2018-08-20T16:49:33.618Z,1534783773.618 [Supervisor](DEBUG): Initializing supervisor.
2018-08-20T16:49:33.621Z,1534783773.621 [SyncHandler](DEBUG): Created PCaller Thread at 404514E0
2018-08-20T16:49:33.622Z,1534783773.622 [SyncHandler](INFO): Protected caller Thread ID is 1272
2018-08-20T16:49:33.622Z,1534783773.622 [ComponentRegistry](DEBUG): Component "controlThread" handled in its own thread.
2018-08-20T16:49:33.623Z,1534783773.623 [controlThread ThreadHandler](DEBUG): Created PCaller Thread at 404814E0
2018-08-20T16:49:33.623Z,1534783773.623 [controlThread ThreadHandler](INFO): Protected caller Thread ID is 1273
2018-08-20T16:49:33.627Z,1534783773.627 [ComponentRegistry](DEBUG): SyncComponent "CycleStarter" handled in the control thread.
2018-08-20T16:49:33.640Z,1534783773.640 [ComponentRegistry](DEBUG): Component "CommandLine" handled in its own thread.
2018-08-20T16:49:33.641Z,1534783773.641 [CommandLine ThreadHandler](DEBUG): Created PCaller Thread at 404B14E0
2018-08-20T16:49:33.641Z,1534783773.641 [CommandLine ThreadHandler](INFO): Protected caller Thread ID is 1274
2018-08-20T16:49:33.642Z,1534783773.642 [ComponentRegistry](DEBUG): Component "logger" handled in its own thread.
2018-08-20T16:49:33.643Z,1534783773.643 [logger ThreadHandler](DEBUG): Created PCaller Thread at 404E14E0
2018-08-20T16:49:33.643Z,1534783773.643 [logger ThreadHandler](INFO): Protected caller Thread ID is 1275
2018-08-20T16:49:33.646Z,1534783773.646 [ComponentRegistry](DEBUG): SyncComponent "LogSplitter" handled in the control thread.
2018-08-20T16:49:33.646Z,1534783773.646 [Supervisor](INFO): Looking for Config files in directory: Config/
2018-08-20T16:49:33.648Z,1534783773.648 [Supervisor](INFO): Opening Config file at: Config/Control.cfg
2018-08-20T16:49:34.005Z,1534783774.005 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Control
2018-08-20T16:49:34.005Z,1534783774.005 [Supervisor](INFO): Opening Config file at: Config/logger.cfg
2018-08-20T16:49:34.222Z,1534783774.222 [ComponentRegistry](DEBUG): Loaded Config Component "Config/logger
2018-08-20T16:49:34.223Z,1534783774.223 [Supervisor](INFO): Opening Config file at: Config/Servo.cfg
2018-08-20T16:49:34.524Z,1534783774.524 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Servo
2018-08-20T16:49:34.525Z,1534783774.525 [Supervisor](INFO): Opening Config file at: Config/Derivation.cfg
2018-08-20T16:49:34.670Z,1534783774.670 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Derivation
2018-08-20T16:49:34.670Z,1534783774.670 [Supervisor](INFO): Opening Config file at: Config/Sample.cfg
2018-08-20T16:49:34.770Z,1534783774.770 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Sample
2018-08-20T16:49:34.770Z,1534783774.770 [Supervisor](INFO): Opening Config file at: Config/Simulator.cfg
2018-08-20T16:49:35.360Z,1534783775.360 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Simulator
2018-08-20T16:49:35.361Z,1534783775.361 [Supervisor](INFO): Opening Config file at: Config/Sensor.cfg
2018-08-20T16:49:35.808Z,1534783775.808 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Sensor
2018-08-20T16:49:35.809Z,1534783775.809 [Supervisor](INFO): Opening Config file at: Config/vehicle.cfg
2018-08-20T16:49:36.295Z,1534783776.295 [ComponentRegistry](DEBUG): Loaded Config Component "Config/vehicle
2018-08-20T16:49:36.296Z,1534783776.296 [Supervisor](INFO): Opening Config file at: Config/workSite.cfg
2018-08-20T16:49:36.403Z,1534783776.403 [ComponentRegistry](DEBUG): Loaded Config Component "Config/workSite
2018-08-20T16:49:36.403Z,1534783776.403 [Supervisor](INFO): Opening Config file at: Config/secure.cfg
2018-08-20T16:49:36.501Z,1534783776.501 [ComponentRegistry](DEBUG): Loaded Config Component "Config/secure
2018-08-20T16:49:36.502Z,1534783776.502 [Supervisor](INFO): Opening Config file at: Config/Navigation.cfg
2018-08-20T16:49:36.718Z,1534783776.718 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Navigation
2018-08-20T16:49:36.719Z,1534783776.719 [Supervisor](INFO): Opening Config file at: Config/BIT.cfg
2018-08-20T16:49:36.940Z,1534783776.940 [ComponentRegistry](DEBUG): Loaded Config Component "Config/BIT
2018-08-20T16:49:36.941Z,1534783776.941 [Supervisor](INFO): Opening Config file at: Config/Science.cfg
2018-08-20T16:49:37.309Z,1534783777.309 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Science
2018-08-20T16:49:37.309Z,1534783777.309 [Supervisor](INFO): Opening Config file at: Config/Estimation.cfg
2018-08-20T16:49:37.455Z,1534783777.455 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Estimation
2018-08-20T16:49:37.456Z,1534783777.456 [Supervisor](INFO): Opening Config file at: Config/Guidance.cfg
2018-08-20T16:49:37.539Z,1534783777.539 [Supervisor](INFO): Looking for Config files in directory: Config/lrauv-daphne/
2018-08-20T16:49:37.540Z,1534783777.540 [Supervisor](INFO): Opening Config file at: Config/lrauv-daphne/Control.cfg
2018-08-20T16:49:37.645Z,1534783777.645 [Supervisor](INFO): Opening Config file at: Config/lrauv-daphne/logger.cfg
2018-08-20T16:49:37.768Z,1534783777.768 [Supervisor](INFO): Opening Config file at: Config/lrauv-daphne/Servo.cfg
2018-08-20T16:49:37.864Z,1534783777.864 [Supervisor](INFO): Opening Config file at: Config/lrauv-daphne/Simulator.cfg
2018-08-20T16:49:37.950Z,1534783777.950 [Supervisor](INFO): Opening Config file at: Config/lrauv-daphne/Sensor.cfg
2018-08-20T16:49:38.116Z,1534783778.116 [Supervisor](INFO): Opening Config file at: Config/lrauv-daphne/vehicle.cfg
2018-08-20T16:49:38.304Z,1534783778.304 [Supervisor](INFO): Opening Config file at: Config/lrauv-daphne/workSite.cfg
2018-08-20T16:49:38.380Z,1534783778.380 [Supervisor](INFO): Opening Config file at: Config/lrauv-daphne/Battery.cfg
2018-08-20T16:49:38.619Z,1534783778.619 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Battery
2018-08-20T16:49:38.619Z,1534783778.619 [Supervisor](INFO): Opening Config file at: Config/lrauv-daphne/secure.cfg
2018-08-20T16:49:38.703Z,1534783778.703 [Supervisor](INFO): Opening Config file at: Config/lrauv-daphne/Navigation.cfg
2018-08-20T16:49:38.795Z,1534783778.795 [Supervisor](INFO): Opening Config file at: Config/lrauv-daphne/BIT.cfg
2018-08-20T16:49:38.899Z,1534783778.899 [Supervisor](INFO): Opening Config file at: Config/lrauv-daphne/Science.cfg
2018-08-20T16:49:39.031Z,1534783779.031 [Supervisor](IMPORTANT): Reading configuration overrides from Data/persisted.cfg
2018-08-20T16:49:39.035Z,1534783779.035 [Module Loader](DEBUG): Loading Module at Modules/Guidance.so
2018-08-20T16:49:39.350Z,1534783779.350 [Module Loader](DEBUG): Loaded Module: Guidance (Contains behaviors and commands)
2018-08-20T16:49:39.350Z,1534783779.350 [Module Loader](DEBUG): Loading Module at Modules/Derivation.so
2018-08-20T16:49:39.394Z,1534783779.394 [DepthRateCalculator] Loaded
2018-08-20T16:49:39.394Z,1534783779.394 [ComponentRegistry](DEBUG): SyncComponent "DepthRateCalculator" handled in the control thread.
2018-08-20T16:49:39.402Z,1534783779.402 [PitchRateCalculator] Loaded
2018-08-20T16:49:39.402Z,1534783779.402 [ComponentRegistry](DEBUG): SyncComponent "PitchRateCalculator" handled in the control thread.
2018-08-20T16:49:39.421Z,1534783779.421 [SpeedCalculator] Loaded
2018-08-20T16:49:39.421Z,1534783779.421 [ComponentRegistry](DEBUG): SyncComponent "SpeedCalculator" handled in the control thread.
2018-08-20T16:49:39.444Z,1534783779.444 [TempGradientCalculator] Loaded
2018-08-20T16:49:39.445Z,1534783779.445 [ComponentRegistry](DEBUG): SyncComponent "TempGradientCalculator" handled in the control thread.
2018-08-20T16:49:39.462Z,1534783779.462 [VerticalTemperatureHomogeneityIndexCalculator] Loaded
2018-08-20T16:49:39.462Z,1534783779.462 [ComponentRegistry](DEBUG): SyncComponent "VerticalTemperatureHomogeneityIndexCalculator" handled in the control thread.
2018-08-20T16:49:39.468Z,1534783779.468 [YawRateCalculator] Loaded
2018-08-20T16:49:39.468Z,1534783779.468 [ComponentRegistry](DEBUG): SyncComponent "YawRateCalculator" handled in the control thread.
2018-08-20T16:49:39.511Z,1534783779.511 [ElevatorOffsetCalculator] Loaded
2018-08-20T16:49:39.511Z,1534783779.511 [ComponentRegistry](DEBUG): SyncComponent "ElevatorOffsetCalculator" handled in the control thread.
2018-08-20T16:49:39.512Z,1534783779.512 [Module Loader](DEBUG): Loaded Module: Derivation (Contains the base derivation components)
2018-08-20T16:49:39.513Z,1534783779.513 [Module Loader](DEBUG): Loading Module at Modules/Estimation.so
2018-08-20T16:49:39.601Z,1534783779.601 [StratificationFrontDetector](INFO): threshold set to: 0.399988 degC
2018-08-20T16:49:39.601Z,1534783779.601 [StratificationFrontDetector](DEBUG): (re)initializing
2018-08-20T16:49:39.602Z,1534783779.602 [StratificationFrontDetector] Loaded
2018-08-20T16:49:39.602Z,1534783779.602 [ComponentRegistry](DEBUG): SyncComponent "StratificationFrontDetector" handled in the control thread.
2018-08-20T16:49:39.602Z,1534783779.602 [Module Loader](DEBUG): Loaded Module: Estimation (Contains the base estimation components)
2018-08-20T16:49:39.603Z,1534783779.603 [Module Loader](DEBUG): Loading Module at Modules/Servo.so
2018-08-20T16:49:39.719Z,1534783779.719 [BuoyancyServo] Loaded
2018-08-20T16:49:39.720Z,1534783779.720 [ComponentRegistry](DEBUG): SyncComponent "BuoyancyServo" handled in the control thread.
2018-08-20T16:49:39.735Z,1534783779.735 [ElevatorServo] Loaded
2018-08-20T16:49:39.736Z,1534783779.736 [ComponentRegistry](DEBUG): SyncComponent "ElevatorServo" handled in the control thread.
2018-08-20T16:49:39.752Z,1534783779.752 [MassServo] Loaded
2018-08-20T16:49:39.752Z,1534783779.752 [ComponentRegistry](DEBUG): SyncComponent "MassServo" handled in the control thread.
2018-08-20T16:49:39.768Z,1534783779.768 [RudderServo] Loaded
2018-08-20T16:49:39.768Z,1534783779.768 [ComponentRegistry](DEBUG): SyncComponent "RudderServo" handled in the control thread.
2018-08-20T16:49:39.783Z,1534783779.783 [ThrusterServo] Loaded
2018-08-20T16:49:39.784Z,1534783779.784 [ComponentRegistry](DEBUG): SyncComponent "ThrusterServo" handled in the control thread.
2018-08-20T16:49:39.784Z,1534783779.784 [Module Loader](DEBUG): Loaded Module: Servo (This is the module containing motor controllers)
2018-08-20T16:49:39.785Z,1534783779.785 [Module Loader](DEBUG): Loading Module at Modules/Sample.so
2018-08-20T16:49:39.799Z,1534783779.799 [Module Loader](DEBUG): Loaded Module: Sample (This is a Sample Module of Sample Components)
2018-08-20T16:49:39.799Z,1534783779.799 [Module Loader](DEBUG): Loading Module at Modules/Simulator.so
2018-08-20T16:49:39.900Z,1534783779.900 [Module Loader](DEBUG): Loaded Module: Simulator (This is the module containing the Simulator)
2018-08-20T16:49:39.901Z,1534783779.901 [Module Loader](DEBUG): Loading Module at Modules/Sensor.so
2018-08-20T16:49:40.209Z,1534783780.209 [DataOverHttps] Loaded
2018-08-20T16:49:40.210Z,1534783780.210 [ComponentRegistry](DEBUG): SyncComponent "DataOverHttps" handled in the control thread.
2018-08-20T16:49:40.224Z,1534783780.224 [Depth_Keller] Loaded
2018-08-20T16:49:40.224Z,1534783780.224 [ComponentRegistry](DEBUG): SyncComponent "Depth_Keller" handled in the control thread.
2018-08-20T16:49:40.230Z,1534783780.230 [DropWeight] Loaded
2018-08-20T16:49:40.230Z,1534783780.230 [ComponentRegistry](DEBUG): SyncComponent "DropWeight" handled in the control thread.
2018-08-20T16:49:40.335Z,1534783780.335 [NAL9602] Loaded
2018-08-20T16:49:40.335Z,1534783780.335 [ComponentRegistry](DEBUG): SyncComponent "NAL9602" handled in the control thread.
2018-08-20T16:49:40.353Z,1534783780.353 [Onboard] Loaded
2018-08-20T16:49:40.353Z,1534783780.353 [ComponentRegistry](DEBUG): SyncComponent "Onboard" handled in the control thread.
2018-08-20T16:49:40.364Z,1534783780.364 [Radio_Surface] Loaded
2018-08-20T16:49:40.364Z,1534783780.364 [ComponentRegistry](DEBUG): Component "Radio_Surface" handled in its own thread.
2018-08-20T16:49:40.366Z,1534783780.366 [Radio_Surface ThreadHandler](DEBUG): Created PCaller Thread at 408854E0
2018-08-20T16:49:40.366Z,1534783780.366 [Radio_Surface ThreadHandler](INFO): Protected caller Thread ID is 1358
2018-08-20T16:49:40.416Z,1534783780.416 [PNI_TCM] Loaded
2018-08-20T16:49:40.416Z,1534783780.416 [ComponentRegistry](DEBUG): SyncComponent "PNI_TCM" handled in the control thread.
2018-08-20T16:49:40.480Z,1534783780.480 [Rowe_600LCM] Loaded
2018-08-20T16:49:40.481Z,1534783780.481 [ComponentRegistry](DEBUG): Component "Rowe_600LCM" handled in its own thread.
2018-08-20T16:49:40.482Z,1534783780.482 [Rowe_600LCM ThreadHandler](DEBUG): Created PCaller Thread at 408B54E0
2018-08-20T16:49:40.482Z,1534783780.482 [Rowe_600LCM ThreadHandler](INFO): Protected caller Thread ID is 1359
2018-08-20T16:49:42.307Z,1534783782.307 [BPC1] Loaded
2018-08-20T16:49:42.307Z,1534783782.307 [ComponentRegistry](DEBUG): SyncComponent "BPC1" handled in the control thread.
2018-08-20T16:49:42.307Z,1534783782.307 [Module Loader](DEBUG): Loaded Module: Sensor (Contains the sensor components)
2018-08-20T16:49:42.308Z,1534783782.308 [Module Loader](DEBUG): Loading Module at Modules/BIT.so
2018-08-20T16:49:42.919Z,1534783782.919 [SBIT](DEBUG): Construct Startup Built In Test.
2018-08-20T16:49:42.998Z,1534783782.998 [SBIT] Loaded
2018-08-20T16:49:42.998Z,1534783782.998 [ComponentRegistry](DEBUG): SyncComponent "SBIT" handled in the control thread.
2018-08-20T16:49:42.999Z,1534783782.999 [IBIT](DEBUG): Construct Initiated Built In Test.
2018-08-20T16:49:43.035Z,1534783783.035 [IBIT] Loaded
2018-08-20T16:49:43.035Z,1534783783.035 [ComponentRegistry](DEBUG): SyncComponent "IBIT" handled in the control thread.
2018-08-20T16:49:43.058Z,1534783783.058 [CBIT](DEBUG): Construct Continuous Built In Test.
2018-08-20T16:49:43.233Z,1534783783.233 [CBIT] Loaded
2018-08-20T16:49:43.234Z,1534783783.234 [ComponentRegistry](DEBUG): SyncComponent "CBIT" handled in the control thread.
2018-08-20T16:49:43.234Z,1534783783.234 [Module Loader](DEBUG): Loaded Module: BIT (Contains the BuiltInTest components, such as C Built In Test)
2018-08-20T16:49:43.235Z,1534783783.235 [Module Loader](DEBUG): Loading Module at Modules/Science.so
2018-08-20T16:49:43.383Z,1534783783.383 [Aanderaa_O2] Loaded
2018-08-20T16:49:43.384Z,1534783783.384 [ComponentRegistry](DEBUG): SyncComponent "Aanderaa_O2" handled in the control thread.
2018-08-20T16:49:43.399Z,1534783783.399 [PAR_Licor] Loaded
2018-08-20T16:49:43.399Z,1534783783.399 [ComponentRegistry](DEBUG): SyncComponent "PAR_Licor" handled in the control thread.
2018-08-20T16:49:43.452Z,1534783783.452 [WetLabsBB2FL] Loaded
2018-08-20T16:49:43.452Z,1534783783.452 [ComponentRegistry](DEBUG): Component "WetLabsBB2FL" handled in its own thread.
2018-08-20T16:49:43.453Z,1534783783.453 [WetLabsBB2FL ThreadHandler](DEBUG): Created PCaller Thread at 409794E0
2018-08-20T16:49:43.454Z,1534783783.454 [WetLabsBB2FL ThreadHandler](INFO): Protected caller Thread ID is 1360
2018-08-20T16:49:43.454Z,1534783783.454 [Module Loader](DEBUG): Loaded Module: Science (Contains the science components)
2018-08-20T16:49:43.455Z,1534783783.455 [Module Loader](DEBUG): Loading Module at Modules/Control.so
2018-08-20T16:49:43.525Z,1534783783.525 [VerticalControl](DEBUG): Construct VerticalControl.
2018-08-20T16:49:43.615Z,1534783783.615 [VerticalControl] Loaded
2018-08-20T16:49:43.615Z,1534783783.615 [ComponentRegistry](DEBUG): SyncComponent "VerticalControl" handled in the control thread.
2018-08-20T16:49:43.616Z,1534783783.616 [HorizontalControl](DEBUG): Construct HorizontalControl.
2018-08-20T16:49:43.677Z,1534783783.677 [HorizontalControl] Loaded
2018-08-20T16:49:43.677Z,1534783783.677 [ComponentRegistry](DEBUG): SyncComponent "HorizontalControl" handled in the control thread.
2018-08-20T16:49:43.678Z,1534783783.678 [SpeedControl](DEBUG): Construct SpeedControl.
2018-08-20T16:49:43.680Z,1534783783.680 [SpeedControl] Loaded
2018-08-20T16:49:43.680Z,1534783783.680 [ComponentRegistry](DEBUG): SyncComponent "SpeedControl" handled in the control thread.
2018-08-20T16:49:43.681Z,1534783783.681 [LoopControl](DEBUG): Construct LoopControl.
2018-08-20T16:49:43.681Z,1534783783.681 [LoopControl] Loaded
2018-08-20T16:49:43.682Z,1534783783.682 [ComponentRegistry](DEBUG): SyncComponent "LoopControl" handled in the control thread.
2018-08-20T16:49:43.682Z,1534783783.682 [Module Loader](DEBUG): Loaded Module: Control (Contains the Control components, such as Depth, Heading, and Speed Control)
2018-08-20T16:49:43.683Z,1534783783.683 [Module Loader](DEBUG): Loading Module at Modules/Trigger.so
2018-08-20T16:49:43.709Z,1534783783.709 [Module Loader](DEBUG): Loaded Module: Trigger (Contains triggers for use in missions)
2018-08-20T16:49:43.709Z,1534783783.709 [Module Loader](DEBUG): Loading Module at Modules/Navigation.so
2018-08-20T16:49:43.804Z,1534783783.804 [DeadReckonUsingSpeedCalculator] Loaded
2018-08-20T16:49:43.804Z,1534783783.804 [ComponentRegistry](DEBUG): SyncComponent "DeadReckonUsingSpeedCalculator" handled in the control thread.
2018-08-20T16:49:43.821Z,1534783783.821 [NavChart] Loaded
2018-08-20T16:49:43.822Z,1534783783.822 [ComponentRegistry](DEBUG): SyncComponent "NavChart" handled in the control thread.
2018-08-20T16:49:43.826Z,1534783783.826 [UniversalFixResidualReporter] Loaded
2018-08-20T16:49:43.826Z,1534783783.826 [ComponentRegistry](DEBUG): SyncComponent "UniversalFixResidualReporter" handled in the control thread.
2018-08-20T16:49:43.827Z,1534783783.827 [Module Loader](DEBUG): Loaded Module: Navigation (Contains the base navigation components)
2018-08-20T16:49:43.831Z,1534783783.831 [ComponentRegistry](DEBUG): SyncComponent "MissionManager" handled in the control thread.
2018-08-20T16:49:43.832Z,1534783783.832 [ComponentRegistry](DEBUG): SyncComponent "Reporter" handled in the control thread.
2018-08-20T16:49:43.839Z,1534783783.839 [ComponentRegistry](DEBUG): Component "NavChartDb" handled in its own thread.
2018-08-20T16:49:43.840Z,1534783783.840 [NavChartDb ThreadHandler](DEBUG): Created PCaller Thread at 40A054E0
2018-08-20T16:49:43.841Z,1534783783.841 [NavChartDb ThreadHandler](INFO): Protected caller Thread ID is 1361
2018-08-20T16:49:43.848Z,1534783783.848 [Supervisor](INFO): Main Thread ID is 1271
2018-08-20T16:49:43.848Z,1534783783.848 [Supervisor](DEBUG): Running supervisor.
2018-08-20T16:49:43.849Z,1534783783.849 [CommandLine ThreadHandler](INFO): Handler Thread ID is 1362
2018-08-20T16:49:43.852Z,1534783783.852 [controlThread ThreadHandler](INFO): Handler Thread ID is 1363
2018-08-20T16:49:43.852Z,1534783783.852 [controlThread](DEBUG): Initializing ControlThread
2018-08-20T16:49:43.853Z,1534783783.853 [DepthRateCalculator](DEBUG): Initializing DepthRateCalculator.
2018-08-20T16:49:43.853Z,1534783783.853 [PitchRateCalculator](DEBUG): Initializing PitchRateCalculator.
2018-08-20T16:49:43.854Z,1534783783.854 [SpeedCalculator](DEBUG): Initializing SpeedCalculator.
2018-08-20T16:49:43.854Z,1534783783.854 [TempGradientCalculator](DEBUG): Initializing TempGradientCalculator.
2018-08-20T16:49:43.855Z,1534783783.855 [VerticalTemperatureHomogeneityIndexCalculator](DEBUG): (re)initializing
2018-08-20T16:49:43.855Z,1534783783.855 [YawRateCalculator](DEBUG): Initializing YawRateCalculator.
2018-08-20T16:49:43.856Z,1534783783.856 [ElevatorOffsetCalculator](DEBUG): Initializing ElevatorOffsetCalculator.
2018-08-20T16:49:43.863Z,1534783783.863 [SBIT](INFO): Initialize SBIT Component.
2018-08-20T16:49:43.864Z,1534783783.864 [SBIT](IMPORTANT): git: 2018-08-20
2018-08-20T16:49:43.864Z,1534783783.864 [SBIT](INFO): git hash: 695b514009632b0c9b638e65628c1e5f155de51b
2018-08-20T16:49:43.864Z,1534783783.864 [SBIT](IMPORTANT): Kernel Release: 2.6.27.8
2018-08-20T16:49:43.866Z,1534783783.866 [SBIT](INFO): Kernel Reporting Different Version From Configuration.
Kernel Expected: #639 PREEMPT Wed Mar 12 12:53:33 PDT 2014
Kernel Reported: #2 PREEMPT Thu Jan 11 20:13:48 PST 2018
2018-08-20T16:49:43.867Z,1534783783.867 [SBIT](INFO): Beginning SBIT in 23.000000 seconds.
2018-08-20T16:49:43.867Z,1534783783.867 [IBIT](INFO): Initialize IBIT Component.
2018-08-20T16:49:43.868Z,1534783783.868 [CBIT](DEBUG): Initialize CBIT Component.
2018-08-20T16:49:43.868Z,1534783783.868 [CBIT](INFO): Last reboot was NOT due to watchdog timer.
2018-08-20T16:49:43.869Z,1534783783.869 [logger ThreadHandler](INFO): Handler Thread ID is 1364
2018-08-20T16:49:43.889Z,1534783783.889 [Radio_Surface ThreadHandler](INFO): Handler Thread ID is 1365
2018-08-20T16:49:43.895Z,1534783783.895 [Radio_Surface](INFO): Powering up
2018-08-20T16:49:43.901Z,1534783783.901 [Rowe_600LCM ThreadHandler](INFO): Handler Thread ID is 1366
2018-08-20T16:49:43.902Z,1534783783.902 [Rowe_600LCM](INFO): Initializing
2018-08-20T16:49:43.902Z,1534783783.902 [Rowe_600LCM](INFO): Checking LCM
2018-08-20T16:49:43.912Z,1534783783.912 [Rowe_600LCM](INFO): LCM OK
2018-08-20T16:49:43.912Z,1534783783.912 [Rowe_600LCM](INFO): Powering up
2018-08-20T16:49:43.917Z,1534783783.917 [WetLabsBB2FL ThreadHandler](INFO): Handler Thread ID is 1367
2018-08-20T16:49:43.919Z,1534783783.919 [WetLabsBB2FL](INFO): Powering down
2018-08-20T16:49:43.946Z,1534783783.946 [NavChartDb ThreadHandler](INFO): Handler Thread ID is 1368
2018-08-20T16:49:43.949Z,1534783783.949 [NavChartDb](INFO): Looking for Electronic Nav Chart file at: Resources/ElectronicNavigationCharts/US1WC07M.000
2018-08-20T16:49:43.949Z,1534783783.949 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US1WC07M.000
2018-08-20T16:49:43.950Z,1534783783.950 [NavChartDb](INFO): Looking for Electronic Nav Chart file at: Resources/ElectronicNavigationCharts/US2WC11M.000
2018-08-20T16:49:43.950Z,1534783783.950 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US2WC11M.000
2018-08-20T16:49:43.950Z,1534783783.950 [NavChartDb](INFO): Looking for Electronic Nav Chart file at: Resources/ElectronicNavigationCharts/US3CA52M.000
2018-08-20T16:49:43.950Z,1534783783.950 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US3CA52M.000
2018-08-20T16:49:43.950Z,1534783783.950 [NavChartDb](INFO): Looking for Electronic Nav Chart file at: Resources/ElectronicNavigationCharts/US4CA60M.000
2018-08-20T16:49:43.951Z,1534783783.951 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US4CA60M.000
2018-08-20T16:49:43.951Z,1534783783.951 [NavChartDb](INFO): Looking for Electronic Nav Chart file at: Resources/ElectronicNavigationCharts/US5CA50M.000
2018-08-20T16:49:43.951Z,1534783783.951 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA50M.000
2018-08-20T16:49:43.951Z,1534783783.951 [NavChartDb](INFO): Looking for Electronic Nav Chart file at: Resources/ElectronicNavigationCharts/US5CA61M.000
2018-08-20T16:49:43.951Z,1534783783.951 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA61M.000
2018-08-20T16:49:43.952Z,1534783783.952 [NavChartDb](INFO): Looking for Electronic Nav Chart file at: Resources/ElectronicNavigationCharts/US5CA62M.000
2018-08-20T16:49:43.952Z,1534783783.952 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA62M.000
2018-08-20T16:49:43.952Z,1534783783.952 [NavChartDb](INFO): Looking for Electronic Nav Chart file at: Resources/ElectronicNavigationCharts/US5CA83M.000
2018-08-20T16:49:43.952Z,1534783783.952 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA83M.000
2018-08-20T16:49:43.985Z,1534783783.985 [VerticalControl](DEBUG): Initialize VerticalControlComponent.
2018-08-20T16:49:43.987Z,1534783783.987 [HorizontalControl](DEBUG): Initialize HorizontalControlComponent.
2018-08-20T16:49:43.988Z,1534783783.988 [SpeedControl](DEBUG): Initialize SpeedControlComponent.
2018-08-20T16:49:43.988Z,1534783783.988 [LoopControl](DEBUG): Initialize LoopControlComponent.
2018-08-20T16:49:43.989Z,1534783783.989 [DeadReckonUsingSpeedCalculator](DEBUG): Initializing DeadReckonUsingSpeedCalculator component.
2018-08-20T16:49:43.990Z,1534783783.990 [DeadReckonUsingSpeedCalculator](INFO): Will consider orientation measurement stale after 120s.
2018-08-20T16:49:43.990Z,1534783783.990 [DeadReckonUsingSpeedCalculator](INFO): Will consider velocity measurement stale after 20s.
2018-08-20T16:49:43.991Z,1534783783.991 [NavChart](DEBUG): Initialize NavChart Navigation.
2018-08-20T16:49:43.991Z,1534783783.991 [UniversalFixResidualReporter](DEBUG): Initializing UniversalFixResidualReporter component.
2018-08-20T16:49:43.992Z,1534783783.992 [MissionManager](INFO): Loading Mission: Missions/Startup.xml
2018-08-20T16:49:44.020Z,1534783784.020 [Startup:A.GoToSurface](DEBUG): Construct GoToSurface.
2018-08-20T16:49:44.060Z,1534783784.060 [MissionManager](DEBUG): 
<?xml version="1.0" encoding="UTF-8"?>
<Mission xmlns="Tethys"
       xmlns:Control="Tethys/Control"
       xmlns:Guidance="Tethys/Guidance" 
       xmlns:Units="Tethys/Units"
       xmlns:Universal="Tethys/Universal"
       xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
       xsi:schemaLocation="Tethys http://okeanids.mbari.org/tethys/Xml/Tethys.xsd
                           Tethys/Control http://okeanids.mbari.org/tethys/Xml/Control.xsd
                           Tethys/Guidance http://okeanids.mbari.org/tethys/Xml/Guidance.xsd
                           Tethys/Units http://okeanids.mbari.org/tethys/Xml/Units.xsd
                           Tethys/Universal http://okeanids.mbari.org/tethys/Xml/Universal.xsd"
       Id="Startup">

    <Guidance:GoToSurface>
        <Progression/>
    </Guidance:GoToSurface>

    <Aggregate Id="StartupSatComms">

        <Sequence/>

        <ReadDatum>
            <Timeout Duration="P1M" />
            <Universal:latitude_fix/>
        </ReadDatum>

        <ReadDatum>
            <Timeout Duration="P1M" />
            <Universal:platform_communications/>
        </ReadDatum>

    </Aggregate>

</Mission>


2018-08-20T16:49:44.061Z,1534783784.061 [MissionManager](INFO): Loading Mission: Missions/Default.xml
2018-08-20T16:49:44.136Z,1534783784.136 [MissionManager](INFO): DefineArg Default.ElapsedSinceDefaultStarted = 0.000000 min
2018-08-20T16:49:44.157Z,1534783784.157 [Default:A.Wait](DEBUG): Construct Wait.
2018-08-20T16:49:44.159Z,1534783784.159 [Default:B.GoToSurface](DEBUG): Construct GoToSurface.
2018-08-20T16:49:44.190Z,1534783784.190 [Default:CheckIn:Read_Iridium:A_Timeout:A.Execute](DEBUG): Construct Execute.
2018-08-20T16:49:44.192Z,1534783784.192 [Default:CheckIn:C.Wait](DEBUG): Construct Wait.
2018-08-20T16:49:44.214Z,1534783784.214 [Default:E.Execute](DEBUG): Construct Execute.
2018-08-20T16:49:44.234Z,1534783784.234 [MissionManager](DEBUG): 
<?xml version="1.0" encoding="UTF-8"?>
<Mission xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
         xmlns="Tethys"
         xmlns:Units="Tethys/Units"
         xmlns:Guidance="Tethys/Guidance"
         xmlns:Universal="Tethys/Universal"
         xsi:schemaLocation="Tethys http://okeanids.mbari.org/tethys/Xml/Tethys.xsd
                             Tethys/Units http://okeanids.mbari.org/tethys/Xml/Units.xsd
                             Tethys/Guidance http://okeanids.mbari.org/tethys/Xml/Guidance.xsd
                             Tethys/Universal http://okeanids.mbari.org/tethys/Xml/Universal.xsd"
         Id="Default">

    <DefineArg Name="ElapsedSinceDefaultStarted"><Units:minute/><Value>0</Value></DefineArg>

    <Guidance:Wait>
        <Description>
            Wait a moment to see if the scheduler starts a new mission before
            starting to actually run Default.
        </Description>
        <Sequence/>
        <Setting><Guidance:Wait.duration/><Units:second/><Value>13</Value></Setting>
    </Guidance:Wait>

    <Guidance:GoToSurface>
        <Progression/>
    </Guidance:GoToSurface>

    <Aggregate Id="CheckIn">

        <Sequence Repeat="288"/>

        <ReadDatum Id="Read_GPS">
            <Timeout Duration="P5M"/>
            <Universal:time_fix/>
        </ReadDatum>

        <ReadDatum Id="Read_Iridium">
            <Timeout Duration="P2H">
                <Guidance:Execute>
                    <Sequence/>
                    <Setting><Guidance:Execute.command/><String>Burn 300</String></Setting>
                </Guidance:Execute>
                <Syslog Severity="Critical">Dropped weight due to communications timeout.</Syslog>
            </Timeout>
            <Universal:platform_communications/>
        </ReadDatum>

        <Guidance:Wait>
            <Sequence/>
            <Setting><Guidance:Wait.duration/><Units:minute/><Value>5</Value></Setting>
        </Guidance:Wait>

        <Assign><Sequence/><Arg Name="ElapsedSinceDefaultStarted"/><Elapsed><Universal:mission_started/></Elapsed></Assign>

        <Syslog Severity="Important">Default mission has been running for <Arg Name="ElapsedSinceDefaultStarted"/><Units:minute/></Syslog>

    </Aggregate>

    <Syslog Severity="Important">Restarting logs and Default mission.</Syslog>

    <Guidance:Execute>
        <Sequence/>
        <Setting><Guidance:Execute.command/><String>restart logs</String></Setting>
    </Guidance:Execute>

</Mission>


2018-08-20T16:49:44.239Z,1534783784.239 [controlThread](DEBUG): Component order: CycleStarter,DataOverHttps,Depth_Keller,DropWeight,NAL9602,Onboard,PNI_TCM,BPC1,Aanderaa_O2,PAR_Licor,Depth_Keller,PAR_Licor,DepthRateCalculator,PitchRateCalculator,SpeedCalculator,TempGradientCalculator,VerticalTemperatureHomogeneityIndexCalculator,YawRateCalculator,ElevatorOffsetCalculator,StratificationFrontDetector,DeadReckonUsingSpeedCalculator,NavChart,UniversalFixResidualReporter,MissionManager,VerticalControl,HorizontalControl,SpeedControl,LoopControl,BuoyancyServo,ElevatorServo,MassServo,RudderServo,ThrusterServo,SBIT,IBIT,CBIT,Reporter,LogSplitter,
2018-08-20T16:49:44.268Z,1534783784.268 [DataOverHttps](DEBUG): dashIP=134.89.2.23 starts with a digit so assuming it is a numeric IP
2018-08-20T16:49:44.306Z,1534783784.306 [Depth_Keller](ERROR): Pressure reading out of range: 1831.023193 decibar
2018-08-20T16:49:44.572Z,1534783784.572 [DepthRateCalculator](ERROR): Depth measurement is not active
2018-08-20T16:49:44.685Z,1534783784.685 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2018-08-20T16:49:44.810Z,1534783784.810 [BuoyancyServo](DEBUG): Initializing EZServoServo.
2018-08-20T16:49:44.817Z,1534783784.817 [BuoyancyServo](DEBUG): Initializing BuoyancyServo.
2018-08-20T16:49:44.824Z,1534783784.824 [ElevatorServo](DEBUG): Initializing EZServoServo.
2018-08-20T16:49:44.829Z,1534783784.829 [ElevatorServo](DEBUG): Initializing ElevatorServo.
2018-08-20T16:49:44.835Z,1534783784.835 [MassServo](DEBUG): Initializing EZServoServo.
2018-08-20T16:49:44.841Z,1534783784.841 [MassServo](DEBUG): Initializing MassServo.
2018-08-20T16:49:44.847Z,1534783784.847 [RudderServo](DEBUG): Initializing EZServoServo.
2018-08-20T16:49:44.853Z,1534783784.853 [RudderServo](DEBUG): Initializing RudderServo.
2018-08-20T16:49:44.875Z,1534783784.875 [ThrusterServo](DEBUG): Initializing EZServoServo.
2018-08-20T16:49:44.881Z,1534783784.881 [ThrusterServo](DEBUG): Initializing ThrusterServo.
2018-08-20T16:49:45.250Z,1534783785.250 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2018-08-20T16:49:48.201Z,1534783788.201 [Rowe_600LCM](INFO): Stopping potential previous instance(s) of Rowe LCM interface
2018-08-20T16:49:48.336Z,1534783788.336 [Rowe_600LCM](INFO): Started Rowe LCM interface with command:nohup ./lrauv-framework/onboard/bin/roweadcp -ldir /mnt/mmc/LRAUV/Logs/latest/ -dev /dev/ttyB4 -b 9600 >& /dev/null &
2018-08-20T16:49:48.394Z,1534783788.394 [Rowe_600LCM](INFO): LCM subscribed to channel:Rowe_600LCM.adcp_dvl.bottom_track
2018-08-20T16:49:48.394Z,1534783788.394 [Rowe_600LCM](INFO): LCM subscribed to channel:Rowe_600LCM.adcp_dvl.vehicle_water_velocity
2018-08-20T16:49:48.395Z,1534783788.395 [Rowe_600LCM](INFO): LCM subscribed to channel:rowe_dvl.rowe
2018-08-20T16:49:55.330Z,1534783795.330 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2018-08-20T16:49:55.695Z,1534783795.695 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2018-08-20T16:49:56.074Z,1534783796.074 [Aanderaa_O2](INFO): Powering down
2018-08-20T16:49:56.163Z,1534783796.163 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2018-08-20T16:49:56.443Z,1534783796.443 [DataOverHttps](INFO): setting available, lastComms_.elapsed()=0.004306
2018-08-20T16:49:56.511Z,1534783796.511 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2018-08-20T16:49:56.923Z,1534783796.923 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2018-08-20T16:49:57.313Z,1534783797.313 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2018-08-20T16:50:07.436Z,1534783807.436 [SBIT](IMPORTANT): Beginning Startup BIT
2018-08-20T16:50:07.459Z,1534783807.459 [CBIT](IMPORTANT): Beginning ground fault scan
2018-08-20T16:50:10.640Z,1534783810.640 [NAL9602](INFO): Powering up NAL9602
2018-08-20T16:50:17.988Z,1534783817.988 [CBIT](IMPORTANT): Ground fault detected
mA:
CHAN A0 (Batt): 4.657929
CHAN A1 (24V): -0.009603
CHAN A2 (12V): -0.001824
CHAN A3 (5V): -0.001133
CHAN B0 (3.3V): -0.000175
CHAN B1 (3.15aV): -0.000629
CHAN B2 (3.15bV): -0.000325
CHAN B3 (GND): 0.000500
OPEN: -0.000451
Full Scale Calc: 4.765 mA, -1.589 mA
2018-08-20T16:50:21.828Z,1534783821.828 [NAL9602](INFO): NAL9602 initialized
2018-08-20T16:51:08.200Z,1534783868.200 [SBIT](IMPORTANT): SBIT PASSED
2018-08-20T16:51:08.280Z,1534783868.280 [CommandLine](IMPORTANT): got command configSet list
2018-08-20T16:51:08.280Z,1534783868.280 [CommandLine](IMPORTANT): Listing configuration overrides from Data/persisted.cfg
2018-08-20T16:51:08.283Z,1534783868.283 [CommandLine](IMPORTANT): CTD_NeilBrown.loadAtStartup=0 bool;

2018-08-20T16:51:08.283Z,1534783868.283 [CommandLine](IMPORTANT): CTD_Seabird.loadAtStartup=0 bool;

2018-08-20T16:51:08.565Z,1534783868.565 [MissionManager](IMPORTANT): Started mission Startup
2018-08-20T16:51:08.566Z,1534783868.566 [Startup] Running Loop=1
2018-08-20T16:51:08.566Z,1534783868.566 [Startup](DEBUG): Aggregate::initialize Startup
2018-08-20T16:51:08.566Z,1534783868.566 [Startup:A.GoToSurface] Running Loop=1
2018-08-20T16:51:08.566Z,1534783868.566 [Startup:A.GoToSurface](DEBUG): Initialize GoToSurfaceComponent.
2018-08-20T16:51:08.567Z,1534783868.567 [Startup:A.GoToSurface](DEBUG): No depth rate setting specified. Using default value of nan m/s.
2018-08-20T16:51:08.568Z,1534783868.568 [Startup:A.GoToSurface](DEBUG): No pitch setting specified. Using default value of nan degrees.
2018-08-20T16:51:08.568Z,1534783868.568 [Startup:A.GoToSurface](DEBUG): No speed setting specified. Using default value of 1.000000 m/s.
2018-08-20T16:51:08.577Z,1534783868.577 [Startup:A.GoToSurface](DEBUG): No surface timeout specified. Using default value of 1000.000000 seconds.
2018-08-20T16:51:08.578Z,1534783868.578 [Startup:A.GoToSurface](INFO): Received pitch timeout configuration 60.000000 seconds.
2018-08-20T16:51:08.603Z,1534783868.603 [Startup:StartupSatComms] Running Loop=1
2018-08-20T16:51:08.603Z,1534783868.603 [Startup:StartupSatComms](DEBUG): Aggregate::initialize Startup:StartupSatComms
2018-08-20T16:51:08.604Z,1534783868.604 [Startup:StartupSatComms:A] Running Loop=1
2018-08-20T16:51:08.962Z,1534783868.962 [Startup:StartupSatComms:A](DEBUG): Initialize ReadDataComponent to sense latitude_fix
2018-08-20T16:51:44.029Z,1534783904.029 [Rowe_600LCM](FAULT): Did not receive valid device response within the specified allowable sample time.
2018-08-20T16:51:44.029Z,1534783904.029 [Rowe_600LCM] Communications Fault, FailCount= 1
2018-08-20T16:51:44.029Z,1534783904.029 [Rowe_600LCM](ERROR): Communications Fault
2018-08-20T16:51:44.190Z,1534783904.190 [CBIT](ERROR): Communications Fault in component: Rowe_600LCM
2018-08-20T16:51:44.433Z,1534783904.433 [Rowe_600LCM](INFO): Stopping potential previous instance(s) of roweadcp LCM interface
2018-08-20T16:51:44.750Z,1534783904.750 [Rowe_600LCM](INFO): Powering down
2018-08-20T16:51:48.401Z,1534783908.401 [CBIT](INFO): Clearing failed state for component Rowe_600LCM
2018-08-20T16:51:48.401Z,1534783908.401 [Rowe_600LCM] No Fault, FailCount= 1
2018-08-20T16:51:48.789Z,1534783908.789 [Rowe_600LCM](INFO): Initializing
2018-08-20T16:51:48.790Z,1534783908.790 [Rowe_600LCM](INFO): Checking LCM
2018-08-20T16:51:48.790Z,1534783908.790 [Rowe_600LCM](INFO): LCM OK
2018-08-20T16:51:48.790Z,1534783908.790 [Rowe_600LCM](INFO): Powering up
2018-08-20T16:51:53.022Z,1534783913.022 [Rowe_600LCM](INFO): Stopping potential previous instance(s) of Rowe LCM interface
2018-08-20T16:51:53.083Z,1534783913.083 [Rowe_600LCM](INFO): Started Rowe LCM interface with command:nohup ./lrauv-framework/onboard/bin/roweadcp -ldir /mnt/mmc/LRAUV/Logs/latest/ -dev /dev/ttyB4 -b 9600 >& /dev/null &
2018-08-20T16:51:53.084Z,1534783913.084 [Rowe_600LCM](INFO): LCM subscribed to channel:Rowe_600LCM.adcp_dvl.bottom_track
2018-08-20T16:51:53.085Z,1534783913.085 [Rowe_600LCM](INFO): LCM subscribed to channel:Rowe_600LCM.adcp_dvl.vehicle_water_velocity
2018-08-20T16:51:53.086Z,1534783913.086 [Rowe_600LCM](INFO): LCM subscribed to channel:rowe_dvl.rowe
2018-08-20T16:52:08.885Z,1534783928.885 [Startup:StartupSatComms:A](INFO): Timed out from 2018-08-20T16:51:08.6Z
2018-08-20T16:52:08.885Z,1534783928.885 [Startup:StartupSatComms:A] Stopped
2018-08-20T16:52:08.886Z,1534783928.886 [Startup:StartupSatComms:B] Running Loop=1
2018-08-20T16:52:09.275Z,1534783929.275 [Startup:StartupSatComms:B](DEBUG): Initialize ReadDataComponent to sense platform_communications
2018-08-20T16:52:13.582Z,1534783933.582 [DataOverHttps](INFO): Sending 25 bytes from file Logs/20180817T204544/Courier0004.lzma
2018-08-20T16:52:14.372Z,1534783934.372 [DataOverHttps](INFO): Moved sent file to Logs/20180817T204544/Courier0004.lzma.bak
2018-08-20T16:52:14.372Z,1534783934.372 [DataOverHttps](INFO): SBD MOMSN=8430052
2018-08-20T16:52:23.981Z,1534783943.981 [DataOverHttps](INFO): Sending 702 bytes from file Logs/20180817T204544/Express0001.lzma
2018-08-20T16:52:24.768Z,1534783944.768 [DataOverHttps](INFO): Moved sent file to Logs/20180817T204544/Express0001.lzma.bak
2018-08-20T16:52:24.768Z,1534783944.768 [DataOverHttps](INFO): SBD MOMSN=8430055
2018-08-20T16:52:34.356Z,1534783954.356 [DataOverHttps](INFO): Sending 665 bytes from file Logs/20180817T204544/Express0005.lzma
2018-08-20T16:52:35.124Z,1534783955.124 [DataOverHttps](INFO): Moved sent file to Logs/20180817T204544/Express0005.lzma.bak
2018-08-20T16:52:35.124Z,1534783955.124 [DataOverHttps](INFO): SBD MOMSN=8430070
2018-08-20T16:52:44.817Z,1534783964.817 [DeadReckonUsingSpeedCalculator](ERROR): Will not write estimated position: latitudeAccuracy_ = nan, longitudeAccuracy_ = nan, depthAccuracy_ = nan
2018-08-20T16:52:44.817Z,1534783964.817 [DeadReckonUsingSpeedCalculator] Software Fault, FailCount= 1
2018-08-20T16:52:44.817Z,1534783964.817 [DeadReckonUsingSpeedCalculator](ERROR): Software Fault
2018-08-20T16:52:44.832Z,1534783964.832 [CBIT](ERROR): Software Fault in component: DeadReckonUsingSpeedCalculator
2018-08-20T16:52:44.889Z,1534783964.889 [DataOverHttps](INFO): Sending 690 bytes from file Logs/20180820T164933/Express0001.lzma
2018-08-20T16:52:45.043Z,1534783965.043 [CBIT](INFO): Clearing failed state for component DeadReckonUsingSpeedCalculator
2018-08-20T16:52:45.043Z,1534783965.043 [DeadReckonUsingSpeedCalculator] No Fault, FailCount= 1
2018-08-20T16:52:45.328Z,1534783965.328 [DeadReckonUsingSpeedCalculator](DEBUG): Initializing DeadReckonUsingSpeedCalculator component.
2018-08-20T16:52:45.329Z,1534783965.329 [DeadReckonUsingSpeedCalculator](INFO): Will consider orientation measurement stale after 120s.
2018-08-20T16:52:45.329Z,1534783965.329 [DeadReckonUsingSpeedCalculator](INFO): Will consider velocity measurement stale after 20s.
2018-08-20T16:52:45.644Z,1534783965.644 [DataOverHttps](INFO): Moved sent file to Logs/20180820T164933/Express0001.lzma.bak
2018-08-20T16:52:45.644Z,1534783965.644 [DataOverHttps](INFO): SBD MOMSN=8430089
2018-08-20T16:52:46.446Z,1534783966.446 [Startup:StartupSatComms:B] Stopped
2018-08-20T16:52:46.447Z,1534783966.447 [Startup:StartupSatComms](INFO): Completed Startup:StartupSatComms
2018-08-20T16:52:46.447Z,1534783966.447 [Startup:StartupSatComms] Stopped
2018-08-20T16:52:46.447Z,1534783966.447 [Startup:StartupSatComms](DEBUG): Aggregate::uninitialize Startup:StartupSatComms
2018-08-20T16:52:46.448Z,1534783966.448 [Startup](INFO): Completed Startup
2018-08-20T16:52:46.448Z,1534783966.448 [MissionManager](INFO): Startup is completed.
2018-08-20T16:52:46.449Z,1534783966.449 [MissionManager](INFO): Uninitializing Mission Startup
2018-08-20T16:52:46.449Z,1534783966.449 [Startup] Stopped
2018-08-20T16:52:46.449Z,1534783966.449 [Startup](DEBUG): Aggregate::uninitialize Startup
2018-08-20T16:52:46.449Z,1534783966.449 [Startup:A.GoToSurface] Stopped
2018-08-20T16:52:46.449Z,1534783966.449 [Startup:A.GoToSurface](DEBUG): Uninitialize GoToSurfaceComponent.
2018-08-20T16:52:46.618Z,1534783966.618 [MissionManager](IMPORTANT): Started mission Default
2018-08-20T16:52:46.618Z,1534783966.618 [Default] Running Loop=1
2018-08-20T16:52:46.619Z,1534783966.619 [Default](DEBUG): Aggregate::initialize Default
2018-08-20T16:52:46.619Z,1534783966.619 [Default:B.GoToSurface] Running Loop=1
2018-08-20T16:52:46.619Z,1534783966.619 [Default:B.GoToSurface](DEBUG): Initialize GoToSurfaceComponent.
2018-08-20T16:52:46.619Z,1534783966.619 [Default:B.GoToSurface](DEBUG): No depth rate setting specified. Using default value of nan m/s.
2018-08-20T16:52:46.620Z,1534783966.620 [Default:B.GoToSurface](DEBUG): No pitch setting specified. Using default value of nan degrees.
2018-08-20T16:52:46.620Z,1534783966.620 [Default:B.GoToSurface](DEBUG): No speed setting specified. Using default value of 1.000000 m/s.
2018-08-20T16:52:46.620Z,1534783966.620 [Default:B.GoToSurface](DEBUG): No surface timeout specified. Using default value of 1000.000000 seconds.
2018-08-20T16:52:46.625Z,1534783966.625 [Default:B.GoToSurface](INFO): Received pitch timeout configuration 60.000000 seconds.
2018-08-20T16:52:46.626Z,1534783966.626 [Default:A.Wait] Running Loop=1
2018-08-20T16:52:46.626Z,1534783966.626 [Default:A.Wait](DEBUG): Initialize Wait Component.
2018-08-20T16:52:59.723Z,1534783979.723 [Default:A.Wait](INFO): Done Waiting.
2018-08-20T16:52:59.723Z,1534783979.723 [Default:A.Wait] Stopped
2018-08-20T16:52:59.723Z,1534783979.723 [Default:A.Wait](DEBUG): Uninitialize Wait Component.
2018-08-20T16:53:00.145Z,1534783980.145 [Default:CheckIn] Running Loop=1
2018-08-20T16:53:00.145Z,1534783980.145 [Default:CheckIn](DEBUG): Aggregate::initialize Default:CheckIn
2018-08-20T16:53:00.145Z,1534783980.145 [Default:CheckIn:Read_GPS] Running Loop=1
2018-08-20T16:53:00.538Z,1534783980.538 [Default:CheckIn:Read_GPS](DEBUG): Initialize ReadDataComponent to sense time_fix
2018-08-20T16:53:30.711Z,1534784010.711 [CommandLine](IMPORTANT): got command restart system
2018-08-20T16:53:33.217Z,1534784013.217 [Supervisor](INFO): Stop Mission called by Supervisor::terminate
2018-08-20T16:53:33.221Z,1534784013.221 [CommandLine ThreadHandler](INFO): Uninitializing protected caller thread.
2018-08-20T16:53:33.222Z,1534784013.222 [CommandLine ThreadHandler](INFO): Thread cancelled.
2018-08-20T16:53:33.321Z,1534784013.321 [Supervisor](DEBUG): Uninitializing supervisor and starting cleanup.  Bye!
2018-08-20T16:53:33.321Z,1534784013.321 [CommandLine ThreadHandler](INFO): Thread cancelled.
2018-08-20T16:53:33.322Z,1534784013.322 [CommandLine](INFO): Join timeout helper Thread ID is 1388
2018-08-20T16:53:33.323Z,1534784013.323 [ComponentRegistry](INFO): Shutting down NavChartDb ThreadHandler
2018-08-20T16:53:33.323Z,1534784013.323 [NavChartDb ThreadHandler](INFO): Thread cancelled.
2018-08-20T16:53:33.323Z,1534784013.323 [NavChartDb](INFO): Join timeout helper Thread ID is 1389
2018-08-20T16:53:33.593Z,1534784013.593 [NavChartDb ThreadHandler](INFO): Uninitializing protected caller thread.
2018-08-20T16:53:33.593Z,1534784013.593 [NavChartDb ThreadHandler](INFO): Thread cancelled.
2018-08-20T16:53:33.597Z,1534784013.597 [ComponentRegistry](INFO): Shutting down WetLabsBB2FL ThreadHandler
2018-08-20T16:53:33.597Z,1534784013.597 [WetLabsBB2FL ThreadHandler](INFO): Thread cancelled.
2018-08-20T16:53:33.597Z,1534784013.597 [WetLabsBB2FL](INFO): Join timeout helper Thread ID is 1390
2018-08-20T16:53:33.937Z,1534784013.937 [WetLabsBB2FL ThreadHandler](INFO): Uninitializing protected caller thread.
2018-08-20T16:53:33.937Z,1534784013.937 [WetLabsBB2FL](INFO): Powering down
2018-08-20T16:53:33.938Z,1534784013.938 [WetLabsBB2FL ThreadHandler](INFO): Thread cancelled.
2018-08-20T16:53:33.945Z,1534784013.945 [ComponentRegistry](INFO): Shutting down Rowe_600LCM ThreadHandler
2018-08-20T16:53:33.945Z,1534784013.945 [Rowe_600LCM ThreadHandler](INFO): Thread cancelled.
2018-08-20T16:53:33.946Z,1534784013.946 [Rowe_600LCM](INFO): Join timeout helper Thread ID is 1391
2018-08-20T16:53:34.581Z,1534784014.581 [Rowe_600LCM ThreadHandler](INFO): Uninitializing protected caller thread.
2018-08-20T16:53:34.581Z,1534784014.581 [Rowe_600LCM](INFO): Stopping potential previous instance(s) of roweadcp LCM interface
2018-08-20T16:53:34.698Z,1534784014.698 [Rowe_600LCM](INFO): Powering down
2018-08-20T16:53:34.699Z,1534784014.699 [Rowe_600LCM ThreadHandler](INFO): Thread cancelled.
2018-08-20T16:53:34.705Z,1534784014.705 [ComponentRegistry](INFO): Shutting down Radio_Surface ThreadHandler
2018-08-20T16:53:34.705Z,1534784014.705 [Radio_Surface ThreadHandler](INFO): Thread cancelled.
2018-08-20T16:53:34.705Z,1534784014.705 [Radio_Surface](INFO): Join timeout helper Thread ID is 1393
2018-08-20T16:53:34.753Z,1534784014.753 [Radio_Surface ThreadHandler](INFO): Uninitializing protected caller thread.
2018-08-20T16:53:34.754Z,1534784014.754 [Radio_Surface ThreadHandler](INFO): Thread cancelled.
2018-08-20T16:53:34.766Z,1534784014.766 [ComponentRegistry](INFO): Shutting down logger ThreadHandler
2018-08-20T16:53:34.766Z,1534784014.766 [logger ThreadHandler](INFO): Thread cancelled.
2018-08-20T16:53:34.767Z,1534784014.767 [logger](INFO): Join timeout helper Thread ID is 1394
2018-08-20T16:53:34.781Z,1534784014.781 [logger ThreadHandler](INFO): Uninitializing protected caller thread.
2018-08-20T16:53:34.781Z,1534784014.781 [logger ThreadHandler](INFO): Thread cancelled.
2018-08-20T16:53:34.786Z,1534784014.786 [ComponentRegistry](INFO): Shutting down CommandLine ThreadHandler
2018-08-20T16:53:34.786Z,1534784014.786 [CommandLine ThreadHandler](INFO): Thread cancelled.
2018-08-20T16:53:34.786Z,1534784014.786 [ComponentRegistry](INFO): Shutting down controlThread ThreadHandler
2018-08-20T16:53:34.786Z,1534784014.786 [controlThread ThreadHandler](INFO): Thread cancelled.
2018-08-20T16:53:34.786Z,1534784014.786 [controlThread](INFO): Join timeout helper Thread ID is 1395
2018-08-20T16:53:34.845Z,1534784014.845 [controlThread ThreadHandler](INFO): Uninitializing protected caller thread.
2018-08-20T16:53:34.845Z,1534784014.845 [controlThread](DEBUG): Uninitializing ControlThread
2018-08-20T16:53:34.847Z,1534784014.847 [NAL9602](INFO): Powering down
2018-08-20T16:53:34.848Z,1534784014.848 [PNI_TCM](INFO): Powering down
2018-08-20T16:53:34.938Z,1534784014.938 [Aanderaa_O2](INFO): Powering down
2018-08-20T16:53:34.939Z,1534784014.939 [DepthRateCalculator](DEBUG): Initializing DepthRateCalculator.
2018-08-20T16:53:34.941Z,1534784014.941 [ElevatorOffsetCalculator](DEBUG): Uninitializing ElevatorOffsetCalculator.
2018-08-20T16:53:34.942Z,1534784014.942 [NavChart](DEBUG): Uninitialize NavChart Navigation.
2018-08-20T16:53:34.942Z,1534784014.942 [MissionManager](INFO): Uninitializing Mission Default
2018-08-20T16:53:34.942Z,1534784014.942 [Default] Stopped
2018-08-20T16:53:34.943Z,1534784014.943 [Default](DEBUG): Aggregate::uninitialize Default
2018-08-20T16:53:34.943Z,1534784014.943 [Default:B.GoToSurface] Stopped
2018-08-20T16:53:34.943Z,1534784014.943 [Default:B.GoToSurface](DEBUG): Uninitialize GoToSurfaceComponent.
2018-08-20T16:53:34.943Z,1534784014.943 [Default:CheckIn] Stopped
2018-08-20T16:53:34.943Z,1534784014.943 [Default:CheckIn](DEBUG): Aggregate::uninitialize Default:CheckIn
2018-08-20T16:53:34.943Z,1534784014.943 [Default:CheckIn:Read_GPS] Stopped
2018-08-20T16:53:34.947Z,1534784014.947 [VerticalControl](DEBUG): Uninitialize VerticalControlComponent.
2018-08-20T16:53:34.948Z,1534784014.948 [HorizontalControl](DEBUG): Uninitialize HorizontalControlComponent.
2018-08-20T16:53:34.948Z,1534784014.948 [SpeedControl](DEBUG): Uninitialize SpeedControlComponent.
2018-08-20T16:53:34.948Z,1534784014.948 [LoopControl](DEBUG): Uninitialize LoopControlComponent.
2018-08-20T16:53:34.949Z,1534784014.949 [BuoyancyServo](DEBUG): Uninitialize Buoyancy Servo.
2018-08-20T16:53:34.949Z,1534784014.949 [BuoyancyServo](INFO): Powering down
2018-08-20T16:53:34.961Z,1534784014.961 [ElevatorServo](DEBUG): Uninitialize Elevator Servo.
2018-08-20T16:53:34.961Z,1534784014.961 [ElevatorServo](INFO): Powering down
2018-08-20T16:53:34.962Z,1534784014.962 [MassServo](DEBUG): Uninitialize Mass Servo.
2018-08-20T16:53:34.962Z,1534784014.962 [MassServo](INFO): Powering down
2018-08-20T16:53:34.963Z,1534784014.963 [RudderServo](DEBUG): Uninitialize Rudder Servo.
2018-08-20T16:53:34.964Z,1534784014.964 [RudderServo](INFO): Powering down
2018-08-20T16:53:34.965Z,1534784014.965 [ThrusterServo](DEBUG): Uninitialize Thruster Servo.
2018-08-20T16:53:34.965Z,1534784014.965 [ThrusterServo](INFO): Powering down
2018-08-20T16:53:34.966Z,1534784014.966 [SBIT](DEBUG): Uninitialize SBIT Component.
2018-08-20T16:53:34.966Z,1534784014.966 [IBIT](DEBUG): Uninitialize IBIT Component.
2018-08-20T16:53:34.967Z,1534784014.967 [CBIT](DEBUG): Uninitialize CBIT Component.
2018-08-20T16:53:34.968Z,1534784014.968 [controlThread ThreadHandler](INFO): Thread cancelled.
2018-08-20T16:53:35.100Z,1534784015.100 [Rowe_600LCM ThreadHandler](INFO): Thread cancelled.
2018-08-20T16:53:35.108Z,1534784015.108 [Radio_Surface ThreadHandler](INFO): Thread cancelled.
2018-08-20T16:53:35.151Z,1534784015.151 [WetLabsBB2FL ThreadHandler](INFO): Thread cancelled.
2018-08-20T16:53:35.182Z,1534784015.182 [NavChartDb ThreadHandler](INFO): Thread cancelled.
2018-08-20T16:53:35.246Z,1534784015.246 [logger ThreadHandler](INFO): Thread cancelled.