2018-11-06T01:00:28.234Z,1541466028.234 [Supervisor](DEBUG): Initializing supervisor.
2018-11-06T01:00:28.238Z,1541466028.238 [SyncHandler](DEBUG): Created PCaller Thread at 404514E0
2018-11-06T01:00:28.238Z,1541466028.238 [SyncHandler](INFO): Protected caller Thread ID is 919
2018-11-06T01:00:28.239Z,1541466028.239 [ComponentRegistry](DEBUG): Component "controlThread" handled in its own thread.
2018-11-06T01:00:28.240Z,1541466028.240 [controlThread ThreadHandler](DEBUG): Created PCaller Thread at 404814E0
2018-11-06T01:00:28.240Z,1541466028.240 [controlThread ThreadHandler](INFO): Protected caller Thread ID is 920
2018-11-06T01:00:28.243Z,1541466028.243 [ComponentRegistry](DEBUG): SyncComponent "CycleStarter" handled in the control thread.
2018-11-06T01:00:28.255Z,1541466028.255 [ComponentRegistry](DEBUG): Component "CommandLine" handled in its own thread.
2018-11-06T01:00:28.256Z,1541466028.256 [CommandLine ThreadHandler](DEBUG): Created PCaller Thread at 404B14E0
2018-11-06T01:00:28.257Z,1541466028.257 [CommandLine ThreadHandler](INFO): Protected caller Thread ID is 921
2018-11-06T01:00:28.257Z,1541466028.257 [ComponentRegistry](DEBUG): Component "logger" handled in its own thread.
2018-11-06T01:00:28.258Z,1541466028.258 [logger ThreadHandler](DEBUG): Created PCaller Thread at 404E14E0
2018-11-06T01:00:28.259Z,1541466028.259 [logger ThreadHandler](INFO): Protected caller Thread ID is 922
2018-11-06T01:00:28.261Z,1541466028.261 [ComponentRegistry](DEBUG): SyncComponent "LogSplitter" handled in the control thread.
2018-11-06T01:00:28.261Z,1541466028.261 [Supervisor](INFO): Looking for Config files in directory: Config/
2018-11-06T01:00:28.263Z,1541466028.263 [Supervisor](INFO): Opening Config file at: Config/Control.cfg
2018-11-06T01:00:28.587Z,1541466028.587 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Control
2018-11-06T01:00:28.587Z,1541466028.587 [Supervisor](INFO): Opening Config file at: Config/logger.cfg
2018-11-06T01:00:28.785Z,1541466028.785 [ComponentRegistry](DEBUG): Loaded Config Component "Config/logger
2018-11-06T01:00:28.785Z,1541466028.785 [Supervisor](INFO): Opening Config file at: Config/Servo.cfg
2018-11-06T01:00:29.080Z,1541466029.080 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Servo
2018-11-06T01:00:29.081Z,1541466029.081 [Supervisor](INFO): Opening Config file at: Config/Derivation.cfg
2018-11-06T01:00:29.225Z,1541466029.225 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Derivation
2018-11-06T01:00:29.226Z,1541466029.226 [Supervisor](INFO): Opening Config file at: Config/Sample.cfg
2018-11-06T01:00:29.324Z,1541466029.324 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Sample
2018-11-06T01:00:29.325Z,1541466029.325 [Supervisor](INFO): Opening Config file at: Config/Simulator.cfg
2018-11-06T01:00:29.781Z,1541466029.781 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Simulator
2018-11-06T01:00:29.782Z,1541466029.782 [Supervisor](INFO): Opening Config file at: Config/Sensor.cfg
2018-11-06T01:00:30.243Z,1541466030.243 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Sensor
2018-11-06T01:00:30.243Z,1541466030.243 [Supervisor](INFO): Opening Config file at: Config/vehicle.cfg
2018-11-06T01:00:30.707Z,1541466030.707 [ComponentRegistry](DEBUG): Loaded Config Component "Config/vehicle
2018-11-06T01:00:30.707Z,1541466030.707 [Supervisor](INFO): Opening Config file at: Config/workSite.cfg
2018-11-06T01:00:30.813Z,1541466030.813 [ComponentRegistry](DEBUG): Loaded Config Component "Config/workSite
2018-11-06T01:00:30.813Z,1541466030.813 [Supervisor](INFO): Opening Config file at: Config/secure.cfg
2018-11-06T01:00:30.909Z,1541466030.909 [ComponentRegistry](DEBUG): Loaded Config Component "Config/secure
2018-11-06T01:00:30.910Z,1541466030.910 [Supervisor](INFO): Opening Config file at: Config/Navigation.cfg
2018-11-06T01:00:31.127Z,1541466031.127 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Navigation
2018-11-06T01:00:31.127Z,1541466031.127 [Supervisor](INFO): Opening Config file at: Config/BIT.cfg
2018-11-06T01:00:31.330Z,1541466031.330 [ComponentRegistry](DEBUG): Loaded Config Component "Config/BIT
2018-11-06T01:00:31.331Z,1541466031.331 [Supervisor](INFO): Opening Config file at: Config/Science.cfg
2018-11-06T01:00:31.680Z,1541466031.680 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Science
2018-11-06T01:00:31.681Z,1541466031.681 [Supervisor](INFO): Opening Config file at: Config/Estimation.cfg
2018-11-06T01:00:31.825Z,1541466031.825 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Estimation
2018-11-06T01:00:31.826Z,1541466031.826 [Supervisor](INFO): Opening Config file at: Config/Guidance.cfg
2018-11-06T01:00:31.908Z,1541466031.908 [Supervisor](INFO): Looking for Config files in directory: Config/lrauv-daphne/
2018-11-06T01:00:31.908Z,1541466031.908 [Supervisor](INFO): Opening Config file at: Config/lrauv-daphne/Control.cfg
2018-11-06T01:00:32.010Z,1541466032.010 [Supervisor](INFO): Opening Config file at: Config/lrauv-daphne/logger.cfg
2018-11-06T01:00:32.128Z,1541466032.128 [Supervisor](INFO): Opening Config file at: Config/lrauv-daphne/Servo.cfg
2018-11-06T01:00:32.223Z,1541466032.223 [Supervisor](INFO): Opening Config file at: Config/lrauv-daphne/Simulator.cfg
2018-11-06T01:00:32.308Z,1541466032.308 [Supervisor](INFO): Opening Config file at: Config/lrauv-daphne/Sensor.cfg
2018-11-06T01:00:32.473Z,1541466032.473 [Supervisor](INFO): Opening Config file at: Config/lrauv-daphne/vehicle.cfg
2018-11-06T01:00:33.002Z,1541466033.002 [Supervisor](INFO): Opening Config file at: Config/lrauv-daphne/workSite.cfg
2018-11-06T01:00:33.205Z,1541466033.205 [Supervisor](INFO): Opening Config file at: Config/lrauv-daphne/Battery.cfg
2018-11-06T01:00:33.661Z,1541466033.661 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Battery
2018-11-06T01:00:33.661Z,1541466033.661 [Supervisor](INFO): Opening Config file at: Config/lrauv-daphne/secure.cfg
2018-11-06T01:00:33.744Z,1541466033.744 [Supervisor](INFO): Opening Config file at: Config/lrauv-daphne/Navigation.cfg
2018-11-06T01:00:33.835Z,1541466033.835 [Supervisor](INFO): Opening Config file at: Config/lrauv-daphne/BIT.cfg
2018-11-06T01:00:33.936Z,1541466033.936 [Supervisor](INFO): Opening Config file at: Config/lrauv-daphne/Science.cfg
2018-11-06T01:00:34.063Z,1541466034.063 [Supervisor](INFO): Looking for Config files in directory: Config/lrauv-daphne/root/
2018-11-06T01:00:34.063Z,1541466034.063 [Supervisor](IMPORTANT): Reading configuration overrides from Data/persisted.cfg
2018-11-06T01:00:34.072Z,1541466034.072 [Module Loader](DEBUG): Loading Module at Modules/Guidance.so
2018-11-06T01:00:34.310Z,1541466034.310 [Module Loader](DEBUG): Loaded Module: Guidance (Contains behaviors and commands)
2018-11-06T01:00:34.311Z,1541466034.311 [Module Loader](DEBUG): Loading Module at Modules/Derivation.so
2018-11-06T01:00:34.352Z,1541466034.352 [DepthRateCalculator] Loaded
2018-11-06T01:00:34.352Z,1541466034.352 [ComponentRegistry](DEBUG): SyncComponent "DepthRateCalculator" handled in the control thread.
2018-11-06T01:00:34.358Z,1541466034.358 [PitchRateCalculator] Loaded
2018-11-06T01:00:34.359Z,1541466034.359 [ComponentRegistry](DEBUG): SyncComponent "PitchRateCalculator" handled in the control thread.
2018-11-06T01:00:34.375Z,1541466034.375 [SpeedCalculator] Loaded
2018-11-06T01:00:34.375Z,1541466034.375 [ComponentRegistry](DEBUG): SyncComponent "SpeedCalculator" handled in the control thread.
2018-11-06T01:00:34.396Z,1541466034.396 [TempGradientCalculator] Loaded
2018-11-06T01:00:34.396Z,1541466034.396 [ComponentRegistry](DEBUG): SyncComponent "TempGradientCalculator" handled in the control thread.
2018-11-06T01:00:34.402Z,1541466034.402 [YawRateCalculator] Loaded
2018-11-06T01:00:34.402Z,1541466034.402 [ComponentRegistry](DEBUG): SyncComponent "YawRateCalculator" handled in the control thread.
2018-11-06T01:00:34.441Z,1541466034.441 [ElevatorOffsetCalculator] Loaded
2018-11-06T01:00:34.442Z,1541466034.442 [ComponentRegistry](DEBUG): SyncComponent "ElevatorOffsetCalculator" handled in the control thread.
2018-11-06T01:00:34.442Z,1541466034.442 [Module Loader](DEBUG): Loaded Module: Derivation (Contains the base derivation components)
2018-11-06T01:00:34.443Z,1541466034.443 [Module Loader](DEBUG): Loading Module at Modules/Estimation.so
2018-11-06T01:00:34.506Z,1541466034.506 [Module Loader](DEBUG): Loaded Module: Estimation (Contains the base estimation components)
2018-11-06T01:00:34.506Z,1541466034.506 [Module Loader](DEBUG): Loading Module at Modules/Servo.so
2018-11-06T01:00:34.618Z,1541466034.618 [BuoyancyServo] Loaded
2018-11-06T01:00:34.618Z,1541466034.618 [ComponentRegistry](DEBUG): SyncComponent "BuoyancyServo" handled in the control thread.
2018-11-06T01:00:34.633Z,1541466034.633 [ElevatorServo] Loaded
2018-11-06T01:00:34.633Z,1541466034.633 [ComponentRegistry](DEBUG): SyncComponent "ElevatorServo" handled in the control thread.
2018-11-06T01:00:34.648Z,1541466034.648 [MassServo] Loaded
2018-11-06T01:00:34.648Z,1541466034.648 [ComponentRegistry](DEBUG): SyncComponent "MassServo" handled in the control thread.
2018-11-06T01:00:34.663Z,1541466034.663 [RudderServo] Loaded
2018-11-06T01:00:34.663Z,1541466034.663 [ComponentRegistry](DEBUG): SyncComponent "RudderServo" handled in the control thread.
2018-11-06T01:00:34.677Z,1541466034.677 [ThrusterServo] Loaded
2018-11-06T01:00:34.678Z,1541466034.678 [ComponentRegistry](DEBUG): SyncComponent "ThrusterServo" handled in the control thread.
2018-11-06T01:00:34.678Z,1541466034.678 [Module Loader](DEBUG): Loaded Module: Servo (This is the module containing motor controllers)
2018-11-06T01:00:34.679Z,1541466034.679 [Module Loader](DEBUG): Loading Module at Modules/Sample.so
2018-11-06T01:00:34.691Z,1541466034.691 [Module Loader](DEBUG): Loaded Module: Sample (This is a Sample Module of Sample Components)
2018-11-06T01:00:34.692Z,1541466034.692 [Module Loader](DEBUG): Loading Module at Modules/Simulator.so
2018-11-06T01:00:34.791Z,1541466034.791 [Module Loader](DEBUG): Loaded Module: Simulator (This is the module containing the Simulator)
2018-11-06T01:00:34.792Z,1541466034.792 [Module Loader](DEBUG): Loading Module at Modules/Sensor.so
2018-11-06T01:00:35.078Z,1541466035.078 [DataOverHttps] Loaded
2018-11-06T01:00:35.078Z,1541466035.078 [ComponentRegistry](DEBUG): SyncComponent "DataOverHttps" handled in the control thread.
2018-11-06T01:00:35.091Z,1541466035.091 [Depth_Keller] Loaded
2018-11-06T01:00:35.092Z,1541466035.092 [ComponentRegistry](DEBUG): SyncComponent "Depth_Keller" handled in the control thread.
2018-11-06T01:00:35.097Z,1541466035.097 [DropWeight] Loaded
2018-11-06T01:00:35.097Z,1541466035.097 [ComponentRegistry](DEBUG): SyncComponent "DropWeight" handled in the control thread.
2018-11-06T01:00:35.194Z,1541466035.194 [NAL9602] Loaded
2018-11-06T01:00:35.194Z,1541466035.194 [ComponentRegistry](DEBUG): SyncComponent "NAL9602" handled in the control thread.
2018-11-06T01:00:35.210Z,1541466035.210 [Onboard] Loaded
2018-11-06T01:00:35.210Z,1541466035.210 [ComponentRegistry](DEBUG): SyncComponent "Onboard" handled in the control thread.
2018-11-06T01:00:35.221Z,1541466035.221 [Radio_Surface] Loaded
2018-11-06T01:00:35.221Z,1541466035.221 [ComponentRegistry](DEBUG): Component "Radio_Surface" handled in its own thread.
2018-11-06T01:00:35.222Z,1541466035.222 [Radio_Surface ThreadHandler](DEBUG): Created PCaller Thread at 4088F4E0
2018-11-06T01:00:35.223Z,1541466035.223 [Radio_Surface ThreadHandler](INFO): Protected caller Thread ID is 1005
2018-11-06T01:00:35.269Z,1541466035.269 [PNI_TCM] Loaded
2018-11-06T01:00:35.269Z,1541466035.269 [ComponentRegistry](DEBUG): SyncComponent "PNI_TCM" handled in the control thread.
2018-11-06T01:00:35.329Z,1541466035.329 [Rowe_600LCM] Loaded
2018-11-06T01:00:35.329Z,1541466035.329 [ComponentRegistry](DEBUG): Component "Rowe_600LCM" handled in its own thread.
2018-11-06T01:00:35.330Z,1541466035.330 [Rowe_600LCM ThreadHandler](DEBUG): Created PCaller Thread at 408BF4E0
2018-11-06T01:00:35.330Z,1541466035.330 [Rowe_600LCM ThreadHandler](INFO): Protected caller Thread ID is 1006
2018-11-06T01:00:35.331Z,1541466035.331 [Module Loader](DEBUG): Loaded Module: Sensor (Contains the sensor components)
2018-11-06T01:00:35.332Z,1541466035.332 [Module Loader](DEBUG): Loading Module at Modules/BIT.so
2018-11-06T01:00:35.458Z,1541466035.458 [SBIT](DEBUG): Construct Startup Built In Test.
2018-11-06T01:00:35.480Z,1541466035.480 [SBIT] Loaded
2018-11-06T01:00:35.480Z,1541466035.480 [ComponentRegistry](DEBUG): SyncComponent "SBIT" handled in the control thread.
2018-11-06T01:00:35.481Z,1541466035.481 [IBIT](DEBUG): Construct Initiated Built In Test.
2018-11-06T01:00:35.494Z,1541466035.494 [IBIT] Loaded
2018-11-06T01:00:35.494Z,1541466035.494 [ComponentRegistry](DEBUG): SyncComponent "IBIT" handled in the control thread.
2018-11-06T01:00:35.497Z,1541466035.497 [CBIT](DEBUG): Construct Continuous Built In Test.
2018-11-06T01:00:35.644Z,1541466035.644 [CBIT] Loaded
2018-11-06T01:00:35.644Z,1541466035.644 [ComponentRegistry](DEBUG): SyncComponent "CBIT" handled in the control thread.
2018-11-06T01:00:35.644Z,1541466035.644 [Module Loader](DEBUG): Loaded Module: BIT (Contains the BuiltInTest components, such as C Built In Test)
2018-11-06T01:00:35.645Z,1541466035.645 [Module Loader](DEBUG): Loading Module at Modules/Science.so
2018-11-06T01:00:35.800Z,1541466035.800 [Aanderaa_O2] Loaded
2018-11-06T01:00:35.801Z,1541466035.801 [ComponentRegistry](DEBUG): SyncComponent "Aanderaa_O2" handled in the control thread.
2018-11-06T01:00:35.882Z,1541466035.882 [CTD_NeilBrown] Loaded
2018-11-06T01:00:35.882Z,1541466035.882 [ComponentRegistry](DEBUG): Component "CTD_NeilBrown" handled in its own thread.
2018-11-06T01:00:35.884Z,1541466035.884 [CTD_NeilBrown ThreadHandler](DEBUG): Created PCaller Thread at 4098B4E0
2018-11-06T01:00:35.884Z,1541466035.884 [CTD_NeilBrown ThreadHandler](INFO): Protected caller Thread ID is 1007
2018-11-06T01:00:35.898Z,1541466035.898 [PAR_Licor] Loaded
2018-11-06T01:00:35.898Z,1541466035.898 [ComponentRegistry](DEBUG): SyncComponent "PAR_Licor" handled in the control thread.
2018-11-06T01:00:35.946Z,1541466035.946 [WetLabsBB2FL] Loaded
2018-11-06T01:00:35.947Z,1541466035.947 [ComponentRegistry](DEBUG): Component "WetLabsBB2FL" handled in its own thread.
2018-11-06T01:00:35.948Z,1541466035.948 [WetLabsBB2FL ThreadHandler](DEBUG): Created PCaller Thread at 409BB4E0
2018-11-06T01:00:35.948Z,1541466035.948 [WetLabsBB2FL ThreadHandler](INFO): Protected caller Thread ID is 1008
2018-11-06T01:00:35.949Z,1541466035.949 [Module Loader](DEBUG): Loaded Module: Science (Contains the science components)
2018-11-06T01:00:35.949Z,1541466035.949 [Module Loader](DEBUG): Loading Module at Modules/Control.so
2018-11-06T01:00:36.015Z,1541466036.015 [VerticalControl](DEBUG): Construct VerticalControl.
2018-11-06T01:00:36.098Z,1541466036.098 [VerticalControl] Loaded
2018-11-06T01:00:36.098Z,1541466036.098 [ComponentRegistry](DEBUG): SyncComponent "VerticalControl" handled in the control thread.
2018-11-06T01:00:36.099Z,1541466036.099 [HorizontalControl](DEBUG): Construct HorizontalControl.
2018-11-06T01:00:36.155Z,1541466036.155 [HorizontalControl] Loaded
2018-11-06T01:00:36.155Z,1541466036.155 [ComponentRegistry](DEBUG): SyncComponent "HorizontalControl" handled in the control thread.
2018-11-06T01:00:36.156Z,1541466036.156 [SpeedControl](DEBUG): Construct SpeedControl.
2018-11-06T01:00:36.157Z,1541466036.157 [SpeedControl] Loaded
2018-11-06T01:00:36.158Z,1541466036.158 [ComponentRegistry](DEBUG): SyncComponent "SpeedControl" handled in the control thread.
2018-11-06T01:00:36.158Z,1541466036.158 [LoopControl](DEBUG): Construct LoopControl.
2018-11-06T01:00:36.159Z,1541466036.159 [LoopControl] Loaded
2018-11-06T01:00:36.159Z,1541466036.159 [ComponentRegistry](DEBUG): SyncComponent "LoopControl" handled in the control thread.
2018-11-06T01:00:36.160Z,1541466036.160 [Module Loader](DEBUG): Loaded Module: Control (Contains the Control components, such as Depth, Heading, and Speed Control)
2018-11-06T01:00:36.160Z,1541466036.160 [Module Loader](DEBUG): Loading Module at Modules/Trigger.so
2018-11-06T01:00:36.185Z,1541466036.185 [Module Loader](DEBUG): Loaded Module: Trigger (Contains triggers for use in missions)
2018-11-06T01:00:36.185Z,1541466036.185 [Module Loader](DEBUG): Loading Module at Modules/Navigation.so
2018-11-06T01:00:36.273Z,1541466036.273 [DeadReckonUsingSpeedCalculator] Loaded
2018-11-06T01:00:36.273Z,1541466036.273 [ComponentRegistry](DEBUG): SyncComponent "DeadReckonUsingSpeedCalculator" handled in the control thread.
2018-11-06T01:00:36.290Z,1541466036.290 [NavChart] Loaded
2018-11-06T01:00:36.290Z,1541466036.290 [ComponentRegistry](DEBUG): SyncComponent "NavChart" handled in the control thread.
2018-11-06T01:00:36.294Z,1541466036.294 [UniversalFixResidualReporter] Loaded
2018-11-06T01:00:36.294Z,1541466036.294 [ComponentRegistry](DEBUG): SyncComponent "UniversalFixResidualReporter" handled in the control thread.
2018-11-06T01:00:36.295Z,1541466036.295 [Module Loader](DEBUG): Loaded Module: Navigation (Contains the base navigation components)
2018-11-06T01:00:36.298Z,1541466036.298 [ComponentRegistry](DEBUG): SyncComponent "MissionManager" handled in the control thread.
2018-11-06T01:00:36.299Z,1541466036.299 [ComponentRegistry](DEBUG): SyncComponent "Reporter" handled in the control thread.
2018-11-06T01:00:36.306Z,1541466036.306 [ComponentRegistry](DEBUG): Component "NavChartDb" handled in its own thread.
2018-11-06T01:00:36.307Z,1541466036.307 [NavChartDb ThreadHandler](DEBUG): Created PCaller Thread at 40A474E0
2018-11-06T01:00:36.307Z,1541466036.307 [NavChartDb ThreadHandler](INFO): Protected caller Thread ID is 1009
2018-11-06T01:00:36.312Z,1541466036.312 [Supervisor](INFO): Main Thread ID is 796
2018-11-06T01:00:36.312Z,1541466036.312 [Supervisor](DEBUG): Running supervisor.
2018-11-06T01:00:36.313Z,1541466036.313 [CommandLine ThreadHandler](INFO): Handler Thread ID is 1010
2018-11-06T01:00:36.315Z,1541466036.315 [controlThread ThreadHandler](INFO): Handler Thread ID is 1011
2018-11-06T01:00:36.316Z,1541466036.316 [controlThread](DEBUG): Initializing ControlThread
2018-11-06T01:00:36.316Z,1541466036.316 [DepthRateCalculator](DEBUG): Initializing DepthRateCalculator.
2018-11-06T01:00:36.317Z,1541466036.317 [PitchRateCalculator](DEBUG): Initializing PitchRateCalculator.
2018-11-06T01:00:36.317Z,1541466036.317 [SpeedCalculator](DEBUG): Initializing SpeedCalculator.
2018-11-06T01:00:36.317Z,1541466036.317 [TempGradientCalculator](DEBUG): Initializing TempGradientCalculator.
2018-11-06T01:00:36.318Z,1541466036.318 [YawRateCalculator](DEBUG): Initializing YawRateCalculator.
2018-11-06T01:00:36.318Z,1541466036.318 [ElevatorOffsetCalculator](DEBUG): Initializing ElevatorOffsetCalculator.
2018-11-06T01:00:36.323Z,1541466036.323 [SBIT](INFO): Initialize SBIT Component.
2018-11-06T01:00:36.324Z,1541466036.324 [SBIT](IMPORTANT): git: 2018-11-05
2018-11-06T01:00:36.324Z,1541466036.324 [SBIT](INFO): git hash: 17f8e4440ddc7f0910aa911cb821ed1a114d9cee
2018-11-06T01:00:36.324Z,1541466036.324 [SBIT](IMPORTANT): Kernel Release: 2.6.27.8
2018-11-06T01:00:36.324Z,1541466036.324 [SBIT](IMPORTANT): Kernel Version:#2 PREEMPT Thu Jan 11 20:13:48 PST 2018
2018-11-06T01:00:36.326Z,1541466036.326 [SBIT](INFO): Beginning SBIT in 36.000000 seconds.
2018-11-06T01:00:36.326Z,1541466036.326 [IBIT](INFO): Initialize IBIT Component.
2018-11-06T01:00:36.327Z,1541466036.327 [CBIT](DEBUG): Initialize CBIT Component.
2018-11-06T01:00:36.327Z,1541466036.327 [CBIT](INFO): Last reboot was NOT due to watchdog timer.
2018-11-06T01:00:36.328Z,1541466036.328 [logger ThreadHandler](INFO): Handler Thread ID is 1012
2018-11-06T01:00:36.349Z,1541466036.349 [Radio_Surface ThreadHandler](INFO): Handler Thread ID is 1013
2018-11-06T01:00:36.355Z,1541466036.355 [Radio_Surface](INFO): Powering up
2018-11-06T01:00:36.361Z,1541466036.361 [Rowe_600LCM ThreadHandler](INFO): Handler Thread ID is 1014
2018-11-06T01:00:36.362Z,1541466036.362 [Rowe_600LCM](INFO): Initializing
2018-11-06T01:00:36.363Z,1541466036.363 [Rowe_600LCM](INFO): Checking LCM
2018-11-06T01:00:36.371Z,1541466036.371 [Rowe_600LCM](INFO): LCM OK
2018-11-06T01:00:36.371Z,1541466036.371 [Rowe_600LCM](INFO): Powering up
2018-11-06T01:00:36.377Z,1541466036.377 [CTD_NeilBrown ThreadHandler](INFO): Handler Thread ID is 1015
2018-11-06T01:00:36.378Z,1541466036.378 [CTD_NeilBrown](INFO): Powering down
2018-11-06T01:00:36.402Z,1541466036.402 [WetLabsBB2FL ThreadHandler](INFO): Handler Thread ID is 1016
2018-11-06T01:00:36.406Z,1541466036.406 [WetLabsBB2FL](INFO): Powering down
2018-11-06T01:00:36.437Z,1541466036.437 [VerticalControl](DEBUG): Initialize VerticalControlComponent.
2018-11-06T01:00:36.439Z,1541466036.439 [HorizontalControl](DEBUG): Initialize HorizontalControlComponent.
2018-11-06T01:00:36.440Z,1541466036.440 [SpeedControl](DEBUG): Initialize SpeedControlComponent.
2018-11-06T01:00:36.440Z,1541466036.440 [LoopControl](DEBUG): Initialize LoopControlComponent.
2018-11-06T01:00:36.441Z,1541466036.441 [DeadReckonUsingSpeedCalculator](DEBUG): Initializing DeadReckonUsingSpeedCalculator component.
2018-11-06T01:00:36.441Z,1541466036.441 [DeadReckonUsingSpeedCalculator](INFO): Will consider orientation measurement stale after 120s.
2018-11-06T01:00:36.442Z,1541466036.442 [DeadReckonUsingSpeedCalculator](INFO): Will consider velocity measurement stale after 20s.
2018-11-06T01:00:36.442Z,1541466036.442 [NavChart](DEBUG): Initialize NavChart Navigation.
2018-11-06T01:00:36.443Z,1541466036.443 [UniversalFixResidualReporter](DEBUG): Initializing UniversalFixResidualReporter component.
2018-11-06T01:00:36.444Z,1541466036.444 [MissionManager](INFO): Loading Mission: Missions/Startup.xml
2018-11-06T01:00:36.449Z,1541466036.449 [NavChartDb ThreadHandler](INFO): Handler Thread ID is 1017
2018-11-06T01:00:36.452Z,1541466036.452 [NavChartDb](INFO): Looking for Electronic Nav Chart file at: Resources/ElectronicNavigationCharts/US1WC07M.000
2018-11-06T01:00:36.453Z,1541466036.453 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US1WC07M.000
2018-11-06T01:00:36.453Z,1541466036.453 [NavChartDb](INFO): Looking for Electronic Nav Chart file at: Resources/ElectronicNavigationCharts/US2WC11M.000
2018-11-06T01:00:36.453Z,1541466036.453 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US2WC11M.000
2018-11-06T01:00:36.453Z,1541466036.453 [NavChartDb](INFO): Looking for Electronic Nav Chart file at: Resources/ElectronicNavigationCharts/US3CA52M.000
2018-11-06T01:00:36.454Z,1541466036.454 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US3CA52M.000
2018-11-06T01:00:36.454Z,1541466036.454 [NavChartDb](INFO): Looking for Electronic Nav Chart file at: Resources/ElectronicNavigationCharts/US4CA60M.000
2018-11-06T01:00:36.454Z,1541466036.454 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US4CA60M.000
2018-11-06T01:00:36.454Z,1541466036.454 [NavChartDb](INFO): Looking for Electronic Nav Chart file at: Resources/ElectronicNavigationCharts/US5CA50M.000
2018-11-06T01:00:36.454Z,1541466036.454 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA50M.000
2018-11-06T01:00:36.455Z,1541466036.455 [NavChartDb](INFO): Looking for Electronic Nav Chart file at: Resources/ElectronicNavigationCharts/US5CA61M.000
2018-11-06T01:00:36.455Z,1541466036.455 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA61M.000
2018-11-06T01:00:36.455Z,1541466036.455 [NavChartDb](INFO): Looking for Electronic Nav Chart file at: Resources/ElectronicNavigationCharts/US5CA62M.000
2018-11-06T01:00:36.455Z,1541466036.455 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA62M.000
2018-11-06T01:00:36.455Z,1541466036.455 [NavChartDb](INFO): Looking for Electronic Nav Chart file at: Resources/ElectronicNavigationCharts/US5CA83M.000
2018-11-06T01:00:36.455Z,1541466036.455 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA83M.000
2018-11-06T01:00:36.495Z,1541466036.495 [Startup:A.GoToSurface](DEBUG): Construct GoToSurface.
2018-11-06T01:00:36.518Z,1541466036.518 [MissionManager](DEBUG): 
<?xml version="1.0" encoding="UTF-8"?>
<Mission xmlns="Tethys"
       xmlns:Control="Tethys/Control"
       xmlns:Guidance="Tethys/Guidance" 
       xmlns:Units="Tethys/Units"
       xmlns:Universal="Tethys/Universal"
       xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
       xsi:schemaLocation="Tethys http://okeanids.mbari.org/tethys/Xml/Tethys.xsd
                           Tethys/Control http://okeanids.mbari.org/tethys/Xml/Control.xsd
                           Tethys/Guidance http://okeanids.mbari.org/tethys/Xml/Guidance.xsd
                           Tethys/Units http://okeanids.mbari.org/tethys/Xml/Units.xsd
                           Tethys/Universal http://okeanids.mbari.org/tethys/Xml/Universal.xsd"
       Id="Startup">

    <Guidance:GoToSurface>
        <Progression/>
    </Guidance:GoToSurface>

    <Aggregate Id="StartupSatComms">

        <Sequence/>

        <ReadDatum>
            <Timeout Duration="P1M" />
            <Universal:latitude_fix/>
        </ReadDatum>

        <ReadDatum>
            <Timeout Duration="P1M" />
            <Universal:platform_communications/>
        </ReadDatum>

    </Aggregate>

</Mission>


2018-11-06T01:00:36.519Z,1541466036.519 [MissionManager](INFO): Loading Mission: Missions/Default.xml
2018-11-06T01:00:36.613Z,1541466036.613 [MissionManager](INFO): DefineArg Default.ElapsedSinceDefaultStarted = 0.000000 min
2018-11-06T01:00:36.615Z,1541466036.615 [Default:A.Wait](DEBUG): Construct Wait.
2018-11-06T01:00:36.616Z,1541466036.616 [Default:B.GoToSurface](DEBUG): Construct GoToSurface.
2018-11-06T01:00:36.640Z,1541466036.640 [Default:CheckIn:Read_Iridium:A_Timeout:A.Execute](DEBUG): Construct Execute.
2018-11-06T01:00:36.663Z,1541466036.663 [Default:CheckIn:C.Wait](DEBUG): Construct Wait.
2018-11-06T01:00:36.685Z,1541466036.685 [Default:E.Execute](DEBUG): Construct Execute.
2018-11-06T01:00:36.689Z,1541466036.689 [MissionManager](DEBUG): 
<?xml version="1.0" encoding="UTF-8"?>
<Mission xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
         xmlns="Tethys"
         xmlns:Units="Tethys/Units"
         xmlns:Guidance="Tethys/Guidance"
         xmlns:Universal="Tethys/Universal"
         xsi:schemaLocation="Tethys http://okeanids.mbari.org/tethys/Xml/Tethys.xsd
                             Tethys/Units http://okeanids.mbari.org/tethys/Xml/Units.xsd
                             Tethys/Guidance http://okeanids.mbari.org/tethys/Xml/Guidance.xsd
                             Tethys/Universal http://okeanids.mbari.org/tethys/Xml/Universal.xsd"
         Id="Default">

    <DefineArg Name="ElapsedSinceDefaultStarted"><Units:minute/><Value>0</Value></DefineArg>

    <Guidance:Wait>
        <Description>
            Wait a moment to see if the scheduler starts a new mission before
            starting to actually run Default.
        </Description>
        <Sequence/>
        <Setting><Guidance:Wait.duration/><Units:second/><Value>13</Value></Setting>
    </Guidance:Wait>

    <Guidance:GoToSurface>
        <Progression/>
    </Guidance:GoToSurface>

    <Aggregate Id="CheckIn">

        <Sequence Repeat="288"/>

        <ReadDatum Id="Read_GPS">
            <Timeout Duration="P5M"/>
            <Universal:time_fix/>
        </ReadDatum>

        <ReadDatum Id="Read_Iridium">
            <Timeout Duration="P2H">
                <Guidance:Execute>
                    <Sequence/>
                    <Setting><Guidance:Execute.command/><String>Burn on</String></Setting>
                </Guidance:Execute>
                <Syslog Severity="Critical">Dropped weight due to communications timeout.</Syslog>
            </Timeout>
            <Universal:platform_communications/>
        </ReadDatum>

        <Guidance:Wait>
            <Sequence/>
            <Setting><Guidance:Wait.duration/><Units:minute/><Value>5</Value></Setting>
        </Guidance:Wait>

        <Assign><Sequence/><Arg Name="ElapsedSinceDefaultStarted"/><Elapsed><Universal:mission_started/></Elapsed></Assign>

        <Syslog Severity="Important">Default mission has been running for <Arg Name="ElapsedSinceDefaultStarted"/><Units:minute/></Syslog>

    </Aggregate>

    <Syslog Severity="Important">Restarting logs and Default mission.</Syslog>

    <Guidance:Execute>
        <Sequence/>
        <Setting><Guidance:Execute.command/><String>restart logs</String></Setting>
    </Guidance:Execute>

</Mission>


2018-11-06T01:00:36.708Z,1541466036.708 [controlThread](DEBUG): Component order: CycleStarter,DataOverHttps,Depth_Keller,DropWeight,NAL9602,Onboard,PNI_TCM,Aanderaa_O2,PAR_Licor,Depth_Keller,PAR_Licor,DepthRateCalculator,PitchRateCalculator,SpeedCalculator,TempGradientCalculator,YawRateCalculator,ElevatorOffsetCalculator,DeadReckonUsingSpeedCalculator,NavChart,UniversalFixResidualReporter,MissionManager,VerticalControl,HorizontalControl,SpeedControl,LoopControl,BuoyancyServo,ElevatorServo,MassServo,RudderServo,ThrusterServo,SBIT,IBIT,CBIT,Reporter,LogSplitter,
2018-11-06T01:00:36.733Z,1541466036.733 [DataOverHttps](DEBUG): dashIP=134.89.2.23 starts with a digit so assuming it is a numeric IP
2018-11-06T01:00:36.779Z,1541466036.779 [Depth_Keller](ERROR): Pressure reading out of range: 1831.023193 decibar
2018-11-06T01:00:36.934Z,1541466036.934 [DepthRateCalculator](ERROR): Depth measurement is not active
2018-11-06T01:00:37.133Z,1541466037.133 [BuoyancyServo](DEBUG): Initializing EZServoServo.
2018-11-06T01:00:37.141Z,1541466037.141 [BuoyancyServo](DEBUG): Initializing BuoyancyServo.
2018-11-06T01:00:37.155Z,1541466037.155 [ElevatorServo](DEBUG): Initializing EZServoServo.
2018-11-06T01:00:37.162Z,1541466037.162 [ElevatorServo](DEBUG): Initializing ElevatorServo.
2018-11-06T01:00:37.189Z,1541466037.189 [MassServo](DEBUG): Initializing EZServoServo.
2018-11-06T01:00:37.197Z,1541466037.197 [MassServo](DEBUG): Initializing MassServo.
2018-11-06T01:00:37.215Z,1541466037.215 [RudderServo](DEBUG): Initializing EZServoServo.
2018-11-06T01:00:37.221Z,1541466037.221 [RudderServo](DEBUG): Initializing RudderServo.
2018-11-06T01:00:37.235Z,1541466037.235 [ThrusterServo](DEBUG): Initializing EZServoServo.
2018-11-06T01:00:37.241Z,1541466037.241 [ThrusterServo](DEBUG): Initializing ThrusterServo.
2018-11-06T01:00:40.393Z,1541466040.393 [Aanderaa_O2](INFO): Powering down
2018-11-06T01:00:40.752Z,1541466040.752 [Rowe_600LCM](INFO): Stopping potential previous instance(s) of Rowe LCM interface
2018-11-06T01:00:40.930Z,1541466040.930 [Rowe_600LCM](INFO): Started Rowe LCM interface with command:nohup ./lrauv-framework/onboard/bin/roweadcp -ldir /mnt/mmc/LRAUV/Logs/latest/ -dev /dev/ttyB4 -b 9600 >& /dev/null &
2018-11-06T01:00:40.978Z,1541466040.978 [Rowe_600LCM](INFO): LCM subscribed to channel:Rowe_600LCM.adcp_dvl.bottom_track
2018-11-06T01:00:40.979Z,1541466040.979 [Rowe_600LCM](INFO): LCM subscribed to channel:Rowe_600LCM.adcp_dvl.vehicle_water_velocity
2018-11-06T01:00:40.980Z,1541466040.980 [Rowe_600LCM](INFO): LCM subscribed to channel:rowe_dvl.rowe
2018-11-06T01:01:05.587Z,1541466065.587 [NAL9602](INFO): Powering up NAL9602
2018-11-06T01:01:11.158Z,1541466071.158 [CommandLine](IMPORTANT): got command failComponent
2018-11-06T01:01:11.158Z,1541466071.158 [CommandLine](IMPORTANT): Failed components:
2018-11-06T01:01:11.158Z,1541466071.158 [CommandLine](IMPORTANT): No failed Components.
2018-11-06T01:01:12.888Z,1541466072.888 [SBIT](IMPORTANT): Beginning Startup BIT
2018-11-06T01:01:12.910Z,1541466072.910 [CBIT](IMPORTANT): Beginning ground fault scan
2018-11-06T01:01:23.881Z,1541466083.881 [CBIT](IMPORTANT): No ground fault detected
mA:
CHAN A0 (Batt): -0.006814
CHAN A1 (24V): -0.010407
CHAN A2 (12V): -0.002017
CHAN A3 (5V): -0.001430
CHAN B0 (3.3V): 0.000041
CHAN B1 (3.15aV): -0.000179
CHAN B2 (3.15bV): -0.000169
CHAN B3 (GND): -0.000127
OPEN: -0.000382
Full Scale Calc: 4.765 mA, -1.589 mA
2018-11-06T01:01:26.539Z,1541466086.539 [NAL9602](ERROR): NAL9602 initialization error.
2018-11-06T01:01:26.539Z,1541466086.539 [NAL9602] Communications Fault, FailCount= 1
2018-11-06T01:01:26.539Z,1541466086.539 [NAL9602](ERROR): Communications Fault
2018-11-06T01:01:26.658Z,1541466086.658 [CBIT](ERROR): Communications Fault in component: NAL9602
2018-11-06T01:01:26.951Z,1541466086.951 [NAL9602](INFO): Powering down
2018-11-06T01:01:27.877Z,1541466087.877 [CBIT](INFO): Clearing failed state for component NAL9602
2018-11-06T01:01:27.877Z,1541466087.877 [NAL9602] No Fault, FailCount= 1
2018-11-06T01:01:57.295Z,1541466117.295 [NAL9602](INFO): Powering up NAL9602
2018-11-06T01:02:04.795Z,1541466124.795 [CommandLine](IMPORTANT): got command failComponent
2018-11-06T01:02:04.795Z,1541466124.795 [CommandLine](IMPORTANT): Failed components:
2018-11-06T01:02:04.795Z,1541466124.795 [CommandLine](IMPORTANT): No failed Components.
2018-11-06T01:02:06.932Z,1541466126.932 [SBIT](IMPORTANT): SBIT PASSED
2018-11-06T01:02:06.998Z,1541466126.998 [CommandLine](IMPORTANT): got command configSet list
2018-11-06T01:02:06.999Z,1541466126.999 [CommandLine](IMPORTANT): Listing configuration overrides from Data/persisted.cfg
2018-11-06T01:02:06.000Z,1541466127.000 [CommandLine](IMPORTANT): BPC1.batteryMissingStickThreshold=28 count;

2018-11-06T01:02:06.000Z,1541466127.000 [CommandLine](IMPORTANT): BPC1.batteryMuxCycleTime=10 minute;

2018-11-06T01:02:06.000Z,1541466127.000 [CommandLine](IMPORTANT): CTD_Seabird.loadAtStartup=0 bool;

2018-11-06T01:02:06.000Z,1541466127.000 [CommandLine](IMPORTANT): Express none VerticalTemperatureHomogeneityIndexCalculator.vertical_temperature_homogeneity_index;

2018-11-06T01:02:07.000Z,1541466127.000 [CommandLine](IMPORTANT): Express linearApproximation height_above_sea_floor 5.000000 meter;

2018-11-06T01:02:07.000Z,1541466127.000 [CommandLine](IMPORTANT): Rowe_600LCM.loadAtStartup=1 bool;

2018-11-06T01:02:07.000Z,1541466127.000 [CommandLine](IMPORTANT): VerticalControl.buoyancyNeutral=213 cubic_centimeter;

2018-11-06T01:02:07.000Z,1541466127.000 [CommandLine](IMPORTANT): VerticalControl.massDefault=4 millimeter;

2018-11-06T01:02:07.338Z,1541466127.338 [MissionManager](IMPORTANT): Started mission Startup
2018-11-06T01:02:07.338Z,1541466127.338 [Startup] Running Loop=1
2018-11-06T01:02:07.338Z,1541466127.338 [Startup](DEBUG): Aggregate::initialize Startup
2018-11-06T01:02:07.338Z,1541466127.338 [Startup:A.GoToSurface] Running Loop=1
2018-11-06T01:02:07.338Z,1541466127.338 [Startup:A.GoToSurface](DEBUG): Initialize GoToSurfaceComponent.
2018-11-06T01:02:07.339Z,1541466127.339 [Startup:A.GoToSurface](DEBUG): No depth rate setting specified. Using default value of nan m/s.
2018-11-06T01:02:07.339Z,1541466127.339 [Startup:A.GoToSurface](DEBUG): No pitch setting specified. Using default value of nan degrees.
2018-11-06T01:02:07.340Z,1541466127.340 [Startup:A.GoToSurface](DEBUG): No speed setting specified. Using default value of 1.000000 m/s.
2018-11-06T01:02:07.340Z,1541466127.340 [Startup:A.GoToSurface](DEBUG): No surface timeout specified. Using default value of 1000.000000 seconds.
2018-11-06T01:02:07.341Z,1541466127.341 [Startup:A.GoToSurface](INFO): Received pitch timeout configuration 60.000000 seconds.
2018-11-06T01:02:07.375Z,1541466127.375 [Startup:StartupSatComms] Running Loop=1
2018-11-06T01:02:07.375Z,1541466127.375 [Startup:StartupSatComms](DEBUG): Aggregate::initialize Startup:StartupSatComms
2018-11-06T01:02:07.375Z,1541466127.375 [Startup:StartupSatComms:A] Running Loop=1
2018-11-06T01:02:07.777Z,1541466127.777 [Startup:StartupSatComms:A](DEBUG): Initialize ReadDataComponent to sense latitude_fix
2018-11-06T01:02:18.095Z,1541466138.095 [NAL9602](ERROR): NAL9602 initialization error.
2018-11-06T01:02:18.095Z,1541466138.095 [NAL9602] Communications Fault, FailCount= 2
2018-11-06T01:02:18.095Z,1541466138.095 [NAL9602](ERROR): Communications Fault
2018-11-06T01:02:18.202Z,1541466138.202 [CBIT](ERROR): Communications Fault in component: NAL9602
2018-11-06T01:02:18.494Z,1541466138.494 [NAL9602](INFO): Powering down
2018-11-06T01:02:19.359Z,1541466139.359 [CBIT](INFO): Clearing failed state for component NAL9602
2018-11-06T01:02:19.359Z,1541466139.359 [NAL9602] No Fault, FailCount= 2
2018-11-06T01:02:48.894Z,1541466168.894 [NAL9602](INFO): Powering up NAL9602
2018-11-06T01:03:02.024Z,1541466182.024 [DataOverHttps](INFO): setting available, lastComms_.elapsed()=0.004381
2018-11-06T01:03:07.670Z,1541466187.670 [Startup:StartupSatComms:A](INFO): Timed out from 2018-11-06T01:02:07.4Z
2018-11-06T01:03:07.670Z,1541466187.670 [Startup:StartupSatComms:A] Stopped
2018-11-06T01:03:07.670Z,1541466187.670 [Startup:StartupSatComms:B] Running Loop=1
2018-11-06T01:03:08.073Z,1541466188.073 [Startup:StartupSatComms:B](DEBUG): Initialize ReadDataComponent to sense platform_communications
2018-11-06T01:03:12.623Z,1541466192.623 [NAL9602](ERROR): NAL9602 initialization error.
2018-11-06T01:03:12.623Z,1541466192.623 [NAL9602] Communications Fault, FailCount= 3
2018-11-06T01:03:12.623Z,1541466192.623 [NAL9602](ERROR): Communications Fault
2018-11-06T01:03:12.726Z,1541466192.726 [CBIT](ERROR): Communications Fault in component: NAL9602
2018-11-06T01:03:12.757Z,1541466192.757 [DataOverHttps](INFO): Sending 132 bytes from file Logs/20181105T234244/Courier0000.lzma
2018-11-06T01:03:12.787Z,1541466192.787 [NAL9602](INFO): Powering down
2018-11-06T01:03:13.594Z,1541466193.594 [DataOverHttps](INFO): Moved sent file to Logs/20181105T234244/Courier0000.lzma.bak
2018-11-06T01:03:13.594Z,1541466193.594 [DataOverHttps](INFO): SBD MOMSN=8793617
2018-11-06T01:03:13.680Z,1541466193.680 [CBIT](INFO): Clearing failed state for component NAL9602
2018-11-06T01:03:13.680Z,1541466193.680 [NAL9602] No Fault, FailCount= 3
2018-11-06T01:03:23.351Z,1541466203.351 [DataOverHttps](INFO): Sending 18 bytes from file Logs/20181105T234324/Courier0000.lzma
2018-11-06T01:03:24.154Z,1541466204.154 [DataOverHttps](INFO): Moved sent file to Logs/20181105T234324/Courier0000.lzma.bak
2018-11-06T01:03:24.154Z,1541466204.154 [DataOverHttps](INFO): SBD MOMSN=8793622
2018-11-06T01:03:34.053Z,1541466214.053 [DataOverHttps](INFO): Sending 174 bytes from file Logs/20181105T234610/Courier0000.lzma
2018-11-06T01:03:34.853Z,1541466214.853 [DataOverHttps](INFO): Moved sent file to Logs/20181105T234610/Courier0000.lzma.bak
2018-11-06T01:03:34.853Z,1541466214.853 [DataOverHttps](INFO): SBD MOMSN=8793625
2018-11-06T01:03:39.278Z,1541466219.278 [DeadReckonUsingSpeedCalculator](ERROR): Will not write estimated position: latitudeAccuracy_ = nan, longitudeAccuracy_ = nan, depthAccuracy_ = nan
2018-11-06T01:03:39.279Z,1541466219.279 [DeadReckonUsingSpeedCalculator] Software Fault, FailCount= 1
2018-11-06T01:03:39.279Z,1541466219.279 [DeadReckonUsingSpeedCalculator](ERROR): Software Fault
2018-11-06T01:03:39.323Z,1541466219.323 [CBIT](ERROR): Software Fault in component: DeadReckonUsingSpeedCalculator
2018-11-06T01:03:39.436Z,1541466219.436 [CBIT](INFO): Clearing failed state for component DeadReckonUsingSpeedCalculator
2018-11-06T01:03:39.436Z,1541466219.436 [DeadReckonUsingSpeedCalculator] No Fault, FailCount= 1
2018-11-06T01:03:39.838Z,1541466219.838 [DeadReckonUsingSpeedCalculator](DEBUG): Initializing DeadReckonUsingSpeedCalculator component.
2018-11-06T01:03:39.839Z,1541466219.839 [DeadReckonUsingSpeedCalculator](INFO): Will consider orientation measurement stale after 120s.
2018-11-06T01:03:39.839Z,1541466219.839 [DeadReckonUsingSpeedCalculator](INFO): Will consider velocity measurement stale after 20s.
2018-11-06T01:03:44.811Z,1541466224.811 [NAL9602](INFO): Powering up NAL9602
2018-11-06T01:03:44.911Z,1541466224.911 [DataOverHttps](INFO): Sending 132 bytes from file Logs/20181105T234757/Courier0000.lzma
2018-11-06T01:03:45.699Z,1541466225.699 [DataOverHttps](INFO): Moved sent file to Logs/20181105T234757/Courier0000.lzma.bak
2018-11-06T01:03:45.699Z,1541466225.699 [DataOverHttps](INFO): SBD MOMSN=8793631
2018-11-06T01:03:55.354Z,1541466235.354 [DataOverHttps](INFO): Sending 18 bytes from file Logs/20181105T234906/Courier0000.lzma
2018-11-06T01:03:56.155Z,1541466236.155 [DataOverHttps](INFO): Moved sent file to Logs/20181105T234906/Courier0000.lzma.bak
2018-11-06T01:03:56.156Z,1541466236.156 [DataOverHttps](INFO): SBD MOMSN=8793636
2018-11-06T01:04:06.557Z,1541466246.557 [NAL9602](ERROR): NAL9602 initialization error.
2018-11-06T01:04:06.557Z,1541466246.557 [NAL9602] Communications Fault, FailCount= 4
2018-11-06T01:04:06.557Z,1541466246.557 [NAL9602](ERROR): Communications Fault
2018-11-06T01:04:06.630Z,1541466246.630 [CBIT](ERROR): Communications Fault in component: NAL9602
2018-11-06T01:04:06.654Z,1541466246.654 [DataOverHttps](INFO): Sending 132 bytes from file Logs/20181105T235030/Courier0000.lzma
2018-11-06T01:04:06.663Z,1541466246.663 [NAL9602](INFO): Powering down
2018-11-06T01:04:07.439Z,1541466247.439 [DataOverHttps](INFO): Moved sent file to Logs/20181105T235030/Courier0000.lzma.bak
2018-11-06T01:04:07.439Z,1541466247.439 [DataOverHttps](INFO): SBD MOMSN=8793639
2018-11-06T01:04:07.548Z,1541466247.548 [CBIT](INFO): Clearing failed state for component NAL9602
2018-11-06T01:04:07.548Z,1541466247.548 [NAL9602] No Fault, FailCount= 4
2018-11-06T01:04:08.055Z,1541466248.055 [Startup:StartupSatComms:B](INFO): Timed out from 2018-11-06T01:03:07.7Z
2018-11-06T01:04:08.056Z,1541466248.056 [Startup:StartupSatComms:B] Stopped
2018-11-06T01:04:08.056Z,1541466248.056 [Startup:StartupSatComms](INFO): Completed Startup:StartupSatComms
2018-11-06T01:04:08.056Z,1541466248.056 [Startup:StartupSatComms] Stopped
2018-11-06T01:04:08.056Z,1541466248.056 [Startup:StartupSatComms](DEBUG): Aggregate::uninitialize Startup:StartupSatComms
2018-11-06T01:04:08.061Z,1541466248.061 [Startup](INFO): Completed Startup
2018-11-06T01:04:08.061Z,1541466248.061 [MissionManager](INFO): Startup is completed.
2018-11-06T01:04:08.062Z,1541466248.062 [MissionManager](INFO): Uninitializing Mission Startup
2018-11-06T01:04:08.062Z,1541466248.062 [Startup] Stopped
2018-11-06T01:04:08.062Z,1541466248.062 [Startup](DEBUG): Aggregate::uninitialize Startup
2018-11-06T01:04:08.062Z,1541466248.062 [Startup:A.GoToSurface] Stopped
2018-11-06T01:04:08.062Z,1541466248.062 [Startup:A.GoToSurface](DEBUG): Uninitialize GoToSurfaceComponent.
2018-11-06T01:04:08.348Z,1541466248.348 [MissionManager](IMPORTANT): Started mission Default
2018-11-06T01:04:08.348Z,1541466248.348 [Default] Running Loop=1
2018-11-06T01:04:08.348Z,1541466248.348 [Default](DEBUG): Aggregate::initialize Default
2018-11-06T01:04:08.348Z,1541466248.348 [Default:B.GoToSurface] Running Loop=1
2018-11-06T01:04:08.353Z,1541466248.353 [Default:B.GoToSurface](DEBUG): Initialize GoToSurfaceComponent.
2018-11-06T01:04:08.354Z,1541466248.354 [Default:B.GoToSurface](DEBUG): No depth rate setting specified. Using default value of nan m/s.
2018-11-06T01:04:08.354Z,1541466248.354 [Default:B.GoToSurface](DEBUG): No pitch setting specified. Using default value of nan degrees.
2018-11-06T01:04:08.355Z,1541466248.355 [Default:B.GoToSurface](DEBUG): No speed setting specified. Using default value of 1.000000 m/s.
2018-11-06T01:04:08.355Z,1541466248.355 [Default:B.GoToSurface](DEBUG): No surface timeout specified. Using default value of 1000.000000 seconds.
2018-11-06T01:04:08.356Z,1541466248.356 [Default:B.GoToSurface](INFO): Received pitch timeout configuration 60.000000 seconds.
2018-11-06T01:04:08.356Z,1541466248.356 [Default:A.Wait] Running Loop=1
2018-11-06T01:04:08.356Z,1541466248.356 [Default:A.Wait](DEBUG): Initialize Wait Component.
2018-11-06T01:04:21.498Z,1541466261.498 [Default:A.Wait](INFO): Done Waiting.
2018-11-06T01:04:21.498Z,1541466261.498 [Default:A.Wait] Stopped
2018-11-06T01:04:21.498Z,1541466261.498 [Default:A.Wait](DEBUG): Uninitialize Wait Component.
2018-11-06T01:04:21.935Z,1541466261.935 [Default:CheckIn] Running Loop=1
2018-11-06T01:04:21.935Z,1541466261.935 [Default:CheckIn](DEBUG): Aggregate::initialize Default:CheckIn
2018-11-06T01:04:21.935Z,1541466261.935 [Default:CheckIn:Read_GPS] Running Loop=1
2018-11-06T01:04:22.305Z,1541466262.305 [Default:CheckIn:Read_GPS](DEBUG): Initialize ReadDataComponent to sense time_fix
2018-11-06T01:04:23.235Z,1541466263.235 [CommandLine](IMPORTANT): got command restart application
2018-11-06T01:04:24.241Z,1541466264.241 [Supervisor](INFO): Stop Mission called by Supervisor::terminate
2018-11-06T01:04:24.245Z,1541466264.245 [CommandLine ThreadHandler](INFO): Uninitializing protected caller thread.
2018-11-06T01:04:24.246Z,1541466264.246 [CommandLine ThreadHandler](INFO): Thread cancelled.
2018-11-06T01:04:24.425Z,1541466264.425 [Supervisor](DEBUG): Uninitializing supervisor and starting cleanup.  Bye!
2018-11-06T01:04:24.425Z,1541466264.425 [CommandLine ThreadHandler](INFO): Thread cancelled.
2018-11-06T01:04:24.426Z,1541466264.426 [CommandLine](INFO): Join timeout helper Thread ID is 1038
2018-11-06T01:04:24.441Z,1541466264.441 [ComponentRegistry](INFO): Shutting down NavChartDb ThreadHandler
2018-11-06T01:04:24.441Z,1541466264.441 [NavChartDb ThreadHandler](INFO): Thread cancelled.
2018-11-06T01:04:24.442Z,1541466264.442 [NavChartDb](INFO): Join timeout helper Thread ID is 1039
2018-11-06T01:04:24.621Z,1541466264.621 [NavChartDb ThreadHandler](INFO): Uninitializing protected caller thread.
2018-11-06T01:04:24.621Z,1541466264.621 [NavChartDb ThreadHandler](INFO): Thread cancelled.
2018-11-06T01:04:24.637Z,1541466264.637 [ComponentRegistry](INFO): Shutting down WetLabsBB2FL ThreadHandler
2018-11-06T01:04:24.637Z,1541466264.637 [WetLabsBB2FL ThreadHandler](INFO): Thread cancelled.
2018-11-06T01:04:24.637Z,1541466264.637 [WetLabsBB2FL](INFO): Join timeout helper Thread ID is 1040
2018-11-06T01:04:24.841Z,1541466264.841 [WetLabsBB2FL ThreadHandler](INFO): Uninitializing protected caller thread.
2018-11-06T01:04:24.841Z,1541466264.841 [WetLabsBB2FL](INFO): Powering down
2018-11-06T01:04:24.842Z,1541466264.842 [WetLabsBB2FL ThreadHandler](INFO): Thread cancelled.
2018-11-06T01:04:24.857Z,1541466264.857 [ComponentRegistry](INFO): Shutting down CTD_NeilBrown ThreadHandler
2018-11-06T01:04:24.857Z,1541466264.857 [CTD_NeilBrown ThreadHandler](INFO): Thread cancelled.
2018-11-06T01:04:24.857Z,1541466264.857 [CTD_NeilBrown](INFO): Join timeout helper Thread ID is 1041
2018-11-06T01:04:24.949Z,1541466264.949 [CTD_NeilBrown ThreadHandler](INFO): Uninitializing protected caller thread.
2018-11-06T01:04:24.949Z,1541466264.949 [CTD_NeilBrown](INFO): Powering down
2018-11-06T01:04:24.961Z,1541466264.961 [CTD_NeilBrown ThreadHandler](INFO): Thread cancelled.
2018-11-06T01:04:24.969Z,1541466264.969 [ComponentRegistry](INFO): Shutting down Rowe_600LCM ThreadHandler
2018-11-06T01:04:24.969Z,1541466264.969 [Rowe_600LCM ThreadHandler](INFO): Thread cancelled.
2018-11-06T01:04:24.969Z,1541466264.969 [Rowe_600LCM](INFO): Join timeout helper Thread ID is 1042
2018-11-06T01:04:25.273Z,1541466265.273 [Rowe_600LCM ThreadHandler](INFO): Uninitializing protected caller thread.
2018-11-06T01:04:25.273Z,1541466265.273 [Rowe_600LCM](INFO): Stopping potential previous instance(s) of roweadcp LCM interface
2018-11-06T01:04:25.368Z,1541466265.368 [Rowe_600LCM](INFO): Powering down
2018-11-06T01:04:25.370Z,1541466265.370 [Rowe_600LCM ThreadHandler](INFO): Thread cancelled.
2018-11-06T01:04:25.374Z,1541466265.374 [ComponentRegistry](INFO): Shutting down Radio_Surface ThreadHandler
2018-11-06T01:04:25.374Z,1541466265.374 [Radio_Surface ThreadHandler](INFO): Thread cancelled.
2018-11-06T01:04:25.375Z,1541466265.375 [Radio_Surface](INFO): Join timeout helper Thread ID is 1044
2018-11-06T01:04:25.573Z,1541466265.573 [Radio_Surface ThreadHandler](INFO): Uninitializing protected caller thread.
2018-11-06T01:04:25.574Z,1541466265.574 [Radio_Surface ThreadHandler](INFO): Thread cancelled.
2018-11-06T01:04:25.594Z,1541466265.594 [ComponentRegistry](INFO): Shutting down logger ThreadHandler
2018-11-06T01:04:25.594Z,1541466265.594 [logger ThreadHandler](INFO): Thread cancelled.
2018-11-06T01:04:25.594Z,1541466265.594 [logger](INFO): Join timeout helper Thread ID is 1045
2018-11-06T01:04:25.633Z,1541466265.633 [logger ThreadHandler](INFO): Uninitializing protected caller thread.
2018-11-06T01:04:25.633Z,1541466265.633 [logger ThreadHandler](INFO): Thread cancelled.
2018-11-06T01:04:25.654Z,1541466265.654 [ComponentRegistry](INFO): Shutting down CommandLine ThreadHandler
2018-11-06T01:04:25.654Z,1541466265.654 [CommandLine ThreadHandler](INFO): Thread cancelled.
2018-11-06T01:04:25.654Z,1541466265.654 [ComponentRegistry](INFO): Shutting down controlThread ThreadHandler
2018-11-06T01:04:25.654Z,1541466265.654 [controlThread ThreadHandler](INFO): Thread cancelled.
2018-11-06T01:04:25.654Z,1541466265.654 [controlThread](INFO): Join timeout helper Thread ID is 1046
2018-11-06T01:04:25.841Z,1541466265.841 [controlThread ThreadHandler](INFO): Uninitializing protected caller thread.
2018-11-06T01:04:25.841Z,1541466265.841 [controlThread](DEBUG): Uninitializing ControlThread
2018-11-06T01:04:25.842Z,1541466265.842 [NAL9602](INFO): Powering down
2018-11-06T01:04:25.843Z,1541466265.843 [PNI_TCM](INFO): Powering down
2018-11-06T01:04:25.929Z,1541466265.929 [Aanderaa_O2](INFO): Powering down
2018-11-06T01:04:25.931Z,1541466265.931 [DepthRateCalculator](DEBUG): Initializing DepthRateCalculator.
2018-11-06T01:04:25.931Z,1541466265.931 [ElevatorOffsetCalculator](DEBUG): Uninitializing ElevatorOffsetCalculator.
2018-11-06T01:04:25.932Z,1541466265.932 [NavChart](DEBUG): Uninitialize NavChart Navigation.
2018-11-06T01:04:25.932Z,1541466265.932 [MissionManager](INFO): Uninitializing Mission Default
2018-11-06T01:04:25.933Z,1541466265.933 [Default] Stopped
2018-11-06T01:04:25.933Z,1541466265.933 [Default](DEBUG): Aggregate::uninitialize Default
2018-11-06T01:04:25.933Z,1541466265.933 [Default:B.GoToSurface] Stopped
2018-11-06T01:04:25.933Z,1541466265.933 [Default:B.GoToSurface](DEBUG): Uninitialize GoToSurfaceComponent.
2018-11-06T01:04:25.933Z,1541466265.933 [Default:CheckIn] Stopped
2018-11-06T01:04:25.933Z,1541466265.933 [Default:CheckIn](DEBUG): Aggregate::uninitialize Default:CheckIn
2018-11-06T01:04:25.933Z,1541466265.933 [Default:CheckIn:Read_GPS] Stopped
2018-11-06T01:04:25.937Z,1541466265.937 [VerticalControl](DEBUG): Uninitialize VerticalControlComponent.
2018-11-06T01:04:25.937Z,1541466265.937 [HorizontalControl](DEBUG): Uninitialize HorizontalControlComponent.
2018-11-06T01:04:25.938Z,1541466265.938 [SpeedControl](DEBUG): Uninitialize SpeedControlComponent.
2018-11-06T01:04:25.938Z,1541466265.938 [LoopControl](DEBUG): Uninitialize LoopControlComponent.
2018-11-06T01:04:25.938Z,1541466265.938 [BuoyancyServo](DEBUG): Uninitialize Buoyancy Servo.
2018-11-06T01:04:25.938Z,1541466265.938 [BuoyancyServo](INFO): Powering down
2018-11-06T01:04:25.953Z,1541466265.953 [ElevatorServo](DEBUG): Uninitialize Elevator Servo.
2018-11-06T01:04:25.953Z,1541466265.953 [ElevatorServo](INFO): Powering down
2018-11-06T01:04:25.954Z,1541466265.954 [MassServo](DEBUG): Uninitialize Mass Servo.
2018-11-06T01:04:25.954Z,1541466265.954 [MassServo](INFO): Powering down
2018-11-06T01:04:25.955Z,1541466265.955 [RudderServo](DEBUG): Uninitialize Rudder Servo.
2018-11-06T01:04:25.955Z,1541466265.955 [RudderServo](INFO): Powering down
2018-11-06T01:04:25.956Z,1541466265.956 [ThrusterServo](DEBUG): Uninitialize Thruster Servo.
2018-11-06T01:04:25.956Z,1541466265.956 [ThrusterServo](INFO): Powering down
2018-11-06T01:04:25.958Z,1541466265.958 [SBIT](DEBUG): Uninitialize SBIT Component.
2018-11-06T01:04:25.958Z,1541466265.958 [IBIT](DEBUG): Uninitialize IBIT Component.
2018-11-06T01:04:25.958Z,1541466265.958 [CBIT](DEBUG): Uninitialize CBIT Component.
2018-11-06T01:04:25.959Z,1541466265.959 [controlThread ThreadHandler](INFO): Thread cancelled.
2018-11-06T01:04:26.097Z,1541466266.097 [Rowe_600LCM ThreadHandler](INFO): Thread cancelled.
2018-11-06T01:04:26.103Z,1541466266.103 [Radio_Surface ThreadHandler](INFO): Thread cancelled.
2018-11-06T01:04:26.182Z,1541466266.182 [WetLabsBB2FL ThreadHandler](INFO): Thread cancelled.
2018-11-06T01:04:26.186Z,1541466266.186 [CTD_NeilBrown ThreadHandler](INFO): Thread cancelled.
2018-11-06T01:04:26.213Z,1541466266.213 [NavChartDb ThreadHandler](INFO): Thread cancelled.
2018-11-06T01:04:26.269Z,1541466266.269 [logger ThreadHandler](INFO): Thread cancelled.