2018-11-05T16:00:11.074Z,1541433611.074 [Supervisor](DEBUG): Initializing supervisor.
2018-11-05T16:00:11.077Z,1541433611.077 [SyncHandler](DEBUG): Created PCaller Thread at 404514E0
2018-11-05T16:00:11.078Z,1541433611.078 [SyncHandler](INFO): Protected caller Thread ID is 9111
2018-11-05T16:00:11.078Z,1541433611.078 [ComponentRegistry](DEBUG): Component "controlThread" handled in its own thread.
2018-11-05T16:00:11.079Z,1541433611.079 [controlThread ThreadHandler](DEBUG): Created PCaller Thread at 404814E0
2018-11-05T16:00:11.080Z,1541433611.080 [controlThread ThreadHandler](INFO): Protected caller Thread ID is 9112
2018-11-05T16:00:11.083Z,1541433611.083 [ComponentRegistry](DEBUG): SyncComponent "CycleStarter" handled in the control thread.
2018-11-05T16:00:11.094Z,1541433611.094 [ComponentRegistry](DEBUG): Component "CommandLine" handled in its own thread.
2018-11-05T16:00:11.095Z,1541433611.095 [CommandLine ThreadHandler](DEBUG): Created PCaller Thread at 404B14E0
2018-11-05T16:00:11.096Z,1541433611.096 [CommandLine ThreadHandler](INFO): Protected caller Thread ID is 9113
2018-11-05T16:00:11.097Z,1541433611.097 [ComponentRegistry](DEBUG): Component "logger" handled in its own thread.
2018-11-05T16:00:11.098Z,1541433611.098 [logger ThreadHandler](DEBUG): Created PCaller Thread at 404E14E0
2018-11-05T16:00:11.098Z,1541433611.098 [logger ThreadHandler](INFO): Protected caller Thread ID is 9114
2018-11-05T16:00:11.100Z,1541433611.100 [ComponentRegistry](DEBUG): SyncComponent "LogSplitter" handled in the control thread.
2018-11-05T16:00:11.100Z,1541433611.100 [Supervisor](INFO): Looking for Config files in directory: Config/
2018-11-05T16:00:11.102Z,1541433611.102 [Supervisor](INFO): Opening Config file at: Config/Control.cfg
2018-11-05T16:00:11.426Z,1541433611.426 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Control
2018-11-05T16:00:11.427Z,1541433611.427 [Supervisor](INFO): Opening Config file at: Config/logger.cfg
2018-11-05T16:00:11.624Z,1541433611.624 [ComponentRegistry](DEBUG): Loaded Config Component "Config/logger
2018-11-05T16:00:11.625Z,1541433611.625 [Supervisor](INFO): Opening Config file at: Config/Servo.cfg
2018-11-05T16:00:11.918Z,1541433611.918 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Servo
2018-11-05T16:00:11.919Z,1541433611.919 [Supervisor](INFO): Opening Config file at: Config/Derivation.cfg
2018-11-05T16:00:12.065Z,1541433612.065 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Derivation
2018-11-05T16:00:12.065Z,1541433612.065 [Supervisor](INFO): Opening Config file at: Config/Sample.cfg
2018-11-05T16:00:12.165Z,1541433612.165 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Sample
2018-11-05T16:00:12.166Z,1541433612.166 [Supervisor](INFO): Opening Config file at: Config/Simulator.cfg
2018-11-05T16:00:12.621Z,1541433612.621 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Simulator
2018-11-05T16:00:12.621Z,1541433612.621 [Supervisor](INFO): Opening Config file at: Config/Sensor.cfg
2018-11-05T16:00:13.082Z,1541433613.082 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Sensor
2018-11-05T16:00:13.082Z,1541433613.082 [Supervisor](INFO): Opening Config file at: Config/vehicle.cfg
2018-11-05T16:00:13.618Z,1541433613.618 [ComponentRegistry](DEBUG): Loaded Config Component "Config/vehicle
2018-11-05T16:00:13.619Z,1541433613.619 [Supervisor](INFO): Opening Config file at: Config/workSite.cfg
2018-11-05T16:00:13.723Z,1541433613.723 [ComponentRegistry](DEBUG): Loaded Config Component "Config/workSite
2018-11-05T16:00:13.724Z,1541433613.724 [Supervisor](INFO): Opening Config file at: Config/secure.cfg
2018-11-05T16:00:13.821Z,1541433613.821 [ComponentRegistry](DEBUG): Loaded Config Component "Config/secure
2018-11-05T16:00:13.822Z,1541433613.822 [Supervisor](INFO): Opening Config file at: Config/Navigation.cfg
2018-11-05T16:00:14.038Z,1541433614.038 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Navigation
2018-11-05T16:00:14.039Z,1541433614.039 [Supervisor](INFO): Opening Config file at: Config/BIT.cfg
2018-11-05T16:00:14.242Z,1541433614.242 [ComponentRegistry](DEBUG): Loaded Config Component "Config/BIT
2018-11-05T16:00:14.242Z,1541433614.242 [Supervisor](INFO): Opening Config file at: Config/Science.cfg
2018-11-05T16:00:14.589Z,1541433614.589 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Science
2018-11-05T16:00:14.589Z,1541433614.589 [Supervisor](INFO): Opening Config file at: Config/Estimation.cfg
2018-11-05T16:00:14.735Z,1541433614.735 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Estimation
2018-11-05T16:00:14.736Z,1541433614.736 [Supervisor](INFO): Opening Config file at: Config/Guidance.cfg
2018-11-05T16:00:14.819Z,1541433614.819 [Supervisor](INFO): Looking for Config files in directory: Config/lrauv-daphne/
2018-11-05T16:00:14.820Z,1541433614.820 [Supervisor](INFO): Opening Config file at: Config/lrauv-daphne/Control.cfg
2018-11-05T16:00:14.923Z,1541433614.923 [Supervisor](INFO): Opening Config file at: Config/lrauv-daphne/logger.cfg
2018-11-05T16:00:15.042Z,1541433615.042 [Supervisor](INFO): Opening Config file at: Config/lrauv-daphne/Servo.cfg
2018-11-05T16:00:15.138Z,1541433615.138 [Supervisor](INFO): Opening Config file at: Config/lrauv-daphne/Simulator.cfg
2018-11-05T16:00:15.224Z,1541433615.224 [Supervisor](INFO): Opening Config file at: Config/lrauv-daphne/Sensor.cfg
2018-11-05T16:00:15.388Z,1541433615.388 [Supervisor](INFO): Opening Config file at: Config/lrauv-daphne/vehicle.cfg
2018-11-05T16:00:15.566Z,1541433615.566 [Supervisor](INFO): Opening Config file at: Config/lrauv-daphne/workSite.cfg
2018-11-05T16:00:15.657Z,1541433615.657 [Supervisor](INFO): Opening Config file at: Config/lrauv-daphne/Battery.cfg
2018-11-05T16:00:16.121Z,1541433616.121 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Battery
2018-11-05T16:00:16.122Z,1541433616.122 [Supervisor](INFO): Opening Config file at: Config/lrauv-daphne/secure.cfg
2018-11-05T16:00:16.206Z,1541433616.206 [Supervisor](INFO): Opening Config file at: Config/lrauv-daphne/Navigation.cfg
2018-11-05T16:00:16.298Z,1541433616.298 [Supervisor](INFO): Opening Config file at: Config/lrauv-daphne/BIT.cfg
2018-11-05T16:00:16.400Z,1541433616.400 [Supervisor](INFO): Opening Config file at: Config/lrauv-daphne/Science.cfg
2018-11-05T16:00:16.528Z,1541433616.528 [Supervisor](INFO): Looking for Config files in directory: Config/lrauv-daphne/root/
2018-11-05T16:00:16.529Z,1541433616.529 [Supervisor](IMPORTANT): Reading configuration overrides from Data/persisted.cfg
2018-11-05T16:00:16.537Z,1541433616.537 [Module Loader](DEBUG): Loading Module at Modules/Guidance.so
2018-11-05T16:00:16.773Z,1541433616.773 [Module Loader](DEBUG): Loaded Module: Guidance (Contains behaviors and commands)
2018-11-05T16:00:16.774Z,1541433616.774 [Module Loader](DEBUG): Loading Module at Modules/Derivation.so
2018-11-05T16:00:16.816Z,1541433616.816 [DepthRateCalculator] Loaded
2018-11-05T16:00:16.816Z,1541433616.816 [ComponentRegistry](DEBUG): SyncComponent "DepthRateCalculator" handled in the control thread.
2018-11-05T16:00:16.822Z,1541433616.822 [PitchRateCalculator] Loaded
2018-11-05T16:00:16.823Z,1541433616.823 [ComponentRegistry](DEBUG): SyncComponent "PitchRateCalculator" handled in the control thread.
2018-11-05T16:00:16.838Z,1541433616.838 [SpeedCalculator] Loaded
2018-11-05T16:00:16.839Z,1541433616.839 [ComponentRegistry](DEBUG): SyncComponent "SpeedCalculator" handled in the control thread.
2018-11-05T16:00:16.859Z,1541433616.859 [TempGradientCalculator] Loaded
2018-11-05T16:00:16.859Z,1541433616.859 [ComponentRegistry](DEBUG): SyncComponent "TempGradientCalculator" handled in the control thread.
2018-11-05T16:00:16.865Z,1541433616.865 [YawRateCalculator] Loaded
2018-11-05T16:00:16.865Z,1541433616.865 [ComponentRegistry](DEBUG): SyncComponent "YawRateCalculator" handled in the control thread.
2018-11-05T16:00:16.904Z,1541433616.904 [ElevatorOffsetCalculator] Loaded
2018-11-05T16:00:16.904Z,1541433616.904 [ComponentRegistry](DEBUG): SyncComponent "ElevatorOffsetCalculator" handled in the control thread.
2018-11-05T16:00:16.905Z,1541433616.905 [Module Loader](DEBUG): Loaded Module: Derivation (Contains the base derivation components)
2018-11-05T16:00:16.905Z,1541433616.905 [Module Loader](DEBUG): Loading Module at Modules/Estimation.so
2018-11-05T16:00:16.972Z,1541433616.972 [Module Loader](DEBUG): Loaded Module: Estimation (Contains the base estimation components)
2018-11-05T16:00:16.972Z,1541433616.972 [Module Loader](DEBUG): Loading Module at Modules/Servo.so
2018-11-05T16:00:17.082Z,1541433617.082 [BuoyancyServo] Loaded
2018-11-05T16:00:17.082Z,1541433617.082 [ComponentRegistry](DEBUG): SyncComponent "BuoyancyServo" handled in the control thread.
2018-11-05T16:00:17.096Z,1541433617.096 [ElevatorServo] Loaded
2018-11-05T16:00:17.097Z,1541433617.097 [ComponentRegistry](DEBUG): SyncComponent "ElevatorServo" handled in the control thread.
2018-11-05T16:00:17.111Z,1541433617.111 [MassServo] Loaded
2018-11-05T16:00:17.112Z,1541433617.112 [ComponentRegistry](DEBUG): SyncComponent "MassServo" handled in the control thread.
2018-11-05T16:00:17.127Z,1541433617.127 [RudderServo] Loaded
2018-11-05T16:00:17.127Z,1541433617.127 [ComponentRegistry](DEBUG): SyncComponent "RudderServo" handled in the control thread.
2018-11-05T16:00:17.141Z,1541433617.141 [ThrusterServo] Loaded
2018-11-05T16:00:17.141Z,1541433617.141 [ComponentRegistry](DEBUG): SyncComponent "ThrusterServo" handled in the control thread.
2018-11-05T16:00:17.141Z,1541433617.141 [Module Loader](DEBUG): Loaded Module: Servo (This is the module containing motor controllers)
2018-11-05T16:00:17.142Z,1541433617.142 [Module Loader](DEBUG): Loading Module at Modules/Sample.so
2018-11-05T16:00:17.156Z,1541433617.156 [Module Loader](DEBUG): Loaded Module: Sample (This is a Sample Module of Sample Components)
2018-11-05T16:00:17.156Z,1541433617.156 [Module Loader](DEBUG): Loading Module at Modules/Simulator.so
2018-11-05T16:00:17.256Z,1541433617.256 [Module Loader](DEBUG): Loaded Module: Simulator (This is the module containing the Simulator)
2018-11-05T16:00:17.257Z,1541433617.257 [Module Loader](DEBUG): Loading Module at Modules/Sensor.so
2018-11-05T16:00:17.556Z,1541433617.556 [DataOverHttps] Loaded
2018-11-05T16:00:17.556Z,1541433617.556 [ComponentRegistry](DEBUG): SyncComponent "DataOverHttps" handled in the control thread.
2018-11-05T16:00:17.569Z,1541433617.569 [Depth_Keller] Loaded
2018-11-05T16:00:17.570Z,1541433617.570 [ComponentRegistry](DEBUG): SyncComponent "Depth_Keller" handled in the control thread.
2018-11-05T16:00:17.574Z,1541433617.574 [DropWeight] Loaded
2018-11-05T16:00:17.575Z,1541433617.575 [ComponentRegistry](DEBUG): SyncComponent "DropWeight" handled in the control thread.
2018-11-05T16:00:17.670Z,1541433617.670 [NAL9602] Loaded
2018-11-05T16:00:17.671Z,1541433617.671 [ComponentRegistry](DEBUG): SyncComponent "NAL9602" handled in the control thread.
2018-11-05T16:00:17.686Z,1541433617.686 [Onboard] Loaded
2018-11-05T16:00:17.687Z,1541433617.687 [ComponentRegistry](DEBUG): SyncComponent "Onboard" handled in the control thread.
2018-11-05T16:00:17.697Z,1541433617.697 [Radio_Surface] Loaded
2018-11-05T16:00:17.697Z,1541433617.697 [ComponentRegistry](DEBUG): Component "Radio_Surface" handled in its own thread.
2018-11-05T16:00:17.698Z,1541433617.698 [Radio_Surface ThreadHandler](DEBUG): Created PCaller Thread at 4088F4E0
2018-11-05T16:00:17.699Z,1541433617.699 [Radio_Surface ThreadHandler](INFO): Protected caller Thread ID is 9197
2018-11-05T16:00:17.744Z,1541433617.744 [PNI_TCM] Loaded
2018-11-05T16:00:17.744Z,1541433617.744 [ComponentRegistry](DEBUG): SyncComponent "PNI_TCM" handled in the control thread.
2018-11-05T16:00:17.803Z,1541433617.803 [Rowe_600LCM] Loaded
2018-11-05T16:00:17.803Z,1541433617.803 [ComponentRegistry](DEBUG): Component "Rowe_600LCM" handled in its own thread.
2018-11-05T16:00:17.804Z,1541433617.804 [Rowe_600LCM ThreadHandler](DEBUG): Created PCaller Thread at 408BF4E0
2018-11-05T16:00:17.805Z,1541433617.805 [Rowe_600LCM ThreadHandler](INFO): Protected caller Thread ID is 9198
2018-11-05T16:00:17.805Z,1541433617.805 [Module Loader](DEBUG): Loaded Module: Sensor (Contains the sensor components)
2018-11-05T16:00:17.806Z,1541433617.806 [Module Loader](DEBUG): Loading Module at Modules/BIT.so
2018-11-05T16:00:17.931Z,1541433617.931 [SBIT](DEBUG): Construct Startup Built In Test.
2018-11-05T16:00:17.952Z,1541433617.952 [SBIT] Loaded
2018-11-05T16:00:17.953Z,1541433617.953 [ComponentRegistry](DEBUG): SyncComponent "SBIT" handled in the control thread.
2018-11-05T16:00:17.953Z,1541433617.953 [IBIT](DEBUG): Construct Initiated Built In Test.
2018-11-05T16:00:17.966Z,1541433617.966 [IBIT] Loaded
2018-11-05T16:00:17.966Z,1541433617.966 [ComponentRegistry](DEBUG): SyncComponent "IBIT" handled in the control thread.
2018-11-05T16:00:17.969Z,1541433617.969 [CBIT](DEBUG): Construct Continuous Built In Test.
2018-11-05T16:00:18.113Z,1541433618.113 [CBIT] Loaded
2018-11-05T16:00:18.113Z,1541433618.113 [ComponentRegistry](DEBUG): SyncComponent "CBIT" handled in the control thread.
2018-11-05T16:00:18.114Z,1541433618.114 [Module Loader](DEBUG): Loaded Module: BIT (Contains the BuiltInTest components, such as C Built In Test)
2018-11-05T16:00:18.114Z,1541433618.114 [Module Loader](DEBUG): Loading Module at Modules/Science.so
2018-11-05T16:00:18.273Z,1541433618.273 [Aanderaa_O2] Loaded
2018-11-05T16:00:18.273Z,1541433618.273 [ComponentRegistry](DEBUG): SyncComponent "Aanderaa_O2" handled in the control thread.
2018-11-05T16:00:18.354Z,1541433618.354 [CTD_NeilBrown] Loaded
2018-11-05T16:00:18.354Z,1541433618.354 [ComponentRegistry](DEBUG): Component "CTD_NeilBrown" handled in its own thread.
2018-11-05T16:00:18.355Z,1541433618.355 [CTD_NeilBrown ThreadHandler](DEBUG): Created PCaller Thread at 4098B4E0
2018-11-05T16:00:18.356Z,1541433618.356 [CTD_NeilBrown ThreadHandler](INFO): Protected caller Thread ID is 9199
2018-11-05T16:00:18.410Z,1541433618.410 [CTD_Seabird] Loaded
2018-11-05T16:00:18.410Z,1541433618.410 [ComponentRegistry](DEBUG): Component "CTD_Seabird" handled in its own thread.
2018-11-05T16:00:18.411Z,1541433618.411 [CTD_Seabird ThreadHandler](DEBUG): Created PCaller Thread at 409BB4E0
2018-11-05T16:00:18.412Z,1541433618.412 [CTD_Seabird ThreadHandler](INFO): Protected caller Thread ID is 9200
2018-11-05T16:00:18.426Z,1541433618.426 [PAR_Licor] Loaded
2018-11-05T16:00:18.426Z,1541433618.426 [ComponentRegistry](DEBUG): SyncComponent "PAR_Licor" handled in the control thread.
2018-11-05T16:00:18.495Z,1541433618.495 [WetLabsBB2FL] Loaded
2018-11-05T16:00:18.495Z,1541433618.495 [ComponentRegistry](DEBUG): Component "WetLabsBB2FL" handled in its own thread.
2018-11-05T16:00:18.496Z,1541433618.496 [WetLabsBB2FL ThreadHandler](DEBUG): Created PCaller Thread at 409EB4E0
2018-11-05T16:00:18.497Z,1541433618.497 [WetLabsBB2FL ThreadHandler](INFO): Protected caller Thread ID is 9201
2018-11-05T16:00:18.497Z,1541433618.497 [Module Loader](DEBUG): Loaded Module: Science (Contains the science components)
2018-11-05T16:00:18.498Z,1541433618.498 [Module Loader](DEBUG): Loading Module at Modules/Control.so
2018-11-05T16:00:18.566Z,1541433618.566 [VerticalControl](DEBUG): Construct VerticalControl.
2018-11-05T16:00:18.652Z,1541433618.652 [VerticalControl] Loaded
2018-11-05T16:00:18.653Z,1541433618.653 [ComponentRegistry](DEBUG): SyncComponent "VerticalControl" handled in the control thread.
2018-11-05T16:00:18.653Z,1541433618.653 [HorizontalControl](DEBUG): Construct HorizontalControl.
2018-11-05T16:00:18.709Z,1541433618.709 [HorizontalControl] Loaded
2018-11-05T16:00:18.709Z,1541433618.709 [ComponentRegistry](DEBUG): SyncComponent "HorizontalControl" handled in the control thread.
2018-11-05T16:00:18.710Z,1541433618.710 [SpeedControl](DEBUG): Construct SpeedControl.
2018-11-05T16:00:18.711Z,1541433618.711 [SpeedControl] Loaded
2018-11-05T16:00:18.711Z,1541433618.711 [ComponentRegistry](DEBUG): SyncComponent "SpeedControl" handled in the control thread.
2018-11-05T16:00:18.712Z,1541433618.712 [LoopControl](DEBUG): Construct LoopControl.
2018-11-05T16:00:18.713Z,1541433618.713 [LoopControl] Loaded
2018-11-05T16:00:18.713Z,1541433618.713 [ComponentRegistry](DEBUG): SyncComponent "LoopControl" handled in the control thread.
2018-11-05T16:00:18.713Z,1541433618.713 [Module Loader](DEBUG): Loaded Module: Control (Contains the Control components, such as Depth, Heading, and Speed Control)
2018-11-05T16:00:18.714Z,1541433618.714 [Module Loader](DEBUG): Loading Module at Modules/Trigger.so
2018-11-05T16:00:18.739Z,1541433618.739 [Module Loader](DEBUG): Loaded Module: Trigger (Contains triggers for use in missions)
2018-11-05T16:00:18.740Z,1541433618.740 [Module Loader](DEBUG): Loading Module at Modules/Navigation.so
2018-11-05T16:00:18.828Z,1541433618.828 [DeadReckonUsingSpeedCalculator] Loaded
2018-11-05T16:00:18.829Z,1541433618.829 [ComponentRegistry](DEBUG): SyncComponent "DeadReckonUsingSpeedCalculator" handled in the control thread.
2018-11-05T16:00:18.844Z,1541433618.844 [NavChart] Loaded
2018-11-05T16:00:18.844Z,1541433618.844 [ComponentRegistry](DEBUG): SyncComponent "NavChart" handled in the control thread.
2018-11-05T16:00:18.848Z,1541433618.848 [UniversalFixResidualReporter] Loaded
2018-11-05T16:00:18.849Z,1541433618.849 [ComponentRegistry](DEBUG): SyncComponent "UniversalFixResidualReporter" handled in the control thread.
2018-11-05T16:00:18.849Z,1541433618.849 [Module Loader](DEBUG): Loaded Module: Navigation (Contains the base navigation components)
2018-11-05T16:00:18.853Z,1541433618.853 [ComponentRegistry](DEBUG): SyncComponent "MissionManager" handled in the control thread.
2018-11-05T16:00:18.854Z,1541433618.854 [ComponentRegistry](DEBUG): SyncComponent "Reporter" handled in the control thread.
2018-11-05T16:00:18.860Z,1541433618.860 [ComponentRegistry](DEBUG): Component "NavChartDb" handled in its own thread.
2018-11-05T16:00:18.861Z,1541433618.861 [NavChartDb ThreadHandler](DEBUG): Created PCaller Thread at 40A774E0
2018-11-05T16:00:18.862Z,1541433618.862 [NavChartDb ThreadHandler](INFO): Protected caller Thread ID is 9202
2018-11-05T16:00:18.866Z,1541433618.866 [Supervisor](INFO): Main Thread ID is 9110
2018-11-05T16:00:18.867Z,1541433618.867 [Supervisor](DEBUG): Running supervisor.
2018-11-05T16:00:18.867Z,1541433618.867 [CommandLine ThreadHandler](INFO): Handler Thread ID is 9203
2018-11-05T16:00:18.870Z,1541433618.870 [controlThread ThreadHandler](INFO): Handler Thread ID is 9204
2018-11-05T16:00:18.870Z,1541433618.870 [controlThread](DEBUG): Initializing ControlThread
2018-11-05T16:00:18.871Z,1541433618.871 [DepthRateCalculator](DEBUG): Initializing DepthRateCalculator.
2018-11-05T16:00:18.871Z,1541433618.871 [PitchRateCalculator](DEBUG): Initializing PitchRateCalculator.
2018-11-05T16:00:18.872Z,1541433618.872 [SpeedCalculator](DEBUG): Initializing SpeedCalculator.
2018-11-05T16:00:18.872Z,1541433618.872 [TempGradientCalculator](DEBUG): Initializing TempGradientCalculator.
2018-11-05T16:00:18.873Z,1541433618.873 [YawRateCalculator](DEBUG): Initializing YawRateCalculator.
2018-11-05T16:00:18.873Z,1541433618.873 [ElevatorOffsetCalculator](DEBUG): Initializing ElevatorOffsetCalculator.
2018-11-05T16:00:18.879Z,1541433618.879 [SBIT](INFO): Initialize SBIT Component.
2018-11-05T16:00:18.879Z,1541433618.879 [SBIT](IMPORTANT): git: 2018-11-05
2018-11-05T16:00:18.880Z,1541433618.880 [SBIT](INFO): git hash: 17f8e4440ddc7f0910aa911cb821ed1a114d9cee
2018-11-05T16:00:18.880Z,1541433618.880 [SBIT](IMPORTANT): Kernel Release: 2.6.27.8
2018-11-05T16:00:18.880Z,1541433618.880 [SBIT](IMPORTANT): Kernel Version:#2 PREEMPT Thu Jan 11 20:13:48 PST 2018
2018-11-05T16:00:18.881Z,1541433618.881 [SBIT](INFO): Beginning SBIT in 36.000000 seconds.
2018-11-05T16:00:18.882Z,1541433618.882 [IBIT](INFO): Initialize IBIT Component.
2018-11-05T16:00:18.883Z,1541433618.883 [CBIT](DEBUG): Initialize CBIT Component.
2018-11-05T16:00:18.883Z,1541433618.883 [CBIT](INFO): Last reboot was NOT due to watchdog timer.
2018-11-05T16:00:18.884Z,1541433618.884 [logger ThreadHandler](INFO): Handler Thread ID is 9205
2018-11-05T16:00:18.901Z,1541433618.901 [Radio_Surface ThreadHandler](INFO): Handler Thread ID is 9206
2018-11-05T16:00:18.907Z,1541433618.907 [Radio_Surface](INFO): Powering up
2018-11-05T16:00:18.913Z,1541433618.913 [Rowe_600LCM ThreadHandler](INFO): Handler Thread ID is 9207
2018-11-05T16:00:18.914Z,1541433618.914 [Rowe_600LCM](INFO): Initializing
2018-11-05T16:00:18.914Z,1541433618.914 [Rowe_600LCM](INFO): Checking LCM
2018-11-05T16:00:18.923Z,1541433618.923 [Rowe_600LCM](INFO): LCM OK
2018-11-05T16:00:18.923Z,1541433618.923 [Rowe_600LCM](INFO): Powering up
2018-11-05T16:00:18.929Z,1541433618.929 [CTD_NeilBrown ThreadHandler](INFO): Handler Thread ID is 9208
2018-11-05T16:00:18.930Z,1541433618.930 [CTD_NeilBrown](INFO): Powering down
2018-11-05T16:00:18.955Z,1541433618.955 [CTD_Seabird ThreadHandler](INFO): Handler Thread ID is 9209
2018-11-05T16:00:18.956Z,1541433618.956 [CTD_Seabird](INFO): Initializing
2018-11-05T16:00:18.957Z,1541433618.957 [CTD_Seabird](INFO): Checking LCM
2018-11-05T16:00:18.957Z,1541433618.957 [CTD_Seabird](INFO): LCM OK
2018-11-05T16:00:18.957Z,1541433618.957 [CTD_Seabird](INFO): Powering up
2018-11-05T16:00:18.969Z,1541433618.969 [WetLabsBB2FL ThreadHandler](INFO): Handler Thread ID is 9210
2018-11-05T16:00:18.970Z,1541433618.970 [WetLabsBB2FL](INFO): Powering down
2018-11-05T16:00:18.993Z,1541433618.993 [VerticalControl](DEBUG): Initialize VerticalControlComponent.
2018-11-05T16:00:18.995Z,1541433618.995 [HorizontalControl](DEBUG): Initialize HorizontalControlComponent.
2018-11-05T16:00:18.996Z,1541433618.996 [SpeedControl](DEBUG): Initialize SpeedControlComponent.
2018-11-05T16:00:18.996Z,1541433618.996 [LoopControl](DEBUG): Initialize LoopControlComponent.
2018-11-05T16:00:18.996Z,1541433618.996 [DeadReckonUsingSpeedCalculator](DEBUG): Initializing DeadReckonUsingSpeedCalculator component.
2018-11-05T16:00:18.997Z,1541433618.997 [DeadReckonUsingSpeedCalculator](INFO): Will consider orientation measurement stale after 120s.
2018-11-05T16:00:18.998Z,1541433618.998 [DeadReckonUsingSpeedCalculator](INFO): Will consider velocity measurement stale after 20s.
2018-11-05T16:00:18.998Z,1541433618.998 [NavChart](DEBUG): Initialize NavChart Navigation.
2018-11-05T16:00:18.999Z,1541433618.999 [UniversalFixResidualReporter](DEBUG): Initializing UniversalFixResidualReporter component.
2018-11-05T16:00:18.000Z,1541433619.000 [MissionManager](INFO): Loading Mission: Missions/Startup.xml
2018-11-05T16:00:19.013Z,1541433619.013 [NavChartDb ThreadHandler](INFO): Handler Thread ID is 9211
2018-11-05T16:00:19.017Z,1541433619.017 [NavChartDb](INFO): Looking for Electronic Nav Chart file at: Resources/ElectronicNavigationCharts/US1WC07M.000
2018-11-05T16:00:19.017Z,1541433619.017 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US1WC07M.000
2018-11-05T16:00:19.017Z,1541433619.017 [NavChartDb](INFO): Looking for Electronic Nav Chart file at: Resources/ElectronicNavigationCharts/US2WC11M.000
2018-11-05T16:00:19.017Z,1541433619.017 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US2WC11M.000
2018-11-05T16:00:19.017Z,1541433619.017 [NavChartDb](INFO): Looking for Electronic Nav Chart file at: Resources/ElectronicNavigationCharts/US3CA52M.000
2018-11-05T16:00:19.018Z,1541433619.018 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US3CA52M.000
2018-11-05T16:00:19.018Z,1541433619.018 [NavChartDb](INFO): Looking for Electronic Nav Chart file at: Resources/ElectronicNavigationCharts/US4CA60M.000
2018-11-05T16:00:19.018Z,1541433619.018 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US4CA60M.000
2018-11-05T16:00:19.018Z,1541433619.018 [NavChartDb](INFO): Looking for Electronic Nav Chart file at: Resources/ElectronicNavigationCharts/US5CA50M.000
2018-11-05T16:00:19.018Z,1541433619.018 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA50M.000
2018-11-05T16:00:19.019Z,1541433619.019 [NavChartDb](INFO): Looking for Electronic Nav Chart file at: Resources/ElectronicNavigationCharts/US5CA61M.000
2018-11-05T16:00:19.019Z,1541433619.019 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA61M.000
2018-11-05T16:00:19.019Z,1541433619.019 [NavChartDb](INFO): Looking for Electronic Nav Chart file at: Resources/ElectronicNavigationCharts/US5CA62M.000
2018-11-05T16:00:19.019Z,1541433619.019 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA62M.000
2018-11-05T16:00:19.019Z,1541433619.019 [NavChartDb](INFO): Looking for Electronic Nav Chart file at: Resources/ElectronicNavigationCharts/US5CA83M.000
2018-11-05T16:00:19.020Z,1541433619.020 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA83M.000
2018-11-05T16:00:19.040Z,1541433619.040 [Startup:A.GoToSurface](DEBUG): Construct GoToSurface.
2018-11-05T16:00:19.076Z,1541433619.076 [MissionManager](DEBUG): 
<?xml version="1.0" encoding="UTF-8"?>
<Mission xmlns="Tethys"
       xmlns:Control="Tethys/Control"
       xmlns:Guidance="Tethys/Guidance" 
       xmlns:Units="Tethys/Units"
       xmlns:Universal="Tethys/Universal"
       xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
       xsi:schemaLocation="Tethys http://okeanids.mbari.org/tethys/Xml/Tethys.xsd
                           Tethys/Control http://okeanids.mbari.org/tethys/Xml/Control.xsd
                           Tethys/Guidance http://okeanids.mbari.org/tethys/Xml/Guidance.xsd
                           Tethys/Units http://okeanids.mbari.org/tethys/Xml/Units.xsd
                           Tethys/Universal http://okeanids.mbari.org/tethys/Xml/Universal.xsd"
       Id="Startup">

    <Guidance:GoToSurface>
        <Progression/>
    </Guidance:GoToSurface>

    <Aggregate Id="StartupSatComms">

        <Sequence/>

        <ReadDatum>
            <Timeout Duration="P1M" />
            <Universal:latitude_fix/>
        </ReadDatum>

        <ReadDatum>
            <Timeout Duration="P1M" />
            <Universal:platform_communications/>
        </ReadDatum>

    </Aggregate>

</Mission>


2018-11-05T16:00:19.093Z,1541433619.093 [MissionManager](INFO): Loading Mission: Missions/Default.xml
2018-11-05T16:00:19.165Z,1541433619.165 [MissionManager](INFO): DefineArg Default.ElapsedSinceDefaultStarted = 0.000000 min
2018-11-05T16:00:19.166Z,1541433619.166 [Default:A.Wait](DEBUG): Construct Wait.
2018-11-05T16:00:19.168Z,1541433619.168 [Default:B.GoToSurface](DEBUG): Construct GoToSurface.
2018-11-05T16:00:19.225Z,1541433619.225 [Default:CheckIn:Read_Iridium:A_Timeout:A.Execute](DEBUG): Construct Execute.
2018-11-05T16:00:19.227Z,1541433619.227 [Default:CheckIn:C.Wait](DEBUG): Construct Wait.
2018-11-05T16:00:19.249Z,1541433619.249 [Default:E.Execute](DEBUG): Construct Execute.
2018-11-05T16:00:19.253Z,1541433619.253 [MissionManager](DEBUG): 
<?xml version="1.0" encoding="UTF-8"?>
<Mission xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
         xmlns="Tethys"
         xmlns:Units="Tethys/Units"
         xmlns:Guidance="Tethys/Guidance"
         xmlns:Universal="Tethys/Universal"
         xsi:schemaLocation="Tethys http://okeanids.mbari.org/tethys/Xml/Tethys.xsd
                             Tethys/Units http://okeanids.mbari.org/tethys/Xml/Units.xsd
                             Tethys/Guidance http://okeanids.mbari.org/tethys/Xml/Guidance.xsd
                             Tethys/Universal http://okeanids.mbari.org/tethys/Xml/Universal.xsd"
         Id="Default">

    <DefineArg Name="ElapsedSinceDefaultStarted"><Units:minute/><Value>0</Value></DefineArg>

    <Guidance:Wait>
        <Description>
            Wait a moment to see if the scheduler starts a new mission before
            starting to actually run Default.
        </Description>
        <Sequence/>
        <Setting><Guidance:Wait.duration/><Units:second/><Value>13</Value></Setting>
    </Guidance:Wait>

    <Guidance:GoToSurface>
        <Progression/>
    </Guidance:GoToSurface>

    <Aggregate Id="CheckIn">

        <Sequence Repeat="288"/>

        <ReadDatum Id="Read_GPS">
            <Timeout Duration="P5M"/>
            <Universal:time_fix/>
        </ReadDatum>

        <ReadDatum Id="Read_Iridium">
            <Timeout Duration="P2H">
                <Guidance:Execute>
                    <Sequence/>
                    <Setting><Guidance:Execute.command/><String>Burn on</String></Setting>
                </Guidance:Execute>
                <Syslog Severity="Critical">Dropped weight due to communications timeout.</Syslog>
            </Timeout>
            <Universal:platform_communications/>
        </ReadDatum>

        <Guidance:Wait>
            <Sequence/>
            <Setting><Guidance:Wait.duration/><Units:minute/><Value>5</Value></Setting>
        </Guidance:Wait>

        <Assign><Sequence/><Arg Name="ElapsedSinceDefaultStarted"/><Elapsed><Universal:mission_started/></Elapsed></Assign>

        <Syslog Severity="Important">Default mission has been running for <Arg Name="ElapsedSinceDefaultStarted"/><Units:minute/></Syslog>

    </Aggregate>

    <Syslog Severity="Important">Restarting logs and Default mission.</Syslog>

    <Guidance:Execute>
        <Sequence/>
        <Setting><Guidance:Execute.command/><String>restart logs</String></Setting>
    </Guidance:Execute>

</Mission>


2018-11-05T16:00:19.265Z,1541433619.265 [controlThread](DEBUG): Component order: CycleStarter,DataOverHttps,Depth_Keller,DropWeight,NAL9602,Onboard,PNI_TCM,Aanderaa_O2,PAR_Licor,Depth_Keller,PAR_Licor,DepthRateCalculator,PitchRateCalculator,SpeedCalculator,TempGradientCalculator,YawRateCalculator,ElevatorOffsetCalculator,DeadReckonUsingSpeedCalculator,NavChart,UniversalFixResidualReporter,MissionManager,VerticalControl,HorizontalControl,SpeedControl,LoopControl,BuoyancyServo,ElevatorServo,MassServo,RudderServo,ThrusterServo,SBIT,IBIT,CBIT,Reporter,LogSplitter,
2018-11-05T16:00:19.289Z,1541433619.289 [DataOverHttps](DEBUG): dashIP=134.89.2.23 starts with a digit so assuming it is a numeric IP
2018-11-05T16:00:19.302Z,1541433619.302 [Depth_Keller](ERROR): Pressure reading out of range: 1831.023193 decibar
2018-11-05T16:00:19.454Z,1541433619.454 [DepthRateCalculator](ERROR): Depth measurement is not active
2018-11-05T16:00:19.678Z,1541433619.678 [BuoyancyServo](DEBUG): Initializing EZServoServo.
2018-11-05T16:00:19.685Z,1541433619.685 [BuoyancyServo](DEBUG): Initializing BuoyancyServo.
2018-11-05T16:00:19.699Z,1541433619.699 [ElevatorServo](DEBUG): Initializing EZServoServo.
2018-11-05T16:00:19.705Z,1541433619.705 [ElevatorServo](DEBUG): Initializing ElevatorServo.
2018-11-05T16:00:19.731Z,1541433619.731 [MassServo](DEBUG): Initializing EZServoServo.
2018-11-05T16:00:19.737Z,1541433619.737 [MassServo](DEBUG): Initializing MassServo.
2018-11-05T16:00:19.743Z,1541433619.743 [RudderServo](DEBUG): Initializing EZServoServo.
2018-11-05T16:00:19.749Z,1541433619.749 [RudderServo](DEBUG): Initializing RudderServo.
2018-11-05T16:00:19.755Z,1541433619.755 [ThrusterServo](DEBUG): Initializing EZServoServo.
2018-11-05T16:00:19.761Z,1541433619.761 [ThrusterServo](DEBUG): Initializing ThrusterServo.
2018-11-05T16:00:23.346Z,1541433623.346 [Rowe_600LCM](INFO): Stopping potential previous instance(s) of Rowe LCM interface
2018-11-05T16:00:23.448Z,1541433623.448 [Rowe_600LCM](INFO): Started Rowe LCM interface with command:nohup ./lrauv-framework/onboard/bin/roweadcp -ldir /mnt/mmc/LRAUV/Logs/latest/ -dev /dev/ttyB4 -b 9600 >& /dev/null &
2018-11-05T16:00:23.526Z,1541433623.526 [Rowe_600LCM](INFO): LCM subscribed to channel:Rowe_600LCM.adcp_dvl.bottom_track
2018-11-05T16:00:23.527Z,1541433623.527 [Rowe_600LCM](INFO): LCM subscribed to channel:Rowe_600LCM.adcp_dvl.vehicle_water_velocity
2018-11-05T16:00:23.527Z,1541433623.527 [Rowe_600LCM](INFO): LCM subscribed to channel:rowe_dvl.rowe
2018-11-05T16:00:24.542Z,1541433624.542 [CTD_Seabird](INFO): Stopping potential previous instance(s) of CTD_Seabird LCM interface
2018-11-05T16:00:24.785Z,1541433624.785 [CTD_Seabird](INFO): Started Seabird LCM interface with command:nohup ./lrauv-framework/onboard/bin/gpctd -ldir /mnt/mmc/LRAUV/Logs/latest/ -dev /dev/ttyC6 -b 9600 >& /dev/null &
2018-11-05T16:00:24.787Z,1541433624.787 [CTD_Seabird](INFO): LCM subscribed to channel:seabird_gpctd_t.seabird-gpctd
2018-11-05T16:00:25.688Z,1541433625.688 [CTD_Seabird](INFO): Stopping potential previous instance(s) of CTD_Seabird LCM interface
2018-11-05T16:00:25.688Z,1541433625.688 [CTD_Seabird](INFO): Powering down
2018-11-05T16:00:31.806Z,1541433631.806 [Aanderaa_O2](INFO): Powering down
2018-11-05T16:00:32.182Z,1541433632.182 [DataOverHttps](INFO): setting available, lastComms_.elapsed()=0.005464
2018-11-05T16:00:47.783Z,1541433647.783 [NAL9602](INFO): Powering up NAL9602
2018-11-05T16:00:55.497Z,1541433655.497 [SBIT](IMPORTANT): Beginning Startup BIT
2018-11-05T16:00:55.501Z,1541433655.501 [CBIT](IMPORTANT): Beginning ground fault scan
2018-11-05T16:00:58.814Z,1541433658.814 [NAL9602](INFO): NAL9602 initialized
2018-11-05T16:01:06.579Z,1541433666.579 [CBIT](IMPORTANT): No ground fault detected
mA:
CHAN A0 (Batt): -0.005521
CHAN A1 (24V): -0.009132
CHAN A2 (12V): -0.001921
CHAN A3 (5V): -0.001335
CHAN B0 (3.3V): 0.000269
CHAN B1 (3.15aV): -0.000202
CHAN B2 (3.15bV): -0.000213
CHAN B3 (GND): -0.000365
OPEN: -0.000680
Full Scale Calc: 4.765 mA, -1.589 mA
2018-11-05T16:01:21.902Z,1541433681.902 [CommandLine](IMPORTANT): got command failComponent
2018-11-05T16:01:21.903Z,1541433681.903 [CommandLine](IMPORTANT): Failed components:
2018-11-05T16:01:21.903Z,1541433681.903 [CommandLine](IMPORTANT): No failed Components.
2018-11-05T16:01:48.706Z,1541433708.706 [SBIT](IMPORTANT): SBIT PASSED
2018-11-05T16:01:48.750Z,1541433708.750 [CommandLine](IMPORTANT): got command configSet list
2018-11-05T16:01:48.750Z,1541433708.750 [CommandLine](IMPORTANT): Listing configuration overrides from Data/persisted.cfg
2018-11-05T16:01:48.751Z,1541433708.751 [CommandLine](IMPORTANT): BPC1.batteryMissingStickThreshold=28 count;

2018-11-05T16:01:48.751Z,1541433708.751 [CommandLine](IMPORTANT): BPC1.batteryMuxCycleTime=10 minute;

2018-11-05T16:01:48.751Z,1541433708.751 [CommandLine](IMPORTANT): Express none VerticalTemperatureHomogeneityIndexCalculator.vertical_temperature_homogeneity_index;

2018-11-05T16:01:48.752Z,1541433708.752 [CommandLine](IMPORTANT): Express linearApproximation height_above_sea_floor 5.000000 meter;

2018-11-05T16:01:48.752Z,1541433708.752 [CommandLine](IMPORTANT): Rowe_600LCM.loadAtStartup=1 bool;

2018-11-05T16:01:48.752Z,1541433708.752 [CommandLine](IMPORTANT): VerticalControl.buoyancyNeutral=213 cubic_centimeter;

2018-11-05T16:01:48.752Z,1541433708.752 [CommandLine](IMPORTANT): VerticalControl.massDefault=4 millimeter;

2018-11-05T16:01:49.163Z,1541433709.163 [MissionManager](IMPORTANT): Started mission Startup
2018-11-05T16:01:49.164Z,1541433709.164 [Startup] Running Loop=1
2018-11-05T16:01:49.164Z,1541433709.164 [Startup](DEBUG): Aggregate::initialize Startup
2018-11-05T16:01:49.164Z,1541433709.164 [Startup:A.GoToSurface] Running Loop=1
2018-11-05T16:01:49.164Z,1541433709.164 [Startup:A.GoToSurface](DEBUG): Initialize GoToSurfaceComponent.
2018-11-05T16:01:49.165Z,1541433709.165 [Startup:A.GoToSurface](DEBUG): No depth rate setting specified. Using default value of nan m/s.
2018-11-05T16:01:49.165Z,1541433709.165 [Startup:A.GoToSurface](DEBUG): No pitch setting specified. Using default value of nan degrees.
2018-11-05T16:01:49.165Z,1541433709.165 [Startup:A.GoToSurface](DEBUG): No speed setting specified. Using default value of 1.000000 m/s.
2018-11-05T16:01:49.166Z,1541433709.166 [Startup:A.GoToSurface](DEBUG): No surface timeout specified. Using default value of 1000.000000 seconds.
2018-11-05T16:01:49.166Z,1541433709.166 [Startup:A.GoToSurface](INFO): Received pitch timeout configuration 60.000000 seconds.
2018-11-05T16:01:49.172Z,1541433709.172 [Startup:StartupSatComms] Running Loop=1
2018-11-05T16:01:49.173Z,1541433709.173 [Startup:StartupSatComms](DEBUG): Aggregate::initialize Startup:StartupSatComms
2018-11-05T16:01:49.173Z,1541433709.173 [Startup:StartupSatComms:A] Running Loop=1
2018-11-05T16:01:49.489Z,1541433709.489 [Startup:StartupSatComms:A](DEBUG): Initialize ReadDataComponent to sense latitude_fix
2018-11-05T16:02:49.309Z,1541433769.309 [Startup:StartupSatComms:A](INFO): Timed out from 2018-11-05T16:01:49.2Z
2018-11-05T16:02:49.309Z,1541433769.309 [Startup:StartupSatComms:A] Stopped
2018-11-05T16:02:49.309Z,1541433769.309 [Startup:StartupSatComms:B] Running Loop=1
2018-11-05T16:02:49.721Z,1541433769.721 [Startup:StartupSatComms:B](DEBUG): Initialize ReadDataComponent to sense platform_communications
2018-11-05T16:02:54.362Z,1541433774.362 [DataOverHttps](INFO): Sending 25 bytes from file Logs/20181105T051059/Courier0004.lzma
2018-11-05T16:02:55.127Z,1541433775.127 [DataOverHttps](INFO): Moved sent file to Logs/20181105T051059/Courier0004.lzma.bak
2018-11-05T16:02:55.127Z,1541433775.127 [DataOverHttps](INFO): SBD MOMSN=8791867
2018-11-05T16:03:05.035Z,1541433785.035 [DataOverHttps](INFO): Sending 360 bytes from file Logs/20181105T051059/Express0005.lzma
2018-11-05T16:03:05.819Z,1541433785.819 [DataOverHttps](INFO): Moved sent file to Logs/20181105T051059/Express0005.lzma.bak
2018-11-05T16:03:05.819Z,1541433785.819 [DataOverHttps](INFO): SBD MOMSN=8791869
2018-11-05T16:03:15.924Z,1541433795.924 [DataOverHttps](INFO): Sending 885 bytes from file Logs/20181105T160011/Express0001.lzma
2018-11-05T16:03:16.701Z,1541433796.701 [DataOverHttps](INFO): Moved sent file to Logs/20181105T160011/Express0001.lzma.bak
2018-11-05T16:03:16.701Z,1541433796.701 [DataOverHttps](INFO): SBD MOMSN=8791879
2018-11-05T16:03:17.246Z,1541433797.246 [Startup:StartupSatComms:B] Stopped
2018-11-05T16:03:17.246Z,1541433797.246 [Startup:StartupSatComms](INFO): Completed Startup:StartupSatComms
2018-11-05T16:03:17.246Z,1541433797.246 [Startup:StartupSatComms] Stopped
2018-11-05T16:03:17.246Z,1541433797.246 [Startup:StartupSatComms](DEBUG): Aggregate::uninitialize Startup:StartupSatComms
2018-11-05T16:03:17.247Z,1541433797.247 [Startup](INFO): Completed Startup
2018-11-05T16:03:17.247Z,1541433797.247 [MissionManager](INFO): Startup is completed.
2018-11-05T16:03:17.247Z,1541433797.247 [MissionManager](INFO): Uninitializing Mission Startup
2018-11-05T16:03:17.247Z,1541433797.247 [Startup] Stopped
2018-11-05T16:03:17.248Z,1541433797.248 [Startup](DEBUG): Aggregate::uninitialize Startup
2018-11-05T16:03:17.248Z,1541433797.248 [Startup:A.GoToSurface] Stopped
2018-11-05T16:03:17.248Z,1541433797.248 [Startup:A.GoToSurface](DEBUG): Uninitialize GoToSurfaceComponent.
2018-11-05T16:03:17.566Z,1541433797.566 [MissionManager](IMPORTANT): Started mission Default
2018-11-05T16:03:17.566Z,1541433797.566 [Default] Running Loop=1
2018-11-05T16:03:17.566Z,1541433797.566 [Default](DEBUG): Aggregate::initialize Default
2018-11-05T16:03:17.566Z,1541433797.566 [Default:B.GoToSurface] Running Loop=1
2018-11-05T16:03:17.566Z,1541433797.566 [Default:B.GoToSurface](DEBUG): Initialize GoToSurfaceComponent.
2018-11-05T16:03:17.567Z,1541433797.567 [Default:B.GoToSurface](DEBUG): No depth rate setting specified. Using default value of nan m/s.
2018-11-05T16:03:17.567Z,1541433797.567 [Default:B.GoToSurface](DEBUG): No pitch setting specified. Using default value of nan degrees.
2018-11-05T16:03:17.567Z,1541433797.567 [Default:B.GoToSurface](DEBUG): No speed setting specified. Using default value of 1.000000 m/s.
2018-11-05T16:03:17.568Z,1541433797.568 [Default:B.GoToSurface](DEBUG): No surface timeout specified. Using default value of 1000.000000 seconds.
2018-11-05T16:03:17.568Z,1541433797.568 [Default:B.GoToSurface](INFO): Received pitch timeout configuration 60.000000 seconds.
2018-11-05T16:03:17.568Z,1541433797.568 [Default:A.Wait] Running Loop=1
2018-11-05T16:03:17.568Z,1541433797.568 [Default:A.Wait](DEBUG): Initialize Wait Component.
2018-11-05T16:03:21.173Z,1541433801.173 [DeadReckonUsingSpeedCalculator](ERROR): Will not write estimated position: latitudeAccuracy_ = nan, longitudeAccuracy_ = nan, depthAccuracy_ = nan
2018-11-05T16:03:21.173Z,1541433801.173 [DeadReckonUsingSpeedCalculator] Software Fault, FailCount= 1
2018-11-05T16:03:21.173Z,1541433801.173 [DeadReckonUsingSpeedCalculator](ERROR): Software Fault
2018-11-05T16:03:21.186Z,1541433801.186 [CBIT](ERROR): Software Fault in component: DeadReckonUsingSpeedCalculator
2018-11-05T16:03:21.327Z,1541433801.327 [CBIT](INFO): Clearing failed state for component DeadReckonUsingSpeedCalculator
2018-11-05T16:03:21.327Z,1541433801.327 [DeadReckonUsingSpeedCalculator] No Fault, FailCount= 1
2018-11-05T16:03:21.679Z,1541433801.679 [DeadReckonUsingSpeedCalculator](DEBUG): Initializing DeadReckonUsingSpeedCalculator component.
2018-11-05T16:03:21.679Z,1541433801.679 [DeadReckonUsingSpeedCalculator](INFO): Will consider orientation measurement stale after 120s.
2018-11-05T16:03:21.680Z,1541433801.680 [DeadReckonUsingSpeedCalculator](INFO): Will consider velocity measurement stale after 20s.
2018-11-05T16:03:26.949Z,1541433806.949 [CommandLine](IMPORTANT): got command failComponent
2018-11-05T16:03:26.949Z,1541433806.949 [CommandLine](IMPORTANT): Failed components:
2018-11-05T16:03:26.950Z,1541433806.950 [CommandLine](IMPORTANT): No failed Components.
2018-11-05T16:03:30.851Z,1541433810.851 [Default:A.Wait](INFO): Done Waiting.
2018-11-05T16:03:30.851Z,1541433810.851 [Default:A.Wait] Stopped
2018-11-05T16:03:30.851Z,1541433810.851 [Default:A.Wait](DEBUG): Uninitialize Wait Component.
2018-11-05T16:03:31.246Z,1541433811.246 [Default:CheckIn] Running Loop=1
2018-11-05T16:03:31.247Z,1541433811.247 [Default:CheckIn](DEBUG): Aggregate::initialize Default:CheckIn
2018-11-05T16:03:31.247Z,1541433811.247 [Default:CheckIn:Read_GPS] Running Loop=1
2018-11-05T16:03:31.631Z,1541433811.631 [Default:CheckIn:Read_GPS](DEBUG): Initialize ReadDataComponent to sense time_fix
2018-11-05T16:04:02.785Z,1541433842.785 [Rowe_600LCM](FAULT): Did not receive valid device response within the specified allowable sample time.
2018-11-05T16:04:02.785Z,1541433842.785 [Rowe_600LCM] Communications Fault, FailCount= 1
2018-11-05T16:04:02.785Z,1541433842.785 [Rowe_600LCM](ERROR): Communications Fault
2018-11-05T16:04:02.881Z,1541433842.881 [CBIT](ERROR): Communications Fault in component: Rowe_600LCM
2018-11-05T16:04:03.197Z,1541433843.197 [Rowe_600LCM](INFO): Stopping potential previous instance(s) of roweadcp LCM interface
2018-11-05T16:04:03.406Z,1541433843.406 [Rowe_600LCM](INFO): Powering down
2018-11-05T16:04:04.213Z,1541433844.213 [Rowe_600LCM](FAULT): LCB fault:  Software Overcurrent.
2018-11-05T16:04:04.213Z,1541433844.213 [Rowe_600LCM] Hardware Fault, FailCount= 1
2018-11-05T16:04:04.213Z,1541433844.213 [Rowe_600LCM](ERROR): Hardware Fault
2018-11-05T16:04:04.896Z,1541433844.896 [CBIT](INFO): Clearing failed state for component Rowe_600LCM
2018-11-05T16:04:04.896Z,1541433844.896 [Rowe_600LCM] No Fault, FailCount= 1
2018-11-05T16:04:05.021Z,1541433845.021 [Rowe_600LCM](INFO): Initializing
2018-11-05T16:04:05.022Z,1541433845.022 [Rowe_600LCM](INFO): Checking LCM
2018-11-05T16:04:05.022Z,1541433845.022 [Rowe_600LCM](INFO): LCM OK
2018-11-05T16:04:05.022Z,1541433845.022 [Rowe_600LCM](INFO): Powering up
2018-11-05T16:04:09.150Z,1541433849.150 [Rowe_600LCM](INFO): Stopping potential previous instance(s) of Rowe LCM interface
2018-11-05T16:04:09.306Z,1541433849.306 [Rowe_600LCM](INFO): Started Rowe LCM interface with command:nohup ./lrauv-framework/onboard/bin/roweadcp -ldir /mnt/mmc/LRAUV/Logs/latest/ -dev /dev/ttyB4 -b 9600 >& /dev/null &
2018-11-05T16:04:09.308Z,1541433849.308 [Rowe_600LCM](INFO): LCM subscribed to channel:Rowe_600LCM.adcp_dvl.bottom_track
2018-11-05T16:04:09.308Z,1541433849.308 [Rowe_600LCM](INFO): LCM subscribed to channel:Rowe_600LCM.adcp_dvl.vehicle_water_velocity
2018-11-05T16:04:09.310Z,1541433849.310 [Rowe_600LCM](INFO): LCM subscribed to channel:rowe_dvl.rowe
2018-11-05T16:04:35.667Z,1541433875.667 [CommandLine](IMPORTANT): got command configSet Rowe_600LCM.loadAtStartup 0.000000 bool
2018-11-05T16:04:35.667Z,1541433875.667 [CommandLine](FAULT): configSet Rowe_600LCM.loadAtStartup without persist will have no effect.
2018-11-05T16:04:35.982Z,1541433875.982 [Rowe_600LCM](IMPORTANT): Stopping now due to load at startup. No immediate restart required.
2018-11-05T16:04:35.982Z,1541433875.982 [Rowe_600LCM](INFO): Stopping potential previous instance(s) of roweadcp LCM interface
2018-11-05T16:04:36.213Z,1541433876.213 [Rowe_600LCM](INFO): Powering down
2018-11-05T16:06:02.330Z,1541433962.330 [NAL9602](FAULT): MT Queue status failed to be acquired within timeout. Will not retry this session.
2018-11-05T16:06:07.795Z,1541433967.795 [CommandLine](IMPORTANT): got command maintain control VerticalControl.buoyancyAction 200.000000 cubic_centimeter
2018-11-05T16:06:07.797Z,1541433967.797 [ComponentRegistry](DEBUG): SyncComponent "Maintain_VerticalControl.buoyancyAction" handled in the control thread.
2018-11-05T16:06:07.996Z,1541433967.996 [controlThread](DEBUG): Component order: CycleStarter,DataOverHttps,Depth_Keller,DropWeight,NAL9602,Onboard,PNI_TCM,Aanderaa_O2,PAR_Licor,Depth_Keller,PAR_Licor,DepthRateCalculator,PitchRateCalculator,SpeedCalculator,TempGradientCalculator,YawRateCalculator,ElevatorOffsetCalculator,DeadReckonUsingSpeedCalculator,NavChart,UniversalFixResidualReporter,MissionManager,VerticalControl,HorizontalControl,SpeedControl,LoopControl,Maintain_VerticalControl.buoyancyAction,BuoyancyServo,ElevatorServo,MassServo,RudderServo,ThrusterServo,SBIT,IBIT,CBIT,Reporter,LogSplitter,
2018-11-05T16:06:20.458Z,1541433980.458 [CommandLine](IMPORTANT): got command report touch platform_buoyancy_position
2018-11-05T16:06:21.698Z,1541433981.698 [DeadReckonUsingSpeedCalculator](ERROR): Will not write estimated position: latitudeAccuracy_ = nan, longitudeAccuracy_ = nan, depthAccuracy_ = nan
2018-11-05T16:06:21.698Z,1541433981.698 [DeadReckonUsingSpeedCalculator] Software Fault, FailCount= 2
2018-11-05T16:06:21.698Z,1541433981.698 [DeadReckonUsingSpeedCalculator](ERROR): Software Fault
2018-11-05T16:06:21.774Z,1541433981.774 [CBIT](ERROR): Software Fault in component: DeadReckonUsingSpeedCalculator
2018-11-05T16:06:21.785Z,1541433981.785 [Reporter](INFO): platform_buoyancy_position 836.141699 cc
2018-11-05T16:06:21.902Z,1541433981.902 [CBIT](INFO): Clearing failed state for component DeadReckonUsingSpeedCalculator
2018-11-05T16:06:21.903Z,1541433981.903 [DeadReckonUsingSpeedCalculator] No Fault, FailCount= 2
2018-11-05T16:06:21.904Z,1541433981.904 [Reporter](INFO): platform_buoyancy_position 833.992905 cc
2018-11-05T16:06:22.239Z,1541433982.239 [DeadReckonUsingSpeedCalculator](DEBUG): Initializing DeadReckonUsingSpeedCalculator component.
2018-11-05T16:06:22.239Z,1541433982.239 [DeadReckonUsingSpeedCalculator](INFO): Will consider orientation measurement stale after 120s.
2018-11-05T16:06:22.239Z,1541433982.239 [DeadReckonUsingSpeedCalculator](INFO): Will consider velocity measurement stale after 20s.
2018-11-05T16:06:22.299Z,1541433982.299 [Reporter](INFO): platform_buoyancy_position 828.620978 cc
2018-11-05T16:06:22.703Z,1541433982.703 [Reporter](INFO): platform_buoyancy_position 823.383220 cc
2018-11-05T16:06:23.092Z,1541433983.092 [Reporter](INFO): platform_buoyancy_position 818.951346 cc
2018-11-05T16:06:23.511Z,1541433983.511 [Reporter](INFO): platform_buoyancy_position 812.639249 cc
2018-11-05T16:06:23.891Z,1541433983.891 [Reporter](INFO): platform_buoyancy_position 808.207318 cc
2018-11-05T16:06:24.306Z,1541433984.306 [Reporter](INFO): platform_buoyancy_position 801.760936 cc
2018-11-05T16:06:24.703Z,1541433984.703 [Reporter](INFO): platform_buoyancy_position 797.463290 cc
2018-11-05T16:06:25.113Z,1541433985.113 [Reporter](INFO): platform_buoyancy_position 791.151251 cc
2018-11-05T16:06:25.503Z,1541433985.503 [Reporter](INFO): platform_buoyancy_position 786.719378 cc
2018-11-05T16:06:25.903Z,1541433985.903 [Reporter](INFO): platform_buoyancy_position 780.407223 cc
2018-11-05T16:06:26.299Z,1541433986.299 [Reporter](INFO): platform_buoyancy_position 776.109635 cc
2018-11-05T16:06:26.679Z,1541433986.679 [Reporter](INFO): platform_buoyancy_position 771.677762 cc
2018-11-05T16:06:27.119Z,1541433987.119 [Reporter](INFO): platform_buoyancy_position 765.365665 cc
2018-11-05T16:06:27.519Z,1541433987.519 [Reporter](INFO): platform_buoyancy_position 760.665163 cc
2018-11-05T16:06:27.891Z,1541433987.891 [Reporter](INFO): platform_buoyancy_position 754.755922 cc
2018-11-05T16:06:28.291Z,1541433988.291 [Reporter](INFO): platform_buoyancy_position 750.189763 cc
2018-11-05T16:06:28.696Z,1541433988.696 [Reporter](INFO): platform_buoyancy_position 744.280522 cc
2018-11-05T16:06:29.091Z,1541433989.091 [Reporter](INFO): platform_buoyancy_position 739.445735 cc
2018-11-05T16:06:29.507Z,1541433989.507 [Reporter](INFO): platform_buoyancy_position 735.013862 cc
2018-11-05T16:06:29.903Z,1541433989.903 [Reporter](INFO): platform_buoyancy_position 728.836050 cc
2018-11-05T16:06:30.315Z,1541433990.315 [Reporter](INFO): platform_buoyancy_position 723.061152 cc
2018-11-05T16:06:30.707Z,1541433990.707 [Reporter](INFO): platform_buoyancy_position 718.092022 cc
2018-11-05T16:06:31.119Z,1541433991.119 [Reporter](INFO): platform_buoyancy_position 713.794434 cc
2018-11-05T16:06:31.516Z,1541433991.516 [Reporter](INFO): platform_buoyancy_position 707.347994 cc
2018-11-05T16:06:31.883Z,1541433991.883 [Reporter](INFO): platform_buoyancy_position 702.916121 cc
2018-11-05T16:06:32.315Z,1541433992.315 [Reporter](INFO): platform_buoyancy_position 696.604024 cc
2018-11-05T16:06:32.680Z,1541433992.680 [Reporter](INFO): platform_buoyancy_position 692.306436 cc
2018-11-05T16:06:33.119Z,1541433993.119 [Reporter](INFO): platform_buoyancy_position 686.397194 cc
2018-11-05T16:06:33.503Z,1541433993.503 [Reporter](INFO): platform_buoyancy_position 681.562466 cc
2018-11-05T16:06:33.903Z,1541433993.903 [Reporter](INFO): platform_buoyancy_position 677.130534 cc
2018-11-05T16:06:34.291Z,1541433994.291 [Reporter](INFO): platform_buoyancy_position 670.818437 cc
2018-11-05T16:06:34.715Z,1541433994.715 [Reporter](INFO): platform_buoyancy_position 666.386564 cc
2018-11-05T16:06:35.099Z,1541433995.099 [Reporter](INFO): platform_buoyancy_position 660.343037 cc
2018-11-05T16:06:35.491Z,1541433995.491 [Reporter](INFO): platform_buoyancy_position 655.776879 cc
2018-11-05T16:06:35.907Z,1541433995.907 [Reporter](INFO): platform_buoyancy_position 649.330439 cc
2018-11-05T16:06:36.315Z,1541433996.315 [Reporter](INFO): platform_buoyancy_position 644.898508 cc
2018-11-05T16:06:36.716Z,1541433996.716 [Reporter](INFO): platform_buoyancy_position 638.586411 cc
2018-11-05T16:06:37.119Z,1541433997.119 [Reporter](INFO): platform_buoyancy_position 634.154538 cc
2018-11-05T16:06:37.496Z,1541433997.496 [Reporter](INFO): platform_buoyancy_position 629.856950 cc
2018-11-05T16:06:37.883Z,1541433997.883 [Reporter](INFO): platform_buoyancy_position 623.544795 cc
2018-11-05T16:06:38.296Z,1541433998.296 [Reporter](INFO): platform_buoyancy_position 619.112921 cc
2018-11-05T16:06:38.703Z,1541433998.703 [Reporter](INFO): platform_buoyancy_position 612.800824 cc
2018-11-05T16:06:39.104Z,1541433999.104 [Reporter](INFO): platform_buoyancy_position 608.368893 cc
2018-11-05T16:06:39.509Z,1541433999.509 [Reporter](INFO): platform_buoyancy_position 602.056796 cc
2018-11-05T16:06:39.912Z,1541433999.912 [Reporter](INFO): platform_buoyancy_position 597.624923 cc
2018-11-05T16:06:40.299Z,1541434000.299 [Reporter](INFO): platform_buoyancy_position 593.193050 cc
2018-11-05T16:06:40.695Z,1541434000.695 [Reporter](INFO): platform_buoyancy_position 589.029747 cc
2018-11-05T16:06:41.087Z,1541434001.087 [Reporter](INFO): platform_buoyancy_position 582.583307 cc
2018-11-05T16:06:41.479Z,1541434001.479 [Reporter](INFO): platform_buoyancy_position 578.151434 cc
2018-11-05T16:06:41.895Z,1541434001.895 [Reporter](INFO): platform_buoyancy_position 571.973622 cc
2018-11-05T16:06:42.311Z,1541434002.311 [Reporter](INFO): platform_buoyancy_position 565.527240 cc
2018-11-05T16:06:42.715Z,1541434002.715 [Reporter](INFO): platform_buoyancy_position 561.229594 cc
2018-11-05T16:06:43.115Z,1541434003.115 [Reporter](INFO): platform_buoyancy_position 554.783212 cc
2018-11-05T16:06:43.491Z,1541434003.491 [Reporter](INFO): platform_buoyancy_position 550.351338 cc
2018-11-05T16:06:43.895Z,1541434003.895 [Reporter](INFO): platform_buoyancy_position 545.113639 cc
2018-11-05T16:06:44.279Z,1541434004.279 [Reporter](INFO): platform_buoyancy_position 539.607310 cc
2018-11-05T16:06:44.699Z,1541434004.699 [Reporter](INFO): platform_buoyancy_position 534.906809 cc
2018-11-05T16:06:45.111Z,1541434005.111 [Reporter](INFO): platform_buoyancy_position 528.997625 cc
2018-11-05T16:06:45.523Z,1541434005.523 [Reporter](INFO): platform_buoyancy_position 523.491355 cc
2018-11-05T16:06:45.891Z,1541434005.891 [Reporter](INFO): platform_buoyancy_position 518.253597 cc
2018-11-05T16:06:46.287Z,1541434006.287 [Reporter](INFO): platform_buoyancy_position 513.956009 cc
2018-11-05T16:06:46.701Z,1541434006.701 [Reporter](INFO): platform_buoyancy_position 507.509685 cc
2018-11-05T16:06:47.107Z,1541434007.107 [Reporter](INFO): platform_buoyancy_position 503.077754 cc
2018-11-05T16:06:47.497Z,1541434007.497 [Reporter](INFO): platform_buoyancy_position 498.780108 cc
2018-11-05T16:06:47.909Z,1541434007.909 [Reporter](INFO): platform_buoyancy_position 492.468069 cc
2018-11-05T16:06:48.307Z,1541434008.307 [Reporter](INFO): platform_buoyancy_position 487.767538 cc
2018-11-05T16:06:48.708Z,1541434008.708 [Reporter](INFO): platform_buoyancy_position 481.724041 cc
2018-11-05T16:06:49.130Z,1541434009.130 [Reporter](INFO): platform_buoyancy_position 477.292138 cc
2018-11-05T16:06:49.479Z,1541434009.479 [Reporter](INFO): platform_buoyancy_position 472.323038 cc
2018-11-05T16:06:49.895Z,1541434009.895 [Reporter](INFO): platform_buoyancy_position 466.682453 cc
2018-11-05T16:06:50.311Z,1541434010.311 [Reporter](INFO): platform_buoyancy_position 460.236042 cc
2018-11-05T16:06:50.683Z,1541434010.683 [Reporter](INFO): platform_buoyancy_position 456.207054 cc
2018-11-05T16:06:51.103Z,1541434011.103 [Reporter](INFO): platform_buoyancy_position 451.506552 cc
2018-11-05T16:06:51.499Z,1541434011.499 [Reporter](INFO): platform_buoyancy_position 446.940336 cc
2018-11-05T16:06:51.907Z,1541434011.907 [Reporter](INFO): platform_buoyancy_position 440.762553 cc
2018-11-05T16:06:52.299Z,1541434012.299 [Reporter](INFO): platform_buoyancy_position 434.450456 cc
2018-11-05T16:06:52.721Z,1541434012.721 [Reporter](INFO): platform_buoyancy_position 430.018525 cc
2018-11-05T16:06:53.071Z,1541434013.071 [Reporter](INFO): platform_buoyancy_position 425.720908 cc
2018-11-05T16:06:53.507Z,1541434013.507 [Reporter](INFO): platform_buoyancy_position 419.274555 cc
2018-11-05T16:06:53.889Z,1541434013.889 [Reporter](INFO): platform_buoyancy_position 415.111223 cc
2018-11-05T16:06:54.319Z,1541434014.319 [Reporter](INFO): platform_buoyancy_position 408.664870 cc
2018-11-05T16:06:54.715Z,1541434014.715 [Reporter](INFO): platform_buoyancy_position 404.098624 cc
2018-11-05T16:06:55.119Z,1541434015.119 [Reporter](INFO): platform_buoyancy_position 397.920841 cc
2018-11-05T16:06:55.485Z,1541434015.485 [Reporter](INFO): platform_buoyancy_position 393.623224 cc
2018-11-05T16:06:55.903Z,1541434015.903 [Reporter](INFO): platform_buoyancy_position 387.176842 cc
2018-11-05T16:06:56.307Z,1541434016.307 [Reporter](INFO): platform_buoyancy_position 382.744940 cc
2018-11-05T16:06:56.687Z,1541434016.687 [Reporter](INFO): platform_buoyancy_position 376.432843 cc
2018-11-05T16:06:57.093Z,1541434017.093 [Reporter](INFO): platform_buoyancy_position 372.000941 cc
2018-11-05T16:06:57.506Z,1541434017.506 [Reporter](INFO): platform_buoyancy_position 367.703353 cc
2018-11-05T16:06:57.915Z,1541434017.915 [Reporter](INFO): platform_buoyancy_position 361.391227 cc
2018-11-05T16:06:58.316Z,1541434018.316 [Reporter](INFO): platform_buoyancy_position 356.556440 cc
2018-11-05T16:06:58.677Z,1541434018.677 [Reporter](INFO): platform_buoyancy_position 350.647257 cc
2018-11-05T16:06:59.103Z,1541434019.103 [Reporter](INFO): platform_buoyancy_position 346.349640 cc
2018-11-05T16:06:59.503Z,1541434019.503 [Reporter](INFO): platform_buoyancy_position 340.037543 cc
2018-11-05T16:06:59.908Z,1541434019.908 [Reporter](INFO): platform_buoyancy_position 335.605611 cc
2018-11-05T16:07:00.287Z,1541434020.287 [Reporter](INFO): platform_buoyancy_position 331.173738 cc
2018-11-05T16:07:00.711Z,1541434020.711 [Reporter](INFO): platform_buoyancy_position 324.727327 cc
2018-11-05T16:07:01.123Z,1541434021.123 [Reporter](INFO): platform_buoyancy_position 320.429739 cc
2018-11-05T16:07:01.492Z,1541434021.492 [Reporter](INFO): platform_buoyancy_position 313.983328 cc
2018-11-05T16:07:01.892Z,1541434021.892 [Reporter](INFO): platform_buoyancy_position 309.954339 cc
2018-11-05T16:07:02.300Z,1541434022.300 [Reporter](INFO): platform_buoyancy_position 305.119524 cc
2018-11-05T16:07:02.695Z,1541434022.695 [Reporter](INFO): platform_buoyancy_position 298.941741 cc
2018-11-05T16:07:03.123Z,1541434023.123 [Reporter](INFO): platform_buoyancy_position 292.629644 cc
2018-11-05T16:07:03.337Z,1541434023.337 [CommandLine](IMPORTANT): got command maintain clear
2018-11-05T16:07:03.532Z,1541434023.532 [Reporter](INFO): platform_buoyancy_position 288.197713 cc
2018-11-05T16:07:03.539Z,1541434023.539 [controlThread](DEBUG): Component order: CycleStarter,DataOverHttps,Depth_Keller,DropWeight,NAL9602,Onboard,PNI_TCM,Aanderaa_O2,PAR_Licor,Depth_Keller,PAR_Licor,DepthRateCalculator,PitchRateCalculator,SpeedCalculator,TempGradientCalculator,YawRateCalculator,ElevatorOffsetCalculator,DeadReckonUsingSpeedCalculator,NavChart,UniversalFixResidualReporter,MissionManager,VerticalControl,HorizontalControl,SpeedControl,LoopControl,BuoyancyServo,ElevatorServo,MassServo,RudderServo,ThrusterServo,SBIT,IBIT,CBIT,Reporter,LogSplitter,
2018-11-05T16:07:03.955Z,1541434023.955 [Reporter](INFO): platform_buoyancy_position 281.885616 cc
2018-11-05T16:07:04.335Z,1541434024.335 [Reporter](INFO): platform_buoyancy_position 277.588057 cc
2018-11-05T16:07:04.707Z,1541434024.707 [Reporter](INFO): platform_buoyancy_position 275.707833 cc
2018-11-05T16:07:05.077Z,1541434025.077 [Reporter](INFO): platform_buoyancy_position 275.439234 cc
2018-11-05T16:07:05.513Z,1541434025.513 [Reporter](INFO): platform_buoyancy_position 277.588057 cc
2018-11-05T16:07:05.887Z,1541434025.887 [Reporter](INFO): platform_buoyancy_position 281.751330 cc
2018-11-05T16:07:06.311Z,1541434026.311 [Reporter](INFO): platform_buoyancy_position 286.048918 cc
2018-11-05T16:07:06.739Z,1541434026.739 [Reporter](INFO): platform_buoyancy_position 290.346536 cc
2018-11-05T16:07:07.119Z,1541434027.119 [Reporter](INFO): platform_buoyancy_position 294.912723 cc
2018-11-05T16:07:07.489Z,1541434027.489 [Reporter](INFO): platform_buoyancy_position 299.210340 cc
2018-11-05T16:07:07.899Z,1541434027.899 [Reporter](INFO): platform_buoyancy_position 305.388123 cc
2018-11-05T16:07:08.299Z,1541434028.299 [Reporter](INFO): platform_buoyancy_position 309.820025 cc
2018-11-05T16:07:08.669Z,1541434028.669 [Reporter](INFO): platform_buoyancy_position 314.117642 cc
2018-11-05T16:07:09.111Z,1541434029.111 [Reporter](INFO): platform_buoyancy_position 320.429739 cc
2018-11-05T16:07:09.515Z,1541434029.515 [Reporter](INFO): platform_buoyancy_position 325.264526 cc
2018-11-05T16:07:09.911Z,1541434029.911 [Reporter](INFO): platform_buoyancy_position 331.308052 cc
2018-11-05T16:07:10.311Z,1541434030.311 [Reporter](INFO): platform_buoyancy_position 335.739926 cc
2018-11-05T16:07:10.690Z,1541434030.690 [Reporter](INFO): platform_buoyancy_position 341.917737 cc
2018-11-05T16:07:11.099Z,1541434031.099 [Reporter](INFO): platform_buoyancy_position 346.349640 cc
2018-11-05T16:07:11.495Z,1541434031.495 [Reporter](INFO): platform_buoyancy_position 352.661737 cc
2018-11-05T16:07:11.893Z,1541434031.893 [Reporter](INFO): platform_buoyancy_position 357.093639 cc
2018-11-05T16:07:12.315Z,1541434032.315 [Reporter](INFO): platform_buoyancy_position 363.540050 cc
2018-11-05T16:07:12.695Z,1541434032.695 [Reporter](INFO): platform_buoyancy_position 367.837638 cc
2018-11-05T16:07:13.115Z,1541434033.115 [Reporter](INFO): platform_buoyancy_position 374.284020 cc
2018-11-05T16:07:13.475Z,1541434033.475 [Reporter](INFO): platform_buoyancy_position 378.581637 cc
2018-11-05T16:07:13.895Z,1541434033.895 [Reporter](INFO): platform_buoyancy_position 384.759420 cc
2018-11-05T16:07:14.311Z,1541434034.311 [Reporter](INFO): platform_buoyancy_position 389.325665 cc
2018-11-05T16:07:14.678Z,1541434034.678 [Reporter](INFO): platform_buoyancy_position 394.563365 cc
2018-11-05T16:07:15.115Z,1541434035.115 [Reporter](INFO): platform_buoyancy_position 400.069635 cc
2018-11-05T16:07:15.507Z,1541434035.507 [Reporter](INFO): platform_buoyancy_position 404.904451 cc
2018-11-05T16:07:15.899Z,1541434035.899 [Reporter](INFO): platform_buoyancy_position 410.679349 cc
2018-11-05T16:07:16.299Z,1541434036.299 [Reporter](INFO): platform_buoyancy_position 415.245508 cc
2018-11-05T16:07:16.692Z,1541434036.692 [Reporter](INFO): platform_buoyancy_position 421.423378 cc
2018-11-05T16:07:17.091Z,1541434037.091 [Reporter](INFO): platform_buoyancy_position 425.720908 cc
2018-11-05T16:07:17.507Z,1541434037.507 [Reporter](INFO): platform_buoyancy_position 432.167319 cc
2018-11-05T16:07:17.899Z,1541434037.899 [Reporter](INFO): platform_buoyancy_position 436.599279 cc
2018-11-05T16:07:18.295Z,1541434038.295 [Reporter](INFO): platform_buoyancy_position 441.165437 cc
2018-11-05T16:07:18.707Z,1541434038.707 [Reporter](INFO): platform_buoyancy_position 447.343220 cc
2018-11-05T16:07:21.823Z,1541434041.823 [Reporter](INFO): platform_buoyancy_position 488.036167 cc
2018-11-05T16:07:21.966Z,1541434041.966 [Reporter](INFO): platform_buoyancy_position 490.319217 cc
2018-11-05T16:07:22.331Z,1541434042.331 [Reporter](INFO): platform_buoyancy_position 494.751148 cc
2018-11-05T16:07:22.735Z,1541434042.735 [Reporter](INFO): platform_buoyancy_position 500.928902 cc
2018-11-05T16:07:23.143Z,1541434043.143 [Reporter](INFO): platform_buoyancy_position 505.360891 cc
2018-11-05T16:07:23.539Z,1541434043.539 [Reporter](INFO): platform_buoyancy_position 511.672930 cc
2018-11-05T16:07:23.947Z,1541434043.947 [Reporter](INFO): platform_buoyancy_position 516.104803 cc
2018-11-05T16:07:24.323Z,1541434044.323 [Reporter](INFO): platform_buoyancy_position 520.402391 cc
2018-11-05T16:07:24.739Z,1541434044.739 [Reporter](INFO): platform_buoyancy_position 526.714546 cc
2018-11-05T16:07:25.143Z,1541434045.143 [Reporter](INFO): platform_buoyancy_position 531.280704 cc
2018-11-05T16:07:25.539Z,1541434045.539 [Reporter](INFO): platform_buoyancy_position 537.458516 cc
2018-11-05T16:07:25.947Z,1541434045.947 [Reporter](INFO): platform_buoyancy_position 541.890447 cc
2018-11-05T16:07:26.351Z,1541434046.351 [Reporter](INFO): platform_buoyancy_position 548.336771 cc
2018-11-05T16:07:26.739Z,1541434046.739 [Reporter](INFO): platform_buoyancy_position 552.634418 cc
2018-11-05T16:07:27.143Z,1541434047.143 [Reporter](INFO): platform_buoyancy_position 558.275031 cc
2018-11-05T16:07:27.557Z,1541434047.557 [Reporter](INFO): platform_buoyancy_position 563.378446 cc
2018-11-05T16:07:27.947Z,1541434047.947 [Reporter](INFO): platform_buoyancy_position 569.153344 cc
2018-11-05T16:07:28.331Z,1541434048.331 [Reporter](INFO): platform_buoyancy_position 574.122416 cc
2018-11-05T16:07:28.735Z,1541434048.735 [Reporter](INFO): platform_buoyancy_position 578.285719 cc
2018-11-05T16:07:29.135Z,1541434049.135 [Reporter](INFO): platform_buoyancy_position 584.732101 cc
2018-11-05T16:07:29.446Z,1541434049.446 [NAL9602](INFO): GPS fix at 20181105T160710: (36.802737, -121.788154)
2018-11-05T16:07:29.487Z,1541434049.487 [Default:CheckIn:Read_GPS] Stopped
2018-11-05T16:07:29.487Z,1541434049.487 [Default:CheckIn:Read_Iridium] Running Loop=1
2018-11-05T16:07:29.551Z,1541434049.551 [Reporter](INFO): platform_buoyancy_position 589.163974 cc
2018-11-05T16:07:29.937Z,1541434049.937 [Default:CheckIn:Read_Iridium](DEBUG): Initialize ReadDataComponent to sense platform_communications
2018-11-05T16:07:29.989Z,1541434049.989 [Reporter](INFO): platform_buoyancy_position 593.595963 cc
2018-11-05T16:07:30.395Z,1541434050.395 [Reporter](INFO): platform_buoyancy_position 599.908002 cc
2018-11-05T16:07:30.784Z,1541434050.784 [Reporter](INFO): platform_buoyancy_position 606.220157 cc
2018-11-05T16:07:35.651Z,1541434055.651 [Reporter](INFO): platform_buoyancy_position 668.669643 cc
2018-11-05T16:07:35.669Z,1541434055.669 [DataOverHttps](INFO): Sending 215 bytes from file Logs/20181105T160011/Courier0004.lzma
2018-11-05T16:07:35.816Z,1541434055.816 [Reporter](INFO): platform_buoyancy_position 671.087008 cc
2018-11-05T16:07:36.168Z,1541434056.168 [Reporter](INFO): platform_buoyancy_position 677.130534 cc
2018-11-05T16:07:36.459Z,1541434056.459 [DataOverHttps](INFO): Moved sent file to Logs/20181105T160011/Courier0004.lzma.bak
2018-11-05T16:07:36.459Z,1541434056.459 [DataOverHttps](INFO): SBD MOMSN=8791903
2018-11-05T16:07:36.567Z,1541434056.567 [Reporter](INFO): platform_buoyancy_position 681.562466 cc
2018-11-05T16:07:37.091Z,1541434057.091 [Reporter](INFO): platform_buoyancy_position 688.008848 cc
2018-11-05T16:07:37.351Z,1541434057.351 [Reporter](INFO): platform_buoyancy_position 692.172092 cc
2018-11-05T16:07:40.764Z,1541434060.764 [Reporter](INFO): platform_buoyancy_position 735.416776 cc
2018-11-05T16:07:40.907Z,1541434060.907 [Reporter](INFO): platform_buoyancy_position 737.834082 cc
2018-11-05T16:07:41.307Z,1541434061.307 [Reporter](INFO): platform_buoyancy_position 743.877608 cc
2018-11-05T16:07:41.719Z,1541434061.719 [Reporter](INFO): platform_buoyancy_position 748.309481 cc
2018-11-05T16:07:42.107Z,1541434062.107 [Reporter](INFO): platform_buoyancy_position 754.621637 cc
2018-11-05T16:07:42.474Z,1541434062.474 [Reporter](INFO): platform_buoyancy_position 758.784940 cc
2018-11-05T16:07:46.387Z,1541434066.387 [Reporter](INFO): platform_buoyancy_position 810.356112 cc
2018-11-05T16:07:46.398Z,1541434066.398 [DataOverHttps](INFO): Sending 680 bytes from file Logs/20181105T160011/Express0005.lzma
2018-11-05T16:07:46.535Z,1541434066.535 [Reporter](INFO): platform_buoyancy_position 812.639249 cc
2018-11-05T16:07:46.903Z,1541434066.903 [Reporter](INFO): platform_buoyancy_position 816.802552 cc
2018-11-05T16:07:47.195Z,1541434067.195 [DataOverHttps](INFO): Moved sent file to Logs/20181105T160011/Express0005.lzma.bak
2018-11-05T16:07:47.195Z,1541434067.195 [DataOverHttps](INFO): SBD MOMSN=8791906
2018-11-05T16:07:47.308Z,1541434067.308 [Reporter](INFO): platform_buoyancy_position 823.248934 cc
2018-11-05T16:07:47.718Z,1541434067.718 [Default:CheckIn:Read_Iridium] Stopped
2018-11-05T16:07:47.718Z,1541434067.718 [Default:CheckIn:C.Wait] Running Loop=1
2018-11-05T16:07:47.718Z,1541434067.718 [Default:CheckIn:C.Wait](DEBUG): Initialize Wait Component.
2018-11-05T16:07:47.759Z,1541434067.759 [Reporter](INFO): platform_buoyancy_position 827.680866 cc
2018-11-05T16:07:48.119Z,1541434068.119 [Reporter](INFO): platform_buoyancy_position 833.187136 cc
2018-11-05T16:07:51.971Z,1541434071.971 [Reporter](INFO): platform_buoyancy_position 883.415341 cc
2018-11-05T16:07:52.132Z,1541434072.132 [Reporter](INFO): platform_buoyancy_position 885.564135 cc
2018-11-05T16:07:52.523Z,1541434072.523 [Reporter](INFO): platform_buoyancy_position 890.533265 cc
2018-11-05T16:07:52.883Z,1541434072.883 [Reporter](INFO): platform_buoyancy_position 895.502337 cc
2018-11-05T16:07:53.287Z,1541434073.287 [Reporter](INFO): platform_buoyancy_position 900.740037 cc
2018-11-05T16:07:53.675Z,1541434073.675 [Reporter](INFO): platform_buoyancy_position 906.246365 cc
2018-11-05T16:07:54.087Z,1541434074.087 [Reporter](INFO): platform_buoyancy_position 911.349722 cc
2018-11-05T16:07:54.483Z,1541434074.483 [Reporter](INFO): platform_buoyancy_position 915.781653 cc
2018-11-05T16:07:54.875Z,1541434074.875 [Reporter](INFO): platform_buoyancy_position 922.228035 cc
2018-11-05T16:07:55.294Z,1541434075.294 [Reporter](INFO): platform_buoyancy_position 926.659908 cc
2018-11-05T16:07:55.663Z,1541434075.663 [Reporter](INFO): platform_buoyancy_position 932.972063 cc
2018-11-05T16:07:56.075Z,1541434076.075 [Reporter](INFO): platform_buoyancy_position 937.403936 cc
2018-11-05T16:07:56.476Z,1541434076.476 [Reporter](INFO): platform_buoyancy_position 943.581806 cc
2018-11-05T16:07:56.924Z,1541434076.924 [Reporter](INFO): platform_buoyancy_position 947.879395 cc
2018-11-05T16:08:05.990Z,1541434085.990 [NAL9602](INFO): Powering down
2018-11-05T16:12:48.188Z,1541434368.188 [Default:CheckIn:C.Wait](INFO): Done Waiting.
2018-11-05T16:12:48.188Z,1541434368.188 [Default:CheckIn:C.Wait] Stopped
2018-11-05T16:12:48.188Z,1541434368.188 [Default:CheckIn:C.Wait](DEBUG): Uninitialize Wait Component.
2018-11-05T16:12:48.188Z,1541434368.188 [Default:CheckIn:D] Running Loop=1
2018-11-05T16:12:48.582Z,1541434368.582 [Default:CheckIn:D] Stopped
2018-11-05T16:12:48.582Z,1541434368.582 [Default:CheckIn:E] Running Loop=1
2018-11-05T16:12:51.700Z,1541434371.700 [Default:CheckIn:E](IMPORTANT): Default mission has been running for 9.516898 min 
2018-11-05T16:12:51.734Z,1541434371.734 [Default:CheckIn:E] Stopped
2018-11-05T16:12:51.734Z,1541434371.734 [Default:CheckIn](INFO): Completed Default:CheckIn
2018-11-05T16:12:51.734Z,1541434371.734 [Default:CheckIn] Stopped
2018-11-05T16:12:51.734Z,1541434371.734 [Default:CheckIn](DEBUG): Aggregate::uninitialize Default:CheckIn
2018-11-05T16:12:51.735Z,1541434371.735 [Default:CheckIn](INFO): Running loop #2
2018-11-05T16:12:51.735Z,1541434371.735 [Default:CheckIn] Running Loop=2
2018-11-05T16:12:51.735Z,1541434371.735 [Default:CheckIn](DEBUG): Aggregate::initialize Default:CheckIn
2018-11-05T16:12:51.735Z,1541434371.735 [Default:CheckIn:Read_GPS] Running Loop=1
2018-11-05T16:12:52.182Z,1541434372.182 [NAL9602](INFO): Powering up
2018-11-05T16:13:03.382Z,1541434383.382 [NAL9602](INFO): NAL9602 initialized
2018-11-05T16:17:52.017Z,1541434672.017 [Default:CheckIn:Read_GPS](INFO): Timed out from 2018-11-05T16:12:51.7Z
2018-11-05T16:17:52.018Z,1541434672.018 [Default:CheckIn:Read_GPS] Stopped
2018-11-05T16:17:52.018Z,1541434672.018 [Default:CheckIn:Read_Iridium] Running Loop=1
2018-11-05T16:17:56.937Z,1541434676.937 [DataOverHttps](INFO): Sending 25 bytes from file Logs/20181105T160011/Courier0007.lzma
2018-11-05T16:17:57.703Z,1541434677.703 [DataOverHttps](INFO): Moved sent file to Logs/20181105T160011/Courier0007.lzma.bak
2018-11-05T16:17:57.703Z,1541434677.703 [DataOverHttps](INFO): SBD MOMSN=8791921
2018-11-05T16:18:06.508Z,1541434686.508 [NAL9602](FAULT): MT Queue status failed to be acquired within timeout. Will not retry this session.
2018-11-05T16:18:06.613Z,1541434686.613 [DataOverHttps](INFO): Sending 151 bytes from file Logs/20181105T160011/Express0008.lzma
2018-11-05T16:18:07.375Z,1541434687.375 [DataOverHttps](INFO): Moved sent file to Logs/20181105T160011/Express0008.lzma.bak
2018-11-05T16:18:07.375Z,1541434687.375 [DataOverHttps](INFO): SBD MOMSN=8791923
2018-11-05T16:18:07.912Z,1541434687.912 [Default:CheckIn:Read_Iridium] Stopped
2018-11-05T16:18:07.912Z,1541434687.912 [Default:CheckIn:C.Wait] Running Loop=1
2018-11-05T16:18:07.912Z,1541434687.912 [Default:CheckIn:C.Wait](DEBUG): Initialize Wait Component.
2018-11-05T16:18:37.010Z,1541434717.010 [NAL9602](INFO): Powering down
2018-11-05T16:23:08.278Z,1541434988.278 [Default:CheckIn:C.Wait](INFO): Done Waiting.
2018-11-05T16:23:08.279Z,1541434988.279 [Default:CheckIn:C.Wait] Stopped
2018-11-05T16:23:08.279Z,1541434988.279 [Default:CheckIn:C.Wait](DEBUG): Uninitialize Wait Component.
2018-11-05T16:23:08.279Z,1541434988.279 [Default:CheckIn:D] Running Loop=1
2018-11-05T16:23:08.686Z,1541434988.686 [Default:CheckIn:D] Stopped
2018-11-05T16:23:08.686Z,1541434988.686 [Default:CheckIn:E] Running Loop=1
2018-11-05T16:23:09.081Z,1541434989.081 [Default:CheckIn:E](IMPORTANT): Default mission has been running for 19.852002 min 
2018-11-05T16:23:09.082Z,1541434989.082 [Default:CheckIn:E] Stopped
2018-11-05T16:23:09.082Z,1541434989.082 [Default:CheckIn](INFO): Completed Default:CheckIn
2018-11-05T16:23:09.082Z,1541434989.082 [Default:CheckIn] Stopped
2018-11-05T16:23:09.082Z,1541434989.082 [Default:CheckIn](DEBUG): Aggregate::uninitialize Default:CheckIn
2018-11-05T16:23:09.082Z,1541434989.082 [Default:CheckIn](INFO): Running loop #3
2018-11-05T16:23:09.082Z,1541434989.082 [Default:CheckIn] Running Loop=3
2018-11-05T16:23:09.082Z,1541434989.082 [Default:CheckIn](DEBUG): Aggregate::initialize Default:CheckIn
2018-11-05T16:23:09.083Z,1541434989.083 [Default:CheckIn:Read_GPS] Running Loop=1
2018-11-05T16:23:12.338Z,1541434992.338 [NAL9602](INFO): Powering up
2018-11-05T16:23:23.515Z,1541435003.515 [NAL9602](INFO): NAL9602 initialized
2018-11-05T16:23:24.314Z,1541435004.314 [NAL9602](FAULT): GPS failed to acquire within timeout.
2018-11-05T16:23:24.314Z,1541435004.314 [NAL9602] Data Fault, FailCount= 1
2018-11-05T16:23:24.314Z,1541435004.314 [NAL9602](ERROR): Data Fault
2018-11-05T16:23:24.398Z,1541435004.398 [CBIT](ERROR): Data Fault in component: NAL9602
2018-11-05T16:23:24.714Z,1541435004.714 [NAL9602](INFO): Powering down
2018-11-05T16:23:25.591Z,1541435005.591 [CBIT](INFO): Clearing failed state for component NAL9602
2018-11-05T16:23:25.591Z,1541435005.591 [NAL9602] No Fault, FailCount= 1
2018-11-05T16:23:54.722Z,1541435034.722 [NAL9602](INFO): Powering up NAL9602
2018-11-05T16:24:05.915Z,1541435045.915 [NAL9602](INFO): NAL9602 initialized
2018-11-05T16:28:09.111Z,1541435289.111 [Default:CheckIn:Read_GPS](INFO): Timed out from 2018-11-05T16:23:09.1Z
2018-11-05T16:28:09.111Z,1541435289.111 [Default:CheckIn:Read_GPS] Stopped
2018-11-05T16:28:09.111Z,1541435289.111 [Default:CheckIn:Read_Iridium] Running Loop=1
2018-11-05T16:28:13.489Z,1541435293.489 [DataOverHttps](INFO): Sending 25 bytes from file Logs/20181105T160011/Courier0010.lzma
2018-11-05T16:28:14.287Z,1541435294.287 [DataOverHttps](INFO): Moved sent file to Logs/20181105T160011/Courier0010.lzma.bak
2018-11-05T16:28:14.287Z,1541435294.287 [DataOverHttps](INFO): SBD MOMSN=8791926
2018-11-05T16:28:24.178Z,1541435304.178 [DataOverHttps](INFO): Sending 214 bytes from file Logs/20181105T160011/Express0011.lzma
2018-11-05T16:28:24.975Z,1541435304.975 [DataOverHttps](INFO): Moved sent file to Logs/20181105T160011/Express0011.lzma.bak
2018-11-05T16:28:24.975Z,1541435304.975 [DataOverHttps](INFO): SBD MOMSN=8791928
2018-11-05T16:28:25.500Z,1541435305.500 [Default:CheckIn:Read_Iridium] Stopped
2018-11-05T16:28:25.500Z,1541435305.500 [Default:CheckIn:C.Wait] Running Loop=1
2018-11-05T16:28:25.500Z,1541435305.500 [Default:CheckIn:C.Wait](DEBUG): Initialize Wait Component.
2018-11-05T16:29:09.002Z,1541435349.002 [NAL9602](FAULT): MT Queue status failed to be acquired within timeout. Will not retry this session.
2018-11-05T16:29:39.422Z,1541435379.422 [NAL9602](INFO): Powering down
2018-11-05T16:33:25.997Z,1541435605.997 [Default:CheckIn:C.Wait](INFO): Done Waiting.
2018-11-05T16:33:25.997Z,1541435605.997 [Default:CheckIn:C.Wait] Stopped
2018-11-05T16:33:25.997Z,1541435605.997 [Default:CheckIn:C.Wait](DEBUG): Uninitialize Wait Component.
2018-11-05T16:33:25.997Z,1541435605.997 [Default:CheckIn:D] Running Loop=1
2018-11-05T16:33:26.402Z,1541435606.402 [Default:CheckIn:D] Stopped
2018-11-05T16:33:26.402Z,1541435606.402 [Default:CheckIn:E] Running Loop=1
2018-11-05T16:33:29.644Z,1541435609.644 [Default:CheckIn:E](IMPORTANT): Default mission has been running for 30.147266 min 
2018-11-05T16:33:29.644Z,1541435609.644 [Default:CheckIn:E] Stopped
2018-11-05T16:33:29.645Z,1541435609.645 [Default:CheckIn](INFO): Completed Default:CheckIn
2018-11-05T16:33:29.645Z,1541435609.645 [Default:CheckIn] Stopped
2018-11-05T16:33:29.645Z,1541435609.645 [Default:CheckIn](DEBUG): Aggregate::uninitialize Default:CheckIn
2018-11-05T16:33:29.645Z,1541435609.645 [Default:CheckIn](INFO): Running loop #4
2018-11-05T16:33:29.645Z,1541435609.645 [Default:CheckIn] Running Loop=4
2018-11-05T16:33:29.645Z,1541435609.645 [Default:CheckIn](DEBUG): Aggregate::initialize Default:CheckIn
2018-11-05T16:33:29.645Z,1541435609.645 [Default:CheckIn:Read_GPS] Running Loop=1
2018-11-05T16:33:30.130Z,1541435610.130 [NAL9602](INFO): Powering up
2018-11-05T16:33:41.326Z,1541435621.326 [NAL9602](INFO): NAL9602 initialized
2018-11-05T16:34:04.523Z,1541435644.523 [NAL9602](INFO): SBD MO Status=2, MOMSN=10424, MT Status=2, MTMSN=0
2018-11-05T16:34:04.524Z,1541435644.524 [NAL9602](ERROR): Failed to initiate SBD session. Error code: 2
2018-11-05T16:37:34.580Z,1541435854.580 [NAL9602](INFO): SBD MO Status=2, MOMSN=10424, MT Status=2, MTMSN=0
2018-11-05T16:37:34.580Z,1541435854.580 [NAL9602](ERROR): Failed to initiate SBD session. Error code: 2
2018-11-05T16:38:16.546Z,1541435896.546 [CommandLine](IMPORTANT): got command run ./Missions/Insert/Science.xml
2018-11-05T16:38:16.546Z,1541435896.546 [MissionManager](INFO): Loading Mission: ./Missions/Insert/Science.xml
2018-11-05T16:38:16.870Z,1541435896.870 [MissionManager](INFO): DefineArg Science.SampleISUS = 0 bool
2018-11-05T16:38:16.873Z,1541435896.873 [MissionManager](INFO): DefineArg Science.SampleISUSmaxPitch = 60.000000 arcdeg
2018-11-05T16:38:16.876Z,1541435896.876 [MissionManager](INFO): DefineArg Science.SampleISUSminPitch = -60.000000 arcdeg
2018-11-05T16:38:16.879Z,1541435896.879 [MissionManager](INFO): DefineArg Science.PeakDetectChlActive = 0 bool
2018-11-05T16:38:16.882Z,1541435896.882 [MissionManager](INFO): DefineArg Science.TimeWindowPeakReport = nan min
2018-11-05T16:38:16.885Z,1541435896.885 [MissionManager](INFO): DefineArg Science.HighestChlPeakReportActive = 0 bool
2018-11-05T16:38:16.888Z,1541435896.888 [MissionManager](INFO): DefineArg Science.PatchTracking = 0 bool
2018-11-05T16:38:16.891Z,1541435896.891 [MissionManager](INFO): DefineArg Science.FilterWidthHorizontal = 3.000000 count
2018-11-05T16:38:16.894Z,1541435896.894 [MissionManager](INFO): DefineArg Science.NumProfilesSlidingwindow = 100.000000 count
2018-11-05T16:38:16.897Z,1541435896.897 [MissionManager](INFO): DefineArg Science.OffPeakFractionHorizontal = 80.000000 %
2018-11-05T16:38:16.900Z,1541435896.900 [MissionManager](INFO): DefineArg Science.PeakDetectNO3Active = 0 bool
2018-11-05T16:38:16.929Z,1541435896.929 [MissionManager](INFO): DefineArg Science.PeakDetectOilActive = 0 bool
2018-11-05T16:38:16.932Z,1541435896.932 [MissionManager](INFO): DefineArg Science.PeakDetectFDOMActive = 0 bool
2018-11-05T16:38:16.948Z,1541435896.948 [MissionManager](INFO): DefineArg Science.UpwardDerivativeOfTemperatureActive = 0 bool
2018-11-05T16:38:16.952Z,1541435896.952 [MissionManager](INFO): DefineArg Science.EnabledAanderaaO2 = 1.000000 bool
2018-11-05T16:38:17.010Z,1541435897.010 [MissionManager](INFO): DefineArg Science.EnabledNeilBrown = 1.000000 bool
2018-11-05T16:38:17.026Z,1541435897.026 [MissionManager](INFO): DefineArg Science.EnabledSeabird = 1.000000 bool
2018-11-05T16:38:17.034Z,1541435897.034 [MissionManager](INFO): DefineArg Science.EnabledTurbulence_NPS = 0.000000 bool
2018-11-05T16:38:17.042Z,1541435897.042 [MissionManager](INFO): DefineArg Science.EnabledWetLabsBB2FL = 1.000000 bool
2018-11-05T16:38:17.071Z,1541435897.071 [MissionManager](INFO): DefineArg Science.EnabledWetLabsSeaOWL_UV_A = 0.000000 bool
2018-11-05T16:38:17.080Z,1541435897.080 [MissionManager](INFO): DefineArg Science.EnabledWetLabsUBAT = 0.000000 bool
2018-11-05T16:38:17.100Z,1541435897.100 [MissionManager](INFO): DefineArg Science.EnabledISUS = 0.000000 bool
2018-11-05T16:38:17.108Z,1541435897.108 [MissionManager](INFO): DefineArg Science.LowPassWindowLength = 20.000000 count
2018-11-05T16:38:17.115Z,1541435897.115 [MissionManager](INFO): DefineArg Science.PeakChlShallowBound = nan m
2018-11-05T16:38:17.128Z,1541435897.128 [MissionManager](INFO): DefineArg Science.PeakChlDeepBound = nan m
2018-11-05T16:38:17.139Z,1541435897.139 [MissionManager](INFO): DefineArg Science.PeakShallowBound = nan m
2018-11-05T16:38:17.143Z,1541435897.143 [MissionManager](INFO): DefineArg Science.PeakDeepBound = nan m
2018-11-05T16:38:17.163Z,1541435897.163 [MissionManager](INFO): DefineOutput Science.PeakChl = 0.000000 ug/l
2018-11-05T16:38:17.168Z,1541435897.168 [MissionManager](INFO): DefineOutput Science.PeakChlDepth = 0.000000 m
2018-11-05T16:38:17.195Z,1541435897.195 [MissionManager](INFO): DefineOutput Science.PeakChlTemperature = 0.000000 degC
2018-11-05T16:38:17.199Z,1541435897.199 [MissionManager](INFO): DefineOutput Science.PeakChlLatitude = nan arcdeg
2018-11-05T16:38:17.219Z,1541435897.219 [MissionManager](INFO): DefineOutput Science.PeakChlLongitude = nan arcdeg
2018-11-05T16:38:17.222Z,1541435897.222 [MissionManager](INFO): DefineOutput Science.PeakNO3 = 0.000000 umol/l
2018-11-05T16:38:17.245Z,1541435897.245 [MissionManager](INFO): DefineOutput Science.PeakNO3Depth = 0.000000 m
2018-11-05T16:38:17.248Z,1541435897.248 [MissionManager](INFO): DefineOutput Science.PeakNO3Latitude = nan arcdeg
2018-11-05T16:38:17.252Z,1541435897.252 [MissionManager](INFO): DefineOutput Science.PeakNO3Longitude = nan arcdeg
2018-11-05T16:38:17.259Z,1541435897.259 [MissionManager](INFO): DefineOutput Science.PatchChl = 0.000000 m
2018-11-05T16:38:17.263Z,1541435897.263 [MissionManager](INFO): DefineOutput Science.PatchChlDepth = 0.000000 m
2018-11-05T16:38:17.283Z,1541435897.283 [MissionManager](INFO): DefineOutput Science.PatchChlLatitude = nan arcdeg
2018-11-05T16:38:17.286Z,1541435897.286 [MissionManager](INFO): DefineOutput Science.PatchChlLongitude = nan arcdeg
2018-11-05T16:38:17.309Z,1541435897.309 [MissionManager](INFO): DefineOutput Science.PatchChlDistance = nan m
2018-11-05T16:38:17.312Z,1541435897.312 [MissionManager](INFO): DefineOutput Science.PeakOil = 0.000000 kg/m3
2018-11-05T16:38:17.320Z,1541435897.320 [MissionManager](INFO): DefineOutput Science.PeakOilDepth = 0.000000 m
2018-11-05T16:38:17.327Z,1541435897.327 [MissionManager](INFO): DefineOutput Science.PeakOilLatitude = nan arcdeg
2018-11-05T16:38:17.332Z,1541435897.332 [MissionManager](INFO): DefineOutput Science.PeakOilLongitude = nan arcdeg
2018-11-05T16:38:17.351Z,1541435897.351 [MissionManager](INFO): DefineOutput Science.PeakFDOM = 0.000000 ppb
2018-11-05T16:38:17.358Z,1541435897.358 [MissionManager](INFO): DefineOutput Science.PeakFDOMDepth = 0.000000 m
2018-11-05T16:38:17.363Z,1541435897.363 [MissionManager](INFO): DefineOutput Science.PeakFDOMLatitude = nan arcdeg
2018-11-05T16:38:17.406Z,1541435897.406 [MissionManager](INFO): DefineOutput Science.PeakFDOMLongitude = nan arcdeg
2018-11-05T16:38:17.426Z,1541435897.426 [MissionManager](INFO): DefineOutput Science.PatchFDOMDistance = nan m
2018-11-05T16:38:17.484Z,1541435897.484 [Science:PeakDetectChl:A.PeakDetectVsDepth](DEBUG): Construct PeakDetectVsDepth.
2018-11-05T16:38:17.508Z,1541435897.508 [Science:HighestChlPeakReport:A.PeakDetectHorizontal](DEBUG): Construct PeakDetectHorizontal.
2018-11-05T16:38:17.530Z,1541435897.530 [Science:PeakDetectNO3:A.PeakDetectVsDepth](DEBUG): Construct PeakDetectVsDepth.
2018-11-05T16:38:17.544Z,1541435897.544 [Science:PeakDetectOil:A.PeakDetectVsDepth](DEBUG): Construct PeakDetectVsDepth.
2018-11-05T16:38:17.587Z,1541435897.587 [Science:PeakDetectFDOM:A.PeakDetectVsDepth](DEBUG): Construct PeakDetectVsDepth.
2018-11-05T16:38:17.645Z,1541435897.645 [MissionManager](DEBUG): 
<?xml version="1.0" encoding="UTF-8"?>
<!-- ====================
     Generated by TethysL
     ==================== -->
<Aggregate xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
           xmlns="Tethys"
           xmlns:Units="Tethys/Units"
           xmlns:Science="Tethys/Science"
           xmlns:Universal="Tethys/Universal"
           xmlns:Trigger="Tethys/Trigger"
           xsi:schemaLocation="Tethys http://okeanids.mbari.org/tethys/Xml/Tethys.xsd
                               Tethys/Units http://okeanids.mbari.org/tethys/Xml/Units.xsd
                               Tethys/Science http://okeanids.mbari.org/tethys/Xml/Science.xsd
                               Tethys/Universal http://okeanids.mbari.org/tethys/Xml/Universal.xsd
                               Tethys/Trigger http://okeanids.mbari.org/tethys/Xml/Trigger.xsd"
       Id="Science">

    <DefineArg Name="SampleISUS"><Description>
        Set either this or PeakDetectNO3Active to True in order to sample
        Nitrate. EnabledISUS must also be true.
    </Description><False/></DefineArg>

    <DefineArg Name="SampleISUSmaxPitch"><Description>
        Maximum pitch to sample ISUS. (EnabledISUS must also be true.)
    </Description><Units:degree/><Value>60.0</Value></DefineArg>

    <DefineArg Name="SampleISUSminPitch"><Description>
        Minimum pitch to sample ISUS. (EnabledISUS must also be true.)
    </Description><Units:degree/><Value>-60.0</Value></DefineArg>

    <DefineArg Name="PeakDetectChlActive"><Description>
        Turns on peak detection of Cholorphyll.
    </Description><False/></DefineArg>

    <DefineArg Name="TimeWindowPeakReport"><Description>
        If greater than zero, report a peak every window. If NaN or zero, this
        variable is ignored.
    </Description><Units:minute/><Value>NaN</Value></DefineArg>

    <DefineArg Name="HighestChlPeakReportActive"><Description>
        Turns on reporting of the highest peak value on yo-yo profiles in a
        horizontal sliding window (of length numProfilesSlidingwindow)
    </Description><False/></DefineArg>

    <DefineArg Name="PatchTracking"><Description>
        If tracking a patch
    </Description><False/></DefineArg>

<!--debug
    </Description><True/></DefineArg>
-->

    <DefineArg Name="FilterWidthHorizontal"><Description>
        Width of boxcar filter applied to yoyo-wise chl peaks to pick out the
        highest peak.
    </Description><Units:count/><Value>3</Value></DefineArg>

    <DefineArg Name="NumProfilesSlidingwindow"><Description>
        Length of horizontal sliding window. The highest yoyo-wise chl peak
        (after low-pass filtering by a filter of length FilterWidthHorizontal)
        within this window.
    </Description><Units:count/><Value>100</Value></DefineArg>

    <DefineArg Name="OffPeakFractionHorizontal"><Description>
        When filtered horizontal value is this fraction of the peak, consider it
        outside the patch.
    </Description><Units:percent/><Value>80</Value></DefineArg>

    <DefineArg Name="PeakDetectNO3Active"><Description>
        Turns on peak detection of Nitrate (and turns on ISUS).
    </Description><False/></DefineArg>

    <DefineArg Name="PeakDetectOilActive"><Description>
        Turns on peak detection of Dissolved Oil.
    </Description><False/></DefineArg>

    <DefineArg Name="PeakDetectFDOMActive"><Description>
        Turns on peak detection of concentration_of_colored_dissolved_organic_matter_in_sea_water_expressed_as_equivalent_mass_fraction_of_quinine_sulfate_dihydrate from FDOM sensor.
    </Description><False/></DefineArg>
    
    <DefineArg Name="UpwardDerivativeOfTemperatureActive"><Description>
        Turns on seawater temperature derivative.
    </Description><False/></DefineArg>

    <DefineArg Name="EnabledAanderaaO2"><Description>
        Automatically set to True if the Aanderaa O2 sensor is installed. Set to
        false to disable reading Aandera O2.
    </Description><Science:Aanderaa_O2.loadAtStartup/></DefineArg>

    <DefineArg Name="EnabledNeilBrown"><Description>
        Automatically set to true if the Neil Brown CTD is enabled. Set to false
        to disable reading from the Neil Brown.
    </Description><Science:CTD_NeilBrown.loadAtStartup/></DefineArg>

    <DefineArg Name="EnabledSeabird"><Description>
        Automatically set to true if the CTD is enabled. Set to false to disable
        reading from the CTD.
    </Description><Science:CTD_Seabird.loadAtStartup/></DefineArg>

    <DefineArg Name="EnabledTurbulence_NPS"><Description>
        Automatically set to true if the NPS Turbulence sensor is enabled. Set
        to false to disable reading from the NPS Turbulence sensor.
    </Description><Science:Turbulence_NPS.loadAtStartup/></DefineArg>

    <DefineArg Name="EnabledWetLabsBB2FL"><Description>
        Automatically set to true if the the WetLabs BB2FL is enabled. Set to
        false to disable the WetLabs BB2FL.
    </Description><Science:WetLabsBB2FL.loadAtStartup/></DefineArg>

    <DefineArg Name="EnabledWetLabsSeaOWL_UV_A"><Description>
        Automatically set to true if the the WetLabs SeaOWL UV-A is enabled. Set
        to false to disable the WetLabs SeaOWL UV-A.
    </Description><Science:WetLabsSeaOWL_UV_A.loadAtStartup/></DefineArg>

    <DefineArg Name="EnabledWetLabsUBAT"><Description>
        Automatically set to true if the the WetLabs UBAT is enabled. Set
        to false to disable the WetLabs UBAT.
    </Description><Science:WetLabsUBAT.loadAtStartup/></DefineArg>    

    <DefineArg Name="EnabledISUS"><Description>
        Automatically set to True if ISUS is enabled. Set to false to disable
        ISUS.
    </Description><Science:ISUS.loadAtStartup/></DefineArg>

    <DefineArg Name="LowPassWindowLength"><Description>
        Low-pass window length (based on depth sensor sampling interval 0.4
        second) for low-pass filtering.
    </Description><Units:count/><Value>20</Value></DefineArg>

    <DefineArg Name="PeakChlShallowBound"><Description>
        Shallow depth bound for detecting chl peak on each descent or ascent
        profile.
    </Description><Units:meter/><Value>NaN</Value></DefineArg>

<!--debug
    </Description><Units:meter/><Value>10</Value></DefineArg>
-->

    <DefineArg Name="PeakChlDeepBound"><Description>
        Deep depth bound for detecting chl peak on each descent or ascent
        profile.
    </Description><Units:meter/><Value>NaN</Value></DefineArg>

<!--debug
    </Description><Units:meter/><Value>20</Value></DefineArg>
-->

    <DefineArg Name="PeakShallowBound"><Description>
        Shallow depth bound for detecting any peak on each descent or ascent
        profile.
    </Description><Units:meter/><Value>NaN</Value></DefineArg>

    <DefineArg Name="PeakDeepBound"><Description>
        Deep depth bound for detecting any peak on each descent or ascent
        profile.
    </Description><Units:meter/><Value>NaN</Value></DefineArg>

    <DefineOutput Name="PeakChl"><Units:microgram_per_liter/><Value>0</Value></DefineOutput>

    <DefineOutput Name="PeakChlDepth"><Units:meter/><Value>0</Value></DefineOutput>

    <DefineOutput Name="PeakChlTemperature"><Units:celsius/><Value>0</Value></DefineOutput>

    <DefineOutput Name="PeakChlLatitude"><Units:degree/><Value>NaN</Value></DefineOutput>

    <DefineOutput Name="PeakChlLongitude"><Units:degree/><Value>NaN</Value></DefineOutput>

    <DefineOutput Name="PeakNO3"><Units:micromole_per_liter/><Value>0</Value></DefineOutput>

    <DefineOutput Name="PeakNO3Depth"><Units:meter/><Value>0</Value></DefineOutput>

    <DefineOutput Name="PeakNO3Latitude"><Units:degree/><Value>NaN</Value></DefineOutput>

    <DefineOutput Name="PeakNO3Longitude"><Units:degree/><Value>NaN</Value></DefineOutput>

    <DefineOutput Name="PatchChl"><Units:meter/><Value>0</Value></DefineOutput>

    <DefineOutput Name="PatchChlDepth"><Units:meter/><Value>0</Value></DefineOutput>

    <DefineOutput Name="PatchChlLatitude"><Units:degree/><Value>NaN</Value></DefineOutput>

    <DefineOutput Name="PatchChlLongitude"><Units:degree/><Value>NaN</Value></DefineOutput>

    <DefineOutput Name="PatchChlDistance"><Units:meter/><Value>NaN</Value></DefineOutput>

    <DefineOutput Name="PeakOil"><Units:kilogram_per_cubic_meter/><Value>0</Value></DefineOutput>

    <DefineOutput Name="PeakOilDepth"><Units:meter/><Value>0</Value></DefineOutput>

    <DefineOutput Name="PeakOilLatitude"><Units:degree/><Value>NaN</Value></DefineOutput>

    <DefineOutput Name="PeakOilLongitude"><Units:degree/><Value>NaN</Value></DefineOutput>

    <DefineOutput Name="PeakFDOM"><Units:part_per_billion/><Value>0</Value></DefineOutput>

    <DefineOutput Name="PeakFDOMDepth"><Units:meter/><Value>0</Value></DefineOutput>

    <DefineOutput Name="PeakFDOMLatitude"><Units:degree/><Value>NaN</Value></DefineOutput>

    <DefineOutput Name="PeakFDOMLongitude"><Units:degree/><Value>NaN</Value></DefineOutput>
    
    <DefineOutput Name="PatchFDOMDistance"><Units:meter/><Value>NaN</Value></DefineOutput>    
    
    <Parallel/>

    <ReadData Strategy="MinError">
        <While>
            <Arg Name="EnabledAanderaaO2"/>
        </While>
        <Universal:mass_concentration_of_oxygen_in_sea_water/>
    </ReadData>

    <ReadData>
        <While>
            <Arg Name="EnabledISUS"/>
            <And><Universal:platform_pitch_angle/><Lt><Arg Name="SampleISUSmaxPitch"/></Lt><And><Universal:platform_pitch_angle/><Gt><Arg Name="SampleISUSminPitch"/></Gt><And><Arg Name="SampleISUS"/><Or><Arg Name="PeakDetectNO3Active"/></Or></And></And></And>
        </While>
        <Universal:mole_concentration_of_nitrate_in_sea_water/>
    </ReadData>

    <ReadData Strategy="MinError">
        <While>
            <Arg Name="EnabledNeilBrown"/>
            <Or><Arg Name="EnabledSeabird"/></Or>
        </While>
        <Universal:sea_water_temperature/>
        <Universal:sea_water_salinity/>
    </ReadData>

    <ReadData Strategy="MinError">
        <While>
            <Arg Name="EnabledSeabird"/>
        </While>
        <Science:CTD_Seabird.sea_water_temperature/>
        <Science:CTD_Seabird.sea_water_salinity/>
    </ReadData>

    <ReadData Strategy="MinError">
        <While>
            <Arg Name="EnabledNeilBrown"/>
            <Or><Arg Name="EnabledSeabird"/></Or>
            <And><Arg Name="UpwardDerivativeOfTemperatureActive"/></And>
        </While>
        <Universal:upward_derivative_of_sea_water_temperature/>
    </ReadData>

    <ReadData Strategy="MinError">
        <While>
            <Arg Name="EnabledTurbulence_NPS"/>
        </While>
        <Science:Turbulence_NPS.MicroCond/>
    </ReadData>

    <ReadData Strategy="MinError">
        <While>
            <Arg Name="EnabledWetLabsBB2FL"/>
            <Or><Arg Name="PeakDetectChlActive"/></Or>
        </While>
        <Universal:mass_concentration_of_chlorophyll_in_sea_water/>
    </ReadData>

    <ReadData Strategy="MinError">
        <While>
            <Arg Name="EnabledWetLabsUBAT"/>
        </While>
        <Science:WetLabsUBAT.biolum_potential/>
    </ReadData>

<!--debug-->

    <ReadData Id="Read_Oil" Strategy="MinError">
        <While>
            <Arg Name="EnabledWetLabsSeaOWL_UV_A"/>
            <Or><Arg Name="PeakDetectOilActive"/></Or>
        </While>
        <Universal:mass_concentration_of_chlorophyll_in_sea_water/>
    </ReadData>

    <Aggregate Id="PeakDetectChl">

        <While>
            <Arg Name="PeakDetectChlActive"/>
        </While>

        <Trigger:PeakDetectVsDepth>
            <Sequence/>
            <Setting><Trigger:PeakDetectVsDepth.detect/><Universal:mass_concentration_of_chlorophyll_in_sea_water/></Setting>
            <Setting><Trigger:PeakDetectVsDepth.timeWindowPeakReport/><Arg Name="TimeWindowPeakReport"/></Setting>
            <Setting><Trigger:PeakDetectVsDepth.windowLength/><Arg Name="LowPassWindowLength"/></Setting>
            <Setting><Trigger:PeakDetectVsDepth.shallowBound/><Arg Name="PeakChlShallowBound"/></Setting>
            <Setting><Trigger:PeakDetectVsDepth.deepBound/><Arg Name="PeakChlDeepBound"/></Setting>
            <OutputArg Name="PeakChl"><Trigger:PeakDetectVsDepth.peakDetect/></OutputArg>
            <OutputArg Name="PeakChlDepth"><Trigger:PeakDetectVsDepth.peakDepth/></OutputArg>
            <OutputArg Name="PeakChlTemperature"><Trigger:PeakDetectVsDepth.peakTemperature/></OutputArg>
            <OutputArg Name="PeakChlLatitude"><Trigger:PeakDetectVsDepth.peakLatitude/></OutputArg>
            <OutputArg Name="PeakChlLongitude"><Trigger:PeakDetectVsDepth.peakLongitude/></OutputArg>
        </Trigger:PeakDetectVsDepth>

<!--debug
        <Syslog Severity="Important">PeakChl, PeakChlLatitude, PeakChlLongitude = <Arg Name="PeakChl"/><Units:microgram_per_liter/>, <Arg Name="PeakChlLatitude"/><Units:degree/>, <Arg Name="PeakChlLongitude"/><Units:degree/></Syslog>
-->

        <SendData Service="Express"><Arg Name="PeakChl"/><Arg Name="PeakChlDepth"/>
        </SendData>

    </Aggregate>

    <Aggregate Id="HighestChlPeakReport">

        <While>
            <Arg Name="HighestChlPeakReportActive"/>
        </While>

        <Trigger:PeakDetectHorizontal>
            <Sequence/>
            <Setting><Trigger:PeakDetectHorizontal.detectFrom/><Arg Name="PeakChl"/></Setting>
            <Setting><Trigger:PeakDetectHorizontal.depthFrom/><Arg Name="PeakChlDepth"/></Setting>
            <Setting><Trigger:PeakDetectHorizontal.latitudeFrom/><Arg Name="PeakChlLatitude"/></Setting>
            <Setting><Trigger:PeakDetectHorizontal.longitudeFrom/><Arg Name="PeakChlLongitude"/></Setting>
            <Setting><Trigger:PeakDetectHorizontal.patchTracking/><Arg Name="PatchTracking"/></Setting>
            <Setting><Trigger:PeakDetectHorizontal.filterWidth/><Arg Name="FilterWidthHorizontal"/></Setting>
            <Setting><Trigger:PeakDetectHorizontal.numProfilesSlidingwindow/><Arg Name="NumProfilesSlidingwindow"/></Setting>
            <Setting><Trigger:PeakDetectHorizontal.offPeakFraction/><Arg Name="OffPeakFractionHorizontal"/></Setting>
            <OutputArg Name="PatchChl"><Trigger:PeakDetectHorizontal.peakDetect/></OutputArg>
            <OutputArg Name="PatchChlDepth"><Trigger:PeakDetectHorizontal.peakDepth/></OutputArg>
            <OutputArg Name="PatchChlLatitude"><Trigger:PeakDetectHorizontal.peakLatitude/></OutputArg>
            <OutputArg Name="PatchChlLongitude"><Trigger:PeakDetectHorizontal.peakLongitude/></OutputArg>
            <OutputArg Name="PatchChlDistance"><Trigger:PeakDetectHorizontal.peakDistance/></OutputArg>
        </Trigger:PeakDetectHorizontal>

    </Aggregate>

    <Aggregate Id="PeakDetectNO3">

        <While>
            <Arg Name="PeakDetectNO3Active"/>
        </While>

        <Trigger:PeakDetectVsDepth>
            <Sequence/>
            <Setting><Trigger:PeakDetectVsDepth.detect/><Universal:mole_concentration_of_nitrate_in_sea_water/></Setting>
            <Setting><Trigger:PeakDetectVsDepth.timeWindowPeakReport/><Arg Name="TimeWindowPeakReport"/></Setting>
            <Setting><Trigger:PeakDetectVsDepth.windowLength/><Arg Name="LowPassWindowLength"/></Setting>
            <Setting><Trigger:PeakDetectVsDepth.shallowBound/><Arg Name="PeakShallowBound"/></Setting>
            <Setting><Trigger:PeakDetectVsDepth.deepBound/><Arg Name="PeakDeepBound"/></Setting>
            <OutputArg Name="PeakNO3"><Trigger:PeakDetectVsDepth.peakDetect/></OutputArg>
            <OutputArg Name="PeakNO3Depth"><Trigger:PeakDetectVsDepth.peakDepth/></OutputArg>
            <OutputArg Name="PeakNO3Latitude"><Trigger:PeakDetectVsDepth.peakLatitude/></OutputArg>
            <OutputArg Name="PeakNO3Longitude"><Trigger:PeakDetectVsDepth.peakLongitude/></OutputArg>
        </Trigger:PeakDetectVsDepth>

        <SendData Service="Express"><Arg Name="PeakNO3"/><Arg Name="PeakNO3Depth"/>
        </SendData>

    </Aggregate>

    <Aggregate Id="PeakDetectOil">

        <While>
            <Arg Name="PeakDetectOilActive"/>
        </While>

        <Trigger:PeakDetectVsDepth>
            <Sequence/>
            <Setting><Trigger:PeakDetectVsDepth.detect/><Universal:mass_concentration_of_petroleum_hydrocarbons_in_sea_water/></Setting>
            <Setting><Trigger:PeakDetectVsDepth.timeWindowPeakReport/><Arg Name="TimeWindowPeakReport"/></Setting>
            <Setting><Trigger:PeakDetectVsDepth.windowLength/><Arg Name="LowPassWindowLength"/></Setting>
            <Setting><Trigger:PeakDetectVsDepth.shallowBound/><Arg Name="PeakShallowBound"/></Setting>
            <Setting><Trigger:PeakDetectVsDepth.deepBound/><Arg Name="PeakDeepBound"/></Setting>
            <OutputArg Name="PeakOil"><Trigger:PeakDetectVsDepth.peakDetect/></OutputArg>
            <OutputArg Name="PeakOilDepth"><Trigger:PeakDetectVsDepth.peakDepth/></OutputArg>
            <OutputArg Name="PeakOilLatitude"><Trigger:PeakDetectVsDepth.peakLatitude/></OutputArg>
            <OutputArg Name="PeakOilLongitude"><Trigger:PeakDetectVsDepth.peakLongitude/></OutputArg>
        </Trigger:PeakDetectVsDepth>

        <SendData Service="Express"><Arg Name="PeakOil"/><Arg Name="PeakOilDepth"/>
        </SendData>

    </Aggregate>

    <Aggregate Id="PeakDetectFDOM">

        <While>
            <Arg Name="PeakDetectFDOMActive"/>
        </While>

        <Trigger:PeakDetectVsDepth>
            <Sequence/>
            <Setting><Trigger:PeakDetectVsDepth.detect/><Universal:concentration_of_colored_dissolved_organic_matter_in_sea_water_expressed_as_equivalent_mass_fraction_of_quinine_sulfate_dihydrate/></Setting>
            <Setting><Trigger:PeakDetectVsDepth.timeWindowPeakReport/><Arg Name="TimeWindowPeakReport"/></Setting>
            <Setting><Trigger:PeakDetectVsDepth.windowLength/><Arg Name="LowPassWindowLength"/></Setting>
            <Setting><Trigger:PeakDetectVsDepth.shallowBound/><Arg Name="PeakShallowBound"/></Setting>
            <Setting><Trigger:PeakDetectVsDepth.deepBound/><Arg Name="PeakDeepBound"/></Setting>
            <OutputArg Name="PeakFDOM"><Trigger:PeakDetectVsDepth.peakDetect/></OutputArg>
            <OutputArg Name="PeakFDOMDepth"><Trigger:PeakDetectVsDepth.peakDepth/></OutputArg>
            <OutputArg Name="PeakFDOMTemperature"><Trigger:PeakDetectVsDepth.peakTemperature/></OutputArg>
            <OutputArg Name="PeakFDOMLatitude"><Trigger:PeakDetectVsDepth.peakLatitude/></OutputArg>
            <OutputArg Name="PeakFDOMLongitude"><Trigger:PeakDetectVsDepth.peakLongitude/></OutputArg>
        </Trigger:PeakDetectVsDepth>

        <SendData Service="Express"><Arg Name="PeakFDOM"/><Arg Name="PeakFDOMDepth"/>
        </SendData>

    </Aggregate>

</Aggregate>


2018-11-05T16:38:17.648Z,1541435897.648 [CommandLine](IMPORTANT): Running ./Missions/Insert/Science.xml
2018-11-05T16:38:17.887Z,1541435897.887 [Default] Stopped
2018-11-05T16:38:17.887Z,1541435897.887 [Default](DEBUG): Aggregate::uninitialize Default
2018-11-05T16:38:17.887Z,1541435897.887 [Default:B.GoToSurface] Stopped
2018-11-05T16:38:17.887Z,1541435897.887 [Default:B.GoToSurface](DEBUG): Uninitialize GoToSurfaceComponent.
2018-11-05T16:38:17.887Z,1541435897.887 [Default:CheckIn] Stopped
2018-11-05T16:38:17.887Z,1541435897.887 [Default:CheckIn](DEBUG): Aggregate::uninitialize Default:CheckIn
2018-11-05T16:38:17.887Z,1541435897.887 [Default:CheckIn:Read_GPS] Stopped
2018-11-05T16:38:17.887Z,1541435897.887 [MissionManager](IMPORTANT): Started mission Science
2018-11-05T16:38:17.888Z,1541435897.888 [Science] Running Loop=1
2018-11-05T16:38:17.888Z,1541435897.888 [Science](DEBUG): Aggregate::initialize Science
2018-11-05T16:38:17.888Z,1541435897.888 [Science:A] Running Loop=1
2018-11-05T16:38:17.888Z,1541435897.888 [Science:B] Running Loop=1
2018-11-05T16:38:17.888Z,1541435897.888 [Science:C] Running Loop=1
2018-11-05T16:38:17.888Z,1541435897.888 [Science:D] Running Loop=1
2018-11-05T16:38:17.888Z,1541435897.888 [Science:E] Running Loop=1
2018-11-05T16:38:17.888Z,1541435897.888 [Science:F] Running Loop=1
2018-11-05T16:38:17.888Z,1541435897.888 [Science:G] Running Loop=1
2018-11-05T16:38:17.888Z,1541435897.888 [Science:H] Running Loop=1
2018-11-05T16:38:17.888Z,1541435897.888 [Science:Read_Oil] Running Loop=1
2018-11-05T16:38:17.889Z,1541435897.889 [Science:PeakDetectChl] Running Loop=1
2018-11-05T16:38:17.889Z,1541435897.889 [Science:PeakDetectChl](DEBUG): Aggregate::initialize Science:PeakDetectChl
2018-11-05T16:38:17.889Z,1541435897.889 [Science:PeakDetectChl:A.PeakDetectVsDepth] Running Loop=1
2018-11-05T16:38:17.889Z,1541435897.889 [Science:PeakDetectChl:A.PeakDetectVsDepth](DEBUG): Initialize.
2018-11-05T16:38:17.891Z,1541435897.891 [Science:HighestChlPeakReport] Running Loop=1
2018-11-05T16:38:17.891Z,1541435897.891 [Science:HighestChlPeakReport](DEBUG): Aggregate::initialize Science:HighestChlPeakReport
2018-11-05T16:38:17.891Z,1541435897.891 [Science:HighestChlPeakReport:A.PeakDetectHorizontal] Running Loop=1
2018-11-05T16:38:17.891Z,1541435897.891 [Science:HighestChlPeakReport:A.PeakDetectHorizontal](INFO): Initialize.
2018-11-05T16:38:17.892Z,1541435897.892 [Science:PeakDetectNO3] Running Loop=1
2018-11-05T16:38:17.892Z,1541435897.892 [Science:PeakDetectNO3](DEBUG): Aggregate::initialize Science:PeakDetectNO3
2018-11-05T16:38:17.892Z,1541435897.892 [Science:PeakDetectNO3:A.PeakDetectVsDepth] Running Loop=1
2018-11-05T16:38:17.892Z,1541435897.892 [Science:PeakDetectNO3:A.PeakDetectVsDepth](DEBUG): Initialize.
2018-11-05T16:38:17.894Z,1541435897.894 [Science:PeakDetectOil] Running Loop=1
2018-11-05T16:38:17.894Z,1541435897.894 [Science:PeakDetectOil](DEBUG): Aggregate::initialize Science:PeakDetectOil
2018-11-05T16:38:17.895Z,1541435897.895 [Science:PeakDetectOil:A.PeakDetectVsDepth] Running Loop=1
2018-11-05T16:38:17.895Z,1541435897.895 [Science:PeakDetectOil:A.PeakDetectVsDepth](DEBUG): Initialize.
2018-11-05T16:38:17.909Z,1541435897.909 [Science:PeakDetectFDOM] Running Loop=1
2018-11-05T16:38:17.909Z,1541435897.909 [Science:PeakDetectFDOM](DEBUG): Aggregate::initialize Science:PeakDetectFDOM
2018-11-05T16:38:17.909Z,1541435897.909 [Science:PeakDetectFDOM:A.PeakDetectVsDepth] Running Loop=1
2018-11-05T16:38:17.909Z,1541435897.909 [Science:PeakDetectFDOM:A.PeakDetectVsDepth](DEBUG): Initialize.
2018-11-05T16:38:17.912Z,1541435897.912 [Science:PeakDetectFDOM] Stopped
2018-11-05T16:38:17.912Z,1541435897.912 [Science:PeakDetectFDOM](DEBUG): Aggregate::uninitialize Science:PeakDetectFDOM
2018-11-05T16:38:17.912Z,1541435897.912 [Science:PeakDetectFDOM:A.PeakDetectVsDepth] Stopped
2018-11-05T16:38:17.912Z,1541435897.912 [Science:PeakDetectFDOM:A.PeakDetectVsDepth](DEBUG): Uninitialize.
2018-11-05T16:38:17.912Z,1541435897.912 [Science:PeakDetectOil] Stopped
2018-11-05T16:38:17.912Z,1541435897.912 [Science:PeakDetectOil](DEBUG): Aggregate::uninitialize Science:PeakDetectOil
2018-11-05T16:38:17.913Z,1541435897.913 [Science:PeakDetectOil:A.PeakDetectVsDepth] Stopped
2018-11-05T16:38:17.913Z,1541435897.913 [Science:PeakDetectOil:A.PeakDetectVsDepth](DEBUG): Uninitialize.
2018-11-05T16:38:17.913Z,1541435897.913 [Science:PeakDetectNO3] Stopped
2018-11-05T16:38:17.913Z,1541435897.913 [Science:PeakDetectNO3](DEBUG): Aggregate::uninitialize Science:PeakDetectNO3
2018-11-05T16:38:17.913Z,1541435897.913 [Science:PeakDetectNO3:A.PeakDetectVsDepth] Stopped
2018-11-05T16:38:17.913Z,1541435897.913 [Science:PeakDetectNO3:A.PeakDetectVsDepth](DEBUG): Uninitialize.
2018-11-05T16:38:17.913Z,1541435897.913 [Science:HighestChlPeakReport] Stopped
2018-11-05T16:38:17.913Z,1541435897.913 [Science:HighestChlPeakReport](DEBUG): Aggregate::uninitialize Science:HighestChlPeakReport
2018-11-05T16:38:17.913Z,1541435897.913 [Science:HighestChlPeakReport:A.PeakDetectHorizontal] Stopped
2018-11-05T16:38:17.913Z,1541435897.913 [Science:HighestChlPeakReport:A.PeakDetectHorizontal](DEBUG): Uninitialize.
2018-11-05T16:38:17.913Z,1541435897.913 [Science:PeakDetectChl] Stopped
2018-11-05T16:38:17.914Z,1541435897.914 [Science:PeakDetectChl](DEBUG): Aggregate::uninitialize Science:PeakDetectChl
2018-11-05T16:38:17.914Z,1541435897.914 [Science:PeakDetectChl:A.PeakDetectVsDepth] Stopped
2018-11-05T16:38:17.914Z,1541435897.914 [Science:PeakDetectChl:A.PeakDetectVsDepth](DEBUG): Uninitialize.
2018-11-05T16:38:17.914Z,1541435897.914 [Science:Read_Oil] Stopped
2018-11-05T16:38:17.914Z,1541435897.914 [Science:H] Stopped
2018-11-05T16:38:17.914Z,1541435897.914 [Science:G] Running Loop=1
2018-11-05T16:38:17.915Z,1541435897.915 [Science:G](DEBUG): Initialize ReadDataComponent to sense mass_concentration_of_chlorophyll_in_sea_water
2018-11-05T16:38:17.916Z,1541435897.916 [Science:F] Stopped
2018-11-05T16:38:17.916Z,1541435897.916 [Science:E] Stopped
2018-11-05T16:38:17.916Z,1541435897.916 [Science:D] Running Loop=1
2018-11-05T16:38:17.917Z,1541435897.917 [Science:D](DEBUG): Initialize ReadDataComponent to sense CTD_Seabird.sea_water_temperature
2018-11-05T16:38:17.918Z,1541435897.918 [Science:D](DEBUG): Initialize ReadDataComponent to sense CTD_Seabird.sea_water_salinity
2018-11-05T16:38:17.919Z,1541435897.919 [Science:C] Running Loop=1
2018-11-05T16:38:17.920Z,1541435897.920 [Science:C](DEBUG): Initialize ReadDataComponent to sense sea_water_temperature
2018-11-05T16:38:17.946Z,1541435897.946 [Science:C](DEBUG): Initialize ReadDataComponent to sense sea_water_salinity
2018-11-05T16:38:17.947Z,1541435897.947 [Science:B] Stopped
2018-11-05T16:38:17.947Z,1541435897.947 [Science:A] Running Loop=1
2018-11-05T16:38:17.948Z,1541435897.948 [Science:A](DEBUG): Initialize ReadDataComponent to sense mass_concentration_of_oxygen_in_sea_water
2018-11-05T16:38:17.957Z,1541435897.957 [CTD_NeilBrown](DEBUG): Initializing CTD_NeilBrown.
2018-11-05T16:38:17.966Z,1541435897.966 [CTD_NeilBrown](INFO): Opening uart, block timeout 10ths=4
2018-11-05T16:38:18.018Z,1541435898.018 [CTD_Seabird](INFO): Initializing
2018-11-05T16:38:18.018Z,1541435898.018 [CTD_Seabird](INFO): Checking LCM
2018-11-05T16:38:18.018Z,1541435898.018 [CTD_Seabird](INFO): LCM OK
2018-11-05T16:38:18.018Z,1541435898.018 [CTD_Seabird](INFO): Powering up
2018-11-05T16:38:18.025Z,1541435898.025 [WetLabsBB2FL](INFO): Opening uart, block timeout 10ths=2
2018-11-05T16:38:18.025Z,1541435898.025 [WetLabsBB2FL](INFO): Powering up
2018-11-05T16:38:23.419Z,1541435903.419 [CTD_Seabird](INFO): Stopping potential previous instance(s) of CTD_Seabird LCM interface
2018-11-05T16:38:23.596Z,1541435903.596 [CTD_Seabird](INFO): Started Seabird LCM interface with command:nohup ./lrauv-framework/onboard/bin/gpctd -ldir /mnt/mmc/LRAUV/Logs/latest/ -dev /dev/ttyC6 -b 9600 >& /dev/null &
2018-11-05T16:38:23.598Z,1541435903.598 [CTD_Seabird](INFO): LCM subscribed to channel:seabird_gpctd_t.seabird-gpctd
2018-11-05T16:38:25.779Z,1541435905.779 [NAL9602](INFO): SBD MO Status=2, MOMSN=10424, MT Status=2, MTMSN=0
2018-11-05T16:38:25.780Z,1541435905.780 [NAL9602](ERROR): Failed to initiate SBD session. Error code: 2
2018-11-05T16:38:53.093Z,1541435933.093 [CTD_Seabird](FAULT): Did not receive valid device response within the specified allowable sample time.
2018-11-05T16:38:53.094Z,1541435933.094 [CTD_Seabird] Communications Fault, FailCount= 1
2018-11-05T16:38:53.094Z,1541435933.094 [CTD_Seabird](ERROR): Communications Fault
2018-11-05T16:38:53.204Z,1541435933.204 [CBIT](ERROR): Communications Fault in component: CTD_Seabird
2018-11-05T16:38:53.726Z,1541435933.726 [CTD_Seabird](INFO): Stopping potential previous instance(s) of CTD_Seabird LCM interface
2018-11-05T16:38:53.726Z,1541435933.726 [CTD_Seabird](INFO): Powering down
2018-11-05T16:38:54.297Z,1541435934.297 [NAL9602](INFO): SBD MO Status=0, MOMSN=10424, MT Status=0, MTMSN=0
2018-11-05T16:38:54.297Z,1541435934.297 [NAL9602](INFO): No messages in MT queue
2018-11-05T16:38:55.175Z,1541435935.175 [CBIT](INFO): Clearing failed state for component CTD_Seabird
2018-11-05T16:38:55.175Z,1541435935.175 [CTD_Seabird] No Fault, FailCount= 1
2018-11-05T16:38:55.341Z,1541435935.341 [CTD_Seabird](INFO): Initializing
2018-11-05T16:38:55.341Z,1541435935.341 [CTD_Seabird](INFO): Checking LCM
2018-11-05T16:38:55.341Z,1541435935.341 [CTD_Seabird](INFO): LCM OK
2018-11-05T16:38:55.342Z,1541435935.342 [CTD_Seabird](INFO): Powering up
2018-11-05T16:39:00.787Z,1541435940.787 [CTD_Seabird](INFO): Stopping potential previous instance(s) of CTD_Seabird LCM interface
2018-11-05T16:39:00.937Z,1541435940.937 [CTD_Seabird](INFO): Started Seabird LCM interface with command:nohup ./lrauv-framework/onboard/bin/gpctd -ldir /mnt/mmc/LRAUV/Logs/latest/ -dev /dev/ttyC6 -b 9600 >& /dev/null &
2018-11-05T16:39:00.939Z,1541435940.939 [CTD_Seabird](INFO): LCM subscribed to channel:seabird_gpctd_t.seabird-gpctd
2018-11-05T16:39:24.702Z,1541435964.702 [NAL9602](INFO): Powering down
2018-11-05T16:39:30.401Z,1541435970.401 [CTD_Seabird](FAULT): Did not receive valid device response within the specified allowable sample time.
2018-11-05T16:39:30.401Z,1541435970.401 [CTD_Seabird] Communications Fault, FailCount= 2
2018-11-05T16:39:30.401Z,1541435970.401 [CTD_Seabird](ERROR): Communications Fault
2018-11-05T16:39:30.995Z,1541435970.995 [CTD_Seabird](INFO): Stopping potential previous instance(s) of CTD_Seabird LCM interface
2018-11-05T16:39:30.995Z,1541435970.995 [CTD_Seabird](INFO): Powering down
2018-11-05T16:39:31.242Z,1541435971.242 [CBIT](ERROR): Communications Fault in component: CTD_Seabird
2018-11-05T16:39:32.518Z,1541435972.518 [CBIT](INFO): Clearing failed state for component CTD_Seabird
2018-11-05T16:39:32.518Z,1541435972.518 [CTD_Seabird] No Fault, FailCount= 2
2018-11-05T16:39:32.609Z,1541435972.609 [CTD_Seabird](INFO): Initializing
2018-11-05T16:39:32.609Z,1541435972.609 [CTD_Seabird](INFO): Checking LCM
2018-11-05T16:39:32.609Z,1541435972.609 [CTD_Seabird](INFO): LCM OK
2018-11-05T16:39:32.609Z,1541435972.609 [CTD_Seabird](INFO): Powering up
2018-11-05T16:39:37.970Z,1541435977.970 [CTD_Seabird](INFO): Stopping potential previous instance(s) of CTD_Seabird LCM interface
2018-11-05T16:39:38.156Z,1541435978.156 [CTD_Seabird](INFO): Started Seabird LCM interface with command:nohup ./lrauv-framework/onboard/bin/gpctd -ldir /mnt/mmc/LRAUV/Logs/latest/ -dev /dev/ttyC6 -b 9600 >& /dev/null &
2018-11-05T16:39:38.158Z,1541435978.158 [CTD_Seabird](INFO): LCM subscribed to channel:seabird_gpctd_t.seabird-gpctd
2018-11-05T16:40:05.468Z,1541436005.468 [CommandLine](IMPORTANT): got command report touch CTD_NeilBrown.sea_water_temperature
2018-11-05T16:40:05.760Z,1541436005.760 [Reporter](INFO): CTD_NeilBrown.sea_water_temperature 18.952966 degC
2018-11-05T16:40:06.142Z,1541436006.142 [Reporter](INFO): CTD_NeilBrown.sea_water_temperature 18.953027 degC
2018-11-05T16:40:06.550Z,1541436006.550 [Reporter](INFO): CTD_NeilBrown.sea_water_temperature 18.952875 degC
2018-11-05T16:40:06.962Z,1541436006.962 [Reporter](INFO): CTD_NeilBrown.sea_water_temperature 18.953027 degC
2018-11-05T16:40:07.329Z,1541436007.329 [Reporter](INFO): CTD_NeilBrown.sea_water_temperature 18.952448 degC
2018-11-05T16:40:07.649Z,1541436007.649 [CTD_Seabird](FAULT): Did not receive valid device response within the specified allowable sample time.
2018-11-05T16:40:07.649Z,1541436007.649 [CTD_Seabird] Communications Fault, FailCount= 3
2018-11-05T16:40:07.649Z,1541436007.649 [CTD_Seabird](ERROR): Communications Fault
2018-11-05T16:40:07.782Z,1541436007.782 [CBIT](ERROR): Communications Fault in component: CTD_Seabird
2018-11-05T16:40:07.783Z,1541436007.783 [Reporter](INFO): CTD_NeilBrown.sea_water_temperature 18.951959 degC
2018-11-05T16:40:08.210Z,1541436008.210 [Reporter](INFO): CTD_NeilBrown.sea_water_temperature 18.951807 degC
2018-11-05T16:40:08.288Z,1541436008.288 [CTD_Seabird](INFO): Stopping potential previous instance(s) of CTD_Seabird LCM interface
2018-11-05T16:40:08.288Z,1541436008.288 [CTD_Seabird](INFO): Powering down
2018-11-05T16:40:08.563Z,1541436008.563 [Reporter](INFO): CTD_NeilBrown.sea_water_temperature 18.951685 degC
2018-11-05T16:40:08.942Z,1541436008.942 [Reporter](INFO): CTD_NeilBrown.sea_water_temperature 18.950922 degC
2018-11-05T16:40:09.342Z,1541436009.342 [Reporter](INFO): CTD_NeilBrown.sea_water_temperature 18.951349 degC
2018-11-05T16:40:09.758Z,1541436009.758 [CBIT](INFO): Clearing failed state for component CTD_Seabird
2018-11-05T16:40:09.758Z,1541436009.758 [CTD_Seabird] No Fault, FailCount= 3
2018-11-05T16:40:09.759Z,1541436009.759 [Reporter](INFO): CTD_NeilBrown.sea_water_temperature 18.951685 degC
2018-11-05T16:40:09.905Z,1541436009.905 [CTD_Seabird](INFO): Initializing
2018-11-05T16:40:09.905Z,1541436009.905 [CTD_Seabird](INFO): Checking LCM
2018-11-05T16:40:09.905Z,1541436009.905 [CTD_Seabird](INFO): LCM OK
2018-11-05T16:40:09.906Z,1541436009.906 [CTD_Seabird](INFO): Powering up
2018-11-05T16:40:10.155Z,1541436010.155 [Reporter](INFO): CTD_NeilBrown.sea_water_temperature 18.951349 degC
2018-11-05T16:40:10.540Z,1541436010.540 [Reporter](INFO): CTD_NeilBrown.sea_water_temperature 18.951654 degC
2018-11-05T16:40:10.917Z,1541436010.917 [Reporter](INFO): CTD_NeilBrown.sea_water_temperature 18.951471 degC
2018-11-05T16:40:11.327Z,1541436011.327 [Reporter](INFO): CTD_NeilBrown.sea_water_temperature 18.952051 degC
2018-11-05T16:40:11.757Z,1541436011.757 [Reporter](INFO): CTD_NeilBrown.sea_water_temperature 18.951929 degC
2018-11-05T16:40:12.134Z,1541436012.134 [Reporter](INFO): CTD_NeilBrown.sea_water_temperature 18.952203 degC
2018-11-05T16:40:12.539Z,1541436012.539 [Reporter](INFO): CTD_NeilBrown.sea_water_temperature 18.952386 degC
2018-11-05T16:40:12.930Z,1541436012.930 [Reporter](INFO): CTD_NeilBrown.sea_water_temperature 18.952264 degC
2018-11-05T16:40:13.340Z,1541436013.340 [Reporter](INFO): CTD_NeilBrown.sea_water_temperature 18.952631 degC
2018-11-05T16:40:13.750Z,1541436013.750 [Reporter](INFO): CTD_NeilBrown.sea_water_temperature 18.951990 degC
2018-11-05T16:40:14.135Z,1541436014.135 [Reporter](INFO): CTD_NeilBrown.sea_water_temperature 18.951410 degC
2018-11-05T16:40:14.526Z,1541436014.526 [Reporter](INFO): CTD_NeilBrown.sea_water_temperature 18.952509 degC
2018-11-05T16:40:14.947Z,1541436014.947 [Reporter](INFO): CTD_NeilBrown.sea_water_temperature 18.947626 degC
2018-11-05T16:40:15.433Z,1541436015.433 [Reporter](INFO): CTD_NeilBrown.sea_water_temperature 18.952386 degC
2018-11-05T16:40:15.486Z,1541436015.486 [CTD_Seabird](INFO): Stopping potential previous instance(s) of CTD_Seabird LCM interface
2018-11-05T16:40:15.596Z,1541436015.596 [CTD_Seabird](INFO): Started Seabird LCM interface with command:nohup ./lrauv-framework/onboard/bin/gpctd -ldir /mnt/mmc/LRAUV/Logs/latest/ -dev /dev/ttyC6 -b 9600 >& /dev/null &
2018-11-05T16:40:15.598Z,1541436015.598 [CTD_Seabird](INFO): LCM subscribed to channel:seabird_gpctd_t.seabird-gpctd
2018-11-05T16:40:15.817Z,1541436015.817 [Reporter](INFO): CTD_NeilBrown.sea_water_temperature 18.952783 degC
2018-11-05T16:40:16.147Z,1541436016.147 [Reporter](INFO): CTD_NeilBrown.sea_water_temperature 18.952478 degC
2018-11-05T16:40:16.541Z,1541436016.541 [Reporter](INFO): CTD_NeilBrown.sea_water_temperature 18.952509 degC
2018-11-05T16:40:16.943Z,1541436016.943 [Reporter](INFO): CTD_NeilBrown.sea_water_temperature 18.949487 degC
2018-11-05T16:40:17.327Z,1541436017.327 [Reporter](INFO): CTD_NeilBrown.sea_water_temperature 18.952081 degC
2018-11-05T16:40:17.355Z,1541436017.355 [CommandLine](IMPORTANT): got command stop
2018-11-05T16:40:17.355Z,1541436017.355 [CommandLine](IMPORTANT): Scheduling is paused
2018-11-05T16:40:17.355Z,1541436017.355 [Supervisor](INFO): Stop Mission called by CommandLine::commandStop
2018-11-05T16:40:17.725Z,1541436017.725 [MissionManager](INFO): MissionManager is completed.
2018-11-05T16:40:17.725Z,1541436017.725 [MissionManager](INFO): Uninitializing Mission Science
2018-11-05T16:40:17.725Z,1541436017.725 [Science] Stopped
2018-11-05T16:40:17.725Z,1541436017.725 [Science](DEBUG): Aggregate::uninitialize Science
2018-11-05T16:40:17.725Z,1541436017.725 [Science:A] Stopped
2018-11-05T16:40:17.725Z,1541436017.725 [Science:C] Stopped
2018-11-05T16:40:17.725Z,1541436017.725 [Science:D] Stopped
2018-11-05T16:40:17.726Z,1541436017.726 [Science:G] Stopped
2018-11-05T16:40:17.795Z,1541436017.795 [Reporter](INFO): CTD_NeilBrown.sea_water_temperature 18.952539 degC
2018-11-05T16:40:18.111Z,1541436018.111 [MissionManager](IMPORTANT): Started mission Default
2018-11-05T16:40:18.111Z,1541436018.111 [Default] Running Loop=1
2018-11-05T16:40:18.111Z,1541436018.111 [Default](DEBUG): Aggregate::initialize Default
2018-11-05T16:40:18.111Z,1541436018.111 [Default:B.GoToSurface] Running Loop=1
2018-11-05T16:40:18.111Z,1541436018.111 [Default:B.GoToSurface](DEBUG): Initialize GoToSurfaceComponent.
2018-11-05T16:40:18.111Z,1541436018.111 [Default:B.GoToSurface](DEBUG): No depth rate setting specified. Using default value of nan m/s.
2018-11-05T16:40:18.112Z,1541436018.112 [Default:B.GoToSurface](DEBUG): No pitch setting specified. Using default value of nan degrees.
2018-11-05T16:40:18.112Z,1541436018.112 [Default:B.GoToSurface](DEBUG): No speed setting specified. Using default value of 1.000000 m/s.
2018-11-05T16:40:18.117Z,1541436018.117 [Default:B.GoToSurface](DEBUG): No surface timeout specified. Using default value of 1000.000000 seconds.
2018-11-05T16:40:18.117Z,1541436018.117 [Default:B.GoToSurface](INFO): Received pitch timeout configuration 60.000000 seconds.
2018-11-05T16:40:18.118Z,1541436018.118 [Default:A.Wait] Running Loop=1
2018-11-05T16:40:18.118Z,1541436018.118 [Default:A.Wait](DEBUG): Initialize Wait Component.
2018-11-05T16:40:18.145Z,1541436018.145 [WetLabsBB2FL](INFO): Powering down
2018-11-05T16:40:18.491Z,1541436018.491 [Aanderaa_O2](INFO): Powering down
2018-11-05T16:40:18.692Z,1541436018.692 [CTD_Seabird](INFO): Stopping potential previous instance(s) of CTD_Seabird LCM interface
2018-11-05T16:40:18.692Z,1541436018.692 [CTD_Seabird](INFO): Powering down
2018-11-05T16:40:31.420Z,1541436031.420 [Default:A.Wait](INFO): Done Waiting.
2018-11-05T16:40:31.420Z,1541436031.420 [Default:A.Wait] Stopped
2018-11-05T16:40:31.420Z,1541436031.420 [Default:A.Wait](DEBUG): Uninitialize Wait Component.
2018-11-05T16:40:31.833Z,1541436031.833 [Default:CheckIn] Running Loop=1
2018-11-05T16:40:31.833Z,1541436031.833 [Default:CheckIn](DEBUG): Aggregate::initialize Default:CheckIn
2018-11-05T16:40:31.834Z,1541436031.834 [Default:CheckIn:Read_GPS] Running Loop=1
2018-11-05T16:40:32.574Z,1541436032.574 [NAL9602](INFO): Powering up
2018-11-05T16:40:42.667Z,1541436042.667 [CommandLine](IMPORTANT): got command configSet CTD_Seabird.loadAtStartup 0.000000 bool persist
2018-11-05T16:40:42.667Z,1541436042.667 [CommandLine](IMPORTANT): configSet CTD_Seabird.loadAtStartup requires a restart to take effect.
2018-11-05T16:40:43.782Z,1541436043.782 [NAL9602](INFO): NAL9602 initialized
2018-11-05T16:40:44.574Z,1541436044.574 [NAL9602](FAULT): GPS failed to acquire within timeout.
2018-11-05T16:40:44.574Z,1541436044.574 [NAL9602] Data Fault, FailCount= 1
2018-11-05T16:40:44.574Z,1541436044.574 [NAL9602](ERROR): Data Fault
2018-11-05T16:40:44.667Z,1541436044.667 [CBIT](ERROR): Data Fault in component: NAL9602
2018-11-05T16:40:44.974Z,1541436044.974 [NAL9602](INFO): Powering down
2018-11-05T16:40:45.835Z,1541436045.835 [CBIT](INFO): Clearing failed state for component NAL9602
2018-11-05T16:40:45.835Z,1541436045.835 [NAL9602] No Fault, FailCount= 1
2018-11-05T16:41:05.876Z,1541436065.876 [CommandLine](IMPORTANT): got command restart application
2018-11-05T16:41:06.884Z,1541436066.884 [CommandLine ThreadHandler](INFO): Uninitializing protected caller thread.
2018-11-05T16:41:06.884Z,1541436066.884 [CommandLine ThreadHandler](INFO): Thread cancelled.
2018-11-05T16:41:06.953Z,1541436066.953 [Supervisor](DEBUG): Uninitializing supervisor and starting cleanup.  Bye!
2018-11-05T16:41:06.953Z,1541436066.953 [CommandLine ThreadHandler](INFO): Thread cancelled.
2018-11-05T16:41:06.953Z,1541436066.953 [CommandLine](INFO): Join timeout helper Thread ID is 9337
2018-11-05T16:41:06.954Z,1541436066.954 [ComponentRegistry](INFO): Shutting down NavChartDb ThreadHandler
2018-11-05T16:41:06.954Z,1541436066.954 [NavChartDb ThreadHandler](INFO): Thread cancelled.
2018-11-05T16:41:06.954Z,1541436066.954 [NavChartDb](INFO): Join timeout helper Thread ID is 9338
2018-11-05T16:41:07.177Z,1541436067.177 [NavChartDb ThreadHandler](INFO): Uninitializing protected caller thread.
2018-11-05T16:41:07.177Z,1541436067.177 [NavChartDb ThreadHandler](INFO): Thread cancelled.
2018-11-05T16:41:07.189Z,1541436067.189 [ComponentRegistry](INFO): Shutting down WetLabsBB2FL ThreadHandler
2018-11-05T16:41:07.189Z,1541436067.189 [WetLabsBB2FL ThreadHandler](INFO): Thread cancelled.
2018-11-05T16:41:07.189Z,1541436067.189 [WetLabsBB2FL](INFO): Join timeout helper Thread ID is 9339
2018-11-05T16:41:07.561Z,1541436067.561 [WetLabsBB2FL ThreadHandler](INFO): Uninitializing protected caller thread.
2018-11-05T16:41:07.561Z,1541436067.561 [WetLabsBB2FL](INFO): Powering down
2018-11-05T16:41:07.562Z,1541436067.562 [WetLabsBB2FL ThreadHandler](INFO): Thread cancelled.
2018-11-05T16:41:07.577Z,1541436067.577 [ComponentRegistry](INFO): Shutting down CTD_Seabird ThreadHandler
2018-11-05T16:41:07.577Z,1541436067.577 [CTD_Seabird ThreadHandler](INFO): Thread cancelled.
2018-11-05T16:41:07.577Z,1541436067.577 [CTD_Seabird](INFO): Join timeout helper Thread ID is 9340
2018-11-05T16:41:07.601Z,1541436067.601 [CTD_Seabird ThreadHandler](INFO): Uninitializing protected caller thread.
2018-11-05T16:41:07.685Z,1541436067.685 [CTD_Seabird](INFO): Stopping potential previous instance(s) of CTD_Seabird LCM interface
2018-11-05T16:41:07.686Z,1541436067.686 [CTD_Seabird](INFO): Powering down
2018-11-05T16:41:07.687Z,1541436067.687 [CTD_Seabird ThreadHandler](INFO): Thread cancelled.
2018-11-05T16:41:07.701Z,1541436067.701 [ComponentRegistry](INFO): Shutting down CTD_NeilBrown ThreadHandler
2018-11-05T16:41:07.701Z,1541436067.701 [CTD_NeilBrown ThreadHandler](INFO): Thread cancelled.
2018-11-05T16:41:07.701Z,1541436067.701 [CTD_NeilBrown](INFO): Join timeout helper Thread ID is 9342
2018-11-05T16:41:07.885Z,1541436067.885 [CTD_NeilBrown ThreadHandler](INFO): Uninitializing protected caller thread.
2018-11-05T16:41:07.885Z,1541436067.885 [CTD_NeilBrown](INFO): Powering down
2018-11-05T16:41:07.897Z,1541436067.897 [CTD_NeilBrown ThreadHandler](INFO): Thread cancelled.
2018-11-05T16:41:07.902Z,1541436067.902 [ComponentRegistry](INFO): Shutting down Rowe_600LCM ThreadHandler
2018-11-05T16:41:07.902Z,1541436067.902 [Rowe_600LCM ThreadHandler](INFO): Thread cancelled.
2018-11-05T16:41:07.902Z,1541436067.902 [Rowe_600LCM](INFO): Join timeout helper Thread ID is 9343
2018-11-05T16:41:08.253Z,1541436068.253 [Rowe_600LCM ThreadHandler](INFO): Uninitializing protected caller thread.
2018-11-05T16:41:08.253Z,1541436068.253 [Rowe_600LCM](INFO): Stopping potential previous instance(s) of roweadcp LCM interface
2018-11-05T16:41:08.381Z,1541436068.381 [Rowe_600LCM](INFO): Powering down
2018-11-05T16:41:08.382Z,1541436068.382 [Rowe_600LCM ThreadHandler](INFO): Thread cancelled.
2018-11-05T16:41:08.386Z,1541436068.386 [ComponentRegistry](INFO): Shutting down Radio_Surface ThreadHandler
2018-11-05T16:41:08.386Z,1541436068.386 [Radio_Surface ThreadHandler](INFO): Thread cancelled.
2018-11-05T16:41:08.387Z,1541436068.387 [Radio_Surface](INFO): Join timeout helper Thread ID is 9345
2018-11-05T16:41:08.593Z,1541436068.593 [Radio_Surface ThreadHandler](INFO): Uninitializing protected caller thread.
2018-11-05T16:41:08.593Z,1541436068.593 [Radio_Surface ThreadHandler](INFO): Thread cancelled.
2018-11-05T16:41:08.610Z,1541436068.610 [ComponentRegistry](INFO): Shutting down logger ThreadHandler
2018-11-05T16:41:08.610Z,1541436068.610 [logger ThreadHandler](INFO): Thread cancelled.
2018-11-05T16:41:08.610Z,1541436068.610 [logger](INFO): Join timeout helper Thread ID is 9346
2018-11-05T16:41:08.629Z,1541436068.629 [logger ThreadHandler](INFO): Uninitializing protected caller thread.
2018-11-05T16:41:08.629Z,1541436068.629 [logger ThreadHandler](INFO): Thread cancelled.
2018-11-05T16:41:08.645Z,1541436068.645 [ComponentRegistry](INFO): Shutting down CommandLine ThreadHandler
2018-11-05T16:41:08.646Z,1541436068.646 [CommandLine ThreadHandler](INFO): Thread cancelled.
2018-11-05T16:41:08.646Z,1541436068.646 [ComponentRegistry](INFO): Shutting down controlThread ThreadHandler
2018-11-05T16:41:08.646Z,1541436068.646 [controlThread ThreadHandler](INFO): Thread cancelled.
2018-11-05T16:41:08.646Z,1541436068.646 [controlThread](INFO): Join timeout helper Thread ID is 9347
2018-11-05T16:41:08.660Z,1541436068.660 [controlThread ThreadHandler](INFO): Uninitializing protected caller thread.
2018-11-05T16:41:08.660Z,1541436068.660 [controlThread](DEBUG): Uninitializing ControlThread
2018-11-05T16:41:08.661Z,1541436068.661 [NAL9602](INFO): Powering down
2018-11-05T16:41:08.662Z,1541436068.662 [PNI_TCM](INFO): Powering down
2018-11-05T16:41:08.749Z,1541436068.749 [Aanderaa_O2](INFO): Powering down
2018-11-05T16:41:08.750Z,1541436068.750 [DepthRateCalculator](DEBUG): Initializing DepthRateCalculator.
2018-11-05T16:41:08.751Z,1541436068.751 [ElevatorOffsetCalculator](DEBUG): Uninitializing ElevatorOffsetCalculator.
2018-11-05T16:41:08.752Z,1541436068.752 [NavChart](DEBUG): Uninitialize NavChart Navigation.
2018-11-05T16:41:08.753Z,1541436068.753 [MissionManager](INFO): Uninitializing Mission Default
2018-11-05T16:41:08.753Z,1541436068.753 [Default] Stopped
2018-11-05T16:41:08.753Z,1541436068.753 [Default](DEBUG): Aggregate::uninitialize Default
2018-11-05T16:41:08.753Z,1541436068.753 [Default:B.GoToSurface] Stopped
2018-11-05T16:41:08.753Z,1541436068.753 [Default:B.GoToSurface](DEBUG): Uninitialize GoToSurfaceComponent.
2018-11-05T16:41:08.753Z,1541436068.753 [Default:CheckIn] Stopped
2018-11-05T16:41:08.753Z,1541436068.753 [Default:CheckIn](DEBUG): Aggregate::uninitialize Default:CheckIn
2018-11-05T16:41:08.753Z,1541436068.753 [Default:CheckIn:Read_GPS] Stopped
2018-11-05T16:41:08.757Z,1541436068.757 [VerticalControl](DEBUG): Uninitialize VerticalControlComponent.
2018-11-05T16:41:08.758Z,1541436068.758 [HorizontalControl](DEBUG): Uninitialize HorizontalControlComponent.
2018-11-05T16:41:08.758Z,1541436068.758 [SpeedControl](DEBUG): Uninitialize SpeedControlComponent.
2018-11-05T16:41:08.758Z,1541436068.758 [LoopControl](DEBUG): Uninitialize LoopControlComponent.
2018-11-05T16:41:08.759Z,1541436068.759 [BuoyancyServo](DEBUG): Uninitialize Buoyancy Servo.
2018-11-05T16:41:08.759Z,1541436068.759 [BuoyancyServo](INFO): Powering down
2018-11-05T16:41:08.773Z,1541436068.773 [ElevatorServo](DEBUG): Uninitialize Elevator Servo.
2018-11-05T16:41:08.773Z,1541436068.773 [ElevatorServo](INFO): Powering down
2018-11-05T16:41:08.774Z,1541436068.774 [MassServo](DEBUG): Uninitialize Mass Servo.
2018-11-05T16:41:08.774Z,1541436068.774 [MassServo](INFO): Powering down
2018-11-05T16:41:08.775Z,1541436068.775 [RudderServo](DEBUG): Uninitialize Rudder Servo.
2018-11-05T16:41:08.775Z,1541436068.775 [RudderServo](INFO): Powering down
2018-11-05T16:41:08.776Z,1541436068.776 [ThrusterServo](DEBUG): Uninitialize Thruster Servo.
2018-11-05T16:41:08.776Z,1541436068.776 [ThrusterServo](INFO): Powering down
2018-11-05T16:41:08.777Z,1541436068.777 [SBIT](DEBUG): Uninitialize SBIT Component.
2018-11-05T16:41:08.777Z,1541436068.777 [IBIT](DEBUG): Uninitialize IBIT Component.
2018-11-05T16:41:08.778Z,1541436068.778 [CBIT](DEBUG): Uninitialize CBIT Component.
2018-11-05T16:41:08.778Z,1541436068.778 [controlThread ThreadHandler](INFO): Thread cancelled.
2018-11-05T16:41:08.848Z,1541436068.848 [Rowe_600LCM ThreadHandler](INFO): Thread cancelled.
2018-11-05T16:41:08.854Z,1541436068.854 [Radio_Surface ThreadHandler](INFO): Thread cancelled.
2018-11-05T16:41:08.892Z,1541436068.892 [WetLabsBB2FL ThreadHandler](INFO): Thread cancelled.
2018-11-05T16:41:08.895Z,1541436068.895 [CTD_Seabird ThreadHandler](INFO): Thread cancelled.
2018-11-05T16:41:08.898Z,1541436068.898 [CTD_NeilBrown ThreadHandler](INFO): Thread cancelled.
2018-11-05T16:41:08.925Z,1541436068.925 [NavChartDb ThreadHandler](INFO): Thread cancelled.
2018-11-05T16:41:08.993Z,1541436068.993 [logger ThreadHandler](INFO): Thread cancelled.