2018-11-02T18:01:22.336Z,1541181682.336 [Supervisor](DEBUG): Initializing supervisor.
2018-11-02T18:01:22.339Z,1541181682.339 [SyncHandler](DEBUG): Created PCaller Thread at 404514E0
2018-11-02T18:01:22.340Z,1541181682.340 [SyncHandler](INFO): Protected caller Thread ID is 797
2018-11-02T18:01:22.340Z,1541181682.340 [ComponentRegistry](DEBUG): Component "controlThread" handled in its own thread.
2018-11-02T18:01:22.341Z,1541181682.341 [controlThread ThreadHandler](DEBUG): Created PCaller Thread at 404814E0
2018-11-02T18:01:22.342Z,1541181682.342 [controlThread ThreadHandler](INFO): Protected caller Thread ID is 798
2018-11-02T18:01:22.344Z,1541181682.344 [ComponentRegistry](DEBUG): SyncComponent "CycleStarter" handled in the control thread.
2018-11-02T18:01:22.356Z,1541181682.356 [ComponentRegistry](DEBUG): Component "CommandLine" handled in its own thread.
2018-11-02T18:01:22.357Z,1541181682.357 [CommandLine ThreadHandler](DEBUG): Created PCaller Thread at 404B14E0
2018-11-02T18:01:22.358Z,1541181682.358 [CommandLine ThreadHandler](INFO): Protected caller Thread ID is 799
2018-11-02T18:01:22.359Z,1541181682.359 [ComponentRegistry](DEBUG): Component "logger" handled in its own thread.
2018-11-02T18:01:22.359Z,1541181682.359 [logger ThreadHandler](DEBUG): Created PCaller Thread at 404E14E0
2018-11-02T18:01:22.360Z,1541181682.360 [logger ThreadHandler](INFO): Protected caller Thread ID is 800
2018-11-02T18:01:22.362Z,1541181682.362 [ComponentRegistry](DEBUG): SyncComponent "LogSplitter" handled in the control thread.
2018-11-02T18:01:22.362Z,1541181682.362 [Supervisor](INFO): Looking for Config files in directory: Config/
2018-11-02T18:01:22.366Z,1541181682.366 [Supervisor](INFO): Opening Config file at: Config/Control.cfg
2018-11-02T18:01:22.706Z,1541181682.706 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Control
2018-11-02T18:01:22.708Z,1541181682.708 [Supervisor](INFO): Opening Config file at: Config/logger.cfg
2018-11-02T18:01:22.909Z,1541181682.909 [ComponentRegistry](DEBUG): Loaded Config Component "Config/logger
2018-11-02T18:01:22.911Z,1541181682.911 [Supervisor](INFO): Opening Config file at: Config/Servo.cfg
2018-11-02T18:01:23.211Z,1541181683.211 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Servo
2018-11-02T18:01:23.212Z,1541181683.212 [Supervisor](INFO): Opening Config file at: Config/Derivation.cfg
2018-11-02T18:01:23.358Z,1541181683.358 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Derivation
2018-11-02T18:01:23.360Z,1541181683.360 [Supervisor](INFO): Opening Config file at: Config/Sample.cfg
2018-11-02T18:01:23.459Z,1541181683.459 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Sample
2018-11-02T18:01:23.461Z,1541181683.461 [Supervisor](INFO): Opening Config file at: Config/Simulator.cfg
2018-11-02T18:01:23.924Z,1541181683.924 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Simulator
2018-11-02T18:01:23.925Z,1541181683.925 [Supervisor](INFO): Opening Config file at: Config/Sensor.cfg
2018-11-02T18:01:24.404Z,1541181684.404 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Sensor
2018-11-02T18:01:24.405Z,1541181684.405 [Supervisor](INFO): Opening Config file at: Config/vehicle.cfg
2018-11-02T18:01:24.876Z,1541181684.876 [ComponentRegistry](DEBUG): Loaded Config Component "Config/vehicle
2018-11-02T18:01:24.877Z,1541181684.877 [Supervisor](INFO): Opening Config file at: Config/workSite.cfg
2018-11-02T18:01:24.981Z,1541181684.981 [ComponentRegistry](DEBUG): Loaded Config Component "Config/workSite
2018-11-02T18:01:24.982Z,1541181684.982 [Supervisor](INFO): Opening Config file at: Config/secure.cfg
2018-11-02T18:01:25.079Z,1541181685.079 [ComponentRegistry](DEBUG): Loaded Config Component "Config/secure
2018-11-02T18:01:25.080Z,1541181685.080 [Supervisor](INFO): Opening Config file at: Config/Navigation.cfg
2018-11-02T18:01:25.301Z,1541181685.301 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Navigation
2018-11-02T18:01:25.302Z,1541181685.302 [Supervisor](INFO): Opening Config file at: Config/BIT.cfg
2018-11-02T18:01:25.508Z,1541181685.508 [ComponentRegistry](DEBUG): Loaded Config Component "Config/BIT
2018-11-02T18:01:25.510Z,1541181685.510 [Supervisor](INFO): Opening Config file at: Config/Science.cfg
2018-11-02T18:01:25.868Z,1541181685.868 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Science
2018-11-02T18:01:26.196Z,1541181686.196 [Supervisor](INFO): Opening Config file at: Config/Estimation.cfg
2018-11-02T18:01:26.481Z,1541181686.481 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Estimation
2018-11-02T18:01:26.481Z,1541181686.481 [Supervisor](INFO): Opening Config file at: Config/Guidance.cfg
2018-11-02T18:01:26.564Z,1541181686.564 [Supervisor](INFO): Looking for Config files in directory: Config/lrauv-daphne/
2018-11-02T18:01:26.567Z,1541181686.567 [Supervisor](INFO): Opening Config file at: Config/lrauv-daphne/Control.cfg
2018-11-02T18:01:26.671Z,1541181686.671 [Supervisor](INFO): Opening Config file at: Config/lrauv-daphne/logger.cfg
2018-11-02T18:01:26.790Z,1541181686.790 [Supervisor](INFO): Opening Config file at: Config/lrauv-daphne/Servo.cfg
2018-11-02T18:01:26.887Z,1541181686.887 [Supervisor](INFO): Opening Config file at: Config/lrauv-daphne/Simulator.cfg
2018-11-02T18:01:26.972Z,1541181686.972 [Supervisor](INFO): Opening Config file at: Config/lrauv-daphne/Sensor.cfg
2018-11-02T18:01:27.178Z,1541181687.178 [Supervisor](INFO): Opening Config file at: Config/lrauv-daphne/vehicle.cfg
2018-11-02T18:01:27.409Z,1541181687.409 [Supervisor](INFO): Opening Config file at: Config/lrauv-daphne/workSite.cfg
2018-11-02T18:01:27.486Z,1541181687.486 [Supervisor](INFO): Opening Config file at: Config/lrauv-daphne/Battery.cfg
2018-11-02T18:01:27.716Z,1541181687.716 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Battery
2018-11-02T18:01:27.717Z,1541181687.717 [Supervisor](INFO): Opening Config file at: Config/lrauv-daphne/secure.cfg
2018-11-02T18:01:27.801Z,1541181687.801 [Supervisor](INFO): Opening Config file at: Config/lrauv-daphne/Navigation.cfg
2018-11-02T18:01:27.893Z,1541181687.893 [Supervisor](INFO): Opening Config file at: Config/lrauv-daphne/BIT.cfg
2018-11-02T18:01:27.996Z,1541181687.996 [Supervisor](INFO): Opening Config file at: Config/lrauv-daphne/Science.cfg
2018-11-02T18:01:28.124Z,1541181688.124 [Supervisor](IMPORTANT): Reading configuration overrides from Data/persisted.cfg
2018-11-02T18:01:28.141Z,1541181688.141 [Module Loader](DEBUG): Loading Module at Modules/Guidance.so
2018-11-02T18:01:28.427Z,1541181688.427 [Module Loader](DEBUG): Loaded Module: Guidance (Contains behaviors and commands)
2018-11-02T18:01:28.429Z,1541181688.429 [Module Loader](DEBUG): Loading Module at Modules/Derivation.so
2018-11-02T18:01:28.486Z,1541181688.486 [DepthRateCalculator] Loaded
2018-11-02T18:01:28.486Z,1541181688.486 [ComponentRegistry](DEBUG): SyncComponent "DepthRateCalculator" handled in the control thread.
2018-11-02T18:01:28.492Z,1541181688.492 [PitchRateCalculator] Loaded
2018-11-02T18:01:28.493Z,1541181688.493 [ComponentRegistry](DEBUG): SyncComponent "PitchRateCalculator" handled in the control thread.
2018-11-02T18:01:28.509Z,1541181688.509 [SpeedCalculator] Loaded
2018-11-02T18:01:28.510Z,1541181688.510 [ComponentRegistry](DEBUG): SyncComponent "SpeedCalculator" handled in the control thread.
2018-11-02T18:01:28.531Z,1541181688.531 [TempGradientCalculator] Loaded
2018-11-02T18:01:28.531Z,1541181688.531 [ComponentRegistry](DEBUG): SyncComponent "TempGradientCalculator" handled in the control thread.
2018-11-02T18:01:28.537Z,1541181688.537 [YawRateCalculator] Loaded
2018-11-02T18:01:28.537Z,1541181688.537 [ComponentRegistry](DEBUG): SyncComponent "YawRateCalculator" handled in the control thread.
2018-11-02T18:01:28.577Z,1541181688.577 [ElevatorOffsetCalculator] Loaded
2018-11-02T18:01:28.578Z,1541181688.578 [ComponentRegistry](DEBUG): SyncComponent "ElevatorOffsetCalculator" handled in the control thread.
2018-11-02T18:01:28.578Z,1541181688.578 [Module Loader](DEBUG): Loaded Module: Derivation (Contains the base derivation components)
2018-11-02T18:01:28.579Z,1541181688.579 [Module Loader](DEBUG): Loading Module at Modules/Estimation.so
2018-11-02T18:01:28.682Z,1541181688.682 [Module Loader](DEBUG): Loaded Module: Estimation (Contains the base estimation components)
2018-11-02T18:01:28.684Z,1541181688.684 [Module Loader](DEBUG): Loading Module at Modules/Servo.so
2018-11-02T18:01:28.819Z,1541181688.819 [BuoyancyServo] Loaded
2018-11-02T18:01:28.819Z,1541181688.819 [ComponentRegistry](DEBUG): SyncComponent "BuoyancyServo" handled in the control thread.
2018-11-02T18:01:28.834Z,1541181688.834 [ElevatorServo] Loaded
2018-11-02T18:01:28.834Z,1541181688.834 [ComponentRegistry](DEBUG): SyncComponent "ElevatorServo" handled in the control thread.
2018-11-02T18:01:28.849Z,1541181688.849 [MassServo] Loaded
2018-11-02T18:01:28.849Z,1541181688.849 [ComponentRegistry](DEBUG): SyncComponent "MassServo" handled in the control thread.
2018-11-02T18:01:28.865Z,1541181688.865 [RudderServo] Loaded
2018-11-02T18:01:28.865Z,1541181688.865 [ComponentRegistry](DEBUG): SyncComponent "RudderServo" handled in the control thread.
2018-11-02T18:01:28.880Z,1541181688.880 [ThrusterServo] Loaded
2018-11-02T18:01:28.880Z,1541181688.880 [ComponentRegistry](DEBUG): SyncComponent "ThrusterServo" handled in the control thread.
2018-11-02T18:01:28.880Z,1541181688.880 [Module Loader](DEBUG): Loaded Module: Servo (This is the module containing motor controllers)
2018-11-02T18:01:28.881Z,1541181688.881 [Module Loader](DEBUG): Loading Module at Modules/Sample.so
2018-11-02T18:01:28.905Z,1541181688.905 [Module Loader](DEBUG): Loaded Module: Sample (This is a Sample Module of Sample Components)
2018-11-02T18:01:28.906Z,1541181688.906 [Module Loader](DEBUG): Loading Module at Modules/Simulator.so
2018-11-02T18:01:29.035Z,1541181689.035 [Module Loader](DEBUG): Loaded Module: Simulator (This is the module containing the Simulator)
2018-11-02T18:01:29.036Z,1541181689.036 [Module Loader](DEBUG): Loading Module at Modules/Sensor.so
2018-11-02T18:01:29.612Z,1541181689.612 [DataOverHttps] Loaded
2018-11-02T18:01:29.612Z,1541181689.612 [ComponentRegistry](DEBUG): SyncComponent "DataOverHttps" handled in the control thread.
2018-11-02T18:01:29.626Z,1541181689.626 [Depth_Keller] Loaded
2018-11-02T18:01:29.626Z,1541181689.626 [ComponentRegistry](DEBUG): SyncComponent "Depth_Keller" handled in the control thread.
2018-11-02T18:01:29.631Z,1541181689.631 [DropWeight] Loaded
2018-11-02T18:01:29.631Z,1541181689.631 [ComponentRegistry](DEBUG): SyncComponent "DropWeight" handled in the control thread.
2018-11-02T18:01:29.729Z,1541181689.729 [NAL9602] Loaded
2018-11-02T18:01:29.730Z,1541181689.730 [ComponentRegistry](DEBUG): SyncComponent "NAL9602" handled in the control thread.
2018-11-02T18:01:29.746Z,1541181689.746 [Onboard] Loaded
2018-11-02T18:01:29.746Z,1541181689.746 [ComponentRegistry](DEBUG): SyncComponent "Onboard" handled in the control thread.
2018-11-02T18:01:29.757Z,1541181689.757 [Radio_Surface] Loaded
2018-11-02T18:01:29.757Z,1541181689.757 [ComponentRegistry](DEBUG): Component "Radio_Surface" handled in its own thread.
2018-11-02T18:01:29.758Z,1541181689.758 [Radio_Surface ThreadHandler](DEBUG): Created PCaller Thread at 4088F4E0
2018-11-02T18:01:29.758Z,1541181689.758 [Radio_Surface ThreadHandler](INFO): Protected caller Thread ID is 883
2018-11-02T18:01:29.911Z,1541181689.911 [PNI_TCM] Loaded
2018-11-02T18:01:29.911Z,1541181689.911 [ComponentRegistry](DEBUG): SyncComponent "PNI_TCM" handled in the control thread.
2018-11-02T18:01:29.972Z,1541181689.972 [Rowe_600LCM] Loaded
2018-11-02T18:01:29.973Z,1541181689.973 [ComponentRegistry](DEBUG): Component "Rowe_600LCM" handled in its own thread.
2018-11-02T18:01:29.974Z,1541181689.974 [Rowe_600LCM ThreadHandler](DEBUG): Created PCaller Thread at 408BF4E0
2018-11-02T18:01:29.974Z,1541181689.974 [Rowe_600LCM ThreadHandler](INFO): Protected caller Thread ID is 884
2018-11-02T18:01:29.975Z,1541181689.975 [Module Loader](DEBUG): Loaded Module: Sensor (Contains the sensor components)
2018-11-02T18:01:29.975Z,1541181689.975 [Module Loader](DEBUG): Loading Module at Modules/BIT.so
2018-11-02T18:01:30.129Z,1541181690.129 [SBIT](DEBUG): Construct Startup Built In Test.
2018-11-02T18:01:30.152Z,1541181690.152 [SBIT] Loaded
2018-11-02T18:01:30.152Z,1541181690.152 [ComponentRegistry](DEBUG): SyncComponent "SBIT" handled in the control thread.
2018-11-02T18:01:30.153Z,1541181690.153 [IBIT](DEBUG): Construct Initiated Built In Test.
2018-11-02T18:01:30.165Z,1541181690.165 [IBIT] Loaded
2018-11-02T18:01:30.166Z,1541181690.166 [ComponentRegistry](DEBUG): SyncComponent "IBIT" handled in the control thread.
2018-11-02T18:01:30.169Z,1541181690.169 [CBIT](DEBUG): Construct Continuous Built In Test.
2018-11-02T18:01:30.318Z,1541181690.318 [CBIT] Loaded
2018-11-02T18:01:30.319Z,1541181690.319 [ComponentRegistry](DEBUG): SyncComponent "CBIT" handled in the control thread.
2018-11-02T18:01:30.319Z,1541181690.319 [Module Loader](DEBUG): Loaded Module: BIT (Contains the BuiltInTest components, such as C Built In Test)
2018-11-02T18:01:30.320Z,1541181690.320 [Module Loader](DEBUG): Loading Module at Modules/Science.so
2018-11-02T18:01:30.528Z,1541181690.528 [Aanderaa_O2] Loaded
2018-11-02T18:01:30.529Z,1541181690.529 [ComponentRegistry](DEBUG): SyncComponent "Aanderaa_O2" handled in the control thread.
2018-11-02T18:01:30.543Z,1541181690.543 [PAR_Licor] Loaded
2018-11-02T18:01:30.544Z,1541181690.544 [ComponentRegistry](DEBUG): SyncComponent "PAR_Licor" handled in the control thread.
2018-11-02T18:01:30.593Z,1541181690.593 [WetLabsBB2FL] Loaded
2018-11-02T18:01:30.593Z,1541181690.593 [ComponentRegistry](DEBUG): Component "WetLabsBB2FL" handled in its own thread.
2018-11-02T18:01:30.595Z,1541181690.595 [WetLabsBB2FL ThreadHandler](DEBUG): Created PCaller Thread at 4098A4E0
2018-11-02T18:01:30.595Z,1541181690.595 [WetLabsBB2FL ThreadHandler](INFO): Protected caller Thread ID is 885
2018-11-02T18:01:30.596Z,1541181690.596 [Module Loader](DEBUG): Loaded Module: Science (Contains the science components)
2018-11-02T18:01:30.596Z,1541181690.596 [Module Loader](DEBUG): Loading Module at Modules/Control.so
2018-11-02T18:01:30.686Z,1541181690.686 [VerticalControl](DEBUG): Construct VerticalControl.
2018-11-02T18:01:30.771Z,1541181690.771 [VerticalControl] Loaded
2018-11-02T18:01:30.771Z,1541181690.771 [ComponentRegistry](DEBUG): SyncComponent "VerticalControl" handled in the control thread.
2018-11-02T18:01:30.772Z,1541181690.772 [HorizontalControl](DEBUG): Construct HorizontalControl.
2018-11-02T18:01:30.830Z,1541181690.830 [HorizontalControl] Loaded
2018-11-02T18:01:30.830Z,1541181690.830 [ComponentRegistry](DEBUG): SyncComponent "HorizontalControl" handled in the control thread.
2018-11-02T18:01:30.831Z,1541181690.831 [SpeedControl](DEBUG): Construct SpeedControl.
2018-11-02T18:01:30.833Z,1541181690.833 [SpeedControl] Loaded
2018-11-02T18:01:30.833Z,1541181690.833 [ComponentRegistry](DEBUG): SyncComponent "SpeedControl" handled in the control thread.
2018-11-02T18:01:30.834Z,1541181690.834 [LoopControl](DEBUG): Construct LoopControl.
2018-11-02T18:01:30.834Z,1541181690.834 [LoopControl] Loaded
2018-11-02T18:01:30.834Z,1541181690.834 [ComponentRegistry](DEBUG): SyncComponent "LoopControl" handled in the control thread.
2018-11-02T18:01:30.835Z,1541181690.835 [Module Loader](DEBUG): Loaded Module: Control (Contains the Control components, such as Depth, Heading, and Speed Control)
2018-11-02T18:01:30.836Z,1541181690.836 [Module Loader](DEBUG): Loading Module at Modules/Trigger.so
2018-11-02T18:01:30.873Z,1541181690.873 [Module Loader](DEBUG): Loaded Module: Trigger (Contains triggers for use in missions)
2018-11-02T18:01:30.874Z,1541181690.874 [Module Loader](DEBUG): Loading Module at Modules/Navigation.so
2018-11-02T18:01:31.023Z,1541181691.023 [DeadReckonUsingSpeedCalculator] Loaded
2018-11-02T18:01:31.023Z,1541181691.023 [ComponentRegistry](DEBUG): SyncComponent "DeadReckonUsingSpeedCalculator" handled in the control thread.
2018-11-02T18:01:31.074Z,1541181691.074 [NavChart] Loaded
2018-11-02T18:01:31.074Z,1541181691.074 [ComponentRegistry](DEBUG): SyncComponent "NavChart" handled in the control thread.
2018-11-02T18:01:31.078Z,1541181691.078 [UniversalFixResidualReporter] Loaded
2018-11-02T18:01:31.079Z,1541181691.079 [ComponentRegistry](DEBUG): SyncComponent "UniversalFixResidualReporter" handled in the control thread.
2018-11-02T18:01:31.079Z,1541181691.079 [Module Loader](DEBUG): Loaded Module: Navigation (Contains the base navigation components)
2018-11-02T18:01:31.090Z,1541181691.090 [ComponentRegistry](DEBUG): SyncComponent "MissionManager" handled in the control thread.
2018-11-02T18:01:31.091Z,1541181691.091 [ComponentRegistry](DEBUG): SyncComponent "Reporter" handled in the control thread.
2018-11-02T18:01:31.106Z,1541181691.106 [ComponentRegistry](DEBUG): Component "NavChartDb" handled in its own thread.
2018-11-02T18:01:31.107Z,1541181691.107 [NavChartDb ThreadHandler](DEBUG): Created PCaller Thread at 40A164E0
2018-11-02T18:01:31.107Z,1541181691.107 [NavChartDb ThreadHandler](INFO): Protected caller Thread ID is 886
2018-11-02T18:01:31.112Z,1541181691.112 [Supervisor](INFO): Main Thread ID is 795
2018-11-02T18:01:31.112Z,1541181691.112 [Supervisor](DEBUG): Running supervisor.
2018-11-02T18:01:31.121Z,1541181691.121 [CommandLine ThreadHandler](INFO): Handler Thread ID is 887
2018-11-02T18:01:31.124Z,1541181691.124 [controlThread ThreadHandler](INFO): Handler Thread ID is 888
2018-11-02T18:01:31.124Z,1541181691.124 [logger ThreadHandler](INFO): Handler Thread ID is 889
2018-11-02T18:01:31.126Z,1541181691.126 [Radio_Surface ThreadHandler](INFO): Handler Thread ID is 890
2018-11-02T18:01:31.126Z,1541181691.126 [controlThread](DEBUG): Initializing ControlThread
2018-11-02T18:01:31.127Z,1541181691.127 [DepthRateCalculator](DEBUG): Initializing DepthRateCalculator.
2018-11-02T18:01:31.127Z,1541181691.127 [PitchRateCalculator](DEBUG): Initializing PitchRateCalculator.
2018-11-02T18:01:31.128Z,1541181691.128 [SpeedCalculator](DEBUG): Initializing SpeedCalculator.
2018-11-02T18:01:31.128Z,1541181691.128 [TempGradientCalculator](DEBUG): Initializing TempGradientCalculator.
2018-11-02T18:01:31.128Z,1541181691.128 [YawRateCalculator](DEBUG): Initializing YawRateCalculator.
2018-11-02T18:01:31.129Z,1541181691.129 [ElevatorOffsetCalculator](DEBUG): Initializing ElevatorOffsetCalculator.
2018-11-02T18:01:31.135Z,1541181691.135 [SBIT](INFO): Initialize SBIT Component.
2018-11-02T18:01:31.135Z,1541181691.135 [SBIT](IMPORTANT): git: 2018-11-02
2018-11-02T18:01:31.136Z,1541181691.136 [SBIT](INFO): git hash: 766718804c5d96cf896f07eddb44b232c8585615
2018-11-02T18:01:31.136Z,1541181691.136 [SBIT](IMPORTANT): Kernel Release: 2.6.27.8
2018-11-02T18:01:31.136Z,1541181691.136 [SBIT](IMPORTANT): Kernel Version:#2 PREEMPT Thu Jan 11 20:13:48 PST 2018
2018-11-02T18:01:31.137Z,1541181691.137 [SBIT](INFO): Beginning SBIT in 36.000000 seconds.
2018-11-02T18:01:31.138Z,1541181691.138 [IBIT](INFO): Initialize IBIT Component.
2018-11-02T18:01:31.139Z,1541181691.139 [CBIT](DEBUG): Initialize CBIT Component.
2018-11-02T18:01:31.139Z,1541181691.139 [CBIT](INFO): Last reboot was NOT due to watchdog timer.
2018-11-02T18:01:31.181Z,1541181691.181 [Rowe_600LCM ThreadHandler](INFO): Handler Thread ID is 891
2018-11-02T18:01:31.182Z,1541181691.182 [Rowe_600LCM](INFO): Initializing
2018-11-02T18:01:31.183Z,1541181691.183 [Rowe_600LCM](INFO): Checking LCM
2018-11-02T18:01:31.201Z,1541181691.201 [Radio_Surface](INFO): Powering up
2018-11-02T18:01:31.314Z,1541181691.314 [WetLabsBB2FL ThreadHandler](INFO): Handler Thread ID is 892
2018-11-02T18:01:31.315Z,1541181691.315 [WetLabsBB2FL](INFO): Powering down
2018-11-02T18:01:31.341Z,1541181691.341 [VerticalControl](DEBUG): Initialize VerticalControlComponent.
2018-11-02T18:01:31.343Z,1541181691.343 [HorizontalControl](DEBUG): Initialize HorizontalControlComponent.
2018-11-02T18:01:31.344Z,1541181691.344 [SpeedControl](DEBUG): Initialize SpeedControlComponent.
2018-11-02T18:01:31.344Z,1541181691.344 [LoopControl](DEBUG): Initialize LoopControlComponent.
2018-11-02T18:01:31.345Z,1541181691.345 [DeadReckonUsingSpeedCalculator](DEBUG): Initializing DeadReckonUsingSpeedCalculator component.
2018-11-02T18:01:31.346Z,1541181691.346 [DeadReckonUsingSpeedCalculator](INFO): Will consider orientation measurement stale after 120s.
2018-11-02T18:01:31.346Z,1541181691.346 [DeadReckonUsingSpeedCalculator](INFO): Will consider velocity measurement stale after 20s.
2018-11-02T18:01:31.347Z,1541181691.347 [NavChart](DEBUG): Initialize NavChart Navigation.
2018-11-02T18:01:31.347Z,1541181691.347 [UniversalFixResidualReporter](DEBUG): Initializing UniversalFixResidualReporter component.
2018-11-02T18:01:31.365Z,1541181691.365 [MissionManager](INFO): Loading Mission: Missions/Startup.xml
2018-11-02T18:01:31.535Z,1541181691.535 [NavChartDb ThreadHandler](INFO): Handler Thread ID is 893
2018-11-02T18:01:31.604Z,1541181691.604 [NavChartDb](INFO): Looking for Electronic Nav Chart file at: Resources/ElectronicNavigationCharts/US1WC07M.000
2018-11-02T18:01:31.604Z,1541181691.604 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US1WC07M.000
2018-11-02T18:01:31.604Z,1541181691.604 [NavChartDb](INFO): Looking for Electronic Nav Chart file at: Resources/ElectronicNavigationCharts/US2WC11M.000
2018-11-02T18:01:31.604Z,1541181691.604 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US2WC11M.000
2018-11-02T18:01:31.604Z,1541181691.604 [NavChartDb](INFO): Looking for Electronic Nav Chart file at: Resources/ElectronicNavigationCharts/US3CA52M.000
2018-11-02T18:01:31.615Z,1541181691.615 [Startup:A.GoToSurface](DEBUG): Construct GoToSurface.
2018-11-02T18:01:31.605Z,1541181691.605 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US3CA52M.000
2018-11-02T18:01:31.618Z,1541181691.618 [NavChartDb](INFO): Looking for Electronic Nav Chart file at: Resources/ElectronicNavigationCharts/US4CA60M.000
2018-11-02T18:01:31.618Z,1541181691.618 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US4CA60M.000
2018-11-02T18:01:31.618Z,1541181691.618 [NavChartDb](INFO): Looking for Electronic Nav Chart file at: Resources/ElectronicNavigationCharts/US5CA50M.000
2018-11-02T18:01:31.618Z,1541181691.618 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA50M.000
2018-11-02T18:01:31.619Z,1541181691.619 [NavChartDb](INFO): Looking for Electronic Nav Chart file at: Resources/ElectronicNavigationCharts/US5CA61M.000
2018-11-02T18:01:31.619Z,1541181691.619 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA61M.000
2018-11-02T18:01:31.619Z,1541181691.619 [NavChartDb](INFO): Looking for Electronic Nav Chart file at: Resources/ElectronicNavigationCharts/US5CA62M.000
2018-11-02T18:01:31.619Z,1541181691.619 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA62M.000
2018-11-02T18:01:31.619Z,1541181691.619 [NavChartDb](INFO): Looking for Electronic Nav Chart file at: Resources/ElectronicNavigationCharts/US5CA83M.000
2018-11-02T18:01:31.620Z,1541181691.620 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA83M.000
2018-11-02T18:01:31.700Z,1541181691.700 [MissionManager](DEBUG): 
<?xml version="1.0" encoding="UTF-8"?>
<Mission xmlns="Tethys"
       xmlns:Control="Tethys/Control"
       xmlns:Guidance="Tethys/Guidance" 
       xmlns:Units="Tethys/Units"
       xmlns:Universal="Tethys/Universal"
       xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
       xsi:schemaLocation="Tethys http://okeanids.mbari.org/tethys/Xml/Tethys.xsd
                           Tethys/Control http://okeanids.mbari.org/tethys/Xml/Control.xsd
                           Tethys/Guidance http://okeanids.mbari.org/tethys/Xml/Guidance.xsd
                           Tethys/Units http://okeanids.mbari.org/tethys/Xml/Units.xsd
                           Tethys/Universal http://okeanids.mbari.org/tethys/Xml/Universal.xsd"
       Id="Startup">

    <Guidance:GoToSurface>
        <Progression/>
    </Guidance:GoToSurface>

    <Aggregate Id="StartupSatComms">

        <Sequence/>

        <ReadDatum>
            <Timeout Duration="P1M" />
            <Universal:latitude_fix/>
        </ReadDatum>

        <ReadDatum>
            <Timeout Duration="P1M" />
            <Universal:platform_communications/>
        </ReadDatum>

    </Aggregate>

</Mission>


2018-11-02T18:01:31.701Z,1541181691.701 [MissionManager](INFO): Loading Mission: Missions/Default.xml
2018-11-02T18:01:31.731Z,1541181691.731 [Rowe_600LCM](INFO): LCM OK
2018-11-02T18:01:31.731Z,1541181691.731 [Rowe_600LCM](INFO): Powering up
2018-11-02T18:01:31.791Z,1541181691.791 [MissionManager](INFO): DefineArg Default.ElapsedSinceDefaultStarted = 0.000000 min
2018-11-02T18:01:31.792Z,1541181691.792 [Default:A.Wait](DEBUG): Construct Wait.
2018-11-02T18:01:31.794Z,1541181691.794 [Default:B.GoToSurface](DEBUG): Construct GoToSurface.
2018-11-02T18:01:31.818Z,1541181691.818 [Default:CheckIn:Read_Iridium:A_Timeout:A.Execute](DEBUG): Construct Execute.
2018-11-02T18:01:31.846Z,1541181691.846 [Default:CheckIn:C.Wait](DEBUG): Construct Wait.
2018-11-02T18:01:31.852Z,1541181691.852 [Default:E.Execute](DEBUG): Construct Execute.
2018-11-02T18:01:31.880Z,1541181691.880 [MissionManager](DEBUG): 
<?xml version="1.0" encoding="UTF-8"?>
<Mission xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
         xmlns="Tethys"
         xmlns:Units="Tethys/Units"
         xmlns:Guidance="Tethys/Guidance"
         xmlns:Universal="Tethys/Universal"
         xsi:schemaLocation="Tethys http://okeanids.mbari.org/tethys/Xml/Tethys.xsd
                             Tethys/Units http://okeanids.mbari.org/tethys/Xml/Units.xsd
                             Tethys/Guidance http://okeanids.mbari.org/tethys/Xml/Guidance.xsd
                             Tethys/Universal http://okeanids.mbari.org/tethys/Xml/Universal.xsd"
         Id="Default">

    <DefineArg Name="ElapsedSinceDefaultStarted"><Units:minute/><Value>0</Value></DefineArg>

    <Guidance:Wait>
        <Description>
            Wait a moment to see if the scheduler starts a new mission before
            starting to actually run Default.
        </Description>
        <Sequence/>
        <Setting><Guidance:Wait.duration/><Units:second/><Value>13</Value></Setting>
    </Guidance:Wait>

    <Guidance:GoToSurface>
        <Progression/>
    </Guidance:GoToSurface>

    <Aggregate Id="CheckIn">

        <Sequence Repeat="288"/>

        <ReadDatum Id="Read_GPS">
            <Timeout Duration="P5M"/>
            <Universal:time_fix/>
        </ReadDatum>

        <ReadDatum Id="Read_Iridium">
            <Timeout Duration="P2H">
                <Guidance:Execute>
                    <Sequence/>
                    <Setting><Guidance:Execute.command/><String>Burn on</String></Setting>
                </Guidance:Execute>
                <Syslog Severity="Critical">Dropped weight due to communications timeout.</Syslog>
            </Timeout>
            <Universal:platform_communications/>
        </ReadDatum>

        <Guidance:Wait>
            <Sequence/>
            <Setting><Guidance:Wait.duration/><Units:minute/><Value>5</Value></Setting>
        </Guidance:Wait>

        <Assign><Sequence/><Arg Name="ElapsedSinceDefaultStarted"/><Elapsed><Universal:mission_started/></Elapsed></Assign>

        <Syslog Severity="Important">Default mission has been running for <Arg Name="ElapsedSinceDefaultStarted"/><Units:minute/></Syslog>

    </Aggregate>

    <Syslog Severity="Important">Restarting logs and Default mission.</Syslog>

    <Guidance:Execute>
        <Sequence/>
        <Setting><Guidance:Execute.command/><String>restart logs</String></Setting>
    </Guidance:Execute>

</Mission>


2018-11-02T18:01:31.884Z,1541181691.884 [controlThread](DEBUG): Component order: CycleStarter,DataOverHttps,Depth_Keller,DropWeight,NAL9602,Onboard,PNI_TCM,Aanderaa_O2,PAR_Licor,Depth_Keller,PAR_Licor,DepthRateCalculator,PitchRateCalculator,SpeedCalculator,TempGradientCalculator,YawRateCalculator,ElevatorOffsetCalculator,DeadReckonUsingSpeedCalculator,NavChart,UniversalFixResidualReporter,MissionManager,VerticalControl,HorizontalControl,SpeedControl,LoopControl,BuoyancyServo,ElevatorServo,MassServo,RudderServo,ThrusterServo,SBIT,IBIT,CBIT,Reporter,LogSplitter,
2018-11-02T18:01:31.901Z,1541181691.901 [DataOverHttps](DEBUG): dashIP=134.89.2.23 starts with a digit so assuming it is a numeric IP
2018-11-02T18:01:31.914Z,1541181691.914 [Depth_Keller](ERROR): Pressure reading out of range: 1831.023193 decibar
2018-11-02T18:01:32.139Z,1541181692.139 [DepthRateCalculator](ERROR): Depth measurement is not active
2018-11-02T18:01:32.422Z,1541181692.422 [BuoyancyServo](DEBUG): Initializing EZServoServo.
2018-11-02T18:01:32.429Z,1541181692.429 [BuoyancyServo](DEBUG): Initializing BuoyancyServo.
2018-11-02T18:01:32.451Z,1541181692.451 [ElevatorServo](DEBUG): Initializing EZServoServo.
2018-11-02T18:01:32.457Z,1541181692.457 [ElevatorServo](DEBUG): Initializing ElevatorServo.
2018-11-02T18:01:32.467Z,1541181692.467 [MassServo](DEBUG): Initializing EZServoServo.
2018-11-02T18:01:32.473Z,1541181692.473 [MassServo](DEBUG): Initializing MassServo.
2018-11-02T18:01:32.491Z,1541181692.491 [RudderServo](DEBUG): Initializing EZServoServo.
2018-11-02T18:01:32.497Z,1541181692.497 [RudderServo](DEBUG): Initializing RudderServo.
2018-11-02T18:01:32.511Z,1541181692.511 [ThrusterServo](DEBUG): Initializing EZServoServo.
2018-11-02T18:01:32.517Z,1541181692.517 [ThrusterServo](DEBUG): Initializing ThrusterServo.
2018-11-02T18:01:33.385Z,1541181693.385 [BuoyancyServo](ERROR): Buoyancy initialization uart error serial timeout
2018-11-02T18:01:33.385Z,1541181693.385 [BuoyancyServo](FAULT): Buoyancy failed to initialize
2018-11-02T18:01:33.385Z,1541181693.385 [BuoyancyServo] Communications Fault, FailCount= 1
2018-11-02T18:01:33.385Z,1541181693.385 [BuoyancyServo](ERROR): Communications Fault
2018-11-02T18:01:33.593Z,1541181693.593 [CBIT](ERROR): Communications Fault in component: BuoyancyServo
2018-11-02T18:01:33.645Z,1541181693.645 [BuoyancyServo](DEBUG): Uninitialize Buoyancy Servo.
2018-11-02T18:01:33.646Z,1541181693.646 [BuoyancyServo](INFO): Powering down
2018-11-02T18:01:35.357Z,1541181695.357 [Aanderaa_O2](INFO): Powering down
2018-11-02T18:01:35.634Z,1541181695.634 [Rowe_600LCM](INFO): Stopping potential previous instance(s) of Rowe LCM interface
2018-11-02T18:01:35.812Z,1541181695.812 [Rowe_600LCM](INFO): Started Rowe LCM interface with command:nohup ./lrauv-framework/onboard/bin/roweadcp -ldir /mnt/mmc/LRAUV/Logs/latest/ -dev /dev/ttyB4 -b 9600 >& /dev/null &
2018-11-02T18:01:35.870Z,1541181695.870 [CBIT](INFO): Clearing failed state for component BuoyancyServo
2018-11-02T18:01:35.870Z,1541181695.870 [BuoyancyServo] No Fault, FailCount= 1
2018-11-02T18:01:35.951Z,1541181695.951 [Rowe_600LCM](INFO): LCM subscribed to channel:Rowe_600LCM.adcp_dvl.bottom_track
2018-11-02T18:01:35.952Z,1541181695.952 [Rowe_600LCM](INFO): LCM subscribed to channel:Rowe_600LCM.adcp_dvl.vehicle_water_velocity
2018-11-02T18:01:35.953Z,1541181695.953 [Rowe_600LCM](INFO): LCM subscribed to channel:rowe_dvl.rowe
2018-11-02T18:01:36.111Z,1541181696.111 [BuoyancyServo](DEBUG): Initializing EZServoServo.
2018-11-02T18:01:36.111Z,1541181696.111 [BuoyancyServo](DEBUG): Initializing BuoyancyServo.
2018-11-02T18:01:50.534Z,1541181710.534 [CommandLine](IMPORTANT): got command failComponent
2018-11-02T18:01:50.534Z,1541181710.534 [CommandLine](IMPORTANT): Failed components:
2018-11-02T18:01:50.534Z,1541181710.534 [CommandLine](IMPORTANT): No failed Components.
2018-11-02T18:01:59.414Z,1541181719.414 [CommandLine](IMPORTANT): got command failComponent
2018-11-02T18:01:59.414Z,1541181719.414 [CommandLine](IMPORTANT): Failed components:
2018-11-02T18:01:59.414Z,1541181719.414 [CommandLine](IMPORTANT): No failed Components.
2018-11-02T18:02:00.007Z,1541181720.007 [NAL9602](INFO): Powering up NAL9602
2018-11-02T18:02:04.455Z,1541181724.455 [CommandLine](IMPORTANT): got command failComponent
2018-11-02T18:02:04.455Z,1541181724.455 [CommandLine](IMPORTANT): Failed components:
2018-11-02T18:02:04.455Z,1541181724.455 [CommandLine](IMPORTANT): No failed Components.
2018-11-02T18:02:07.733Z,1541181727.733 [SBIT](IMPORTANT): Beginning Startup BIT
2018-11-02T18:02:07.737Z,1541181727.737 [CBIT](IMPORTANT): Beginning ground fault scan
2018-11-02T18:02:10.955Z,1541181730.955 [NAL9602](INFO): NAL9602 initialized
2018-11-02T18:02:18.768Z,1541181738.768 [CBIT](IMPORTANT): No ground fault detected
mA:
CHAN A0 (Batt): -0.004804
CHAN A1 (24V): -0.009215
CHAN A2 (12V): -0.002067
CHAN A3 (5V): -0.001400
CHAN B0 (3.3V): -0.000321
CHAN B1 (3.15aV): -0.000225
CHAN B2 (3.15bV): 0.000055
CHAN B3 (GND): 0.000491
OPEN: -0.000392
Full Scale Calc: 4.765 mA, -1.589 mA
2018-11-02T18:02:34.386Z,1541181754.386 [CommandLine](IMPORTANT): got command failComponent
2018-11-02T18:02:34.387Z,1541181754.387 [CommandLine](IMPORTANT): Failed components:
2018-11-02T18:02:34.387Z,1541181754.387 [CommandLine](IMPORTANT): No failed Components.
2018-11-02T18:03:00.283Z,1541181780.283 [CommandLine](IMPORTANT): got command configSet list
2018-11-02T18:03:00.283Z,1541181780.283 [CommandLine](IMPORTANT): Listing configuration overrides from Data/persisted.cfg
2018-11-02T18:03:00.284Z,1541181780.284 [CommandLine](IMPORTANT): BPC1.batteryMissingStickThreshold=25 count;

2018-11-02T18:03:00.284Z,1541181780.284 [CommandLine](IMPORTANT): BPC1.batteryMuxCycleTime=10 minute;

2018-11-02T18:03:00.284Z,1541181780.284 [CommandLine](IMPORTANT): BPC1.batterySamplingInterval=1 minute;

2018-11-02T18:03:00.284Z,1541181780.284 [CommandLine](IMPORTANT): BPC1.loadAtStartup=0 bool;

2018-11-02T18:03:00.284Z,1541181780.284 [CommandLine](IMPORTANT): CTD_NeilBrown.loadAtStartup=0 bool;

2018-11-02T18:03:00.284Z,1541181780.284 [CommandLine](IMPORTANT): CTD_Seabird.loadAtStartup=0 bool;

2018-11-02T18:03:00.284Z,1541181780.284 [CommandLine](IMPORTANT): Express none VerticalTemperatureHomogeneityIndexCalculator.vertical_temperature_homogeneity_index;

2018-11-02T18:03:00.285Z,1541181780.285 [CommandLine](IMPORTANT): Express linearApproximation height_above_sea_floor 5.000000 meter;

2018-11-02T18:03:00.285Z,1541181780.285 [CommandLine](IMPORTANT): Rowe_600LCM.loadAtStartup=1 bool;

2018-11-02T18:03:00.285Z,1541181780.285 [CommandLine](IMPORTANT): StratificationFrontDetector.loadAtStartup=0 bool;

2018-11-02T18:03:00.285Z,1541181780.285 [CommandLine](IMPORTANT): VerticalControl.buoyancyNeutral=213 cubic_centimeter;

2018-11-02T18:03:00.285Z,1541181780.285 [CommandLine](IMPORTANT): VerticalControl.massDefault=4 millimeter;

2018-11-02T18:03:01.815Z,1541181781.815 [SBIT](IMPORTANT): SBIT PASSED
2018-11-02T18:03:01.897Z,1541181781.897 [CommandLine](IMPORTANT): got command configSet list
2018-11-02T18:03:01.897Z,1541181781.897 [CommandLine](IMPORTANT): Listing configuration overrides from Data/persisted.cfg
2018-11-02T18:03:01.898Z,1541181781.898 [CommandLine](IMPORTANT): BPC1.batteryMissingStickThreshold=25 count;

2018-11-02T18:03:01.898Z,1541181781.898 [CommandLine](IMPORTANT): BPC1.batteryMuxCycleTime=10 minute;

2018-11-02T18:03:01.898Z,1541181781.898 [CommandLine](IMPORTANT): BPC1.batterySamplingInterval=1 minute;

2018-11-02T18:03:01.898Z,1541181781.898 [CommandLine](IMPORTANT): BPC1.loadAtStartup=0 bool;

2018-11-02T18:03:01.899Z,1541181781.899 [CommandLine](IMPORTANT): CTD_NeilBrown.loadAtStartup=0 bool;

2018-11-02T18:03:01.899Z,1541181781.899 [CommandLine](IMPORTANT): CTD_Seabird.loadAtStartup=0 bool;

2018-11-02T18:03:01.899Z,1541181781.899 [CommandLine](IMPORTANT): Express none VerticalTemperatureHomogeneityIndexCalculator.vertical_temperature_homogeneity_index;

2018-11-02T18:03:01.899Z,1541181781.899 [CommandLine](IMPORTANT): Express linearApproximation height_above_sea_floor 5.000000 meter;

2018-11-02T18:03:01.899Z,1541181781.899 [CommandLine](IMPORTANT): Rowe_600LCM.loadAtStartup=1 bool;

2018-11-02T18:03:01.899Z,1541181781.899 [CommandLine](IMPORTANT): StratificationFrontDetector.loadAtStartup=0 bool;

2018-11-02T18:03:01.899Z,1541181781.899 [CommandLine](IMPORTANT): VerticalControl.buoyancyNeutral=213 cubic_centimeter;

2018-11-02T18:03:01.899Z,1541181781.899 [CommandLine](IMPORTANT): VerticalControl.massDefault=4 millimeter;

2018-11-02T18:03:02.186Z,1541181782.186 [MissionManager](IMPORTANT): Started mission Startup
2018-11-02T18:03:02.187Z,1541181782.187 [Startup] Running Loop=1
2018-11-02T18:03:02.187Z,1541181782.187 [Startup](DEBUG): Aggregate::initialize Startup
2018-11-02T18:03:02.187Z,1541181782.187 [Startup:A.GoToSurface] Running Loop=1
2018-11-02T18:03:02.187Z,1541181782.187 [Startup:A.GoToSurface](DEBUG): Initialize GoToSurfaceComponent.
2018-11-02T18:03:02.188Z,1541181782.188 [Startup:A.GoToSurface](DEBUG): No depth rate setting specified. Using default value of nan m/s.
2018-11-02T18:03:02.188Z,1541181782.188 [Startup:A.GoToSurface](DEBUG): No pitch setting specified. Using default value of nan degrees.
2018-11-02T18:03:02.189Z,1541181782.189 [Startup:A.GoToSurface](DEBUG): No speed setting specified. Using default value of 1.000000 m/s.
2018-11-02T18:03:02.190Z,1541181782.190 [Startup:A.GoToSurface](DEBUG): No surface timeout specified. Using default value of 1000.000000 seconds.
2018-11-02T18:03:02.190Z,1541181782.190 [Startup:A.GoToSurface](INFO): Received pitch timeout configuration 60.000000 seconds.
2018-11-02T18:03:02.196Z,1541181782.196 [Startup:StartupSatComms] Running Loop=1
2018-11-02T18:03:02.196Z,1541181782.196 [Startup:StartupSatComms](DEBUG): Aggregate::initialize Startup:StartupSatComms
2018-11-02T18:03:02.196Z,1541181782.196 [Startup:StartupSatComms:A] Running Loop=1
2018-11-02T18:03:02.598Z,1541181782.598 [Startup:StartupSatComms:A](DEBUG): Initialize ReadDataComponent to sense latitude_fix
2018-11-02T18:03:30.467Z,1541181810.467 [CommandLine](IMPORTANT): got command configSet BPC1.batteryMissingStickThreshold 28.000000 count persist
2018-11-02T18:03:54.944Z,1541181834.944 [NAL9602](INFO): SBD MO Status=2, MOMSN=10405, MT Status=2, MTMSN=0
2018-11-02T18:03:54.944Z,1541181834.944 [NAL9602](ERROR): Failed to initiate SBD session. Error code: 2
2018-11-02T18:04:05.339Z,1541181845.339 [Startup:StartupSatComms:A](INFO): Timed out from 2018-11-02T18:03:02.2Z
2018-11-02T18:04:05.340Z,1541181845.340 [Startup:StartupSatComms:A] Stopped
2018-11-02T18:04:05.340Z,1541181845.340 [Startup:StartupSatComms:B] Running Loop=1
2018-11-02T18:04:05.492Z,1541181845.492 [Startup:StartupSatComms:B](DEBUG): Initialize ReadDataComponent to sense platform_communications
2018-11-02T18:04:06.163Z,1541181846.163 [DataOverHttps](INFO): setting available, lastComms_.elapsed()=0.003828
2018-11-02T18:04:11.014Z,1541181851.014 [DataOverHttps](INFO): Sending 18 bytes from file Logs/20181102T173155/Courier0007.lzma
2018-11-02T18:04:11.807Z,1541181851.807 [DataOverHttps](INFO): Moved sent file to Logs/20181102T173155/Courier0007.lzma.bak
2018-11-02T18:04:11.807Z,1541181851.807 [DataOverHttps](INFO): SBD MOMSN=8781998
2018-11-02T18:04:12.412Z,1541181852.412 [NAL9602](INFO): SBD MO Status=2, MOMSN=10405, MT Status=2, MTMSN=0
2018-11-02T18:04:12.412Z,1541181852.412 [NAL9602](ERROR): Failed to initiate SBD session. Error code: 2
2018-11-02T18:04:14.314Z,1541181854.314 [CommandLine](IMPORTANT): got command configSet CTD_NeilBrown.loadAtStartup 1.000000 bool persist
2018-11-02T18:04:14.314Z,1541181854.314 [CommandLine](IMPORTANT): configSet CTD_NeilBrown.loadAtStartup requires a restart to take effect.
2018-11-02T18:04:21.614Z,1541181861.614 [DataOverHttps](INFO): Sending 118 bytes from file Logs/20181102T175137/Courier0000.lzma
2018-11-02T18:04:22.379Z,1541181862.379 [DataOverHttps](INFO): Moved sent file to Logs/20181102T175137/Courier0000.lzma.bak
2018-11-02T18:04:22.379Z,1541181862.379 [DataOverHttps](INFO): SBD MOMSN=8782000
2018-11-02T18:04:23.970Z,1541181863.970 [CommandLine](IMPORTANT): got command configSet list
2018-11-02T18:04:23.970Z,1541181863.970 [CommandLine](IMPORTANT): Listing configuration overrides from Data/persisted.cfg
2018-11-02T18:04:23.971Z,1541181863.971 [CommandLine](IMPORTANT): BPC1.batteryMissingStickThreshold=28 count;

2018-11-02T18:04:23.971Z,1541181863.971 [CommandLine](IMPORTANT): BPC1.batteryMuxCycleTime=10 minute;

2018-11-02T18:04:23.971Z,1541181863.971 [CommandLine](IMPORTANT): BPC1.batterySamplingInterval=1 minute;

2018-11-02T18:04:23.971Z,1541181863.971 [CommandLine](IMPORTANT): BPC1.loadAtStartup=0 bool;

2018-11-02T18:04:23.971Z,1541181863.971 [CommandLine](IMPORTANT): CTD_NeilBrown.loadAtStartup=1 bool;

2018-11-02T18:04:23.971Z,1541181863.971 [CommandLine](IMPORTANT): CTD_Seabird.loadAtStartup=0 bool;

2018-11-02T18:04:23.971Z,1541181863.971 [CommandLine](IMPORTANT): Express none VerticalTemperatureHomogeneityIndexCalculator.vertical_temperature_homogeneity_index;

2018-11-02T18:04:23.972Z,1541181863.972 [CommandLine](IMPORTANT): Express linearApproximation height_above_sea_floor 5.000000 meter;

2018-11-02T18:04:23.972Z,1541181863.972 [CommandLine](IMPORTANT): Rowe_600LCM.loadAtStartup=1 bool;

2018-11-02T18:04:23.972Z,1541181863.972 [CommandLine](IMPORTANT): StratificationFrontDetector.loadAtStartup=0 bool;

2018-11-02T18:04:23.972Z,1541181863.972 [CommandLine](IMPORTANT): VerticalControl.buoyancyNeutral=213 cubic_centimeter;

2018-11-02T18:04:23.972Z,1541181863.972 [CommandLine](IMPORTANT): VerticalControl.massDefault=4 millimeter;

2018-11-02T18:04:32.621Z,1541181872.621 [DeadReckonUsingSpeedCalculator](ERROR): Will not write estimated position: latitudeAccuracy_ = nan, longitudeAccuracy_ = nan, depthAccuracy_ = nan
2018-11-02T18:04:32.621Z,1541181872.621 [DeadReckonUsingSpeedCalculator] Software Fault, FailCount= 1
2018-11-02T18:04:32.622Z,1541181872.622 [DeadReckonUsingSpeedCalculator](ERROR): Software Fault
2018-11-02T18:04:32.690Z,1541181872.690 [CBIT](ERROR): Software Fault in component: DeadReckonUsingSpeedCalculator
2018-11-02T18:04:32.700Z,1541181872.700 [DataOverHttps](INFO): Sending 18 bytes from file Logs/20181102T175137/Courier0004.lzma
2018-11-02T18:04:32.815Z,1541181872.815 [CBIT](INFO): Clearing failed state for component DeadReckonUsingSpeedCalculator
2018-11-02T18:04:32.815Z,1541181872.815 [DeadReckonUsingSpeedCalculator] No Fault, FailCount= 1
2018-11-02T18:04:33.158Z,1541181873.158 [DeadReckonUsingSpeedCalculator](DEBUG): Initializing DeadReckonUsingSpeedCalculator component.
2018-11-02T18:04:33.158Z,1541181873.158 [DeadReckonUsingSpeedCalculator](INFO): Will consider orientation measurement stale after 120s.
2018-11-02T18:04:33.159Z,1541181873.159 [DeadReckonUsingSpeedCalculator](INFO): Will consider velocity measurement stale after 20s.
2018-11-02T18:04:33.499Z,1541181873.499 [DataOverHttps](INFO): Moved sent file to Logs/20181102T175137/Courier0004.lzma.bak
2018-11-02T18:04:33.499Z,1541181873.499 [DataOverHttps](INFO): SBD MOMSN=8782005
2018-11-02T18:04:37.573Z,1541181877.573 [Rowe_600LCM](FAULT): Did not receive valid device response within the specified allowable sample time.
2018-11-02T18:04:37.573Z,1541181877.573 [Rowe_600LCM] Communications Fault, FailCount= 1
2018-11-02T18:04:37.573Z,1541181877.573 [Rowe_600LCM](ERROR): Communications Fault
2018-11-02T18:04:37.915Z,1541181877.915 [CBIT](ERROR): Communications Fault in component: Rowe_600LCM
2018-11-02T18:04:37.977Z,1541181877.977 [Rowe_600LCM](INFO): Stopping potential previous instance(s) of roweadcp LCM interface
2018-11-02T18:04:38.226Z,1541181878.226 [Rowe_600LCM](INFO): Powering down
2018-11-02T18:04:39.033Z,1541181879.033 [Rowe_600LCM](FAULT): LCB fault:  Software Overcurrent.
2018-11-02T18:04:39.033Z,1541181879.033 [Rowe_600LCM] Hardware Fault, FailCount= 1
2018-11-02T18:04:39.033Z,1541181879.033 [Rowe_600LCM](ERROR): Hardware Fault
2018-11-02T18:04:39.589Z,1541181879.589 [CBIT](INFO): Clearing failed state for component Rowe_600LCM
2018-11-02T18:04:39.589Z,1541181879.589 [Rowe_600LCM] No Fault, FailCount= 1
2018-11-02T18:04:39.841Z,1541181879.841 [Rowe_600LCM](INFO): Initializing
2018-11-02T18:04:39.841Z,1541181879.841 [Rowe_600LCM](INFO): Checking LCM
2018-11-02T18:04:39.842Z,1541181879.842 [Rowe_600LCM](INFO): LCM OK
2018-11-02T18:04:39.842Z,1541181879.842 [Rowe_600LCM](INFO): Powering up
2018-11-02T18:04:42.886Z,1541181882.886 [NAL9602](INFO): SBD MO Status=2, MOMSN=10405, MT Status=2, MTMSN=0
2018-11-02T18:04:42.886Z,1541181882.886 [NAL9602](ERROR): Failed to initiate SBD session. Error code: 2
2018-11-02T18:04:43.022Z,1541181883.022 [DataOverHttps](INFO): Sending 118 bytes from file Logs/20181102T175718/Courier0000.lzma
2018-11-02T18:04:43.811Z,1541181883.811 [DataOverHttps](INFO): Moved sent file to Logs/20181102T175718/Courier0000.lzma.bak
2018-11-02T18:04:43.811Z,1541181883.811 [DataOverHttps](INFO): SBD MOMSN=8782007
2018-11-02T18:04:44.037Z,1541181884.037 [Rowe_600LCM](INFO): Stopping potential previous instance(s) of Rowe LCM interface
2018-11-02T18:04:44.122Z,1541181884.122 [Rowe_600LCM](INFO): Started Rowe LCM interface with command:nohup ./lrauv-framework/onboard/bin/roweadcp -ldir /mnt/mmc/LRAUV/Logs/latest/ -dev /dev/ttyB4 -b 9600 >& /dev/null &
2018-11-02T18:04:44.123Z,1541181884.123 [Rowe_600LCM](INFO): LCM subscribed to channel:Rowe_600LCM.adcp_dvl.bottom_track
2018-11-02T18:04:44.123Z,1541181884.123 [Rowe_600LCM](INFO): LCM subscribed to channel:Rowe_600LCM.adcp_dvl.vehicle_water_velocity
2018-11-02T18:04:44.124Z,1541181884.124 [Rowe_600LCM](INFO): LCM subscribed to channel:rowe_dvl.rowe
2018-11-02T18:04:48.771Z,1541181888.771 [CommandLine](IMPORTANT): got command configSet CTD_Seabird.loadAtStartup 1.000000 bool persist
2018-11-02T18:04:48.771Z,1541181888.771 [CommandLine](IMPORTANT): configSet CTD_Seabird.loadAtStartup requires a restart to take effect.
2018-11-02T18:04:54.900Z,1541181894.900 [DataOverHttps](INFO): Sending 319 bytes from file Logs/20181102T175718/Courier0004.lzma
2018-11-02T18:04:55.695Z,1541181895.695 [DataOverHttps](INFO): Moved sent file to Logs/20181102T175718/Courier0004.lzma.bak
2018-11-02T18:04:55.695Z,1541181895.695 [DataOverHttps](INFO): SBD MOMSN=8782012
2018-11-02T18:04:56.027Z,1541181896.027 [CommandLine](IMPORTANT): got command restart application
2018-11-02T18:04:57.029Z,1541181897.029 [Supervisor](INFO): Stop Mission called by Supervisor::terminate
2018-11-02T18:04:57.032Z,1541181897.032 [CommandLine ThreadHandler](INFO): Uninitializing protected caller thread.
2018-11-02T18:04:57.033Z,1541181897.033 [CommandLine ThreadHandler](INFO): Thread cancelled.
2018-11-02T18:04:57.173Z,1541181897.173 [Supervisor](DEBUG): Uninitializing supervisor and starting cleanup.  Bye!
2018-11-02T18:04:57.173Z,1541181897.173 [CommandLine ThreadHandler](INFO): Thread cancelled.
2018-11-02T18:04:57.174Z,1541181897.174 [CommandLine](INFO): Join timeout helper Thread ID is 924
2018-11-02T18:04:57.189Z,1541181897.189 [ComponentRegistry](INFO): Shutting down NavChartDb ThreadHandler
2018-11-02T18:04:57.189Z,1541181897.189 [NavChartDb ThreadHandler](INFO): Thread cancelled.
2018-11-02T18:04:57.189Z,1541181897.189 [NavChartDb](INFO): Join timeout helper Thread ID is 925
2018-11-02T18:04:57.478Z,1541181897.478 [NavChartDb ThreadHandler](INFO): Uninitializing protected caller thread.
2018-11-02T18:04:57.478Z,1541181897.478 [NavChartDb ThreadHandler](INFO): Thread cancelled.
2018-11-02T18:04:57.497Z,1541181897.497 [ComponentRegistry](INFO): Shutting down WetLabsBB2FL ThreadHandler
2018-11-02T18:04:57.497Z,1541181897.497 [WetLabsBB2FL ThreadHandler](INFO): Thread cancelled.
2018-11-02T18:04:57.497Z,1541181897.497 [WetLabsBB2FL](INFO): Join timeout helper Thread ID is 926
2018-11-02T18:04:57.561Z,1541181897.561 [WetLabsBB2FL ThreadHandler](INFO): Uninitializing protected caller thread.
2018-11-02T18:04:57.561Z,1541181897.561 [WetLabsBB2FL](INFO): Powering down
2018-11-02T18:04:57.562Z,1541181897.562 [WetLabsBB2FL ThreadHandler](INFO): Thread cancelled.
2018-11-02T18:04:57.577Z,1541181897.577 [ComponentRegistry](INFO): Shutting down Rowe_600LCM ThreadHandler
2018-11-02T18:04:57.577Z,1541181897.577 [Rowe_600LCM ThreadHandler](INFO): Thread cancelled.
2018-11-02T18:04:57.577Z,1541181897.577 [Rowe_600LCM](INFO): Join timeout helper Thread ID is 927
2018-11-02T18:04:57.669Z,1541181897.669 [Rowe_600LCM ThreadHandler](INFO): Uninitializing protected caller thread.
2018-11-02T18:04:57.670Z,1541181897.670 [Rowe_600LCM](INFO): Stopping potential previous instance(s) of roweadcp LCM interface
2018-11-02T18:04:57.833Z,1541181897.833 [Rowe_600LCM](INFO): Powering down
2018-11-02T18:04:57.835Z,1541181897.835 [Rowe_600LCM ThreadHandler](INFO): Thread cancelled.
2018-11-02T18:04:57.849Z,1541181897.849 [ComponentRegistry](INFO): Shutting down Radio_Surface ThreadHandler
2018-11-02T18:04:57.849Z,1541181897.849 [Radio_Surface ThreadHandler](INFO): Thread cancelled.
2018-11-02T18:04:57.849Z,1541181897.849 [Radio_Surface](INFO): Join timeout helper Thread ID is 929
2018-11-02T18:04:58.213Z,1541181898.213 [Radio_Surface ThreadHandler](INFO): Uninitializing protected caller thread.
2018-11-02T18:04:58.213Z,1541181898.213 [Radio_Surface ThreadHandler](INFO): Thread cancelled.
2018-11-02T18:04:58.226Z,1541181898.226 [ComponentRegistry](INFO): Shutting down logger ThreadHandler
2018-11-02T18:04:58.226Z,1541181898.226 [logger ThreadHandler](INFO): Thread cancelled.
2018-11-02T18:04:58.226Z,1541181898.226 [logger](INFO): Join timeout helper Thread ID is 930
2018-11-02T18:04:58.229Z,1541181898.229 [logger ThreadHandler](INFO): Uninitializing protected caller thread.
2018-11-02T18:04:58.229Z,1541181898.229 [logger ThreadHandler](INFO): Thread cancelled.
2018-11-02T18:04:58.242Z,1541181898.242 [ComponentRegistry](INFO): Shutting down CommandLine ThreadHandler
2018-11-02T18:04:58.242Z,1541181898.242 [CommandLine ThreadHandler](INFO): Thread cancelled.
2018-11-02T18:04:58.242Z,1541181898.242 [ComponentRegistry](INFO): Shutting down controlThread ThreadHandler
2018-11-02T18:04:58.242Z,1541181898.242 [controlThread ThreadHandler](INFO): Thread cancelled.
2018-11-02T18:04:58.243Z,1541181898.243 [controlThread](INFO): Join timeout helper Thread ID is 931
2018-11-02T18:04:59.753Z,1541181899.753 [controlThread ThreadHandler](INFO): Uninitializing protected caller thread.
2018-11-02T18:04:59.753Z,1541181899.753 [controlThread](DEBUG): Uninitializing ControlThread
2018-11-02T18:04:59.757Z,1541181899.757 [NAL9602](INFO): Powering down
2018-11-02T18:04:59.759Z,1541181899.759 [PNI_TCM](INFO): Powering down
2018-11-02T18:04:59.845Z,1541181899.845 [Aanderaa_O2](INFO): Powering down
2018-11-02T18:04:59.847Z,1541181899.847 [DepthRateCalculator](DEBUG): Initializing DepthRateCalculator.
2018-11-02T18:04:59.847Z,1541181899.847 [ElevatorOffsetCalculator](DEBUG): Uninitializing ElevatorOffsetCalculator.
2018-11-02T18:04:59.848Z,1541181899.848 [NavChart](DEBUG): Uninitialize NavChart Navigation.
2018-11-02T18:04:59.848Z,1541181899.848 [MissionManager](INFO): Uninitializing Mission Default
2018-11-02T18:04:59.851Z,1541181899.851 [MissionManager](INFO): Uninitializing Mission Startup
2018-11-02T18:04:59.851Z,1541181899.851 [Startup] Stopped
2018-11-02T18:04:59.851Z,1541181899.851 [Startup](DEBUG): Aggregate::uninitialize Startup
2018-11-02T18:04:59.852Z,1541181899.852 [Startup:A.GoToSurface] Stopped
2018-11-02T18:04:59.852Z,1541181899.852 [Startup:A.GoToSurface](DEBUG): Uninitialize GoToSurfaceComponent.
2018-11-02T18:04:59.852Z,1541181899.852 [Startup:StartupSatComms] Stopped
2018-11-02T18:04:59.852Z,1541181899.852 [Startup:StartupSatComms](DEBUG): Aggregate::uninitialize Startup:StartupSatComms
2018-11-02T18:04:59.852Z,1541181899.852 [Startup:StartupSatComms:B] Stopped
2018-11-02T18:04:59.854Z,1541181899.854 [VerticalControl](DEBUG): Uninitialize VerticalControlComponent.
2018-11-02T18:04:59.854Z,1541181899.854 [HorizontalControl](DEBUG): Uninitialize HorizontalControlComponent.
2018-11-02T18:04:59.855Z,1541181899.855 [SpeedControl](DEBUG): Uninitialize SpeedControlComponent.
2018-11-02T18:04:59.855Z,1541181899.855 [LoopControl](DEBUG): Uninitialize LoopControlComponent.
2018-11-02T18:04:59.855Z,1541181899.855 [BuoyancyServo](DEBUG): Uninitialize Buoyancy Servo.
2018-11-02T18:04:59.855Z,1541181899.855 [BuoyancyServo](INFO): Powering down
2018-11-02T18:04:59.869Z,1541181899.869 [ElevatorServo](DEBUG): Uninitialize Elevator Servo.
2018-11-02T18:04:59.869Z,1541181899.869 [ElevatorServo](INFO): Powering down
2018-11-02T18:04:59.870Z,1541181899.870 [MassServo](DEBUG): Uninitialize Mass Servo.
2018-11-02T18:04:59.870Z,1541181899.870 [MassServo](INFO): Powering down
2018-11-02T18:04:59.871Z,1541181899.871 [RudderServo](DEBUG): Uninitialize Rudder Servo.
2018-11-02T18:04:59.871Z,1541181899.871 [RudderServo](INFO): Powering down
2018-11-02T18:04:59.872Z,1541181899.872 [ThrusterServo](DEBUG): Uninitialize Thruster Servo.
2018-11-02T18:04:59.872Z,1541181899.872 [ThrusterServo](INFO): Powering down
2018-11-02T18:04:59.873Z,1541181899.873 [SBIT](DEBUG): Uninitialize SBIT Component.
2018-11-02T18:04:59.873Z,1541181899.873 [IBIT](DEBUG): Uninitialize IBIT Component.
2018-11-02T18:04:59.873Z,1541181899.873 [CBIT](DEBUG): Uninitialize CBIT Component.
2018-11-02T18:04:59.874Z,1541181899.874 [controlThread ThreadHandler](INFO): Thread cancelled.
2018-11-02T18:04:59.944Z,1541181899.944 [Rowe_600LCM ThreadHandler](INFO): Thread cancelled.
2018-11-02T18:04:59.950Z,1541181899.950 [Radio_Surface ThreadHandler](INFO): Thread cancelled.
2018-11-02T18:04:59.989Z,1541181899.989 [WetLabsBB2FL ThreadHandler](INFO): Thread cancelled.
2018-11-02T18:05:00.016Z,1541181900.016 [NavChartDb ThreadHandler](INFO): Thread cancelled.
2018-11-02T18:05:00.065Z,1541181900.065 [logger ThreadHandler](INFO): Thread cancelled.