2018-11-26T23:20:00.406Z,1543274400.406 [Supervisor](DEBUG): Initializing supervisor.
2018-11-26T23:20:00.409Z,1543274400.409 [SyncHandler](DEBUG): Created PCaller Thread at 404514E0
2018-11-26T23:20:00.409Z,1543274400.409 [SyncHandler](INFO): Protected caller Thread ID is 800
2018-11-26T23:20:00.410Z,1543274400.410 [ComponentRegistry](DEBUG): Component "controlThread" handled in its own thread.
2018-11-26T23:20:00.410Z,1543274400.410 [controlThread ThreadHandler](DEBUG): Created PCaller Thread at 404814E0
2018-11-26T23:20:00.411Z,1543274400.411 [controlThread ThreadHandler](INFO): Protected caller Thread ID is 801
2018-11-26T23:20:00.413Z,1543274400.413 [ComponentRegistry](DEBUG): SyncComponent "CycleStarter" handled in the control thread.
2018-11-26T23:20:00.425Z,1543274400.425 [ComponentRegistry](DEBUG): Component "CommandLine" handled in its own thread.
2018-11-26T23:20:00.426Z,1543274400.426 [CommandLine ThreadHandler](DEBUG): Created PCaller Thread at 404B14E0
2018-11-26T23:20:00.426Z,1543274400.426 [CommandLine ThreadHandler](INFO): Protected caller Thread ID is 802
2018-11-26T23:20:00.427Z,1543274400.427 [ComponentRegistry](DEBUG): Component "logger" handled in its own thread.
2018-11-26T23:20:00.428Z,1543274400.428 [logger ThreadHandler](DEBUG): Created PCaller Thread at 404E14E0
2018-11-26T23:20:00.428Z,1543274400.428 [logger ThreadHandler](INFO): Protected caller Thread ID is 803
2018-11-26T23:20:00.430Z,1543274400.430 [ComponentRegistry](DEBUG): SyncComponent "LogSplitter" handled in the control thread.
2018-11-26T23:20:00.430Z,1543274400.430 [Supervisor](INFO): Looking for Config files in directory: Config/
2018-11-26T23:20:00.435Z,1543274400.435 [Supervisor](INFO): Opening Config file at: Config/Control.cfg
2018-11-26T23:20:00.754Z,1543274400.754 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Control
2018-11-26T23:20:00.756Z,1543274400.756 [Supervisor](INFO): Opening Config file at: Config/logger.cfg
2018-11-26T23:20:00.945Z,1543274400.945 [ComponentRegistry](DEBUG): Loaded Config Component "Config/logger
2018-11-26T23:20:00.945Z,1543274400.945 [Supervisor](INFO): Opening Config file at: Config/Servo.cfg
2018-11-26T23:20:01.230Z,1543274401.230 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Servo
2018-11-26T23:20:01.230Z,1543274401.230 [Supervisor](INFO): Opening Config file at: Config/Derivation.cfg
2018-11-26T23:20:01.373Z,1543274401.373 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Derivation
2018-11-26T23:20:01.375Z,1543274401.375 [Supervisor](INFO): Opening Config file at: Config/Sample.cfg
2018-11-26T23:20:01.473Z,1543274401.473 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Sample
2018-11-26T23:20:01.474Z,1543274401.474 [Supervisor](INFO): Opening Config file at: Config/Simulator.cfg
2018-11-26T23:20:01.930Z,1543274401.930 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Simulator
2018-11-26T23:20:01.931Z,1543274401.931 [Supervisor](INFO): Opening Config file at: Config/Sensor.cfg
2018-11-26T23:20:02.386Z,1543274402.386 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Sensor
2018-11-26T23:20:02.387Z,1543274402.387 [Supervisor](INFO): Opening Config file at: Config/vehicle.cfg
2018-11-26T23:20:02.840Z,1543274402.840 [ComponentRegistry](DEBUG): Loaded Config Component "Config/vehicle
2018-11-26T23:20:02.842Z,1543274402.842 [Supervisor](INFO): Opening Config file at: Config/workSite.cfg
2018-11-26T23:20:02.946Z,1543274402.946 [ComponentRegistry](DEBUG): Loaded Config Component "Config/workSite
2018-11-26T23:20:02.946Z,1543274402.946 [Supervisor](INFO): Opening Config file at: Config/secure.cfg
2018-11-26T23:20:03.043Z,1543274403.043 [ComponentRegistry](DEBUG): Loaded Config Component "Config/secure
2018-11-26T23:20:03.045Z,1543274403.045 [Supervisor](INFO): Opening Config file at: Config/Navigation.cfg
2018-11-26T23:20:03.260Z,1543274403.260 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Navigation
2018-11-26T23:20:03.262Z,1543274403.262 [Supervisor](INFO): Opening Config file at: Config/BIT.cfg
2018-11-26T23:20:03.460Z,1543274403.460 [ComponentRegistry](DEBUG): Loaded Config Component "Config/BIT
2018-11-26T23:20:03.462Z,1543274403.462 [Supervisor](INFO): Opening Config file at: Config/Science.cfg
2018-11-26T23:20:03.819Z,1543274403.819 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Science
2018-11-26T23:20:03.820Z,1543274403.820 [Supervisor](INFO): Opening Config file at: Config/Estimation.cfg
2018-11-26T23:20:03.963Z,1543274403.963 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Estimation
2018-11-26T23:20:03.965Z,1543274403.965 [Supervisor](INFO): Opening Config file at: Config/Guidance.cfg
2018-11-26T23:20:04.050Z,1543274404.050 [Supervisor](INFO): Looking for Config files in directory: Config/lrauv-daphne/
2018-11-26T23:20:04.307Z,1543274404.307 [Supervisor](INFO): Opening Config file at: Config/lrauv-daphne/Control.cfg
2018-11-26T23:20:04.700Z,1543274404.700 [Supervisor](INFO): Opening Config file at: Config/lrauv-daphne/logger.cfg
2018-11-26T23:20:04.950Z,1543274404.950 [Supervisor](INFO): Opening Config file at: Config/lrauv-daphne/Servo.cfg
2018-11-26T23:20:05.044Z,1543274405.044 [Supervisor](INFO): Opening Config file at: Config/lrauv-daphne/Simulator.cfg
2018-11-26T23:20:05.129Z,1543274405.129 [Supervisor](INFO): Opening Config file at: Config/lrauv-daphne/Sensor.cfg
2018-11-26T23:20:05.288Z,1543274405.288 [Supervisor](INFO): Opening Config file at: Config/lrauv-daphne/vehicle.cfg
2018-11-26T23:20:05.464Z,1543274405.464 [Supervisor](INFO): Opening Config file at: Config/lrauv-daphne/workSite.cfg
2018-11-26T23:20:05.541Z,1543274405.541 [Supervisor](INFO): Opening Config file at: Config/lrauv-daphne/Battery.cfg
2018-11-26T23:20:05.767Z,1543274405.767 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Battery
2018-11-26T23:20:05.768Z,1543274405.768 [Supervisor](INFO): Opening Config file at: Config/lrauv-daphne/secure.cfg
2018-11-26T23:20:05.851Z,1543274405.851 [Supervisor](INFO): Opening Config file at: Config/lrauv-daphne/Navigation.cfg
2018-11-26T23:20:05.940Z,1543274405.940 [Supervisor](INFO): Opening Config file at: Config/lrauv-daphne/BIT.cfg
2018-11-26T23:20:06.039Z,1543274406.039 [Supervisor](INFO): Opening Config file at: Config/lrauv-daphne/Science.cfg
2018-11-26T23:20:06.165Z,1543274406.165 [Supervisor](FAULT): Ignoring configuration overrides from Data/persisted.cfg
2018-11-26T23:20:06.169Z,1543274406.169 [Module Loader](DEBUG): Loading Module at Modules/Guidance.so
2018-11-26T23:20:06.447Z,1543274406.447 [Module Loader](DEBUG): Loaded Module: Guidance (Contains behaviors and commands)
2018-11-26T23:20:06.448Z,1543274406.448 [Module Loader](DEBUG): Loading Module at Modules/Derivation.so
2018-11-26T23:20:06.504Z,1543274406.504 [DepthRateCalculator] Loaded
2018-11-26T23:20:06.505Z,1543274406.505 [ComponentRegistry](DEBUG): SyncComponent "DepthRateCalculator" handled in the control thread.
2018-11-26T23:20:06.511Z,1543274406.511 [PitchRateCalculator] Loaded
2018-11-26T23:20:06.511Z,1543274406.511 [ComponentRegistry](DEBUG): SyncComponent "PitchRateCalculator" handled in the control thread.
2018-11-26T23:20:06.526Z,1543274406.526 [SpeedCalculator] Loaded
2018-11-26T23:20:06.527Z,1543274406.527 [ComponentRegistry](DEBUG): SyncComponent "SpeedCalculator" handled in the control thread.
2018-11-26T23:20:06.547Z,1543274406.547 [TempGradientCalculator] Loaded
2018-11-26T23:20:06.548Z,1543274406.548 [ComponentRegistry](DEBUG): SyncComponent "TempGradientCalculator" handled in the control thread.
2018-11-26T23:20:06.553Z,1543274406.553 [YawRateCalculator] Loaded
2018-11-26T23:20:06.553Z,1543274406.553 [ComponentRegistry](DEBUG): SyncComponent "YawRateCalculator" handled in the control thread.
2018-11-26T23:20:06.592Z,1543274406.592 [ElevatorOffsetCalculator] Loaded
2018-11-26T23:20:06.593Z,1543274406.593 [ComponentRegistry](DEBUG): SyncComponent "ElevatorOffsetCalculator" handled in the control thread.
2018-11-26T23:20:06.593Z,1543274406.593 [Module Loader](DEBUG): Loaded Module: Derivation (Contains the base derivation components)
2018-11-26T23:20:06.594Z,1543274406.594 [Module Loader](DEBUG): Loading Module at Modules/Estimation.so
2018-11-26T23:20:06.696Z,1543274406.696 [Module Loader](DEBUG): Loaded Module: Estimation (Contains the base estimation components)
2018-11-26T23:20:06.698Z,1543274406.698 [Module Loader](DEBUG): Loading Module at Modules/Servo.so
2018-11-26T23:20:06.842Z,1543274406.842 [BuoyancyServo] Loaded
2018-11-26T23:20:06.842Z,1543274406.842 [ComponentRegistry](DEBUG): SyncComponent "BuoyancyServo" handled in the control thread.
2018-11-26T23:20:06.857Z,1543274406.857 [ElevatorServo] Loaded
2018-11-26T23:20:06.857Z,1543274406.857 [ComponentRegistry](DEBUG): SyncComponent "ElevatorServo" handled in the control thread.
2018-11-26T23:20:06.871Z,1543274406.871 [MassServo] Loaded
2018-11-26T23:20:06.872Z,1543274406.872 [ComponentRegistry](DEBUG): SyncComponent "MassServo" handled in the control thread.
2018-11-26T23:20:06.887Z,1543274406.887 [RudderServo] Loaded
2018-11-26T23:20:06.887Z,1543274406.887 [ComponentRegistry](DEBUG): SyncComponent "RudderServo" handled in the control thread.
2018-11-26T23:20:06.900Z,1543274406.900 [ThrusterServo] Loaded
2018-11-26T23:20:06.901Z,1543274406.901 [ComponentRegistry](DEBUG): SyncComponent "ThrusterServo" handled in the control thread.
2018-11-26T23:20:06.901Z,1543274406.901 [Module Loader](DEBUG): Loaded Module: Servo (This is the module containing motor controllers)
2018-11-26T23:20:06.902Z,1543274406.902 [Module Loader](DEBUG): Loading Module at Modules/Sample.so
2018-11-26T23:20:06.925Z,1543274406.925 [Module Loader](DEBUG): Loaded Module: Sample (This is a Sample Module of Sample Components)
2018-11-26T23:20:06.926Z,1543274406.926 [Module Loader](DEBUG): Loading Module at Modules/Simulator.so
2018-11-26T23:20:07.051Z,1543274407.051 [Module Loader](DEBUG): Loaded Module: Simulator (This is the module containing the Simulator)
2018-11-26T23:20:07.052Z,1543274407.052 [Module Loader](DEBUG): Loading Module at Modules/Sensor.so
2018-11-26T23:20:07.617Z,1543274407.617 [DataOverHttps] Loaded
2018-11-26T23:20:07.617Z,1543274407.617 [ComponentRegistry](DEBUG): SyncComponent "DataOverHttps" handled in the control thread.
2018-11-26T23:20:07.631Z,1543274407.631 [Depth_Keller] Loaded
2018-11-26T23:20:07.632Z,1543274407.632 [ComponentRegistry](DEBUG): SyncComponent "Depth_Keller" handled in the control thread.
2018-11-26T23:20:07.637Z,1543274407.637 [DropWeight] Loaded
2018-11-26T23:20:07.637Z,1543274407.637 [ComponentRegistry](DEBUG): SyncComponent "DropWeight" handled in the control thread.
2018-11-26T23:20:07.734Z,1543274407.734 [NAL9602] Loaded
2018-11-26T23:20:07.734Z,1543274407.734 [ComponentRegistry](DEBUG): SyncComponent "NAL9602" handled in the control thread.
2018-11-26T23:20:07.750Z,1543274407.750 [Onboard] Loaded
2018-11-26T23:20:07.750Z,1543274407.750 [ComponentRegistry](DEBUG): SyncComponent "Onboard" handled in the control thread.
2018-11-26T23:20:07.760Z,1543274407.760 [Radio_Surface] Loaded
2018-11-26T23:20:07.760Z,1543274407.760 [ComponentRegistry](DEBUG): Component "Radio_Surface" handled in its own thread.
2018-11-26T23:20:07.761Z,1543274407.761 [Radio_Surface ThreadHandler](DEBUG): Created PCaller Thread at 4088F4E0
2018-11-26T23:20:07.762Z,1543274407.762 [Radio_Surface ThreadHandler](INFO): Protected caller Thread ID is 885
2018-11-26T23:20:07.913Z,1543274407.913 [PNI_TCM] Loaded
2018-11-26T23:20:07.913Z,1543274407.913 [ComponentRegistry](DEBUG): SyncComponent "PNI_TCM" handled in the control thread.
2018-11-26T23:20:07.972Z,1543274407.972 [Rowe_600LCM] Loaded
2018-11-26T23:20:07.972Z,1543274407.972 [ComponentRegistry](DEBUG): Component "Rowe_600LCM" handled in its own thread.
2018-11-26T23:20:07.973Z,1543274407.973 [Rowe_600LCM ThreadHandler](DEBUG): Created PCaller Thread at 408BF4E0
2018-11-26T23:20:07.974Z,1543274407.974 [Rowe_600LCM ThreadHandler](INFO): Protected caller Thread ID is 886
2018-11-26T23:20:07.974Z,1543274407.974 [Module Loader](DEBUG): Loaded Module: Sensor (Contains the sensor components)
2018-11-26T23:20:07.975Z,1543274407.975 [Module Loader](DEBUG): Loading Module at Modules/BIT.so
2018-11-26T23:20:08.133Z,1543274408.133 [SBIT](DEBUG): Construct Startup Built In Test.
2018-11-26T23:20:08.155Z,1543274408.155 [SBIT] Loaded
2018-11-26T23:20:08.155Z,1543274408.155 [ComponentRegistry](DEBUG): SyncComponent "SBIT" handled in the control thread.
2018-11-26T23:20:08.156Z,1543274408.156 [IBIT](DEBUG): Construct Initiated Built In Test.
2018-11-26T23:20:08.168Z,1543274408.168 [IBIT] Loaded
2018-11-26T23:20:08.168Z,1543274408.168 [ComponentRegistry](DEBUG): SyncComponent "IBIT" handled in the control thread.
2018-11-26T23:20:08.171Z,1543274408.171 [CBIT](DEBUG): Construct Continuous Built In Test.
2018-11-26T23:20:08.548Z,1543274408.548 [CBIT] Loaded
2018-11-26T23:20:08.549Z,1543274408.549 [ComponentRegistry](DEBUG): SyncComponent "CBIT" handled in the control thread.
2018-11-26T23:20:08.549Z,1543274408.549 [Module Loader](DEBUG): Loaded Module: BIT (Contains the BuiltInTest components, such as C Built In Test)
2018-11-26T23:20:08.550Z,1543274408.550 [Module Loader](DEBUG): Loading Module at Modules/Science.so
2018-11-26T23:20:08.775Z,1543274408.775 [Aanderaa_O2] Loaded
2018-11-26T23:20:08.775Z,1543274408.775 [ComponentRegistry](DEBUG): SyncComponent "Aanderaa_O2" handled in the control thread.
2018-11-26T23:20:08.857Z,1543274408.857 [CTD_NeilBrown] Loaded
2018-11-26T23:20:08.858Z,1543274408.858 [ComponentRegistry](DEBUG): Component "CTD_NeilBrown" handled in its own thread.
2018-11-26T23:20:08.859Z,1543274408.859 [CTD_NeilBrown ThreadHandler](DEBUG): Created PCaller Thread at 4099E4E0
2018-11-26T23:20:08.859Z,1543274408.859 [CTD_NeilBrown ThreadHandler](INFO): Protected caller Thread ID is 887
2018-11-26T23:20:08.862Z,1543274408.862 [CTD_Seabird](CRITICAL): No configuration setting for: CTD_Seabird.offset
2018-11-26T23:20:08.933Z,1543274408.933 [CTD_Seabird] Loaded
2018-11-26T23:20:08.933Z,1543274408.933 [ComponentRegistry](DEBUG): Component "CTD_Seabird" handled in its own thread.
2018-11-26T23:20:08.934Z,1543274408.934 [CTD_Seabird ThreadHandler](DEBUG): Created PCaller Thread at 409CE4E0
2018-11-26T23:20:08.934Z,1543274408.934 [CTD_Seabird ThreadHandler](INFO): Protected caller Thread ID is 888
2018-11-26T23:20:08.949Z,1543274408.949 [PAR_Licor] Loaded
2018-11-26T23:20:08.949Z,1543274408.949 [ComponentRegistry](DEBUG): SyncComponent "PAR_Licor" handled in the control thread.
2018-11-26T23:20:08.997Z,1543274408.997 [WetLabsBB2FL] Loaded
2018-11-26T23:20:08.997Z,1543274408.997 [ComponentRegistry](DEBUG): Component "WetLabsBB2FL" handled in its own thread.
2018-11-26T23:20:08.998Z,1543274408.998 [WetLabsBB2FL ThreadHandler](DEBUG): Created PCaller Thread at 409FE4E0
2018-11-26T23:20:08.998Z,1543274408.998 [WetLabsBB2FL ThreadHandler](INFO): Protected caller Thread ID is 889
2018-11-26T23:20:08.999Z,1543274408.999 [Module Loader](DEBUG): Loaded Module: Science (Contains the science components)
2018-11-26T23:20:08.000Z,1543274409.000 [Module Loader](DEBUG): Loading Module at Modules/Control.so
2018-11-26T23:20:09.087Z,1543274409.087 [VerticalControl](DEBUG): Construct VerticalControl.
2018-11-26T23:20:09.171Z,1543274409.171 [VerticalControl] Loaded
2018-11-26T23:20:09.171Z,1543274409.171 [ComponentRegistry](DEBUG): SyncComponent "VerticalControl" handled in the control thread.
2018-11-26T23:20:09.171Z,1543274409.171 [HorizontalControl](DEBUG): Construct HorizontalControl.
2018-11-26T23:20:09.227Z,1543274409.227 [HorizontalControl] Loaded
2018-11-26T23:20:09.228Z,1543274409.228 [ComponentRegistry](DEBUG): SyncComponent "HorizontalControl" handled in the control thread.
2018-11-26T23:20:09.228Z,1543274409.228 [SpeedControl](DEBUG): Construct SpeedControl.
2018-11-26T23:20:09.230Z,1543274409.230 [SpeedControl] Loaded
2018-11-26T23:20:09.230Z,1543274409.230 [ComponentRegistry](DEBUG): SyncComponent "SpeedControl" handled in the control thread.
2018-11-26T23:20:09.231Z,1543274409.231 [LoopControl](DEBUG): Construct LoopControl.
2018-11-26T23:20:09.231Z,1543274409.231 [LoopControl] Loaded
2018-11-26T23:20:09.232Z,1543274409.232 [ComponentRegistry](DEBUG): SyncComponent "LoopControl" handled in the control thread.
2018-11-26T23:20:09.232Z,1543274409.232 [Module Loader](DEBUG): Loaded Module: Control (Contains the Control components, such as Depth, Heading, and Speed Control)
2018-11-26T23:20:09.233Z,1543274409.233 [Module Loader](DEBUG): Loading Module at Modules/Trigger.so
2018-11-26T23:20:09.319Z,1543274409.319 [Module Loader](DEBUG): Loaded Module: Trigger (Contains triggers for use in missions)
2018-11-26T23:20:09.320Z,1543274409.320 [Module Loader](DEBUG): Loading Module at Modules/Navigation.so
2018-11-26T23:20:09.756Z,1543274409.756 [DeadReckonUsingSpeedCalculator] Loaded
2018-11-26T23:20:09.756Z,1543274409.756 [ComponentRegistry](DEBUG): SyncComponent "DeadReckonUsingSpeedCalculator" handled in the control thread.
2018-11-26T23:20:09.772Z,1543274409.772 [NavChart] Loaded
2018-11-26T23:20:09.772Z,1543274409.772 [ComponentRegistry](DEBUG): SyncComponent "NavChart" handled in the control thread.
2018-11-26T23:20:09.776Z,1543274409.776 [UniversalFixResidualReporter] Loaded
2018-11-26T23:20:09.776Z,1543274409.776 [ComponentRegistry](DEBUG): SyncComponent "UniversalFixResidualReporter" handled in the control thread.
2018-11-26T23:20:09.777Z,1543274409.777 [Module Loader](DEBUG): Loaded Module: Navigation (Contains the base navigation components)
2018-11-26T23:20:09.780Z,1543274409.780 [ComponentRegistry](DEBUG): SyncComponent "MissionManager" handled in the control thread.
2018-11-26T23:20:09.781Z,1543274409.781 [ComponentRegistry](DEBUG): SyncComponent "Reporter" handled in the control thread.
2018-11-26T23:20:09.788Z,1543274409.788 [ComponentRegistry](DEBUG): Component "NavChartDb" handled in its own thread.
2018-11-26T23:20:09.789Z,1543274409.789 [NavChartDb ThreadHandler](DEBUG): Created PCaller Thread at 40A8A4E0
2018-11-26T23:20:09.789Z,1543274409.789 [NavChartDb ThreadHandler](INFO): Protected caller Thread ID is 890
2018-11-26T23:20:09.794Z,1543274409.794 [Supervisor](INFO): Main Thread ID is 799
2018-11-26T23:20:09.794Z,1543274409.794 [Supervisor](DEBUG): Running supervisor.
2018-11-26T23:20:09.794Z,1543274409.794 [CommandLine ThreadHandler](INFO): Handler Thread ID is 891
2018-11-26T23:20:09.797Z,1543274409.797 [controlThread ThreadHandler](INFO): Handler Thread ID is 892
2018-11-26T23:20:09.797Z,1543274409.797 [controlThread](DEBUG): Initializing ControlThread
2018-11-26T23:20:09.798Z,1543274409.798 [DepthRateCalculator](DEBUG): Initializing DepthRateCalculator.
2018-11-26T23:20:09.798Z,1543274409.798 [PitchRateCalculator](DEBUG): Initializing PitchRateCalculator.
2018-11-26T23:20:09.799Z,1543274409.799 [SpeedCalculator](DEBUG): Initializing SpeedCalculator.
2018-11-26T23:20:09.799Z,1543274409.799 [TempGradientCalculator](DEBUG): Initializing TempGradientCalculator.
2018-11-26T23:20:09.800Z,1543274409.800 [YawRateCalculator](DEBUG): Initializing YawRateCalculator.
2018-11-26T23:20:09.800Z,1543274409.800 [ElevatorOffsetCalculator](DEBUG): Initializing ElevatorOffsetCalculator.
2018-11-26T23:20:09.807Z,1543274409.807 [SBIT](INFO): Initialize SBIT Component.
2018-11-26T23:20:09.807Z,1543274409.807 [SBIT](IMPORTANT): git: 2018-11-05-23-gc670f65
2018-11-26T23:20:09.808Z,1543274409.808 [SBIT](INFO): git hash: c670f65e90afb3cd45868fc8f56def32ffac7cef
2018-11-26T23:20:09.808Z,1543274409.808 [SBIT](IMPORTANT): Kernel Release: 2.6.27.8
2018-11-26T23:20:09.808Z,1543274409.808 [SBIT](IMPORTANT): Kernel Version:#2 PREEMPT Thu Jan 11 20:13:48 PST 2018
2018-11-26T23:20:09.809Z,1543274409.809 [SBIT](INFO): Beginning SBIT in 23.000000 seconds.
2018-11-26T23:20:09.810Z,1543274409.810 [IBIT](INFO): Initialize IBIT Component.
2018-11-26T23:20:09.811Z,1543274409.811 [CBIT](DEBUG): Initialize CBIT Component.
2018-11-26T23:20:09.812Z,1543274409.812 [logger ThreadHandler](INFO): Handler Thread ID is 893
2018-11-26T23:20:09.825Z,1543274409.825 [CBIT](DEBUG): Initialized mux pins.
2018-11-26T23:20:09.825Z,1543274409.825 [CBIT](FAULT): LAST RESTART WAS UNINTENTIONAL.
2018-11-26T23:20:09.825Z,1543274409.825 [CBIT](DEBUG): Initializing the watchdog timer.
2018-11-26T23:20:09.829Z,1543274409.829 [Radio_Surface ThreadHandler](INFO): Handler Thread ID is 894
2018-11-26T23:20:09.835Z,1543274409.835 [Radio_Surface](INFO): Powering up
2018-11-26T23:20:09.845Z,1543274409.845 [Rowe_600LCM ThreadHandler](INFO): Handler Thread ID is 895
2018-11-26T23:20:09.846Z,1543274409.846 [Rowe_600LCM](INFO): Initializing
2018-11-26T23:20:09.846Z,1543274409.846 [Rowe_600LCM](INFO): Checking LCM
2018-11-26T23:20:09.849Z,1543274409.849 [CBIT](INFO): Last reboot was NOT due to watchdog timer.
2018-11-26T23:20:09.849Z,1543274409.849 [CBIT](DEBUG): Initializing heartbeat.
2018-11-26T23:20:09.921Z,1543274409.921 [CBIT](DEBUG): Deactivating GF circuits.
2018-11-26T23:20:09.921Z,1543274409.921 [CBIT](DEBUG): Deactivating emergency mode.
2018-11-26T23:20:09.961Z,1543274409.961 [VerticalControl](DEBUG): Initialize VerticalControlComponent.
2018-11-26T23:20:09.963Z,1543274409.963 [HorizontalControl](DEBUG): Initialize HorizontalControlComponent.
2018-11-26T23:20:09.964Z,1543274409.964 [SpeedControl](DEBUG): Initialize SpeedControlComponent.
2018-11-26T23:20:09.964Z,1543274409.964 [LoopControl](DEBUG): Initialize LoopControlComponent.
2018-11-26T23:20:09.964Z,1543274409.964 [DeadReckonUsingSpeedCalculator](DEBUG): Initializing DeadReckonUsingSpeedCalculator component.
2018-11-26T23:20:09.965Z,1543274409.965 [DeadReckonUsingSpeedCalculator](INFO): Will consider orientation measurement stale after 120s.
2018-11-26T23:20:09.966Z,1543274409.966 [DeadReckonUsingSpeedCalculator](INFO): Will consider velocity measurement stale after 20s.
2018-11-26T23:20:09.966Z,1543274409.966 [NavChart](DEBUG): Initialize NavChart Navigation.
2018-11-26T23:20:09.967Z,1543274409.967 [UniversalFixResidualReporter](DEBUG): Initializing UniversalFixResidualReporter component.
2018-11-26T23:20:09.971Z,1543274409.971 [MissionManager](INFO): Loading Mission: Missions/Startup.xml
2018-11-26T23:20:09.977Z,1543274409.977 [CTD_NeilBrown ThreadHandler](INFO): Handler Thread ID is 896
2018-11-26T23:20:09.978Z,1543274409.978 [CTD_NeilBrown](INFO): Powering down
2018-11-26T23:20:10.015Z,1543274410.015 [CTD_Seabird ThreadHandler](INFO): Handler Thread ID is 897
2018-11-26T23:20:10.016Z,1543274410.016 [CTD_Seabird](INFO): Start
2018-11-26T23:20:10.017Z,1543274410.017 [CTD_Seabird](DEBUG): Initializing CTD_Seabird.
2018-11-26T23:20:10.019Z,1543274410.019 [CTD_Seabird](INFO): Opening uart, block timeout 10ths=4
2018-11-26T23:20:10.101Z,1543274410.101 [CTD_Seabird](INFO): Starting
2018-11-26T23:20:10.108Z,1543274410.108 [Startup:A.GoToSurface](DEBUG): Construct GoToSurface.
2018-11-26T23:20:10.110Z,1543274410.110 [CTD_Seabird](INFO): Pause
2018-11-26T23:20:10.113Z,1543274410.113 [WetLabsBB2FL ThreadHandler](INFO): Handler Thread ID is 899
2018-11-26T23:20:10.114Z,1543274410.114 [WetLabsBB2FL](INFO): Powering down
2018-11-26T23:20:10.142Z,1543274410.142 [NavChartDb ThreadHandler](INFO): Handler Thread ID is 900
2018-11-26T23:20:10.149Z,1543274410.149 [NavChartDb](INFO): Looking for Electronic Nav Chart file at: Resources/ElectronicNavigationCharts/US1WC07M.000
2018-11-26T23:20:10.150Z,1543274410.150 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US1WC07M.000
2018-11-26T23:20:10.150Z,1543274410.150 [NavChartDb](INFO): Looking for Electronic Nav Chart file at: Resources/ElectronicNavigationCharts/US2WC11M.000
2018-11-26T23:20:10.150Z,1543274410.150 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US2WC11M.000
2018-11-26T23:20:10.150Z,1543274410.150 [NavChartDb](INFO): Looking for Electronic Nav Chart file at: Resources/ElectronicNavigationCharts/US3CA52M.000
2018-11-26T23:20:10.150Z,1543274410.150 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US3CA52M.000
2018-11-26T23:20:10.151Z,1543274410.151 [NavChartDb](INFO): Looking for Electronic Nav Chart file at: Resources/ElectronicNavigationCharts/US4CA60M.000
2018-11-26T23:20:10.151Z,1543274410.151 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US4CA60M.000
2018-11-26T23:20:10.151Z,1543274410.151 [NavChartDb](INFO): Looking for Electronic Nav Chart file at: Resources/ElectronicNavigationCharts/US5CA50M.000
2018-11-26T23:20:10.151Z,1543274410.151 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA50M.000
2018-11-26T23:20:10.152Z,1543274410.152 [NavChartDb](INFO): Looking for Electronic Nav Chart file at: Resources/ElectronicNavigationCharts/US5CA61M.000
2018-11-26T23:20:10.152Z,1543274410.152 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA61M.000
2018-11-26T23:20:10.152Z,1543274410.152 [NavChartDb](INFO): Looking for Electronic Nav Chart file at: Resources/ElectronicNavigationCharts/US5CA62M.000
2018-11-26T23:20:10.152Z,1543274410.152 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA62M.000
2018-11-26T23:20:10.152Z,1543274410.152 [NavChartDb](INFO): Looking for Electronic Nav Chart file at: Resources/ElectronicNavigationCharts/US5CA83M.000
2018-11-26T23:20:10.153Z,1543274410.153 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA83M.000
2018-11-26T23:20:10.258Z,1543274410.258 [MissionManager](DEBUG): 
<?xml version="1.0" encoding="UTF-8"?>
<Mission xmlns="Tethys"
       xmlns:Control="Tethys/Control"
       xmlns:Guidance="Tethys/Guidance" 
       xmlns:Units="Tethys/Units"
       xmlns:Universal="Tethys/Universal"
       xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
       xsi:schemaLocation="Tethys http://okeanids.mbari.org/tethys/Xml/Tethys.xsd
                           Tethys/Control http://okeanids.mbari.org/tethys/Xml/Control.xsd
                           Tethys/Guidance http://okeanids.mbari.org/tethys/Xml/Guidance.xsd
                           Tethys/Units http://okeanids.mbari.org/tethys/Xml/Units.xsd
                           Tethys/Universal http://okeanids.mbari.org/tethys/Xml/Universal.xsd"
       Id="Startup">

    <Guidance:GoToSurface>
        <Progression/>
    </Guidance:GoToSurface>

    <Aggregate Id="StartupSatComms">

        <Sequence/>

        <ReadDatum>
            <Timeout Duration="P1M" />
            <Universal:latitude_fix/>
        </ReadDatum>

        <ReadDatum>
            <Timeout Duration="P1M" />
            <Universal:platform_communications/>
        </ReadDatum>

    </Aggregate>

</Mission>


2018-11-26T23:20:10.259Z,1543274410.259 [MissionManager](INFO): Loading Mission: Missions/Default.xml
2018-11-26T23:20:10.330Z,1543274410.330 [MissionManager](INFO): DefineArg Default.ElapsedSinceDefaultStarted = 0.000000 min
2018-11-26T23:20:10.331Z,1543274410.331 [Default:A.Wait](DEBUG): Construct Wait.
2018-11-26T23:20:10.332Z,1543274410.332 [Default:B.GoToSurface](DEBUG): Construct GoToSurface.
2018-11-26T23:20:10.374Z,1543274410.374 [Rowe_600LCM](INFO): LCM OK
2018-11-26T23:20:10.374Z,1543274410.374 [Rowe_600LCM](INFO): Powering up
2018-11-26T23:20:10.402Z,1543274410.402 [Default:CheckIn:Read_Iridium:A_Timeout:A.Execute](DEBUG): Construct Execute.
2018-11-26T23:20:10.405Z,1543274410.405 [Default:CheckIn:C.Wait](DEBUG): Construct Wait.
2018-11-26T23:20:10.431Z,1543274410.431 [Default:E.Execute](DEBUG): Construct Execute.
2018-11-26T23:20:10.434Z,1543274410.434 [MissionManager](DEBUG): 
<?xml version="1.0" encoding="UTF-8"?>
<Mission xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
         xmlns="Tethys"
         xmlns:Units="Tethys/Units"
         xmlns:Guidance="Tethys/Guidance"
         xmlns:Universal="Tethys/Universal"
         xsi:schemaLocation="Tethys http://okeanids.mbari.org/tethys/Xml/Tethys.xsd
                             Tethys/Units http://okeanids.mbari.org/tethys/Xml/Units.xsd
                             Tethys/Guidance http://okeanids.mbari.org/tethys/Xml/Guidance.xsd
                             Tethys/Universal http://okeanids.mbari.org/tethys/Xml/Universal.xsd"
         Id="Default">

    <DefineArg Name="ElapsedSinceDefaultStarted"><Units:minute/><Value>0</Value></DefineArg>

    <Guidance:Wait>
        <Description>
            Wait a moment to see if the scheduler starts a new mission before
            starting to actually run Default.
        </Description>
        <Sequence/>
        <Setting><Guidance:Wait.duration/><Units:second/><Value>13</Value></Setting>
    </Guidance:Wait>

    <Guidance:GoToSurface>
        <Progression/>
    </Guidance:GoToSurface>

    <Aggregate Id="CheckIn">

        <Sequence Repeat="288"/>

        <ReadDatum Id="Read_GPS">
            <Timeout Duration="P5M"/>
            <Universal:time_fix/>
        </ReadDatum>

        <ReadDatum Id="Read_Iridium">
            <Timeout Duration="P2H">
                <Guidance:Execute>
                    <Sequence/>
                    <Setting><Guidance:Execute.command/><String>Burn on</String></Setting>
                </Guidance:Execute>
                <Syslog Severity="Critical">Dropped weight due to communications timeout.</Syslog>
            </Timeout>
            <Universal:platform_communications/>
        </ReadDatum>

        <Guidance:Wait>
            <Sequence/>
            <Setting><Guidance:Wait.duration/><Units:minute/><Value>5</Value></Setting>
        </Guidance:Wait>

        <Assign><Sequence/><Arg Name="ElapsedSinceDefaultStarted"/><Elapsed><Universal:mission_started/></Elapsed></Assign>

        <Syslog Severity="Important">Default mission has been running for <Arg Name="ElapsedSinceDefaultStarted"/><Units:minute/></Syslog>

    </Aggregate>

    <Syslog Severity="Important">Restarting logs and Default mission.</Syslog>

    <Guidance:Execute>
        <Sequence/>
        <Setting><Guidance:Execute.command/><String>restart logs</String></Setting>
    </Guidance:Execute>

</Mission>


2018-11-26T23:20:10.439Z,1543274410.439 [controlThread](DEBUG): Component order: CycleStarter,DataOverHttps,Depth_Keller,DropWeight,NAL9602,Onboard,PNI_TCM,Aanderaa_O2,PAR_Licor,Depth_Keller,PAR_Licor,DepthRateCalculator,PitchRateCalculator,SpeedCalculator,TempGradientCalculator,YawRateCalculator,ElevatorOffsetCalculator,DeadReckonUsingSpeedCalculator,NavChart,UniversalFixResidualReporter,MissionManager,VerticalControl,HorizontalControl,SpeedControl,LoopControl,BuoyancyServo,ElevatorServo,MassServo,RudderServo,ThrusterServo,SBIT,IBIT,CBIT,Reporter,LogSplitter,
2018-11-26T23:20:10.468Z,1543274410.468 [DataOverHttps](DEBUG): dashIP=134.89.2.23 starts with a digit so assuming it is a numeric IP
2018-11-26T23:20:10.489Z,1543274410.489 [Depth_Keller](ERROR): Pressure reading out of range: 1831.023193 decibar
2018-11-26T23:20:10.664Z,1543274410.664 [DepthRateCalculator](ERROR): Depth measurement is not active
2018-11-26T23:20:10.989Z,1543274410.989 [BuoyancyServo](DEBUG): Initializing EZServoServo.
2018-11-26T23:20:10.997Z,1543274410.997 [BuoyancyServo](DEBUG): Initializing BuoyancyServo.
2018-11-26T23:20:11.003Z,1543274411.003 [ElevatorServo](DEBUG): Initializing EZServoServo.
2018-11-26T23:20:11.009Z,1543274411.009 [ElevatorServo](DEBUG): Initializing ElevatorServo.
2018-11-26T23:20:11.046Z,1543274411.046 [MassServo](DEBUG): Initializing EZServoServo.
2018-11-26T23:20:11.053Z,1543274411.053 [MassServo](DEBUG): Initializing MassServo.
2018-11-26T23:20:11.066Z,1543274411.066 [RudderServo](DEBUG): Initializing EZServoServo.
2018-11-26T23:20:11.073Z,1543274411.073 [RudderServo](DEBUG): Initializing RudderServo.
2018-11-26T23:20:11.090Z,1543274411.090 [ThrusterServo](DEBUG): Initializing EZServoServo.
2018-11-26T23:20:11.097Z,1543274411.097 [ThrusterServo](DEBUG): Initializing ThrusterServo.
2018-11-26T23:20:11.138Z,1543274411.138 [CommandLine](FAULT): Scheduling is paused
2018-11-26T23:20:11.138Z,1543274411.138 [CBIT](INFO): Critical error at 20181126T232008
2018-11-26T23:20:11.138Z,1543274411.138 [Supervisor](INFO): Stop Mission called by CBIT::checkCriticals
2018-11-26T23:20:11.961Z,1543274411.961 [BuoyancyServo](ERROR): Buoyancy initialization uart error serial timeout
2018-11-26T23:20:11.961Z,1543274411.961 [BuoyancyServo](FAULT): Buoyancy failed to initialize
2018-11-26T23:20:11.961Z,1543274411.961 [BuoyancyServo] Communications Fault, FailCount= 1
2018-11-26T23:20:11.961Z,1543274411.961 [BuoyancyServo](ERROR): Communications Fault
2018-11-26T23:20:12.168Z,1543274412.168 [CBIT](ERROR): Communications Fault in component: BuoyancyServo
2018-11-26T23:20:13.933Z,1543274413.933 [Aanderaa_O2](INFO): Powering down
2018-11-26T23:20:14.272Z,1543274414.272 [Rowe_600LCM