaa O2 sensor is installed. Set to
false to disable reading Aandera O2.
Automatically set to true if the Neil Brown CTD is enabled. Set to false
to disable reading from the Neil Brown.
Automatically set to true if the CTD is enabled. Set to false to disable
reading from the CTD.
Automatically set to true if the NPS Turbulence sensor is enabled. Set
to false to disable reading from the NPS Turbulence sensor.
Automatically set to true if the the WetLabs BB2FL is enabled. Set to
false to disable the WetLabs BB2FL.
Automatically set to true if the the WetLabs SeaOWL UV-A is enabled. Set
to false to disable the WetLabs SeaOWL UV-A.
Automatically set to true if the the WetLabs UBAT is enabled. Set
to false to disable the WetLabs UBAT.
Automatically set to True if ISUS is enabled. Set to false to disable
ISUS.
Low-pass window length (based on depth sensor sampling interval 0.4
second) for low-pass filtering.
20
Shallow depth bound for detecting chl peak on each descent or ascent
profile.
NaN
Deep depth bound for detecting chl peak on each descent or ascent
profile.
NaN
Shallow depth bound for detecting any peak on each descent or ascent
profile.
NaN
Deep depth bound for detecting any peak on each descent or ascent
profile.
NaN
0
0
0
NaN
NaN
0
0
NaN
NaN
0
0
NaN
NaN
NaN
0
0
NaN
NaN
0
0
NaN
NaN
NaN
2018-11-26T23:26:32.863Z,1543274792.863 [CommandLine](IMPORTANT): Running ./Missions/Insert/Science.xml
2018-11-26T23:26:33.133Z,1543274793.133 [Default] Stopped
2018-11-26T23:26:33.133Z,1543274793.133 [Default](DEBUG): Aggregate::uninitialize Default
2018-11-26T23:26:33.133Z,1543274793.133 [Default:B.GoToSurface] Stopped
2018-11-26T23:26:33.133Z,1543274793.133 [Default:B.GoToSurface](DEBUG): Uninitialize GoToSurfaceComponent.
2018-11-26T23:26:33.133Z,1543274793.133 [Default:CheckIn] Stopped
2018-11-26T23:26:33.133Z,1543274793.133 [Default:CheckIn](DEBUG): Aggregate::uninitialize Default:CheckIn
2018-11-26T23:26:33.133Z,1543274793.133 [Default:CheckIn:Read_GPS] Stopped
2018-11-26T23:26:33.134Z,1543274793.134 [MissionManager](IMPORTANT): Started mission Science
2018-11-26T23:26:33.134Z,1543274793.134 [Science] Running Loop=1
2018-11-26T23:26:33.134Z,1543274793.134 [Science](DEBUG): Aggregate::initialize Science
2018-11-26T23:26:33.134Z,1543274793.134 [Science:A] Running Loop=1
2018-11-26T23:26:33.134Z,1543274793.134 [Science:B] Running Loop=1
2018-11-26T23:26:33.134Z,1543274793.134 [Science:C] Running Loop=1
2018-11-26T23:26:33.134Z,1543274793.134 [Science:D] Running Loop=1
2018-11-26T23:26:33.134Z,1543274793.134 [Science:E] Running Loop=1
2018-11-26T23:26:33.134Z,1543274793.134 [Science:F] Running Loop=1
2018-11-26T23:26:33.134Z,1543274793.134 [Science:G] Running Loop=1
2018-11-26T23:26:33.134Z,1543274793.134 [Science:H] Running Loop=1
2018-11-26T23:26:33.134Z,1543274793.134 [Science:Read_Oil] Running Loop=1
2018-11-26T23:26:33.135Z,1543274793.135 [Science:PeakDetectChl] Running Loop=1
2018-11-26T23:26:33.135Z,1543274793.135 [Science:PeakDetectChl](DEBUG): Aggregate::initialize Science:PeakDetectChl
2018-11-26T23:26:33.135Z,1543274793.135 [Science:PeakDetectChl:A.PeakDetectVsDepth] Running Loop=1
2018-11-26T23:26:33.135Z,1543274793.135 [Science:PeakDetectChl:A.PeakDetectVsDepth](DEBUG): Initialize.
2018-11-26T23:26:33.137Z,1543274793.137 [Science:HighestChlPeakReport] Running Loop=1
2018-11-26T23:26:33.137Z,1543274793.137 [Science:HighestChlPeakReport](DEBUG): Aggregate::initialize Science:HighestChlPeakReport
2018-11-26T23:26:33.137Z,1543274793.137 [Science:HighestChlPeakReport:A.PeakDetectHorizontal] Running Loop=1
2018-11-26T23:26:33.137Z,1543274793.137 [Science:HighestChlPeakReport:A.PeakDetectHorizontal](INFO): Initialize.
2018-11-26T23:26:33.152Z,1543274793.152 [Science:PeakDetectNO3] Running Loop=1
2018-11-26T23:26:33.152Z,1543274793.152 [Science:PeakDetectNO3](DEBUG): Aggregate::initialize Science:PeakDetectNO3
2018-11-26T23:26:33.152Z,1543274793.152 [Science:PeakDetectNO3:A.PeakDetectVsDepth] Running Loop=1
2018-11-26T23:26:33.152Z,1543274793.152 [Science:PeakDetectNO3:A.PeakDetectVsDepth](DEBUG): Initialize.
2018-11-26T23:26:33.154Z,1543274793.154 [Science:PeakDetectOil] Running Loop=1
2018-11-26T23:26:33.154Z,1543274793.154 [Science:PeakDetectOil](DEBUG): Aggregate::initialize Science:PeakDetectOil
2018-11-26T23:26:33.155Z,1543274793.155 [Science:PeakDetectOil:A.PeakDetectVsDepth] Running Loop=1
2018-11-26T23:26:33.155Z,1543274793.155 [Science:PeakDetectOil:A.PeakDetectVsDepth](DEBUG): Initialize.
2018-11-26T23:26:33.157Z,1543274793.157 [Science:PeakDetectFDOM] Running Loop=1
2018-11-26T23:26:33.157Z,1543274793.157 [Science:PeakDetectFDOM](DEBUG): Aggregate::initialize Science:PeakDetectFDOM
2018-11-26T23:26:33.157Z,1543274793.157 [Science:PeakDetectFDOM:A.PeakDetectVsDepth] Running Loop=1
2018-11-26T23:26:33.157Z,1543274793.157 [Science:PeakDetectFDOM:A.PeakDetectVsDepth](DEBUG): Initialize.
2018-11-26T23:26:33.161Z,1543274793.161 [Science:PeakDetectFDOM] Stopped
2018-11-26T23:26:33.161Z,1543274793.161 [Science:PeakDetectFDOM](DEBUG): Aggregate::uninitialize Science:PeakDetectFDOM
2018-11-26T23:26:33.161Z,1543274793.161 [Science:PeakDetectFDOM:A.PeakDetectVsDepth] Stopped
2018-11-26T23:26:33.161Z,1543274793.161 [Science:PeakDetectFDOM:A.PeakDetectVsDepth](DEBUG): Uninitialize.
2018-11-26T23:26:33.161Z,1543274793.161 [Science:PeakDetectOil] Stopped
2018-11-26T23:26:33.161Z,1543274793.161 [Science:PeakDetectOil](DEBUG): Aggregate::uninitialize Science:PeakDetectOil
2018-11-26T23:26:33.161Z,1543274793.161 [Science:PeakDetectOil:A.PeakDetectVsDepth] Stopped
2018-11-26T23:26:33.161Z,1543274793.161 [Science:PeakDetectOil:A.PeakDetectVsDepth](DEBUG): Uninitialize.
2018-11-26T23:26:33.161Z,1543274793.161 [Science:PeakDetectNO3] Stopped
2018-11-26T23:26:33.161Z,1543274793.161 [Science:PeakDetectNO3](DEBUG): Aggregate::uninitialize Science:PeakDetectNO3
2018-11-26T23:26:33.162Z,1543274793.162 [Science:PeakDetectNO3:A.PeakDetectVsDepth] Stopped
2018-11-26T23:26:33.162Z,1543274793.162 [Science:PeakDetectNO3:A.PeakDetectVsDepth](DEBUG): Uninitialize.
2018-11-26T23:26:33.162Z,1543274793.162 [Science:HighestChlPeakReport] Stopped
2018-11-26T23:26:33.162Z,1543274793.162 [Science:HighestChlPeakReport](DEBUG): Aggregate::uninitialize Science:HighestChlPeakReport
2018-11-26T23:26:33.162Z,1543274793.162 [Science:HighestChlPeakReport:A.PeakDetectHorizontal] Stopped
2018-11-26T23:26:33.162Z,1543274793.162 [Science:HighestChlPeakReport:A.PeakDetectHorizontal](DEBUG): Uninitialize.
2018-11-26T23:26:33.162Z,1543274793.162 [Science:PeakDetectChl] Stopped
2018-11-26T23:26:33.162Z,1543274793.162 [Science:PeakDetectChl](DEBUG): Aggregate::uninitialize Science:PeakDetectChl
2018-11-26T23:26:33.162Z,1543274793.162 [Science:PeakDetectChl:A.PeakDetectVsDepth] Stopped
2018-11-26T23:26:33.162Z,1543274793.162 [Science:PeakDetectChl:A.PeakDetectVsDepth](DEBUG): Uninitialize.
2018-11-26T23:26:33.162Z,1543274793.162 [Science:Read_Oil] Stopped
2018-11-26T23:26:33.162Z,1543274793.162 [Science:H] Stopped
2018-11-26T23:26:33.162Z,1543274793.162 [Science:G] Running Loop=1
2018-11-26T23:26:33.163Z,1543274793.163 [Science:G](DEBUG): Initialize ReadDataComponent to sense mass_concentration_of_chlorophyll_in_sea_water
2018-11-26T23:26:33.165Z,1543274793.165 [Science:F] Stopped
2018-11-26T23:26:33.165Z,1543274793.165 [Science:E] Stopped
2018-11-26T23:26:33.165Z,1543274793.165 [Science:D] Running Loop=1
2018-11-26T23:26:33.190Z,1543274793.190 [Science:D](DEBUG): Initialize ReadDataComponent to sense CTD_Seabird.sea_water_temperature
2018-11-26T23:26:33.191Z,1543274793.191 [Science:D](DEBUG): Initialize ReadDataComponent to sense CTD_Seabird.sea_water_salinity
2018-11-26T23:26:33.193Z,1543274793.193 [Science:C] Running Loop=1
2018-11-26T23:26:33.193Z,1543274793.193 [Science:C](DEBUG): Initialize ReadDataComponent to sense sea_water_temperature
2018-11-26T23:26:33.194Z,1543274793.194 [Science:C](DEBUG): Initialize ReadDataComponent to sense sea_water_salinity
2018-11-26T23:26:33.195Z,1543274793.195 [Science:B] Stopped
2018-11-26T23:26:33.195Z,1543274793.195 [Science:A] Stopped
2018-11-26T23:26:33.206Z,1543274793.206 [CTD_NeilBrown](DEBUG): Initializing CTD_NeilBrown.
2018-11-26T23:26:33.214Z,1543274793.214 [CTD_NeilBrown](INFO): Opening uart, block timeout 10ths=4
2018-11-26T23:26:33.224Z,1543274793.224 [WetLabsBB2FL](INFO): Opening uart, block timeout 10ths=2
2018-11-26T23:26:33.224Z,1543274793.224 [WetLabsBB2FL](INFO): Powering up
2018-11-26T23:26:33.886Z,1543274793.886 [CTD_Seabird](INFO): Resume
2018-11-26T23:26:33.894Z,1543274793.894 [CTD_Seabird](INFO): Opening uart, block timeout 10ths=4
2018-11-26T23:26:33.894Z,1543274793.894 [CTD_Seabird](INFO): Resuming
2018-11-26T23:26:38.442Z,1543274798.442 [WetLabsBB2FL] Communications Fault, FailCount= 1
2018-11-26T23:26:38.442Z,1543274798.442 [WetLabsBB2FL](ERROR): Communications Fault
2018-11-26T23:26:38.735Z,1543274798.735 [CBIT](ERROR): Communications Fault in component: WetLabsBB2FL
2018-11-26T23:26:38.946Z,1543274798.946 [WetLabsBB2FL](INFO): Powering down
2018-11-26T23:26:39.097Z,1543274799.097 [PNI_TCM](FAULT): Failed to acquire valid data within timeout.
2018-11-26T23:26:39.098Z,1543274799.098 [PNI_TCM] Data Fault, FailCount= 1
2018-11-26T23:26:39.098Z,1543274799.098 [PNI_TCM](ERROR): Data Fault
2018-11-26T23:26:39.128Z,1543274799.128 [CBIT](ERROR): Data Fault in component: PNI_TCM
2018-11-26T23:26:39.478Z,1543274799.478 [PNI_TCM](INFO): Powering down
2018-11-26T23:26:40.290Z,1543274800.290 [CBIT](INFO): Clearing failed state for component WetLabsBB2FL
2018-11-26T23:26:40.290Z,1543274800.290 [WetLabsBB2FL] No Fault, FailCount= 1
2018-11-26T23:26:40.375Z,1543274800.375 [CTD_NeilBrown](FAULT): Failed to acquire real or simulated CTD data within timeout.
2018-11-26T23:26:40.375Z,1543274800.375 [CTD_NeilBrown] Communications Fault, FailCount= 1
2018-11-26T23:26:40.375Z,1543274800.375 [CTD_NeilBrown](ERROR): Communications Fault
2018-11-26T23:26:40.695Z,1543274800.695 [CBIT](INFO): Clearing failed state for component PNI_TCM
2018-11-26T23:26:40.695Z,1543274800.695 [PNI_TCM] No Fault, FailCount= 1
2018-11-26T23:26:40.695Z,1543274800.695 [CBIT](ERROR): Communications Fault in component: CTD_NeilBrown
2018-11-26T23:26:40.763Z,1543274800.763 [WetLabsBB2FL](INFO): Opening uart, block timeout 10ths=2
2018-11-26T23:26:40.763Z,1543274800.763 [WetLabsBB2FL](INFO): Powering up
2018-11-26T23:26:40.922Z,1543274800.922 [CTD_Seabird](FAULT): Failed to acquire real or simulated CTD data within timeout.
2018-11-26T23:26:40.922Z,1543274800.922 [CTD_Seabird] Communications Fault, FailCount= 1
2018-11-26T23:26:40.922Z,1543274800.922 [CTD_Seabird](ERROR): Communications Fault
2018-11-26T23:26:40.982Z,1543274800.982 [CTD_NeilBrown](INFO): Powering down
2018-11-26T23:26:41.095Z,1543274801.095 [CBIT](ERROR): Communications Fault in component: CTD_Seabird
2018-11-26T23:26:42.305Z,1543274802.305 [CBIT](INFO): Clearing failed state for component CTD_NeilBrown
2018-11-26T23:26:42.305Z,1543274802.305 [CTD_NeilBrown] No Fault, FailCount= 1
2018-11-26T23:26:42.330Z,1543274802.330 [CTD_Seabird](INFO): Stop
2018-11-26T23:26:42.330Z,1543274802.330 [CTD_Seabird](INFO): Powering down
2018-11-26T23:26:42.331Z,1543274802.331 [CTD_NeilBrown](DEBUG): Initializing CTD_NeilBrown.
2018-11-26T23:26:42.334Z,1543274802.334 [CTD_NeilBrown](INFO): Opening uart, block timeout 10ths=4
2018-11-26T23:26:43.870Z,1543274803.870 [CTD_Seabird](INFO): Stopping
2018-11-26T23:26:44.274Z,1543274804.274 [CTD_Seabird](INFO): Start
2018-11-26T23:26:44.274Z,1543274804.274 [CTD_Seabird](DEBUG): Initializing CTD_Seabird.
2018-11-26T23:26:44.275Z,1543274804.275 [CTD_Seabird](INFO): Opening uart, block timeout 10ths=4
2018-11-26T23:26:44.350Z,1543274804.350 [CBIT](INFO): Clearing failed state for component CTD_Seabird
2018-11-26T23:26:44.350Z,1543274804.350 [CTD_Seabird] No Fault, FailCount= 1
2018-11-26T23:26:44.678Z,1543274804.678 [CTD_Seabird](INFO): Starting
2018-11-26T23:26:47.691Z,1543274807.691 [CTD_Seabird](INFO): Got valid response. Skip count: 0.
2018-11-26T23:26:47.691Z,1543274807.691 [CTD_Seabird](INFO): Got valid response. Skip count: 1.
2018-11-26T23:26:47.693Z,1543274807.693 [CTD_Seabird](INFO): Got valid response. Skip count: 2.
2018-11-26T23:26:48.695Z,1543274808.695 [CTD_Seabird](INFO): Got valid response. Skip count: 0.
2018-11-26T23:26:48.695Z,1543274808.695 [CTD_Seabird](INFO): Processing string: 0.11, 18.6878, 2.19334, 0.00
2018-11-26T23:26:48.696Z,1543274808.696 [CTD_Seabird](INFO): Processing token 0: 0.11
2018-11-26T23:26:48.696Z,1543274808.696 [CTD_Seabird](INFO): Processing token 1: 18.6878
2018-11-26T23:26:48.697Z,1543274808.697 [CTD_Seabird](INFO): Processing token 2: 2.19334
2018-11-26T23:26:48.697Z,1543274808.697 [CTD_Seabird](INFO): Processing token 3: 0.00
2018-11-26T23:26:48.698Z,1543274808.698 [CTD_Seabird](ERROR): Bad response: 0.11
2018-11-26T23:26:49.699Z,1543274809.699 [CTD_Seabird](INFO): Got valid response. Skip count: 0.
2018-11-26T23:26:49.699Z,1543274809.699 [CTD_Seabird](INFO): Processing string: 0.11, 18.6872, 4.50632, 0.00
2018-11-26T23:26:49.700Z,1543274809.700 [CTD_Seabird](INFO): Processing token 0: 0.11
2018-11-26T23:26:49.700Z,1543274809.700 [CTD_Seabird](INFO): Processing token 1: 18.6872
2018-11-26T23:26:49.700Z,1543274809.700 [CTD_Seabird](INFO): Processing token 2: 4.50632
2018-11-26T23:26:49.701Z,1543274809.701 [CTD_Seabird](INFO): Processing token 3: 0.00
2018-11-26T23:26:49.701Z,1543274809.701 [CTD_Seabird](ERROR): Bad response: 0.11
2018-11-26T23:26:50.704Z,1543274810.704 [CTD_Seabird](INFO): Got valid response. Skip count: 0.
2018-11-26T23:26:50.704Z,1543274810.704 [CTD_Seabird](INFO): Processing string: 0.11, 18.6870, 4.50637, 0.00
2018-11-26T23:26:50.705Z,1543274810.705 [CTD_Seabird](INFO): Processing token 0: 0.11
2018-11-26T23:26:50.705Z,1543274810.705 [CTD_Seabird](INFO): Processing token 1: 18.6870
2018-11-26T23:26:50.706Z,1543274810.706 [CTD_Seabird](INFO): Processing token 2: 4.50637
2018-11-26T23:26:50.707Z,1543274810.707 [CTD_Seabird](INFO): Processing token 3: 0.00
2018-11-26T23:26:50.707Z,1543274810.707 [CTD_Seabird](ERROR): Bad response: 0.11
2018-11-26T23:26:51.708Z,1543274811.708 [CTD_Seabird](INFO): Got valid response. Skip count: 0.
2018-11-26T23:26:51.708Z,1543274811.708 [CTD_Seabird](INFO): Processing string: 0.11, 18.6870, 4.50635, 0.00
2018-11-26T23:26:51.709Z,1543274811.709 [CTD_Seabird](INFO): Processing token 0: 0.11
2018-11-26T23:26:51.709Z,1543274811.709 [CTD_Seabird](INFO): Processing token 1: 18.6870
2018-11-26T23:26:51.710Z,1543274811.710 [CTD_Seabird](INFO): Processing token 2: 4.50635
2018-11-26T23:26:51.710Z,1543274811.710 [CTD_Seabird](INFO): Processing token 3: 0.00
2018-11-26T23:26:51.710Z,1543274811.710 [CTD_Seabird](ERROR): Bad response: 0.11
2018-11-26T23:26:51.711Z,1543274811.711 [CTD_Seabird](FAULT): Failed to acquire real or simulated CTD data within timeout.
2018-11-26T23:26:51.711Z,1543274811.711 [CTD_Seabird] Communications Fault, FailCount= 2
2018-11-26T23:26:51.711Z,1543274811.711 [CTD_Seabird](ERROR): Communications Fault
2018-11-26T23:26:51.922Z,1543274811.922 [CBIT](ERROR): Communications Fault in component: CTD_Seabird
2018-11-26T23:26:53.114Z,1543274813.114 [CTD_Seabird](INFO): Stop
2018-11-26T23:26:53.114Z,1543274813.114 [CTD_Seabird](INFO): Powering down
2018-11-26T23:26:54.653Z,1543274814.653 [CTD_Seabird](INFO): Stopping
2018-11-26T23:26:55.059Z,1543274815.059 [CTD_Seabird](INFO): Start
2018-11-26T23:26:55.059Z,1543274815.059 [CTD_Seabird](DEBUG): Initializing CTD_Seabird.
2018-11-26T23:26:55.060Z,1543274815.060 [CTD_Seabird](INFO): Opening uart, block timeout 10ths=4
2018-11-26T23:26:55.142Z,1543274815.142 [CBIT](INFO): Clearing failed state for component CTD_Seabird
2018-11-26T23:26:55.142Z,1543274815.142 [CTD_Seabird] No Fault, FailCount= 2
2018-11-26T23:26:55.462Z,1543274815.462 [CTD_Seabird](INFO): Starting
2018-11-26T23:26:58.495Z,1543274818.495 [CTD_Seabird](INFO): Got valid response. Skip count: 0.
2018-11-26T23:26:58.495Z,1543274818.495 [CTD_Seabird](INFO): Got valid response. Skip count: 1.
2018-11-26T23:26:58.497Z,1543274818.497 [CTD_Seabird](INFO): Got valid response. Skip count: 2.
2018-11-26T23:26:59.499Z,1543274819.499 [CTD_Seabird](INFO): Got valid response. Skip count: 0.
2018-11-26T23:26:59.500Z,1543274819.500 [CTD_Seabird](INFO): Processing string: 0.11, 18.6885, 0.30880, 0.00
2018-11-26T23:26:59.500Z,1543274819.500 [CTD_Seabird](INFO): Processing token 0: 0.11
2018-11-26T23:26:59.500Z,1543274819.500 [CTD_Seabird](INFO): Processing token 1: 18.6885
2018-11-26T23:26:59.501Z,1543274819.501 [CTD_Seabird](INFO): Processing token 2: 0.30880
2018-11-26T23:26:59.501Z,1543274819.501 [CTD_Seabird](INFO): Processing token 3: 0.00
2018-11-26T23:26:59.501Z,1543274819.501 [CTD_Seabird](ERROR): Bad response: 0.11
2018-11-26T23:27:00.503Z,1543274820.503 [CTD_Seabird](INFO): Got valid response. Skip count: 0.
2018-11-26T23:27:00.503Z,1543274820.503 [CTD_Seabird](INFO): Processing string: 0.11, 18.6871, 4.50635, 0.00
2018-11-26T23:27:00.504Z,1543274820.504 [CTD_Seabird](INFO): Processing token 0: 0.11
2018-11-26T23:27:00.504Z,1543274820.504 [CTD_Seabird](INFO): Processing token 1: 18.6871
2018-11-26T23:27:00.504Z,1543274820.504 [CTD_Seabird](INFO): Processing token 2: 4.50635
2018-11-26T23:27:00.505Z,1543274820.505 [CTD_Seabird](INFO): Processing token 3: 0.00
2018-11-26T23:27:00.505Z,1543274820.505 [CTD_Seabird](ERROR): Bad response: 0.11
2018-11-26T23:27:01.507Z,1543274821.507 [CTD_Seabird](INFO): Got valid response. Skip count: 0.
2018-11-26T23:27:01.507Z,1543274821.507 [CTD_Seabird](INFO): Processing string: 0.11, 18.6870, 4.50641, 0.00
2018-11-26T23:27:01.508Z,1543274821.508 [CTD_Seabird](INFO): Processing token 0: 0.11
2018-11-26T23:27:01.508Z,1543274821.508 [CTD_Seabird](INFO): Processing token 1: 18.6870
2018-11-26T23:27:01.508Z,1543274821.508 [CTD_Seabird](INFO): Processing token 2: 4.50641
2018-11-26T23:27:01.509Z,1543274821.509 [CTD_Seabird](INFO): Processing token 3: 0.00
2018-11-26T23:27:01.509Z,1543274821.509 [CTD_Seabird](ERROR): Bad response: 0.11
2018-11-26T23:27:02.511Z,1543274822.511 [CTD_Seabird](INFO): Got valid response. Skip count: 0.
2018-11-26T23:27:02.511Z,1543274822.511 [CTD_Seabird](INFO): Processing string: 0.11, 18.6867, 4.50644, 0.00
2018-11-26T23:27:02.512Z,1543274822.512 [CTD_Seabird](INFO): Processing token 0: 0.11
2018-11-26T23:27:02.512Z,1543274822.512 [CTD_Seabird](INFO): Processing token 1: 18.6867
2018-11-26T23:27:02.512Z,1543274822.512 [CTD_Seabird](INFO): Processing token 2: 4.50644
2018-11-26T23:27:02.513Z,1543274822.513 [CTD_Seabird](INFO): Processing token 3: 0.00
2018-11-26T23:27:02.513Z,1543274822.513 [CTD_Seabird](ERROR): Bad response: 0.11
2018-11-26T23:27:02.513Z,1543274822.513 [CTD_Seabird](FAULT): Failed to acquire real or simulated CTD data within timeout.
2018-11-26T23:27:02.513Z,1543274822.513 [CTD_Seabird] Communications Fault, FailCount= 3
2018-11-26T23:27:02.513Z,1543274822.513 [CTD_Seabird](ERROR): Communications Fault
2018-11-26T23:27:02.728Z,1543274822.728 [CBIT](ERROR): Communications Fault in component: CTD_Seabird
2018-11-26T23:27:02.729Z,1543274822.729 [CBIT](FAULT): Communications Fault in component: CTD_Seabird
2018-11-26T23:27:03.926Z,1543274823.926 [CTD_Seabird](INFO): Stop
2018-11-26T23:27:03.926Z,1543274823.926 [CTD_Seabird](INFO): Powering down
2018-11-26T23:27:05.466Z,1543274825.466 [CTD_Seabird](INFO): Stopping
2018-11-26T23:27:05.870Z,1543274825.870 [CTD_Seabird](INFO): Start
2018-11-26T23:27:05.870Z,1543274825.870 [CTD_Seabird](DEBUG): Initializing CTD_Seabird.
2018-11-26T23:27:05.871Z,1543274825.871 [CTD_Seabird](INFO): Opening uart, block timeout 10ths=4
2018-11-26T23:27:09.768Z,1543274829.768 [CommandLine](IMPORTANT): got command stop
2018-11-26T23:27:09.768Z,1543274829.768 [CommandLine](IMPORTANT): Scheduling is paused
2018-11-26T23:27:09.768Z,1543274829.768 [Supervisor](INFO): Stop Mission called by CommandLine::commandStop
2018-11-26T23:27:09.949Z,1543274829.949 [MissionManager](INFO): MissionManager is completed.
2018-11-26T23:27:09.958Z,1543274829.958 [MissionManager](INFO): Uninitializing Mission Science
2018-11-26T23:27:09.958Z,1543274829.958 [Science] Stopped
2018-11-26T23:27:09.958Z,1543274829.958 [Science](DEBUG): Aggregate::uninitialize Science
2018-11-26T23:27:09.958Z,1543274829.958 [Science:C] Stopped
2018-11-26T23:27:09.958Z,1543274829.958 [Science:D] Stopped
2018-11-26T23:27:09.958Z,1543274829.958 [Science:G] Stopped
2018-11-26T23:27:10.094Z,1543274830.094 [WetLabsBB2FL](INFO): Powering down
2018-11-26T23:27:10.312Z,1543274830.312 [MissionManager](IMPORTANT): Started mission Default
2018-11-26T23:27:10.312Z,1543274830.312 [Default] Running Loop=1
2018-11-26T23:27:10.312Z,1543274830.312 [Default](DEBUG): Aggregate::initialize Default
2018-11-26T23:27:10.313Z,1543274830.313 [Default:B.GoToSurface] Running Loop=1
2018-11-26T23:27:10.313Z,1543274830.313 [Default:B.GoToSurface](DEBUG): Initialize GoToSurfaceComponent.
2018-11-26T23:27:10.313Z,1543274830.313 [Default:B.GoToSurface](DEBUG): No depth rate setting specified. Using default value of nan m/s.
2018-11-26T23:27:10.314Z,1543274830.314 [Default:B.GoToSurface](DEBUG): No pitch setting specified. Using default value of nan degrees.
2018-11-26T23:27:10.314Z,1543274830.314 [Default:B.GoToSurface](DEBUG): No speed setting specified. Using default value of 1.000000 m/s.
2018-11-26T23:27:10.314Z,1543274830.314 [Default:B.GoToSurface](DEBUG): No surface timeout specified. Using default value of 1000.000000 seconds.
2018-11-26T23:27:10.315Z,1543274830.315 [Default:B.GoToSurface](INFO): Received pitch timeout configuration 60.000000 seconds.
2018-11-26T23:27:10.316Z,1543274830.316 [Default:A.Wait] Running Loop=1
2018-11-26T23:27:10.316Z,1543274830.316 [Default:A.Wait](DEBUG): Initialize Wait Component.
2018-11-26T23:27:23.506Z,1543274843.506 [Default:A.Wait](INFO): Done Waiting.
2018-11-26T23:27:23.506Z,1543274843.506 [Default:A.Wait] Stopped
2018-11-26T23:27:23.506Z,1543274843.506 [Default:A.Wait](DEBUG): Uninitialize Wait Component.
2018-11-26T23:27:23.916Z,1543274843.916 [Default:CheckIn] Running Loop=1
2018-11-26T23:27:23.916Z,1543274843.916 [Default:CheckIn](DEBUG): Aggregate::initialize Default:CheckIn
2018-11-26T23:27:23.917Z,1543274843.917 [Default:CheckIn:Read_GPS] Running Loop=1
2018-11-26T23:27:29.059Z,1543274849.059 [NAL9602](FAULT): MT Queue status failed to be acquired within timeout. Will not retry this session.
2018-11-26T23:27:35.864Z,1543274855.864 [NAL9602](INFO): GPS fix at 20181126T232400: (36.802791, -121.787945)
2018-11-26T23:27:35.929Z,1543274855.929 [Default:CheckIn:Read_GPS] Stopped
2018-11-26T23:27:35.929Z,1543274855.929 [Default:CheckIn:Read_Iridium] Running Loop=1
2018-11-26T23:27:36.367Z,1543274856.367 [Default:CheckIn:Read_Iridium](DEBUG): Initialize ReadDataComponent to sense platform_communications
2018-11-26T23:27:42.390Z,1543274862.390 [DataOverHttps](INFO): Sending 212 bytes from file Logs/20181126T232136/Courier0004.lzma
2018-11-26T23:27:43.167Z,1543274863.167 [DataOverHttps](INFO): Moved sent file to Logs/20181126T232136/Courier0004.lzma.bak
2018-11-26T23:27:43.168Z,1543274863.168 [DataOverHttps](INFO): SBD MOMSN=8923203
2018-11-26T23:27:52.986Z,1543274872.986 [DataOverHttps](INFO): Sending 753 bytes from file Logs/20181126T232136/Express0005.lzma
2018-11-26T23:27:53.732Z,1543274873.732 [DataOverHttps](INFO): Moved sent file to Logs/20181126T232136/Express0005.lzma.bak
2018-11-26T23:27:53.732Z,1543274873.732 [DataOverHttps](INFO): SBD MOMSN=8923206
2018-11-26T23:27:54.265Z,1543274874.265 [Default:CheckIn:Read_Iridium] Stopped
2018-11-26T23:27:54.266Z,1543274874.266 [Default:CheckIn:C.Wait] Running Loop=1
2018-11-26T23:27:54.266Z,1543274874.266 [Default:CheckIn:C.Wait](DEBUG): Initialize Wait Component.
2018-11-26T23:28:12.643Z,1543274892.643 [NAL9602](INFO): Powering down
2018-11-26T23:29:32.877Z,1543274972.877 [CBIT](INFO): Clearing failed state for component CTD_Seabird
2018-11-26T23:29:32.877Z,1543274972.877 [CTD_Seabird] No Fault, FailCount= 3
2018-11-26T23:29:32.966Z,1543274972.966 [CTD_Seabird](INFO): Starting
2018-11-26T23:29:32.971Z,1543274972.971 [CTD_Seabird](INFO): Pause
2018-11-26T23:31:40.606Z,1543275100.606 [CommandLine](IMPORTANT): got command restart application
2018-11-26T23:31:41.620Z,1543275101.620 [CommandLine ThreadHandler](INFO): Uninitializing protected caller thread.
2018-11-26T23:31:41.621Z,1543275101.621 [CommandLine ThreadHandler](INFO): Thread cancelled.
2018-11-26T23:31:41.621Z,1543275101.621 [Supervisor](DEBUG): Uninitializing supervisor and starting cleanup. Bye!
2018-11-26T23:31:41.622Z,1543275101.622 [CommandLine ThreadHandler](INFO): Thread cancelled.
2018-11-26T23:31:41.622Z,1543275101.622 [CommandLine](INFO): Join timeout helper Thread ID is 945
2018-11-26T23:31:41.634Z,1543275101.634 [ComponentRegistry](INFO): Shutting down NavChartDb ThreadHandler
2018-11-26T23:31:41.634Z,1543275101.634 [NavChartDb ThreadHandler](INFO): Thread cancelled.
2018-11-26T23:31:41.635Z,1543275101.635 [NavChartDb](INFO): Join timeout helper Thread ID is 946
2018-11-26T23:31:41.654Z,1543275101.654 [NavChartDb ThreadHandler](INFO): Uninitializing protected caller thread.
2018-11-26T23:31:41.654Z,1543275101.654 [NavChartDb ThreadHandler](INFO): Thread cancelled.
2018-11-26T23:31:41.661Z,1543275101.661 [ComponentRegistry](INFO): Shutting down WetLabsBB2FL ThreadHandler
2018-11-26T23:31:41.662Z,1543275101.662 [WetLabsBB2FL ThreadHandler](INFO): Thread cancelled.
2018-11-26T23:31:41.662Z,1543275101.662 [WetLabsBB2FL](INFO): Join timeout helper Thread ID is 947
2018-11-26T23:31:41.894Z,1543275101.894 [WetLabsBB2FL ThreadHandler](INFO): Uninitializing protected caller thread.
2018-11-26T23:31:41.894Z,1543275101.894 [WetLabsBB2FL](INFO): Powering down
2018-11-26T23:31:41.895Z,1543275101.895 [WetLabsBB2FL ThreadHandler](INFO): Thread cancelled.
2018-11-26T23:31:41.905Z,1543275101.905 [ComponentRegistry](INFO): Shutting down CTD_Seabird ThreadHandler
2018-11-26T23:31:41.906Z,1543275101.906 [CTD_Seabird ThreadHandler](INFO): Thread cancelled.
2018-11-26T23:31:41.906Z,1543275101.906 [CTD_Seabird](INFO): Join timeout helper Thread ID is 948
2018-11-26T23:31:42.638Z,1543275102.638 [CTD_Seabird ThreadHandler](INFO): Uninitializing protected caller thread.
2018-11-26T23:31:42.638Z,1543275102.638 [CTD_Seabird](INFO): Powering down
2018-11-26T23:31:42.650Z,1543275102.650 [CTD_Seabird ThreadHandler](INFO): Thread cancelled.
2018-11-26T23:31:42.657Z,1543275102.657 [ComponentRegistry](INFO): Shutting down CTD_NeilBrown ThreadHandler
2018-11-26T23:31:42.658Z,1543275102.658 [CTD_NeilBrown ThreadHandler](INFO): Thread cancelled.
2018-11-26T23:31:42.658Z,1543275102.658 [CTD_NeilBrown](INFO): Join timeout helper Thread ID is 949
2018-11-26T23:31:42.746Z,1543275102.746 [CTD_NeilBrown ThreadHandler](INFO): Uninitializing protected caller thread.
2018-11-26T23:31:42.746Z,1543275102.746 [CTD_NeilBrown](INFO): Powering down
2018-11-26T23:31:42.758Z,1543275102.758 [CTD_NeilBrown ThreadHandler](INFO): Thread cancelled.
2018-11-26T23:31:42.762Z,1543275102.762 [ComponentRegistry](INFO): Shutting down Radio_Surface ThreadHandler
2018-11-26T23:31:42.762Z,1543275102.762 [Radio_Surface ThreadHandler](INFO): Thread cancelled.
2018-11-26T23:31:42.763Z,1543275102.763 [Radio_Surface](INFO): Join timeout helper Thread ID is 950
2018-11-26T23:31:42.946Z,1543275102.946 [Radio_Surface ThreadHandler](INFO): Uninitializing protected caller thread.
2018-11-26T23:31:42.946Z,1543275102.946 [Radio_Surface ThreadHandler](INFO): Thread cancelled.
2018-11-26T23:31:42.958Z,1543275102.958 [ComponentRegistry](INFO): Shutting down logger ThreadHandler
2018-11-26T23:31:42.959Z,1543275102.959 [logger ThreadHandler](INFO): Thread cancelled.
2018-11-26T23:31:42.959Z,1543275102.959 [logger](INFO): Join timeout helper Thread ID is 951
2018-11-26T23:31:42.981Z,1543275102.981 [logger ThreadHandler](INFO): Uninitializing protected caller thread.
2018-11-26T23:31:42.986Z,1543275102.986 [logger ThreadHandler](INFO): Thread cancelled.
2018-11-26T23:31:42.994Z,1543275102.994 [ComponentRegistry](INFO): Shutting down CommandLine ThreadHandler
2018-11-26T23:31:42.994Z,1543275102.994 [CommandLine ThreadHandler](INFO): Thread cancelled.
2018-11-26T23:31:42.995Z,1543275102.995 [ComponentRegistry](INFO): Shutting down controlThread ThreadHandler
2018-11-26T23:31:42.995Z,1543275102.995 [controlThread ThreadHandler](INFO): Thread cancelled.
2018-11-26T23:31:42.995Z,1543275102.995 [controlThread](INFO): Join timeout helper Thread ID is 952
2018-11-26T23:31:43.302Z,1543275103.302 [controlThread ThreadHandler](INFO): Uninitializing protected caller thread.
2018-11-26T23:31:43.302Z,1543275103.302 [controlThread](DEBUG): Uninitializing ControlThread
2018-11-26T23:31:43.303Z,1543275103.303 [NAL9602](INFO): Powering down
2018-11-26T23:31:43.304Z,1543275103.304 [PNI_TCM](INFO): Powering down
2018-11-26T23:31:43.390Z,1543275103.390 [DepthRateCalculator](DEBUG): Uninitializing DepthRateCalculator.
2018-11-26T23:31:43.391Z,1543275103.391 [ElevatorOffsetCalculator](DEBUG): Uninitializing ElevatorOffsetCalculator.
2018-11-26T23:31:43.392Z,1543275103.392 [NavChart](DEBUG): Uninitialize NavChart Navigation.
2018-11-26T23:31:43.392Z,1543275103.392 [MissionManager](INFO): Uninitializing Mission Default
2018-11-26T23:31:43.392Z,1543275103.392 [Default] Stopped
2018-11-26T23:31:43.392Z,1543275103.392 [Default](DEBUG): Aggregate::uninitialize Default
2018-11-26T23:31:43.392Z,1543275103.392 [Default:B.GoToSurface] Stopped
2018-11-26T23:31:43.392Z,1543275103.392 [Default:B.GoToSurface](DEBUG): Uninitialize GoToSurfaceComponent.
2018-11-26T23:31:43.393Z,1543275103.393 [Default:CheckIn] Stopped
2018-11-26T23:31:43.393Z,1543275103.393 [Default:CheckIn](DEBUG): Aggregate::uninitialize Default:CheckIn
2018-11-26T23:31:43.393Z,1543275103.393 [Default:CheckIn:C.Wait] Stopped
2018-11-26T23:31:43.393Z,1543275103.393 [Default:CheckIn:C.Wait](DEBUG): Uninitialize Wait Component.
2018-11-26T23:31:43.396Z,1543275103.396 [VerticalControl](DEBUG): Uninitialize VerticalControlComponent.
2018-11-26T23:31:43.396Z,1543275103.396 [HorizontalControl](DEBUG): Uninitialize HorizontalControlComponent.
2018-11-26T23:31:43.396Z,1543275103.396 [SpeedControl](DEBUG): Uninitialize SpeedControlComponent.
2018-11-26T23:31:43.396Z,1543275103.396 [LoopControl](DEBUG): Uninitialize LoopControlComponent.
2018-11-26T23:31:43.397Z,1543275103.397 [BuoyancyServo](DEBUG): Uninitialize Buoyancy Servo.
2018-11-26T23:31:43.397Z,1543275103.397 [BuoyancyServo](INFO): Powering down
2018-11-26T23:31:43.410Z,1543275103.410 [ElevatorServo](DEBUG): Uninitialize Elevator Servo.
2018-11-26T23:31:43.410Z,1543275103.410 [ElevatorServo](INFO): Powering down
2018-11-26T23:31:43.410Z,1543275103.411 [MassServo](DEBUG): Uninitialize Mass Servo.
2018-11-26T23:31:43.411Z,1543275103.411 [MassServo](INFO): Powering down
2018-11-26T23:31:43.411Z,1543275103.411 [RudderServo](DEBUG): Uninitialize Rudder Servo.
2018-11-26T23:31:43.411Z,1543275103.411 [RudderServo](INFO): Powering down
2018-11-26T23:31:43.412Z,1543275103.412 [ThrusterServo](DEBUG): Uninitialize Thruster Servo.
2018-11-26T23:31:43.412Z,1543275103.412 [ThrusterServo](INFO): Powering down
2018-11-26T23:31:43.413Z,1543275103.413 [SBIT](DEBUG): Uninitialize SBIT Component.
2018-11-26T23:31:43.414Z,1543275103.414 [IBIT](DEBUG): Uninitialize IBIT Component.
2018-11-26T23:31:43.414Z,1543275103.414 [CBIT](DEBUG): Uninitialize CBIT Component.
2018-11-26T23:31:43.414Z,1543275103.414 [CBIT](DEBUG): Powering off loads.
2018-11-26T23:31:43.425Z,1543275103.425 [CBIT](DEBUG): Disabling WDT.
2018-11-26T23:31:43.437Z,1543275103.437 [CBIT](DEBUG): Opening all GF detection circuits.
2018-11-26T23:31:43.438Z,1543275103.438 [controlThread ThreadHandler](INFO): Thread cancelled.
2018-11-26T23:31:43.492Z,1543275103.492 [Radio_Surface ThreadHandler](INFO): Thread cancelled.
2018-11-26T23:31:43.531Z,1543275103.531 [WetLabsBB2FL ThreadHandler](INFO): Thread cancelled.
2018-11-26T23:31:43.534Z,1543275103.534 [CTD_Seabird ThreadHandler](INFO): Thread cancelled.
2018-11-26T23:31:43.537Z,1543275103.537 [CTD_NeilBrown ThreadHandler](INFO): Thread cancelled.
2018-11-26T23:31:43.567Z,1543275103.567 [NavChartDb ThreadHandler](INFO): Thread cancelled.
2018-11-26T23:31:43.633Z,1543275103.633 [logger ThreadHandler](INFO): Thread cancelled.