2018-07-13T18:20:09.634Z,1531506009.634 [Supervisor](DEBUG): Initializing supervisor.
2018-07-13T18:20:09.636Z,1531506009.636 [SyncHandler](DEBUG): Created PCaller Thread at 404514E0
2018-07-13T18:20:09.637Z,1531506009.637 [SyncHandler](INFO): Protected caller Thread ID is 797
2018-07-13T18:20:09.637Z,1531506009.637 [ComponentRegistry](DEBUG): Component "controlThread" handled in its own thread.
2018-07-13T18:20:09.638Z,1531506009.638 [controlThread ThreadHandler](DEBUG): Created PCaller Thread at 404814E0
2018-07-13T18:20:09.639Z,1531506009.639 [controlThread ThreadHandler](INFO): Protected caller Thread ID is 798
2018-07-13T18:20:09.641Z,1531506009.641 [ComponentRegistry](DEBUG): SyncComponent "CycleStarter" handled in the control thread.
2018-07-13T18:20:09.653Z,1531506009.653 [ComponentRegistry](DEBUG): Component "CommandLine" handled in its own thread.
2018-07-13T18:20:09.654Z,1531506009.654 [CommandLine ThreadHandler](DEBUG): Created PCaller Thread at 404B14E0
2018-07-13T18:20:09.654Z,1531506009.654 [CommandLine ThreadHandler](INFO): Protected caller Thread ID is 799
2018-07-13T18:20:09.655Z,1531506009.655 [ComponentRegistry](DEBUG): Component "logger" handled in its own thread.
2018-07-13T18:20:09.656Z,1531506009.656 [logger ThreadHandler](DEBUG): Created PCaller Thread at 404E14E0
2018-07-13T18:20:09.656Z,1531506009.656 [logger ThreadHandler](INFO): Protected caller Thread ID is 800
2018-07-13T18:20:09.658Z,1531506009.658 [ComponentRegistry](DEBUG): SyncComponent "LogSplitter" handled in the control thread.
2018-07-13T18:20:09.659Z,1531506009.659 [Supervisor](INFO): Looking for Config files in directory: Config/
2018-07-13T18:20:09.663Z,1531506009.663 [Supervisor](INFO): Opening Config file at: Config/Control.cfg
2018-07-13T18:20:10.007Z,1531506010.007 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Control
2018-07-13T18:20:10.009Z,1531506010.009 [Supervisor](INFO): Opening Config file at: Config/logger.cfg
2018-07-13T18:20:10.216Z,1531506010.216 [ComponentRegistry](DEBUG): Loaded Config Component "Config/logger
2018-07-13T18:20:10.217Z,1531506010.217 [Supervisor](INFO): Opening Config file at: Config/Servo.cfg
2018-07-13T18:20:10.516Z,1531506010.516 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Servo
2018-07-13T18:20:10.518Z,1531506010.518 [Supervisor](INFO): Opening Config file at: Config/Derivation.cfg
2018-07-13T18:20:10.664Z,1531506010.664 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Derivation
2018-07-13T18:20:10.664Z,1531506010.664 [Supervisor](INFO): Opening Config file at: Config/Sample.cfg
2018-07-13T18:20:10.764Z,1531506010.764 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Sample
2018-07-13T18:20:10.764Z,1531506010.764 [Supervisor](INFO): Opening Config file at: Config/Simulator.cfg
2018-07-13T18:20:11.265Z,1531506011.265 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Simulator
2018-07-13T18:20:11.267Z,1531506011.267 [Supervisor](INFO): Opening Config file at: Config/Sensor.cfg
2018-07-13T18:20:11.667Z,1531506011.667 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Sensor
2018-07-13T18:20:11.669Z,1531506011.669 [Supervisor](INFO): Opening Config file at: Config/vehicle.cfg
2018-07-13T18:20:12.130Z,1531506012.130 [ComponentRegistry](DEBUG): Loaded Config Component "Config/vehicle
2018-07-13T18:20:12.132Z,1531506012.132 [Supervisor](INFO): Opening Config file at: Config/workSite.cfg
2018-07-13T18:20:12.238Z,1531506012.238 [ComponentRegistry](DEBUG): Loaded Config Component "Config/workSite
2018-07-13T18:20:12.239Z,1531506012.239 [Supervisor](INFO): Opening Config file at: Config/secure.cfg
2018-07-13T18:20:12.338Z,1531506012.338 [ComponentRegistry](DEBUG): Loaded Config Component "Config/secure
2018-07-13T18:20:12.338Z,1531506012.338 [Supervisor](INFO): Opening Config file at: Config/Navigation.cfg
2018-07-13T18:20:12.549Z,1531506012.549 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Navigation
2018-07-13T18:20:12.549Z,1531506012.549 [Supervisor](INFO): Opening Config file at: Config/BIT.cfg
2018-07-13T18:20:12.764Z,1531506012.764 [ComponentRegistry](DEBUG): Loaded Config Component "Config/BIT
2018-07-13T18:20:12.765Z,1531506012.765 [Supervisor](INFO): Opening Config file at: Config/Science.cfg
2018-07-13T18:20:13.124Z,1531506013.124 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Science
2018-07-13T18:20:13.125Z,1531506013.125 [Supervisor](INFO): Opening Config file at: Config/Estimation.cfg
2018-07-13T18:20:13.269Z,1531506013.269 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Estimation
2018-07-13T18:20:13.269Z,1531506013.269 [Supervisor](INFO): Opening Config file at: Config/Guidance.cfg
2018-07-13T18:20:13.358Z,1531506013.358 [Supervisor](INFO): Looking for Config files in directory: Config/lrauv-daphne/
2018-07-13T18:20:14.281Z,1531506014.281 [Supervisor](INFO): Opening Config file at: Config/lrauv-daphne/Control.cfg
2018-07-13T18:20:14.391Z,1531506014.391 [Supervisor](INFO): Opening Config file at: Config/lrauv-daphne/logger.cfg
2018-07-13T18:20:14.515Z,1531506014.515 [Supervisor](INFO): Opening Config file at: Config/lrauv-daphne/Servo.cfg
2018-07-13T18:20:14.613Z,1531506014.613 [Supervisor](INFO): Opening Config file at: Config/lrauv-daphne/Simulator.cfg
2018-07-13T18:20:14.700Z,1531506014.700 [Supervisor](INFO): Opening Config file at: Config/lrauv-daphne/Sensor.cfg
2018-07-13T18:20:14.862Z,1531506014.862 [Supervisor](INFO): Opening Config file at: Config/lrauv-daphne/vehicle.cfg
2018-07-13T18:20:15.052Z,1531506015.052 [Supervisor](INFO): Opening Config file at: Config/lrauv-daphne/workSite.cfg
2018-07-13T18:20:15.129Z,1531506015.129 [Supervisor](INFO): Opening Config file at: Config/lrauv-daphne/Battery.cfg
2018-07-13T18:20:15.365Z,1531506015.365 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Battery
2018-07-13T18:20:15.365Z,1531506015.365 [Supervisor](INFO): Opening Config file at: Config/lrauv-daphne/secure.cfg
2018-07-13T18:20:15.449Z,1531506015.449 [Supervisor](INFO): Opening Config file at: Config/lrauv-daphne/Navigation.cfg
2018-07-13T18:20:15.540Z,1531506015.540 [Supervisor](INFO): Opening Config file at: Config/lrauv-daphne/BIT.cfg
2018-07-13T18:20:15.642Z,1531506015.642 [Supervisor](INFO): Opening Config file at: Config/lrauv-daphne/Science.cfg
2018-07-13T18:20:15.770Z,1531506015.770 [Supervisor](FAULT): Ignoring configuration overrides from Data/persisted.cfg
2018-07-13T18:20:15.774Z,1531506015.774 [Module Loader](DEBUG): Loading Module at Modules/Guidance.so
2018-07-13T18:20:16.056Z,1531506016.056 [Module Loader](DEBUG): Loaded Module: Guidance (Contains behaviors and commands)
2018-07-13T18:20:16.057Z,1531506016.057 [Module Loader](DEBUG): Loading Module at Modules/Derivation.so
2018-07-13T18:20:16.113Z,1531506016.113 [DepthRateCalculator] Loaded
2018-07-13T18:20:16.114Z,1531506016.114 [ComponentRegistry](DEBUG): SyncComponent "DepthRateCalculator" handled in the control thread.
2018-07-13T18:20:16.119Z,1531506016.119 [PitchRateCalculator] Loaded
2018-07-13T18:20:16.120Z,1531506016.120 [ComponentRegistry](DEBUG): SyncComponent "PitchRateCalculator" handled in the control thread.
2018-07-13T18:20:16.136Z,1531506016.136 [SpeedCalculator] Loaded
2018-07-13T18:20:16.136Z,1531506016.136 [ComponentRegistry](DEBUG): SyncComponent "SpeedCalculator" handled in the control thread.
2018-07-13T18:20:16.157Z,1531506016.157 [TempGradientCalculator] Loaded
2018-07-13T18:20:16.158Z,1531506016.158 [ComponentRegistry](DEBUG): SyncComponent "TempGradientCalculator" handled in the control thread.
2018-07-13T18:20:16.173Z,1531506016.173 [VerticalTemperatureHomogeneityIndexCalculator] Loaded
2018-07-13T18:20:16.174Z,1531506016.174 [ComponentRegistry](DEBUG): SyncComponent "VerticalTemperatureHomogeneityIndexCalculator" handled in the control thread.
2018-07-13T18:20:16.179Z,1531506016.179 [YawRateCalculator] Loaded
2018-07-13T18:20:16.180Z,1531506016.180 [ComponentRegistry](DEBUG): SyncComponent "YawRateCalculator" handled in the control thread.
2018-07-13T18:20:16.219Z,1531506016.219 [ElevatorOffsetCalculator] Loaded
2018-07-13T18:20:16.220Z,1531506016.220 [ComponentRegistry](DEBUG): SyncComponent "ElevatorOffsetCalculator" handled in the control thread.
2018-07-13T18:20:16.220Z,1531506016.220 [Module Loader](DEBUG): Loaded Module: Derivation (Contains the base derivation components)
2018-07-13T18:20:16.221Z,1531506016.221 [Module Loader](DEBUG): Loading Module at Modules/Estimation.so
2018-07-13T18:20:16.341Z,1531506016.341 [StratificationFrontDetector](INFO): threshold set to: 0.399988 degC
2018-07-13T18:20:16.341Z,1531506016.341 [StratificationFrontDetector](DEBUG): (re)initializing
2018-07-13T18:20:16.342Z,1531506016.342 [StratificationFrontDetector] Loaded
2018-07-13T18:20:16.342Z,1531506016.342 [ComponentRegistry](DEBUG): SyncComponent "StratificationFrontDetector" handled in the control thread.
2018-07-13T18:20:16.342Z,1531506016.342 [Module Loader](DEBUG): Loaded Module: Estimation (Contains the base estimation components)
2018-07-13T18:20:16.343Z,1531506016.343 [Module Loader](DEBUG): Loading Module at Modules/Servo.so
2018-07-13T18:20:16.478Z,1531506016.478 [BuoyancyServo] Loaded
2018-07-13T18:20:16.478Z,1531506016.478 [ComponentRegistry](DEBUG): SyncComponent "BuoyancyServo" handled in the control thread.
2018-07-13T18:20:16.493Z,1531506016.493 [ElevatorServo] Loaded
2018-07-13T18:20:16.494Z,1531506016.494 [ComponentRegistry](DEBUG): SyncComponent "ElevatorServo" handled in the control thread.
2018-07-13T18:20:16.508Z,1531506016.508 [MassServo] Loaded
2018-07-13T18:20:16.508Z,1531506016.508 [ComponentRegistry](DEBUG): SyncComponent "MassServo" handled in the control thread.
2018-07-13T18:20:16.524Z,1531506016.524 [RudderServo] Loaded
2018-07-13T18:20:16.524Z,1531506016.524 [ComponentRegistry](DEBUG): SyncComponent "RudderServo" handled in the control thread.
2018-07-13T18:20:16.539Z,1531506016.539 [ThrusterServo] Loaded
2018-07-13T18:20:16.539Z,1531506016.539 [ComponentRegistry](DEBUG): SyncComponent "ThrusterServo" handled in the control thread.
2018-07-13T18:20:16.539Z,1531506016.539 [Module Loader](DEBUG): Loaded Module: Servo (This is the module containing motor controllers)
2018-07-13T18:20:16.540Z,1531506016.540 [Module Loader](DEBUG): Loading Module at Modules/Sample.so
2018-07-13T18:20:16.564Z,1531506016.564 [Module Loader](DEBUG): Loaded Module: Sample (This is a Sample Module of Sample Components)
2018-07-13T18:20:16.565Z,1531506016.565 [Module Loader](DEBUG): Loading Module at Modules/Simulator.so
2018-07-13T18:20:16.690Z,1531506016.690 [Module Loader](DEBUG): Loaded Module: Simulator (This is the module containing the Simulator)
2018-07-13T18:20:16.691Z,1531506016.691 [Module Loader](DEBUG): Loading Module at Modules/Sensor.so
2018-07-13T18:20:17.249Z,1531506017.249 [DataOverHttps] Loaded
2018-07-13T18:20:17.250Z,1531506017.250 [ComponentRegistry](DEBUG): SyncComponent "DataOverHttps" handled in the control thread.
2018-07-13T18:20:17.263Z,1531506017.263 [Depth_Keller] Loaded
2018-07-13T18:20:17.263Z,1531506017.263 [ComponentRegistry](DEBUG): SyncComponent "Depth_Keller" handled in the control thread.
2018-07-13T18:20:17.268Z,1531506017.268 [DropWeight] Loaded
2018-07-13T18:20:17.268Z,1531506017.268 [ComponentRegistry](DEBUG): SyncComponent "DropWeight" handled in the control thread.
2018-07-13T18:20:17.367Z,1531506017.367 [NAL9602] Loaded
2018-07-13T18:20:17.367Z,1531506017.367 [ComponentRegistry](DEBUG): SyncComponent "NAL9602" handled in the control thread.
2018-07-13T18:20:17.383Z,1531506017.383 [Onboard] Loaded
2018-07-13T18:20:17.383Z,1531506017.383 [ComponentRegistry](DEBUG): SyncComponent "Onboard" handled in the control thread.
2018-07-13T18:20:17.393Z,1531506017.393 [Radio_Surface] Loaded
2018-07-13T18:20:17.393Z,1531506017.393 [ComponentRegistry](DEBUG): Component "Radio_Surface" handled in its own thread.
2018-07-13T18:20:17.394Z,1531506017.394 [Radio_Surface ThreadHandler](DEBUG): Created PCaller Thread at 408844E0
2018-07-13T18:20:17.395Z,1531506017.395 [Radio_Surface ThreadHandler](INFO): Protected caller Thread ID is 882
2018-07-13T18:20:17.548Z,1531506017.548 [PNI_TCM] Loaded
2018-07-13T18:20:17.548Z,1531506017.548 [ComponentRegistry](DEBUG): SyncComponent "PNI_TCM" handled in the control thread.
2018-07-13T18:20:17.609Z,1531506017.609 [Rowe_600LCM] Loaded
2018-07-13T18:20:17.610Z,1531506017.610 [ComponentRegistry](DEBUG): Component "Rowe_600LCM" handled in its own thread.
2018-07-13T18:20:17.611Z,1531506017.611 [Rowe_600LCM ThreadHandler](DEBUG): Created PCaller Thread at 408B44E0
2018-07-13T18:20:17.611Z,1531506017.611 [Rowe_600LCM ThreadHandler](INFO): Protected caller Thread ID is 883
2018-07-13T18:20:19.903Z,1531506019.903 [BPC1] Loaded
2018-07-13T18:20:19.903Z,1531506019.903 [ComponentRegistry](DEBUG): SyncComponent "BPC1" handled in the control thread.
2018-07-13T18:20:19.904Z,1531506019.904 [Module Loader](DEBUG): Loaded Module: Sensor (Contains the sensor components)
2018-07-13T18:20:19.904Z,1531506019.904 [Module Loader](DEBUG): Loading Module at Modules/BIT.so
2018-07-13T18:20:20.062Z,1531506020.062 [SBIT](DEBUG): Construct Startup Built In Test.
2018-07-13T18:20:20.084Z,1531506020.084 [SBIT] Loaded
2018-07-13T18:20:20.084Z,1531506020.084 [ComponentRegistry](DEBUG): SyncComponent "SBIT" handled in the control thread.
2018-07-13T18:20:20.085Z,1531506020.085 [IBIT](DEBUG): Construct Initiated Built In Test.
2018-07-13T18:20:20.096Z,1531506020.096 [IBIT] Loaded
2018-07-13T18:20:20.097Z,1531506020.097 [ComponentRegistry](DEBUG): SyncComponent "IBIT" handled in the control thread.
2018-07-13T18:20:20.100Z,1531506020.100 [CBIT](DEBUG): Construct Continuous Built In Test.
2018-07-13T18:20:20.250Z,1531506020.250 [CBIT] Loaded
2018-07-13T18:20:20.251Z,1531506020.251 [ComponentRegistry](DEBUG): SyncComponent "CBIT" handled in the control thread.
2018-07-13T18:20:20.251Z,1531506020.251 [Module Loader](DEBUG): Loaded Module: BIT (Contains the BuiltInTest components, such as C Built In Test)
2018-07-13T18:20:20.252Z,1531506020.252 [Module Loader](DEBUG): Loading Module at Modules/Science.so
2018-07-13T18:20:20.439Z,1531506020.439 [Aanderaa_O2] Loaded
2018-07-13T18:20:20.439Z,1531506020.439 [ComponentRegistry](DEBUG): SyncComponent "Aanderaa_O2" handled in the control thread.
2018-07-13T18:20:20.517Z,1531506020.517 [CTD_NeilBrown] Loaded
2018-07-13T18:20:20.518Z,1531506020.518 [ComponentRegistry](DEBUG): Component "CTD_NeilBrown" handled in its own thread.
2018-07-13T18:20:20.519Z,1531506020.519 [CTD_NeilBrown ThreadHandler](DEBUG): Created PCaller Thread at 409754E0
2018-07-13T18:20:20.519Z,1531506020.519 [CTD_NeilBrown ThreadHandler](INFO): Protected caller Thread ID is 884
2018-07-13T18:20:20.566Z,1531506020.566 [CTD_Seabird] Loaded
2018-07-13T18:20:20.566Z,1531506020.566 [ComponentRegistry](DEBUG): Component "CTD_Seabird" handled in its own thread.
2018-07-13T18:20:20.567Z,1531506020.567 [CTD_Seabird ThreadHandler](DEBUG): Created PCaller Thread at 409A54E0
2018-07-13T18:20:20.567Z,1531506020.567 [CTD_Seabird ThreadHandler](INFO): Protected caller Thread ID is 885
2018-07-13T18:20:20.582Z,1531506020.582 [PAR_Licor] Loaded
2018-07-13T18:20:20.582Z,1531506020.582 [ComponentRegistry](DEBUG): SyncComponent "PAR_Licor" handled in the control thread.
2018-07-13T18:20:20.632Z,1531506020.632 [WetLabsBB2FL] Loaded
2018-07-13T18:20:20.632Z,1531506020.632 [ComponentRegistry](DEBUG): Component "WetLabsBB2FL" handled in its own thread.
2018-07-13T18:20:20.633Z,1531506020.633 [WetLabsBB2FL ThreadHandler](DEBUG): Created PCaller Thread at 409D54E0
2018-07-13T18:20:20.634Z,1531506020.634 [WetLabsBB2FL ThreadHandler](INFO): Protected caller Thread ID is 886
2018-07-13T18:20:20.634Z,1531506020.634 [Module Loader](DEBUG): Loaded Module: Science (Contains the science components)
2018-07-13T18:20:20.635Z,1531506020.635 [Module Loader](DEBUG): Loading Module at Modules/Control.so
2018-07-13T18:20:20.723Z,1531506020.723 [VerticalControl](DEBUG): Construct VerticalControl.
2018-07-13T18:20:20.808Z,1531506020.808 [VerticalControl] Loaded
2018-07-13T18:20:20.808Z,1531506020.808 [ComponentRegistry](DEBUG): SyncComponent "VerticalControl" handled in the control thread.
2018-07-13T18:20:20.809Z,1531506020.809 [HorizontalControl](DEBUG): Construct HorizontalControl.
2018-07-13T18:20:20.867Z,1531506020.867 [HorizontalControl] Loaded
2018-07-13T18:20:20.867Z,1531506020.867 [ComponentRegistry](DEBUG): SyncComponent "HorizontalControl" handled in the control thread.
2018-07-13T18:20:20.868Z,1531506020.868 [SpeedControl](DEBUG): Construct SpeedControl.
2018-07-13T18:20:20.870Z,1531506020.870 [SpeedControl] Loaded
2018-07-13T18:20:20.870Z,1531506020.870 [ComponentRegistry](DEBUG): SyncComponent "SpeedControl" handled in the control thread.
2018-07-13T18:20:20.870Z,1531506020.870 [LoopControl](DEBUG): Construct LoopControl.
2018-07-13T18:20:20.871Z,1531506020.871 [LoopControl] Loaded
2018-07-13T18:20:20.871Z,1531506020.871 [ComponentRegistry](DEBUG): SyncComponent "LoopControl" handled in the control thread.
2018-07-13T18:20:20.872Z,1531506020.872 [Module Loader](DEBUG): Loaded Module: Control (Contains the Control components, such as Depth, Heading, and Speed Control)
2018-07-13T18:20:20.872Z,1531506020.872 [Module Loader](DEBUG): Loading Module at Modules/Trigger.so
2018-07-13T18:20:20.909Z,1531506020.909 [Module Loader](DEBUG): Loaded Module: Trigger (Contains triggers for use in missions)
2018-07-13T18:20:20.910Z,1531506020.910 [Module Loader](DEBUG): Loading Module at Modules/Navigation.so
2018-07-13T18:20:21.018Z,1531506021.018 [DeadReckonUsingSpeedCalculator] Loaded
2018-07-13T18:20:21.018Z,1531506021.018 [ComponentRegistry](DEBUG): SyncComponent "DeadReckonUsingSpeedCalculator" handled in the control thread.
2018-07-13T18:20:21.035Z,1531506021.035 [NavChart] Loaded
2018-07-13T18:20:21.035Z,1531506021.035 [ComponentRegistry](DEBUG): SyncComponent "NavChart" handled in the control thread.
2018-07-13T18:20:21.039Z,1531506021.039 [UniversalFixResidualReporter] Loaded
2018-07-13T18:20:21.039Z,1531506021.039 [ComponentRegistry](DEBUG): SyncComponent "UniversalFixResidualReporter" handled in the control thread.
2018-07-13T18:20:21.040Z,1531506021.040 [Module Loader](DEBUG): Loaded Module: Navigation (Contains the base navigation components)
2018-07-13T18:20:21.043Z,1531506021.043 [ComponentRegistry](DEBUG): SyncComponent "MissionManager" handled in the control thread.
2018-07-13T18:20:21.044Z,1531506021.044 [ComponentRegistry](DEBUG): SyncComponent "Reporter" handled in the control thread.
2018-07-13T18:20:21.051Z,1531506021.051 [ComponentRegistry](DEBUG): Component "NavChartDb" handled in its own thread.
2018-07-13T18:20:21.052Z,1531506021.052 [NavChartDb ThreadHandler](DEBUG): Created PCaller Thread at 40A614E0
2018-07-13T18:20:21.053Z,1531506021.053 [NavChartDb ThreadHandler](INFO): Protected caller Thread ID is 887
2018-07-13T18:20:21.057Z,1531506021.057 [Supervisor](INFO): Main Thread ID is 796
2018-07-13T18:20:21.057Z,1531506021.057 [Supervisor](DEBUG): Running supervisor.
2018-07-13T18:20:21.058Z,1531506021.058 [CommandLine ThreadHandler](INFO): Handler Thread ID is 888
2018-07-13T18:20:21.060Z,1531506021.060 [controlThread ThreadHandler](INFO): Handler Thread ID is 889
2018-07-13T18:20:21.061Z,1531506021.061 [controlThread](DEBUG): Initializing ControlThread
2018-07-13T18:20:21.061Z,1531506021.061 [DepthRateCalculator](DEBUG): Initializing DepthRateCalculator.
2018-07-13T18:20:21.062Z,1531506021.062 [PitchRateCalculator](DEBUG): Initializing PitchRateCalculator.
2018-07-13T18:20:21.062Z,1531506021.062 [SpeedCalculator](DEBUG): Initializing SpeedCalculator.
2018-07-13T18:20:21.063Z,1531506021.063 [TempGradientCalculator](DEBUG): Initializing TempGradientCalculator.
2018-07-13T18:20:21.063Z,1531506021.063 [VerticalTemperatureHomogeneityIndexCalculator](DEBUG): (re)initializing
2018-07-13T18:20:21.064Z,1531506021.064 [YawRateCalculator](DEBUG): Initializing YawRateCalculator.
2018-07-13T18:20:21.064Z,1531506021.064 [ElevatorOffsetCalculator](DEBUG): Initializing ElevatorOffsetCalculator.
2018-07-13T18:20:21.071Z,1531506021.071 [SBIT](INFO): Initialize SBIT Component.
2018-07-13T18:20:21.072Z,1531506021.072 [SBIT](IMPORTANT): git: 2018-06-03
2018-07-13T18:20:21.072Z,1531506021.072 [SBIT](INFO): git hash: e89e4219fcae2edd415aee450018ea5d8b44159b
2018-07-13T18:20:21.072Z,1531506021.072 [SBIT](IMPORTANT): Kernel Release: 2.6.27.8
2018-07-13T18:20:21.073Z,1531506021.073 [SBIT](INFO): Kernel Reporting Different Version From Configuration.
Kernel Expected: #639 PREEMPT Wed Mar 12 12:53:33 PDT 2014
Kernel Reported: #2 PREEMPT Thu Jan 11 20:13:48 PST 2018
2018-07-13T18:20:21.075Z,1531506021.075 [SBIT](INFO): Beginning SBIT in 23.000000 seconds.
2018-07-13T18:20:21.075Z,1531506021.075 [IBIT](INFO): Initialize IBIT Component.
2018-07-13T18:20:21.076Z,1531506021.076 [CBIT](DEBUG): Initialize CBIT Component.
2018-07-13T18:20:21.076Z,1531506021.076 [CBIT](FAULT): LAST RESTART WAS UNINTENTIONAL.
2018-07-13T18:20:21.077Z,1531506021.077 [CBIT](CRITICAL): LAST REBOOT DUE TO WATCHDOG TIMER RESET.
2018-07-13T18:20:21.077Z,1531506021.077 [logger ThreadHandler](INFO): Handler Thread ID is 890
2018-07-13T18:20:21.097Z,1531506021.097 [Radio_Surface ThreadHandler](INFO): Handler Thread ID is 891
2018-07-13T18:20:21.103Z,1531506021.103 [Radio_Surface](INFO): Powering up
2018-07-13T18:20:21.109Z,1531506021.109 [Rowe_600LCM ThreadHandler](INFO): Handler Thread ID is 892
2018-07-13T18:20:21.110Z,1531506021.110 [Rowe_600LCM](INFO): Initializing
2018-07-13T18:20:21.110Z,1531506021.110 [Rowe_600LCM](INFO): Checking LCM
2018-07-13T18:20:21.189Z,1531506021.189 [VerticalControl](DEBUG): Initialize VerticalControlComponent.
2018-07-13T18:20:21.191Z,1531506021.191 [HorizontalControl](DEBUG): Initialize HorizontalControlComponent.
2018-07-13T18:20:21.192Z,1531506021.192 [SpeedControl](DEBUG): Initialize SpeedControlComponent.
2018-07-13T18:20:21.192Z,1531506021.192 [LoopControl](DEBUG): Initialize LoopControlComponent.
2018-07-13T18:20:21.193Z,1531506021.193 [DeadReckonUsingSpeedCalculator](DEBUG): Initializing DeadReckonUsingSpeedCalculator component.
2018-07-13T18:20:21.194Z,1531506021.194 [DeadReckonUsingSpeedCalculator](INFO): Will consider orientation measurement stale after 120s.
2018-07-13T18:20:21.194Z,1531506021.194 [DeadReckonUsingSpeedCalculator](INFO): Will consider velocity measurement stale after 20s.
2018-07-13T18:20:21.194Z,1531506021.194 [NavChart](DEBUG): Initialize NavChart Navigation.
2018-07-13T18:20:21.195Z,1531506021.195 [UniversalFixResidualReporter](DEBUG): Initializing UniversalFixResidualReporter component.
2018-07-13T18:20:21.196Z,1531506021.196 [MissionManager](INFO): Loading Mission: Missions/Startup.xml
2018-07-13T18:20:21.258Z,1531506021.258 [CTD_NeilBrown ThreadHandler](INFO): Handler Thread ID is 893
2018-07-13T18:20:21.259Z,1531506021.259 [CTD_NeilBrown](INFO): Powering down
2018-07-13T18:20:21.279Z,1531506021.279 [CTD_Seabird ThreadHandler](INFO): Handler Thread ID is 894
2018-07-13T18:20:21.280Z,1531506021.280 [CTD_Seabird](INFO): Initializing
2018-07-13T18:20:21.280Z,1531506021.280 [CTD_Seabird](INFO): Checking LCM
2018-07-13T18:20:21.387Z,1531506021.387 [WetLabsBB2FL ThreadHandler](INFO): Handler Thread ID is 895
2018-07-13T18:20:21.388Z,1531506021.388 [WetLabsBB2FL](INFO): Powering down
2018-07-13T18:20:21.390Z,1531506021.390 [NavChartDb ThreadHandler](INFO): Handler Thread ID is 896
2018-07-13T18:20:21.400Z,1531506021.400 [NavChartDb](INFO): Looking for Electronic Nav Chart file at: Resources/ElectronicNavigationCharts/US1WC07M.000
2018-07-13T18:20:21.400Z,1531506021.400 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US1WC07M.000
2018-07-13T18:20:21.400Z,1531506021.400 [NavChartDb](INFO): Looking for Electronic Nav Chart file at: Resources/ElectronicNavigationCharts/US2WC11M.000
2018-07-13T18:20:21.401Z,1531506021.401 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US2WC11M.000
2018-07-13T18:20:21.401Z,1531506021.401 [NavChartDb](INFO): Looking for Electronic Nav Chart file at: Resources/ElectronicNavigationCharts/US3CA52M.000
2018-07-13T18:20:21.401Z,1531506021.401 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US3CA52M.000
2018-07-13T18:20:21.401Z,1531506021.401 [NavChartDb](INFO): Looking for Electronic Nav Chart file at: Resources/ElectronicNavigationCharts/US4CA60M.000
2018-07-13T18:20:21.402Z,1531506021.402 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US4CA60M.000
2018-07-13T18:20:21.402Z,1531506021.402 [NavChartDb](INFO): Looking for Electronic Nav Chart file at: Resources/ElectronicNavigationCharts/US5CA50M.000
2018-07-13T18:20:21.402Z,1531506021.402 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA50M.000
2018-07-13T18:20:21.402Z,1531506021.402 [NavChartDb](INFO): Looking for Electronic Nav Chart file at: Resources/ElectronicNavigationCharts/US5CA61M.000
2018-07-13T18:20:21.402Z,1531506021.402 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA61M.000
2018-07-13T18:20:21.403Z,1531506021.403 [NavChartDb](INFO): Looking for Electronic Nav Chart file at: Resources/ElectronicNavigationCharts/US5CA62M.000
2018-07-13T18:20:21.403Z,1531506021.403 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA62M.000
2018-07-13T18:20:21.403Z,1531506021.403 [NavChartDb](INFO): Looking for Electronic Nav Chart file at: Resources/ElectronicNavigationCharts/US5CA83M.000
2018-07-13T18:20:21.403Z,1531506021.403 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA83M.000
2018-07-13T18:20:21.501Z,1531506021.501 [Startup:A.GoToSurface](DEBUG): Construct GoToSurface.
2018-07-13T18:20:21.520Z,1531506021.520 [MissionManager](DEBUG): 
<?xml version="1.0" encoding="UTF-8"?>
<Mission xmlns="Tethys"
       xmlns:Control="Tethys/Control"
       xmlns:Guidance="Tethys/Guidance" 
       xmlns:Units="Tethys/Units"
       xmlns:Universal="Tethys/Universal"
       xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
       xsi:schemaLocation="Tethys http://okeanids.mbari.org/tethys/Xml/Tethys.xsd
                           Tethys/Control http://okeanids.mbari.org/tethys/Xml/Control.xsd
                           Tethys/Guidance http://okeanids.mbari.org/tethys/Xml/Guidance.xsd
                           Tethys/Units http://okeanids.mbari.org/tethys/Xml/Units.xsd
                           Tethys/Universal http://okeanids.mbari.org/tethys/Xml/Universal.xsd"
       Id="Startup">

    <Guidance:GoToSurface>
        <Progression/>
    </Guidance:GoToSurface>

    <Aggregate Id="StartupSatComms">

        <Sequence/>

        <ReadDatum>
            <Timeout Duration="P1M" />
            <Universal:latitude_fix/>
        </ReadDatum>

        <ReadDatum>
            <Timeout Duration="P1M" />
            <Universal:platform_communications/>
        </ReadDatum>

    </Aggregate>

</Mission>


2018-07-13T18:20:21.570Z,1531506021.570 [MissionManager](INFO): Loading Mission: Missions/Default.xml
2018-07-13T18:20:21.632Z,1531506021.632 [CTD_Seabird](INFO): LCM OK
2018-07-13T18:20:21.632Z,1531506021.632 [CTD_Seabird](INFO): Powering up
2018-07-13T18:20:21.632Z,1531506021.632 [Rowe_600LCM](INFO): LCM OK
2018-07-13T18:20:21.645Z,1531506021.645 [Rowe_600LCM](INFO): Powering up
2018-07-13T18:20:21.692Z,1531506021.692 [MissionManager](INFO): DefineArg Default.ElapsedSinceDefaultStarted = 0.000000 min
2018-07-13T18:20:21.721Z,1531506021.721 [Default:A.Wait](DEBUG): Construct Wait.
2018-07-13T18:20:21.723Z,1531506021.723 [Default:B.GoToSurface](DEBUG): Construct GoToSurface.
2018-07-13T18:20:21.786Z,1531506021.786 [Default:CheckIn:Read_Iridium:A_Timeout:A.Execute](DEBUG): Construct Execute.
2018-07-13T18:20:21.789Z,1531506021.789 [Default:CheckIn:C.Wait](DEBUG): Construct Wait.
2018-07-13T18:20:21.810Z,1531506021.810 [Default:E.Execute](DEBUG): Construct Execute.
2018-07-13T18:20:21.834Z,1531506021.834 [MissionManager](DEBUG): 
<?xml version="1.0" encoding="UTF-8"?>
<Mission xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
         xmlns="Tethys"
         xmlns:Units="Tethys/Units"
         xmlns:Guidance="Tethys/Guidance"
         xmlns:Universal="Tethys/Universal"
         xsi:schemaLocation="Tethys http://okeanids.mbari.org/tethys/Xml/Tethys.xsd
                             Tethys/Units http://okeanids.mbari.org/tethys/Xml/Units.xsd
                             Tethys/Guidance http://okeanids.mbari.org/tethys/Xml/Guidance.xsd
                             Tethys/Universal http://okeanids.mbari.org/tethys/Xml/Universal.xsd"
         Id="Default">

    <DefineArg Name="ElapsedSinceDefaultStarted"><Units:minute/><Value>0</Value></DefineArg>

    <Guidance:Wait>
        <Description>
            Wait a moment to see if the scheduler starts a new mission before
            starting to actually run Default.
        </Description>
        <Sequence/>
        <Setting><Guidance:Wait.duration/><Units:second/><Value>13</Value></Setting>
    </Guidance:Wait>

    <Guidance:GoToSurface>
        <Progression/>
    </Guidance:GoToSurface>

    <Aggregate Id="CheckIn">

        <Sequence Repeat="288"/>

        <ReadDatum Id="Read_GPS">
            <Timeout Duration="P5M"/>
            <Universal:time_fix/>
        </ReadDatum>

        <ReadDatum Id="Read_Iridium">
            <Timeout Duration="P2H">
                <Guidance:Execute>
                    <Sequence/>
                    <Setting><Guidance:Execute.command/><String>Burn 300</String></Setting>
                </Guidance:Execute>
                <Syslog Severity="Critical">Dropped weight due to communications timeout.</Syslog>
            </Timeout>
            <Universal:platform_communications/>
        </ReadDatum>

        <Guidance:Wait>
            <Sequence/>
            <Setting><Guidance:Wait.duration/><Units:minute/><Value>5</Value></Setting>
        </Guidance:Wait>

        <Assign><Sequence/><Arg Name="ElapsedSinceDefaultStarted"/><Elapsed><Universal:mission_started/></Elapsed></Assign>

        <Syslog Severity="Important">Default mission has been running for <Arg Name="ElapsedSinceDefaultStarted"/><Units:minute/></Syslog>

    </Aggregate>

    <Syslog Severity="Important">Restarting logs and Default mission.</Syslog>

    <Guidance:Execute>
        <Sequence/>
        <Setting><Guidance:Execute.command/><String>restart logs</String></Setting>
    </Guidance:Execute>

</Mission>


2018-07-13T18:20:21.839Z,1531506021.839 [controlThread](DEBUG): Component order: CycleStarter,DataOverHttps,Depth_Keller,DropWeight,NAL9602,Onboard,PNI_TCM,BPC1,Aanderaa_O2,PAR_Licor,Depth_Keller,PAR_Licor,DepthRateCalculator,PitchRateCalculator,SpeedCalculator,TempGradientCalculator,VerticalTemperatureHomogeneityIndexCalculator,YawRateCalculator,ElevatorOffsetCalculator,StratificationFrontDetector,DeadReckonUsingSpeedCalculator,NavChart,UniversalFixResidualReporter,MissionManager,VerticalControl,HorizontalControl,SpeedControl,LoopControl,BuoyancyServo,ElevatorServo,MassServo,RudderServo,ThrusterServo,SBIT,IBIT,CBIT,Reporter,LogSplitter,
2018-07-13T18:20:21.864Z,1531506021.864 [DataOverHttps](DEBUG): dashIP=134.89.2.23 starts with a digit so assuming it is a numeric IP
2018-07-13T18:20:21.888Z,1531506021.888 [Depth_Keller](ERROR): Pressure reading out of range: 1831.023193 decibar
2018-07-13T18:20:22.277Z,1531506022.277 [DepthRateCalculator](ERROR): Depth measurement is not active
2018-07-13T18:20:22.385Z,1531506022.385 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2018-07-13T18:20:22.585Z,1531506022.585 [BuoyancyServo](DEBUG): Initializing EZServoServo.
2018-07-13T18:20:22.593Z,1531506022.593 [BuoyancyServo](DEBUG): Initializing BuoyancyServo.
2018-07-13T18:20:22.608Z,1531506022.608 [ElevatorServo](DEBUG): Initializing EZServoServo.
2018-07-13T18:20:22.613Z,1531506022.613 [ElevatorServo](DEBUG): Initializing ElevatorServo.
2018-07-13T18:20:22.627Z,1531506022.627 [MassServo](DEBUG): Initializing EZServoServo.
2018-07-13T18:20:22.633Z,1531506022.633 [MassServo](DEBUG): Initializing MassServo.
2018-07-13T18:20:22.655Z,1531506022.655 [RudderServo](DEBUG): Initializing EZServoServo.
2018-07-13T18:20:22.661Z,1531506022.661 [RudderServo](DEBUG): Initializing RudderServo.
2018-07-13T18:20:22.673Z,1531506022.673 [ThrusterServo](DEBUG): Initializing EZServoServo.
2018-07-13T18:20:22.681Z,1531506022.681 [ThrusterServo](DEBUG): Initializing ThrusterServo.
2018-07-13T18:20:22.719Z,1531506022.719 [CommandLine](FAULT): Scheduling is paused
2018-07-13T18:20:22.719Z,1531506022.719 [CBIT](INFO): Critical error at 20180713T182021
2018-07-13T18:20:22.720Z,1531506022.720 [Supervisor](INFO): Stop Mission called by CBIT::checkCriticals
2018-07-13T18:20:22.975Z,1531506022.975 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2018-07-13T18:20:23.230Z,1531506023.230 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2018-07-13T18:20:23.569Z,1531506023.569 [BuoyancyServo](ERROR): Buoyancy initialization uart error serial timeout
2018-07-13T18:20:23.569Z,1531506023.569 [BuoyancyServo](FAULT): Buoyancy failed to initialize
2018-07-13T18:20:23.569Z,1531506023.569 [BuoyancyServo] Communications Fault, FailCount= 1
2018-07-13T18:20:23.569Z,1531506023.569 [BuoyancyServo](ERROR): Communications Fault
2018-07-13T18:20:23.773Z,1531506023.773 [CBIT](ERROR): Communications Fault in component: BuoyancyServo
2018-07-13T18:20:23.839Z,1531506023.839 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2018-07-13T18:20:23.861Z,1531506023.861 [BuoyancyServo](DEBUG): Uninitialize Buoyancy Servo.
2018-07-13T18:20:23.862Z,1531506023.862 [BuoyancyServo](INFO): Powering down
2018-07-13T18:20:24.238Z,1531506024.238 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2018-07-13T18:20:24.637Z,1531506024.637 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2018-07-13T18:20:25.040Z,1531506025.040 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2018-07-13T18:20:25.428Z,1531506025.428 [Aanderaa_O2](INFO): Powering down
2018-07-13T18:20:25.556Z,1531506025.556 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2018-07-13T18:20:25.701Z,1531506025.701 [Rowe_600LCM](INFO): Stopping potential previous instance(s) of Rowe LCM interface
2018-07-13T18:20:25.843Z,1531506025.843 [Rowe_600LCM](INFO): Started Rowe LCM interface with command:nohup ./lrauv-framework/onboard/bin/roweadcp -ldir /mnt/mmc/LRAUV/Logs/latest/ -dev /dev/ttyB4 -b 9600 >& /dev/null &
2018-07-13T18:20:25.979Z,1531506025.979 [CBIT](INFO): Clearing failed state for component BuoyancyServo
2018-07-13T18:20:25.979Z,1531506025.979 [BuoyancyServo] No Fault, FailCount= 1
2018-07-13T18:20:26.002Z,1531506026.002 [Rowe_600LCM](INFO): LCM subscribed to channel:Rowe_600LCM.adcp_dvl.bottom_track
2018-07-13T18:20:26.003Z,1531506026.003 [Rowe_600LCM](INFO): LCM subscribed to channel:Rowe_600LCM.adcp_dvl.vehicle_water_velocity
2018-07-13T18:20:26.004Z,1531506026.004 [Rowe_600LCM](INFO): LCM subscribed to channel:rowe_dvl.rowe
2018-07-13T18:20:26.303Z,1531506026.303 [BuoyancyServo](DEBUG): Initializing EZServoServo.
2018-07-13T18:20:26.303Z,1531506026.303 [BuoyancyServo](DEBUG): Initializing BuoyancyServo.
2018-07-13T18:20:26.982Z,1531506026.982 [CTD_Seabird](INFO): Stopping potential previous instance(s) of CTD_Seabird LCM interface
2018-07-13T18:20:27.191Z,1531506027.191 [CTD_Seabird](INFO): Started Seabird LCM interface with command:nohup ./lrauv-framework/onboard/bin/gpctd -ldir /mnt/mmc/LRAUV/Logs/latest/ -dev /dev/ttyC6 -b 9600 >& /dev/null &
2018-07-13T18:20:27.194Z,1531506027.194 [CTD_Seabird](INFO): LCM subscribed to channel:ctd_t.seabird-gpctd
2018-07-13T18:20:28.012Z,1531506028.012 [CTD_Seabird](INFO): Stopping potential previous instance(s) of CTD_Seabird LCM interface
2018-07-13T18:20:28.013Z,1531506028.013 [CTD_Seabird](INFO): Powering down
2018-07-13T18:20:44.648Z,1531506044.648 [SBIT](IMPORTANT): Beginning Startup BIT
2018-07-13T18:20:44.660Z,1531506044.660 [CBIT](IMPORTANT): Beginning ground fault scan
2018-07-13T18:20:47.519Z,1531506047.519 [NAL9602](INFO): Powering up NAL9602
2018-07-13T18:20:55.604Z,1531506055.604 [CBIT](IMPORTANT): No ground fault detected
mA:
CHAN A0 (Batt): -0.003497
CHAN A1 (24V): -0.007647
CHAN A2 (12V): -0.002386
CHAN A3 (5V): -0.001492
CHAN B0 (3.3V): -0.000006
CHAN B1 (3.15aV): -0.000532
CHAN B2 (3.15bV): -0.000178
CHAN B3 (GND): -0.000236
OPEN: -0.000565
Full Scale Calc: 4.765 mA, -1.589 mA
2018-07-13T18:20:58.319Z,1531506058.319 [NAL9602](INFO): NAL9602 initialized
2018-07-13T18:21:09.846Z,1531506069.846 [Rowe_600LCM](DEBUG): LCB error: Software Overcurrent.
2018-07-13T18:21:10.642Z,1531506070.642 [Rowe_600LCM](DEBUG): LCB error: Software Overcurrent.
2018-07-13T18:21:23.820Z,1531506083.820 [Rowe_600LCM](DEBUG): LCB error: Software Overcurrent.
2018-07-13T18:21:24.613Z,1531506084.613 [Rowe_600LCM](DEBUG): LCB error: Software Overcurrent.
2018-07-13T18:21:38.464Z,1531506098.464 [SBIT](IMPORTANT): SBIT PASSED
2018-07-13T18:21:38.543Z,1531506098.543 [CommandLine](IMPORTANT): got command configSet list
2018-07-13T18:21:38.543Z,1531506098.543 [CommandLine](IMPORTANT): Listing configuration overrides from Data/persisted.cfg
2018-07-13T18:21:38.549Z,1531506098.549 [CommandLine](IMPORTANT): DAT.loadAtStartup=0 bool;

2018-07-13T18:21:38.549Z,1531506098.549 [CommandLine](IMPORTANT): ESPComponent.loadAtStartup=0 bool;

2018-07-13T18:21:38.549Z,1531506098.549 [CommandLine](IMPORTANT): ESPComponent.sampleTimeout=5 minute;

2018-07-13T18:21:38.550Z,1531506098.550 [CommandLine](IMPORTANT): ESPComponent.simulateHardware=0 bool;

2018-07-13T18:21:38.550Z,1531506098.550 [CommandLine](IMPORTANT): Express none Rowe_600LCM.height_above_sea_floor;

2018-07-13T18:21:38.550Z,1531506098.550 [CommandLine](IMPORTANT): IBIT.batteryMissingStickThreshold=5 count;

2018-07-13T18:21:38.550Z,1531506098.550 [CommandLine](IMPORTANT): Rowe_600LCM.loadAtStartup=1 bool;

2018-07-13T18:21:38.550Z,1531506098.550 [CommandLine](IMPORTANT): VerticalControl.buoyancyNeutral=132 cubic_centimeter;

2018-07-13T18:21:38.550Z,1531506098.550 [CommandLine](IMPORTANT): VerticalControl.massDefault=5.3 millimeter;

2018-07-13T18:21:38.865Z,1531506098.865 [MissionManager](IMPORTANT): Started mission Startup
2018-07-13T18:21:38.866Z,1531506098.866 [Startup] Running Loop=1
2018-07-13T18:21:38.866Z,1531506098.866 [Startup](DEBUG): Aggregate::initialize Startup
2018-07-13T18:21:38.866Z,1531506098.866 [Startup:A.GoToSurface] Running Loop=1
2018-07-13T18:21:38.866Z,1531506098.866 [Startup:A.GoToSurface](DEBUG): Initialize GoToSurfaceComponent.
2018-07-13T18:21:38.867Z,1531506098.867 [Startup:A.GoToSurface](DEBUG): No depth rate setting specified. Using default value of nan m/s.
2018-07-13T18:21:38.867Z,1531506098.867 [Startup:A.GoToSurface](DEBUG): No pitch setting specified. Using default value of nan degrees.
2018-07-13T18:21:38.867Z,1531506098.867 [Startup:A.GoToSurface](DEBUG): No speed setting specified. Using default value of 1.000000 m/s.
2018-07-13T18:21:38.868Z,1531506098.868 [Startup:A.GoToSurface](DEBUG): No surface timeout specified. Using default value of 1000.000000 seconds.
2018-07-13T18:21:38.868Z,1531506098.868 [Startup:A.GoToSurface](INFO): Received pitch timeout configuration 60.000000 seconds.
2018-07-13T18:21:38.875Z,1531506098.875 [Startup:StartupSatComms] Running Loop=1
2018-07-13T18:21:38.875Z,1531506098.875 [Startup:StartupSatComms](DEBUG): Aggregate::initialize Startup:StartupSatComms
2018-07-13T18:21:38.875Z,1531506098.875 [Startup:StartupSatComms:A] Running Loop=1
2018-07-13T18:21:39.239Z,1531506099.239 [Startup:StartupSatComms:A](DEBUG): Initialize ReadDataComponent to sense latitude_fix
2018-07-13T18:22:39.245Z,1531506159.245 [Startup:StartupSatComms:A](INFO): Timed out from 2018-07-13T18:21:38.9Z
2018-07-13T18:22:39.245Z,1531506159.245 [Startup:StartupSatComms:A] Stopped
2018-07-13T18:22:39.246Z,1531506159.246 [Startup:StartupSatComms:B] Running Loop=1
2018-07-13T18:22:39.619Z,1531506159.619 [Startup:StartupSatComms:B](DEBUG): Initialize ReadDataComponent to sense platform_communications
2018-07-13T18:22:51.410Z,1531506171.410 [DataOverHttps](INFO): setting available, lastComms_.elapsed()=0.003704
2018-07-13T18:22:55.838Z,1531506175.838 [DataOverHttps](INFO): Sending 18 bytes from file Logs/20180713T153946/Courier0057.lzma
2018-07-13T18:22:56.636Z,1531506176.636 [DataOverHttps](INFO): Moved sent file to Logs/20180713T153946/Courier0057.lzma.bak
2018-07-13T18:22:56.636Z,1531506176.636 [DataOverHttps](INFO): SBD MOMSN=8368250
2018-07-13T18:23:01.802Z,1531506181.802 [Rowe_600LCM](DEBUG): LCB error: Software Overcurrent.
2018-07-13T18:23:02.598Z,1531506182.598 [Rowe_600LCM](DEBUG): LCB error: Software Overcurrent.
2018-07-13T18:23:06.115Z,1531506186.115 [DataOverHttps](INFO): Sending 99 bytes from file Logs/20180713T182009/Courier0000.lzma
2018-07-13T18:23:06.907Z,1531506186.907 [DataOverHttps](INFO): Moved sent file to Logs/20180713T182009/Courier0000.lzma.bak
2018-07-13T18:23:06.908Z,1531506186.908 [DataOverHttps](INFO): SBD MOMSN=8368252
2018-07-13T18:23:16.375Z,1531506196.375 [DataOverHttps](INFO): Sending 18 bytes from file Logs/20180713T153946/Express0058.lzma
2018-07-13T18:23:17.155Z,1531506197.155 [DataOverHttps](INFO): Moved sent file to Logs/20180713T153946/Express0058.lzma.bak
2018-07-13T18:23:17.156Z,1531506197.156 [DataOverHttps](INFO): SBD MOMSN=8368256
2018-07-13T18:23:21.558Z,1531506201.558 [DeadReckonUsingSpeedCalculator](ERROR): Will not write estimated position: latitudeAccuracy_ = nan, longitudeAccuracy_ = nan, depthAccuracy_ = nan
2018-07-13T18:23:21.558Z,1531506201.558 [DeadReckonUsingSpeedCalculator] Software Fault, FailCount= 1
2018-07-13T18:23:21.558Z,1531506201.558 [DeadReckonUsingSpeedCalculator](ERROR): Software Fault
2018-07-13T18:23:21.587Z,1531506201.587 [CBIT](ERROR): Software Fault in component: DeadReckonUsingSpeedCalculator
2018-07-13T18:23:21.709Z,1531506201.709 [CBIT](INFO): Clearing failed state for component DeadReckonUsingSpeedCalculator
2018-07-13T18:23:21.709Z,1531506201.709 [DeadReckonUsingSpeedCalculator] No Fault, FailCount= 1
2018-07-13T18:23:22.076Z,1531506202.076 [DeadReckonUsingSpeedCalculator](DEBUG): Initializing DeadReckonUsingSpeedCalculator component.
2018-07-13T18:23:22.081Z,1531506202.081 [DeadReckonUsingSpeedCalculator](INFO): Will consider orientation measurement stale after 120s.
2018-07-13T18:23:22.081Z,1531506202.081 [DeadReckonUsingSpeedCalculator](INFO): Will consider velocity measurement stale after 20s.
2018-07-13T18:23:26.644Z,1531506206.644 [DataOverHttps](INFO): Sending 874 bytes from file Logs/20180713T182009/Express0001.lzma
2018-07-13T18:23:27.439Z,1531506207.439 [DataOverHttps](INFO): Moved sent file to Logs/20180713T182009/Express0001.lzma.bak
2018-07-13T18:23:27.440Z,1531506207.440 [DataOverHttps](INFO): SBD MOMSN=8368258
2018-07-13T18:23:28.015Z,1531506208.015 [Startup:StartupSatComms:B] Stopped
2018-07-13T18:23:28.015Z,1531506208.015 [Startup:StartupSatComms](INFO): Completed Startup:StartupSatComms
2018-07-13T18:23:28.015Z,1531506208.015 [Startup:StartupSatComms] Stopped
2018-07-13T18:23:28.015Z,1531506208.015 [Startup:StartupSatComms](DEBUG): Aggregate::uninitialize Startup:StartupSatComms
2018-07-13T18:23:28.016Z,1531506208.016 [Startup](INFO): Completed Startup
2018-07-13T18:23:28.016Z,1531506208.016 [MissionManager](INFO): Startup is completed.
2018-07-13T18:23:28.017Z,1531506208.017 [MissionManager](INFO): Uninitializing Mission Startup
2018-07-13T18:23:28.017Z,1531506208.017 [Startup] Stopped
2018-07-13T18:23:28.017Z,1531506208.017 [Startup](DEBUG): Aggregate::uninitialize Startup
2018-07-13T18:23:28.017Z,1531506208.017 [Startup:A.GoToSurface] Stopped
2018-07-13T18:23:28.017Z,1531506208.017 [Startup:A.GoToSurface](DEBUG): Uninitialize GoToSurfaceComponent.
2018-07-13T18:23:28.301Z,1531506208.301 [MissionManager](IMPORTANT): Started mission Default
2018-07-13T18:23:28.301Z,1531506208.301 [Default] Running Loop=1
2018-07-13T18:23:28.302Z,1531506208.302 [Default](DEBUG): Aggregate::initialize Default
2018-07-13T18:23:28.302Z,1531506208.302 [Default:B.GoToSurface] Running Loop=1
2018-07-13T18:23:28.302Z,1531506208.302 [Default:B.GoToSurface](DEBUG): Initialize GoToSurfaceComponent.
2018-07-13T18:23:28.302Z,1531506208.302 [Default:B.GoToSurface](DEBUG): No depth rate setting specified. Using default value of nan m/s.
2018-07-13T18:23:28.302Z,1531506208.302 [Default:B.GoToSurface](DEBUG): No pitch setting specified. Using default value of nan degrees.
2018-07-13T18:23:28.303Z,1531506208.303 [Default:B.GoToSurface](DEBUG): No speed setting specified. Using default value of 1.000000 m/s.
2018-07-13T18:23:28.303Z,1531506208.303 [Default:B.GoToSurface](DEBUG): No surface timeout specified. Using default value of 1000.000000 seconds.
2018-07-13T18:23:28.303Z,1531506208.303 [Default:B.GoToSurface](INFO): Received pitch timeout configuration 60.000000 seconds.
2018-07-13T18:23:28.304Z,1531506208.304 [Default:A.Wait] Running Loop=1
2018-07-13T18:23:28.304Z,1531506208.304 [Default:A.Wait](DEBUG): Initialize Wait Component.
2018-07-13T18:23:41.547Z,1531506221.547 [Default:A.Wait](INFO): Done Waiting.
2018-07-13T18:23:41.547Z,1531506221.547 [Default:A.Wait] Stopped
2018-07-13T18:23:41.547Z,1531506221.547 [Default:A.Wait](DEBUG): Uninitialize Wait Component.
2018-07-13T18:23:41.983Z,1531506221.983 [Default:CheckIn] Running Loop=1
2018-07-13T18:23:41.983Z,1531506221.983 [Default:CheckIn](DEBUG): Aggregate::initialize Default:CheckIn
2018-07-13T18:23:41.984Z,1531506221.984 [Default:CheckIn:Read_GPS] Running Loop=1
2018-07-13T18:23:42.378Z,1531506222.378 [Default:CheckIn:Read_GPS](DEBUG): Initialize ReadDataComponent to sense time_fix
2018-07-13T18:24:20.646Z,1531506260.646 [CommandLine](IMPORTANT): got command quit
2018-07-13T18:24:21.656Z,1531506261.656 [CommandLine ThreadHandler](INFO): Uninitializing protected caller thread.
2018-07-13T18:24:21.656Z,1531506261.656 [CommandLine ThreadHandler](INFO): Thread cancelled.
2018-07-13T18:24:21.789Z,1531506261.789 [Supervisor](DEBUG): Uninitializing supervisor and starting cleanup.  Bye!
2018-07-13T18:24:21.789Z,1531506261.789 [CommandLine ThreadHandler](INFO): Thread cancelled.
2018-07-13T18:24:21.790Z,1531506261.790 [CommandLine](INFO): Join timeout helper Thread ID is 925
2018-07-13T18:24:21.790Z,1531506261.790 [ComponentRegistry](INFO): Shutting down NavChartDb ThreadHandler
2018-07-13T18:24:21.790Z,1531506261.790 [NavChartDb ThreadHandler](INFO): Thread cancelled.
2018-07-13T18:24:21.791Z,1531506261.791 [NavChartDb](INFO): Join timeout helper Thread ID is 926
2018-07-13T18:24:21.833Z,1531506261.833 [NavChartDb ThreadHandler](INFO): Uninitializing protected caller thread.
2018-07-13T18:24:21.833Z,1531506261.833 [NavChartDb ThreadHandler](INFO): Thread cancelled.
2018-07-13T18:24:21.849Z,1531506261.849 [ComponentRegistry](INFO): Shutting down WetLabsBB2FL ThreadHandler
2018-07-13T18:24:21.849Z,1531506261.849 [WetLabsBB2FL ThreadHandler](INFO): Thread cancelled.
2018-07-13T18:24:21.849Z,1531506261.849 [WetLabsBB2FL](INFO): Join timeout helper Thread ID is 927
2018-07-13T18:24:21.861Z,1531506261.861 [WetLabsBB2FL ThreadHandler](INFO): Uninitializing protected caller thread.
2018-07-13T18:24:21.861Z,1531506261.861 [WetLabsBB2FL](INFO): Powering down
2018-07-13T18:24:21.862Z,1531506261.862 [WetLabsBB2FL ThreadHandler](INFO): Thread cancelled.
2018-07-13T18:24:21.869Z,1531506261.869 [ComponentRegistry](INFO): Shutting down CTD_Seabird ThreadHandler
2018-07-13T18:24:21.869Z,1531506261.869 [CTD_Seabird ThreadHandler](INFO): Thread cancelled.
2018-07-13T18:24:21.869Z,1531506261.869 [CTD_Seabird](INFO): Join timeout helper Thread ID is 928
2018-07-13T18:24:22.069Z,1531506262.069 [CTD_Seabird ThreadHandler](INFO): Uninitializing protected caller thread.
2018-07-13T18:24:22.160Z,1531506262.160 [CTD_Seabird](INFO): Stopping potential previous instance(s) of CTD_Seabird LCM interface
2018-07-13T18:24:22.161Z,1531506262.161 [CTD_Seabird](INFO): Powering down
2018-07-13T18:24:22.162Z,1531506262.162 [CTD_Seabird ThreadHandler](INFO): Thread cancelled.
2018-07-13T18:24:22.173Z,1531506262.173 [ComponentRegistry](INFO): Shutting down CTD_NeilBrown ThreadHandler
2018-07-13T18:24:22.173Z,1531506262.173 [CTD_NeilBrown ThreadHandler](INFO): Thread cancelled.
2018-07-13T18:24:22.173Z,1531506262.173 [CTD_NeilBrown](INFO): Join timeout helper Thread ID is 930
2018-07-13T18:24:22.217Z,1531506262.217 [CTD_NeilBrown ThreadHandler](INFO): Uninitializing protected caller thread.
2018-07-13T18:24:22.218Z,1531506262.218 [CTD_NeilBrown](INFO): Powering down
2018-07-13T18:24:22.218Z,1531506262.218 [CTD_NeilBrown ThreadHandler](INFO): Thread cancelled.
2018-07-13T18:24:22.234Z,1531506262.234 [ComponentRegistry](INFO): Shutting down Rowe_600LCM ThreadHandler
2018-07-13T18:24:22.234Z,1531506262.234 [Rowe_600LCM ThreadHandler](INFO): Thread cancelled.
2018-07-13T18:24:22.234Z,1531506262.234 [Rowe_600LCM](INFO): Join timeout helper Thread ID is 931
2018-07-13T18:24:22.381Z,1531506262.381 [Rowe_600LCM ThreadHandler](INFO): Uninitializing protected caller thread.
2018-07-13T18:24:22.382Z,1531506262.382 [Rowe_600LCM](INFO): Stopping potential previous instance(s) of roweadcp LCM interface
2018-07-13T18:24:22.526Z,1531506262.526 [Rowe_600LCM](INFO): Powering down
2018-07-13T18:24:22.528Z,1531506262.528 [Rowe_600LCM ThreadHandler](INFO): Thread cancelled.
2018-07-13T18:24:22.534Z,1531506262.534 [ComponentRegistry](INFO): Shutting down Radio_Surface ThreadHandler
2018-07-13T18:24:22.534Z,1531506262.534 [Radio_Surface ThreadHandler](INFO): Thread cancelled.
2018-07-13T18:24:22.534Z,1531506262.534 [Radio_Surface](INFO): Join timeout helper Thread ID is 933
2018-07-13T18:24:22.845Z,1531506262.845 [Radio_Surface ThreadHandler](INFO): Uninitializing protected caller thread.
2018-07-13T18:24:22.845Z,1531506262.845 [Radio_Surface ThreadHandler](INFO): Thread cancelled.
2018-07-13T18:24:22.858Z,1531506262.858 [ComponentRegistry](INFO): Shutting down logger ThreadHandler
2018-07-13T18:24:22.858Z,1531506262.858 [logger ThreadHandler](INFO): Thread cancelled.
2018-07-13T18:24:22.859Z,1531506262.859 [logger](INFO): Join timeout helper Thread ID is 934
2018-07-13T18:24:22.859Z,1531506262.859 [logger ThreadHandler](INFO): Uninitializing protected caller thread.
2018-07-13T18:24:22.859Z,1531506262.859 [logger ThreadHandler](INFO): Thread cancelled.
2018-07-13T18:24:22.861Z,1531506262.861 [ComponentRegistry](INFO): Shutting down CommandLine ThreadHandler
2018-07-13T18:24:22.861Z,1531506262.861 [CommandLine ThreadHandler](INFO): Thread cancelled.
2018-07-13T18:24:22.861Z,1531506262.861 [ComponentRegistry](INFO): Shutting down controlThread ThreadHandler
2018-07-13T18:24:22.861Z,1531506262.861 [controlThread ThreadHandler](INFO): Thread cancelled.
2018-07-13T18:24:22.861Z,1531506262.861 [controlThread](INFO): Join timeout helper Thread ID is 935
2018-07-13T18:24:23.093Z,1531506263.093 [controlThread ThreadHandler](INFO): Uninitializing protected caller thread.
2018-07-13T18:24:23.093Z,1531506263.093 [controlThread](DEBUG): Uninitializing ControlThread
2018-07-13T18:24:23.094Z,1531506263.094 [NAL9602](INFO): Powering down
2018-07-13T18:24:23.096Z,1531506263.096 [PNI_TCM](INFO): Powering down
2018-07-13T18:24:23.186Z,1531506263.186 [Aanderaa_O2](INFO): Powering down
2018-07-13T18:24:23.187Z,1531506263.187 [DepthRateCalculator](DEBUG): Initializing DepthRateCalculator.
2018-07-13T18:24:23.189Z,1531506263.189 [ElevatorOffsetCalculator](DEBUG): Uninitializing ElevatorOffsetCalculator.
2018-07-13T18:24:23.189Z,1531506263.189 [NavChart](DEBUG): Uninitialize NavChart Navigation.
2018-07-13T18:24:23.190Z,1531506263.190 [MissionManager](INFO): Uninitializing Mission Default
2018-07-13T18:24:23.190Z,1531506263.190 [Default] Stopped
2018-07-13T18:24:23.190Z,1531506263.190 [Default](DEBUG): Aggregate::uninitialize Default
2018-07-13T18:24:23.190Z,1531506263.190 [Default:B.GoToSurface] Stopped
2018-07-13T18:24:23.190Z,1531506263.190 [Default:B.GoToSurface](DEBUG): Uninitialize GoToSurfaceComponent.
2018-07-13T18:24:23.191Z,1531506263.191 [Default:CheckIn] Stopped
2018-07-13T18:24:23.191Z,1531506263.191 [Default:CheckIn](DEBUG): Aggregate::uninitialize Default:CheckIn
2018-07-13T18:24:23.191Z,1531506263.191 [Default:CheckIn:Read_GPS] Stopped
2018-07-13T18:24:23.194Z,1531506263.194 [VerticalControl](DEBUG): Uninitialize VerticalControlComponent.
2018-07-13T18:24:23.195Z,1531506263.195 [HorizontalControl](DEBUG): Uninitialize HorizontalControlComponent.
2018-07-13T18:24:23.195Z,1531506263.195 [SpeedControl](DEBUG): Uninitialize SpeedControlComponent.
2018-07-13T18:24:23.195Z,1531506263.195 [LoopControl](DEBUG): Uninitialize LoopControlComponent.
2018-07-13T18:24:23.196Z,1531506263.196 [BuoyancyServo](DEBUG): Uninitialize Buoyancy Servo.
2018-07-13T18:24:23.196Z,1531506263.196 [BuoyancyServo](INFO): Powering down
2018-07-13T18:24:23.209Z,1531506263.209 [ElevatorServo](DEBUG): Uninitialize Elevator Servo.
2018-07-13T18:24:23.209Z,1531506263.209 [ElevatorServo](INFO): Powering down
2018-07-13T18:24:23.210Z,1531506263.210 [MassServo](DEBUG): Uninitialize Mass Servo.
2018-07-13T18:24:23.210Z,1531506263.210 [MassServo](INFO): Powering down
2018-07-13T18:24:23.211Z,1531506263.211 [RudderServo](DEBUG): Uninitialize Rudder Servo.
2018-07-13T18:24:23.211Z,1531506263.211 [RudderServo](INFO): Powering down
2018-07-13T18:24:23.212Z,1531506263.212 [ThrusterServo](DEBUG): Uninitialize Thruster Servo.
2018-07-13T18:24:23.212Z,1531506263.212 [ThrusterServo](INFO): Powering down
2018-07-13T18:24:23.213Z,1531506263.213 [SBIT](DEBUG): Uninitialize SBIT Component.
2018-07-13T18:24:23.214Z,1531506263.214 [IBIT](DEBUG): Uninitialize IBIT Component.
2018-07-13T18:24:23.214Z,1531506263.214 [CBIT](DEBUG): Uninitialize CBIT Component.
2018-07-13T18:24:23.215Z,1531506263.215 [controlThread ThreadHandler](INFO): Thread cancelled.
2018-07-13T18:24:23.326Z,1531506263.326 [Rowe_600LCM ThreadHandler](INFO): Thread cancelled.
2018-07-13T18:24:23.332Z,1531506263.332 [Radio_Surface ThreadHandler](INFO): Thread cancelled.
2018-07-13T18:24:23.369Z,1531506263.369 [WetLabsBB2FL ThreadHandler](INFO): Thread cancelled.
2018-07-13T18:24:23.373Z,1531506263.373 [CTD_Seabird ThreadHandler](INFO): Thread cancelled.
2018-07-13T18:24:23.375Z,1531506263.375 [CTD_NeilBrown ThreadHandler](INFO): Thread cancelled.
2018-07-13T18:24:23.402Z,1531506263.402 [NavChartDb ThreadHandler](INFO): Thread cancelled.
2018-07-13T18:24:23.459Z,1531506263.459 [logger ThreadHandler](INFO): Thread cancelled.