2018-05-23T23:40:15.249Z,1527118815.249 [Supervisor](DEBUG): Initializing supervisor.
2018-05-23T23:40:15.252Z,1527118815.252 [SyncHandler](DEBUG): Created PCaller Thread at 404514E0
2018-05-23T23:40:15.252Z,1527118815.252 [SyncHandler](INFO): Protected caller Thread ID is 5910
2018-05-23T23:40:15.253Z,1527118815.253 [ComponentRegistry](DEBUG): Component "controlThread" handled in its own thread.
2018-05-23T23:40:15.253Z,1527118815.253 [controlThread ThreadHandler](DEBUG): Created PCaller Thread at 404814E0
2018-05-23T23:40:15.254Z,1527118815.254 [controlThread ThreadHandler](INFO): Protected caller Thread ID is 5911
2018-05-23T23:40:15.256Z,1527118815.256 [ComponentRegistry](DEBUG): SyncComponent "CycleStarter" handled in the control thread.
2018-05-23T23:40:15.267Z,1527118815.267 [ComponentRegistry](DEBUG): Component "CommandLine" handled in its own thread.
2018-05-23T23:40:15.268Z,1527118815.268 [CommandLine ThreadHandler](DEBUG): Created PCaller Thread at 404B14E0
2018-05-23T23:40:15.269Z,1527118815.269 [CommandLine ThreadHandler](INFO): Protected caller Thread ID is 5912
2018-05-23T23:40:15.269Z,1527118815.269 [ComponentRegistry](DEBUG): Component "logger" handled in its own thread.
2018-05-23T23:40:15.270Z,1527118815.270 [logger ThreadHandler](DEBUG): Created PCaller Thread at 404E14E0
2018-05-23T23:40:15.271Z,1527118815.271 [logger ThreadHandler](INFO): Protected caller Thread ID is 5913
2018-05-23T23:40:15.273Z,1527118815.273 [ComponentRegistry](DEBUG): SyncComponent "LogSplitter" handled in the control thread.
2018-05-23T23:40:15.273Z,1527118815.273 [Supervisor](INFO): Looking for Config files in directory: Config/
2018-05-23T23:40:15.276Z,1527118815.276 [Supervisor](INFO): Opening Config file at: Config/Control.cfg
2018-05-23T23:40:15.592Z,1527118815.592 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Control
2018-05-23T23:40:15.593Z,1527118815.593 [Supervisor](INFO): Opening Config file at: Config/logger.cfg
2018-05-23T23:40:15.784Z,1527118815.784 [ComponentRegistry](DEBUG): Loaded Config Component "Config/logger
2018-05-23T23:40:15.784Z,1527118815.784 [Supervisor](INFO): Opening Config file at: Config/Servo.cfg
2018-05-23T23:40:16.057Z,1527118816.057 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Servo
2018-05-23T23:40:16.057Z,1527118816.057 [Supervisor](INFO): Opening Config file at: Config/Derivation.cfg
2018-05-23T23:40:16.198Z,1527118816.198 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Derivation
2018-05-23T23:40:16.199Z,1527118816.199 [Supervisor](INFO): Opening Config file at: Config/Sample.cfg
2018-05-23T23:40:16.434Z,1527118816.434 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Sample
2018-05-23T23:40:16.434Z,1527118816.434 [Supervisor](INFO): Opening Config file at: Config/Simulator.cfg
2018-05-23T23:40:16.965Z,1527118816.965 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Simulator
2018-05-23T23:40:16.965Z,1527118816.965 [Supervisor](INFO): Opening Config file at: Config/Sensor.cfg
2018-05-23T23:40:17.334Z,1527118817.334 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Sensor
2018-05-23T23:40:17.334Z,1527118817.334 [Supervisor](INFO): Opening Config file at: Config/vehicle.cfg
2018-05-23T23:40:17.758Z,1527118817.758 [ComponentRegistry](DEBUG): Loaded Config Component "Config/vehicle
2018-05-23T23:40:17.758Z,1527118817.758 [Supervisor](INFO): Opening Config file at: Config/workSite.cfg
2018-05-23T23:40:17.861Z,1527118817.861 [ComponentRegistry](DEBUG): Loaded Config Component "Config/workSite
2018-05-23T23:40:17.861Z,1527118817.861 [Supervisor](INFO): Opening Config file at: Config/secure.cfg
2018-05-23T23:40:17.958Z,1527118817.958 [ComponentRegistry](DEBUG): Loaded Config Component "Config/secure
2018-05-23T23:40:17.958Z,1527118817.958 [Supervisor](INFO): Opening Config file at: Config/Navigation.cfg
2018-05-23T23:40:18.171Z,1527118818.171 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Navigation
2018-05-23T23:40:18.171Z,1527118818.171 [Supervisor](INFO): Opening Config file at: Config/BIT.cfg
2018-05-23T23:40:18.372Z,1527118818.372 [ComponentRegistry](DEBUG): Loaded Config Component "Config/BIT
2018-05-23T23:40:18.373Z,1527118818.373 [Supervisor](INFO): Opening Config file at: Config/Science.cfg
2018-05-23T23:40:18.706Z,1527118818.706 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Science
2018-05-23T23:40:18.706Z,1527118818.706 [Supervisor](INFO): Opening Config file at: Config/Estimation.cfg
2018-05-23T23:40:18.843Z,1527118818.843 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Estimation
2018-05-23T23:40:18.843Z,1527118818.843 [Supervisor](INFO): Opening Config file at: Config/Guidance.cfg
2018-05-23T23:40:18.926Z,1527118818.926 [Supervisor](INFO): Looking for Config files in directory: Config/lrauv-daphne/
2018-05-23T23:40:18.927Z,1527118818.927 [Supervisor](INFO): Opening Config file at: Config/lrauv-daphne/Control.cfg
2018-05-23T23:40:19.027Z,1527118819.027 [Supervisor](INFO): Opening Config file at: Config/lrauv-daphne/logger.cfg
2018-05-23T23:40:19.117Z,1527118819.117 [Supervisor](INFO): Opening Config file at: Config/lrauv-daphne/Servo.cfg
2018-05-23T23:40:19.210Z,1527118819.210 [Supervisor](INFO): Opening Config file at: Config/lrauv-daphne/Simulator.cfg
2018-05-23T23:40:19.295Z,1527118819.295 [Supervisor](INFO): Opening Config file at: Config/lrauv-daphne/Sensor.cfg
2018-05-23T23:40:19.439Z,1527118819.439 [Supervisor](INFO): Opening Config file at: Config/lrauv-daphne/vehicle.cfg
2018-05-23T23:40:19.606Z,1527118819.606 [Supervisor](INFO): Opening Config file at: Config/lrauv-daphne/workSite.cfg
2018-05-23T23:40:19.682Z,1527118819.682 [Supervisor](INFO): Opening Config file at: Config/lrauv-daphne/Battery.cfg
2018-05-23T23:40:19.905Z,1527118819.905 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Battery
2018-05-23T23:40:19.906Z,1527118819.906 [Supervisor](INFO): Opening Config file at: Config/lrauv-daphne/secure.cfg
2018-05-23T23:40:19.988Z,1527118819.988 [Supervisor](INFO): Opening Config file at: Config/lrauv-daphne/Navigation.cfg
2018-05-23T23:40:20.076Z,1527118820.076 [Supervisor](INFO): Opening Config file at: Config/lrauv-daphne/BIT.cfg
2018-05-23T23:40:20.175Z,1527118820.175 [Supervisor](INFO): Opening Config file at: Config/lrauv-daphne/Science.cfg
2018-05-23T23:40:20.296Z,1527118820.296 [Supervisor](INFO): Looking for Config files in directory: Config/lrauv-daphne/root/
2018-05-23T23:40:20.297Z,1527118820.297 [Supervisor](IMPORTANT): Reading configuration overrides from Data/persisted.cfg
2018-05-23T23:40:20.306Z,1527118820.306 [Module Loader](DEBUG): Loading Module at Modules/Guidance.so
2018-05-23T23:40:20.536Z,1527118820.536 [Module Loader](DEBUG): Loaded Module: Guidance (Contains behaviors and commands)
2018-05-23T23:40:20.537Z,1527118820.537 [Module Loader](DEBUG): Loading Module at Modules/Derivation.so
2018-05-23T23:40:20.577Z,1527118820.577 [DepthRateCalculator] Loaded
2018-05-23T23:40:20.577Z,1527118820.577 [ComponentRegistry](DEBUG): SyncComponent "DepthRateCalculator" handled in the control thread.
2018-05-23T23:40:20.583Z,1527118820.583 [PitchRateCalculator] Loaded
2018-05-23T23:40:20.583Z,1527118820.583 [ComponentRegistry](DEBUG): SyncComponent "PitchRateCalculator" handled in the control thread.
2018-05-23T23:40:20.598Z,1527118820.598 [SpeedCalculator] Loaded
2018-05-23T23:40:20.598Z,1527118820.598 [ComponentRegistry](DEBUG): SyncComponent "SpeedCalculator" handled in the control thread.
2018-05-23T23:40:20.619Z,1527118820.619 [TempGradientCalculator] Loaded
2018-05-23T23:40:20.619Z,1527118820.619 [ComponentRegistry](DEBUG): SyncComponent "TempGradientCalculator" handled in the control thread.
2018-05-23T23:40:20.634Z,1527118820.634 [VerticalTemperatureHomogeneityIndexCalculator] Loaded
2018-05-23T23:40:20.634Z,1527118820.634 [ComponentRegistry](DEBUG): SyncComponent "VerticalTemperatureHomogeneityIndexCalculator" handled in the control thread.
2018-05-23T23:40:20.640Z,1527118820.640 [YawRateCalculator] Loaded
2018-05-23T23:40:20.640Z,1527118820.640 [ComponentRegistry](DEBUG): SyncComponent "YawRateCalculator" handled in the control thread.
2018-05-23T23:40:20.678Z,1527118820.678 [ElevatorOffsetCalculator] Loaded
2018-05-23T23:40:20.678Z,1527118820.678 [ComponentRegistry](DEBUG): SyncComponent "ElevatorOffsetCalculator" handled in the control thread.
2018-05-23T23:40:20.678Z,1527118820.678 [Module Loader](DEBUG): Loaded Module: Derivation (Contains the base derivation components)
2018-05-23T23:40:20.679Z,1527118820.679 [Module Loader](DEBUG): Loading Module at Modules/Estimation.so
2018-05-23T23:40:20.758Z,1527118820.758 [StratificationFrontDetector](INFO): threshold set to: 0.399988 degC
2018-05-23T23:40:20.758Z,1527118820.758 [StratificationFrontDetector](DEBUG): (re)initializing
2018-05-23T23:40:20.759Z,1527118820.759 [StratificationFrontDetector] Loaded
2018-05-23T23:40:20.759Z,1527118820.759 [ComponentRegistry](DEBUG): SyncComponent "StratificationFrontDetector" handled in the control thread.
2018-05-23T23:40:20.759Z,1527118820.759 [Module Loader](DEBUG): Loaded Module: Estimation (Contains the base estimation components)
2018-05-23T23:40:20.760Z,1527118820.760 [Module Loader](DEBUG): Loading Module at Modules/Servo.so
2018-05-23T23:40:20.867Z,1527118820.867 [BuoyancyServo] Loaded
2018-05-23T23:40:20.867Z,1527118820.867 [ComponentRegistry](DEBUG): SyncComponent "BuoyancyServo" handled in the control thread.
2018-05-23T23:40:20.881Z,1527118820.881 [ElevatorServo] Loaded
2018-05-23T23:40:20.882Z,1527118820.882 [ComponentRegistry](DEBUG): SyncComponent "ElevatorServo" handled in the control thread.
2018-05-23T23:40:20.896Z,1527118820.896 [MassServo] Loaded
2018-05-23T23:40:20.896Z,1527118820.896 [ComponentRegistry](DEBUG): SyncComponent "MassServo" handled in the control thread.
2018-05-23T23:40:20.911Z,1527118820.911 [RudderServo] Loaded
2018-05-23T23:40:20.911Z,1527118820.911 [ComponentRegistry](DEBUG): SyncComponent "RudderServo" handled in the control thread.
2018-05-23T23:40:20.925Z,1527118820.925 [ThrusterServo] Loaded
2018-05-23T23:40:20.925Z,1527118820.925 [ComponentRegistry](DEBUG): SyncComponent "ThrusterServo" handled in the control thread.
2018-05-23T23:40:20.925Z,1527118820.925 [Module Loader](DEBUG): Loaded Module: Servo (This is the module containing motor controllers)
2018-05-23T23:40:20.926Z,1527118820.926 [Module Loader](DEBUG): Loading Module at Modules/Sample.so
2018-05-23T23:40:20.939Z,1527118820.939 [Module Loader](DEBUG): Loaded Module: Sample (This is a Sample Module of Sample Components)
2018-05-23T23:40:20.939Z,1527118820.939 [Module Loader](DEBUG): Loading Module at Modules/Simulator.so
2018-05-23T23:40:21.034Z,1527118821.034 [Module Loader](DEBUG): Loaded Module: Simulator (This is the module containing the Simulator)
2018-05-23T23:40:21.035Z,1527118821.035 [Module Loader](DEBUG): Loading Module at Modules/Sensor.so
2018-05-23T23:40:21.307Z,1527118821.307 [DataOverHttps] Loaded
2018-05-23T23:40:21.307Z,1527118821.307 [ComponentRegistry](DEBUG): SyncComponent "DataOverHttps" handled in the control thread.
2018-05-23T23:40:21.320Z,1527118821.320 [Depth_Keller] Loaded
2018-05-23T23:40:21.321Z,1527118821.321 [ComponentRegistry](DEBUG): SyncComponent "Depth_Keller" handled in the control thread.
2018-05-23T23:40:21.325Z,1527118821.325 [DropWeight] Loaded
2018-05-23T23:40:21.325Z,1527118821.325 [ComponentRegistry](DEBUG): SyncComponent "DropWeight" handled in the control thread.
2018-05-23T23:40:21.341Z,1527118821.341 [Onboard] Loaded
2018-05-23T23:40:21.342Z,1527118821.342 [ComponentRegistry](DEBUG): SyncComponent "Onboard" handled in the control thread.
2018-05-23T23:40:21.352Z,1527118821.352 [Radio_Surface] Loaded
2018-05-23T23:40:21.353Z,1527118821.353 [ComponentRegistry](DEBUG): Component "Radio_Surface" handled in its own thread.
2018-05-23T23:40:21.354Z,1527118821.354 [Radio_Surface ThreadHandler](DEBUG): Created PCaller Thread at 408844E0
2018-05-23T23:40:21.354Z,1527118821.354 [Radio_Surface ThreadHandler](INFO): Protected caller Thread ID is 5995
2018-05-23T23:40:21.400Z,1527118821.400 [PNI_TCM] Loaded
2018-05-23T23:40:21.400Z,1527118821.400 [ComponentRegistry](DEBUG): SyncComponent "PNI_TCM" handled in the control thread.
2018-05-23T23:40:23.091Z,1527118823.091 [BPC1] Loaded
2018-05-23T23:40:23.091Z,1527118823.091 [ComponentRegistry](DEBUG): SyncComponent "BPC1" handled in the control thread.
2018-05-23T23:40:23.092Z,1527118823.092 [Module Loader](DEBUG): Loaded Module: Sensor (Contains the sensor components)
2018-05-23T23:40:23.092Z,1527118823.092 [Module Loader](DEBUG): Loading Module at Modules/BIT.so
2018-05-23T23:40:23.353Z,1527118823.353 [SBIT](DEBUG): Construct Startup Built In Test.
2018-05-23T23:40:23.422Z,1527118823.422 [SBIT] Loaded
2018-05-23T23:40:23.422Z,1527118823.422 [ComponentRegistry](DEBUG): SyncComponent "SBIT" handled in the control thread.
2018-05-23T23:40:23.423Z,1527118823.423 [IBIT](DEBUG): Construct Initiated Built In Test.
2018-05-23T23:40:23.442Z,1527118823.442 [IBIT] Loaded
2018-05-23T23:40:23.443Z,1527118823.443 [ComponentRegistry](DEBUG): SyncComponent "IBIT" handled in the control thread.
2018-05-23T23:40:23.446Z,1527118823.446 [CBIT](DEBUG): Construct Continuous Built In Test.
2018-05-23T23:40:23.708Z,1527118823.708 [CBIT] Loaded
2018-05-23T23:40:23.708Z,1527118823.708 [ComponentRegistry](DEBUG): SyncComponent "CBIT" handled in the control thread.
2018-05-23T23:40:23.709Z,1527118823.709 [Module Loader](DEBUG): Loaded Module: BIT (Contains the BuiltInTest components, such as C Built In Test)
2018-05-23T23:40:23.709Z,1527118823.709 [Module Loader](DEBUG): Loading Module at Modules/Science.so
2018-05-23T23:40:24.080Z,1527118824.080 [Aanderaa_O2] Loaded
2018-05-23T23:40:24.081Z,1527118824.081 [ComponentRegistry](DEBUG): SyncComponent "Aanderaa_O2" handled in the control thread.
2018-05-23T23:40:24.093Z,1527118824.093 [CANONSampler] Loaded
2018-05-23T23:40:24.093Z,1527118824.093 [ComponentRegistry](DEBUG): SyncComponent "CANONSampler" handled in the control thread.
2018-05-23T23:40:24.167Z,1527118824.167 [CTD_NeilBrown] Loaded
2018-05-23T23:40:24.167Z,1527118824.167 [ComponentRegistry](DEBUG): Component "CTD_NeilBrown" handled in its own thread.
2018-05-23T23:40:24.168Z,1527118824.168 [CTD_NeilBrown ThreadHandler](DEBUG): Created PCaller Thread at 409444E0
2018-05-23T23:40:24.169Z,1527118824.169 [CTD_NeilBrown ThreadHandler](INFO): Protected caller Thread ID is 5996
2018-05-23T23:40:24.214Z,1527118824.214 [CTD_Seabird] Loaded
2018-05-23T23:40:24.214Z,1527118824.214 [ComponentRegistry](DEBUG): Component "CTD_Seabird" handled in its own thread.
2018-05-23T23:40:24.215Z,1527118824.215 [CTD_Seabird ThreadHandler](DEBUG): Created PCaller Thread at 409744E0
2018-05-23T23:40:24.215Z,1527118824.215 [CTD_Seabird ThreadHandler](INFO): Protected caller Thread ID is 5997
2018-05-23T23:40:24.231Z,1527118824.231 [ESPComponent] Loaded
2018-05-23T23:40:24.231Z,1527118824.231 [ComponentRegistry](DEBUG): SyncComponent "ESPComponent" handled in the control thread.
2018-05-23T23:40:24.245Z,1527118824.245 [PAR_Licor] Loaded
2018-05-23T23:40:24.245Z,1527118824.245 [ComponentRegistry](DEBUG): SyncComponent "PAR_Licor" handled in the control thread.
2018-05-23T23:40:24.293Z,1527118824.293 [WetLabsBB2FL] Loaded
2018-05-23T23:40:24.293Z,1527118824.293 [ComponentRegistry](DEBUG): Component "WetLabsBB2FL" handled in its own thread.
2018-05-23T23:40:24.294Z,1527118824.294 [WetLabsBB2FL ThreadHandler](DEBUG): Created PCaller Thread at 409A44E0
2018-05-23T23:40:24.294Z,1527118824.294 [WetLabsBB2FL ThreadHandler](INFO): Protected caller Thread ID is 5998
2018-05-23T23:40:24.295Z,1527118824.295 [Module Loader](DEBUG): Loaded Module: Science (Contains the science components)
2018-05-23T23:40:24.296Z,1527118824.296 [Module Loader](DEBUG): Loading Module at Modules/Control.so
2018-05-23T23:40:24.359Z,1527118824.359 [VerticalControl](DEBUG): Construct VerticalControl.
2018-05-23T23:40:24.440Z,1527118824.440 [VerticalControl] Loaded
2018-05-23T23:40:24.440Z,1527118824.440 [ComponentRegistry](DEBUG): SyncComponent "VerticalControl" handled in the control thread.
2018-05-23T23:40:24.441Z,1527118824.441 [HorizontalControl](DEBUG): Construct HorizontalControl.
2018-05-23T23:40:24.496Z,1527118824.496 [HorizontalControl] Loaded
2018-05-23T23:40:24.497Z,1527118824.497 [ComponentRegistry](DEBUG): SyncComponent "HorizontalControl" handled in the control thread.
2018-05-23T23:40:24.497Z,1527118824.497 [SpeedControl](DEBUG): Construct SpeedControl.
2018-05-23T23:40:24.499Z,1527118824.499 [SpeedControl] Loaded
2018-05-23T23:40:24.499Z,1527118824.499 [ComponentRegistry](DEBUG): SyncComponent "SpeedControl" handled in the control thread.
2018-05-23T23:40:24.500Z,1527118824.500 [LoopControl](DEBUG): Construct LoopControl.
2018-05-23T23:40:24.500Z,1527118824.500 [LoopControl] Loaded
2018-05-23T23:40:24.501Z,1527118824.501 [ComponentRegistry](DEBUG): SyncComponent "LoopControl" handled in the control thread.
2018-05-23T23:40:24.501Z,1527118824.501 [Module Loader](DEBUG): Loaded Module: Control (Contains the Control components, such as Depth, Heading, and Speed Control)
2018-05-23T23:40:24.502Z,1527118824.502 [Module Loader](DEBUG): Loading Module at Modules/Trigger.so
2018-05-23T23:40:24.525Z,1527118824.525 [Module Loader](DEBUG): Loaded Module: Trigger (Contains triggers for use in missions)
2018-05-23T23:40:24.525Z,1527118824.525 [Module Loader](DEBUG): Loading Module at Modules/Navigation.so
2018-05-23T23:40:24.612Z,1527118824.612 [DeadReckonUsingSpeedCalculator] Loaded
2018-05-23T23:40:24.612Z,1527118824.612 [ComponentRegistry](DEBUG): SyncComponent "DeadReckonUsingSpeedCalculator" handled in the control thread.
2018-05-23T23:40:24.665Z,1527118824.665 [DeadReckonWithRespectToSeafloor] Loaded
2018-05-23T23:40:24.665Z,1527118824.665 [ComponentRegistry](DEBUG): SyncComponent "DeadReckonWithRespectToSeafloor" handled in the control thread.
2018-05-23T23:40:24.681Z,1527118824.681 [NavChart] Loaded
2018-05-23T23:40:24.682Z,1527118824.682 [ComponentRegistry](DEBUG): SyncComponent "NavChart" handled in the control thread.
2018-05-23T23:40:24.686Z,1527118824.686 [UniversalFixResidualReporter] Loaded
2018-05-23T23:40:24.686Z,1527118824.686 [ComponentRegistry](DEBUG): SyncComponent "UniversalFixResidualReporter" handled in the control thread.
2018-05-23T23:40:24.686Z,1527118824.686 [Module Loader](DEBUG): Loaded Module: Navigation (Contains the base navigation components)
2018-05-23T23:40:24.690Z,1527118824.690 [ComponentRegistry](DEBUG): SyncComponent "MissionManager" handled in the control thread.
2018-05-23T23:40:24.691Z,1527118824.691 [ComponentRegistry](DEBUG): SyncComponent "Reporter" handled in the control thread.
2018-05-23T23:40:24.697Z,1527118824.697 [ComponentRegistry](DEBUG): Component "NavChartDb" handled in its own thread.
2018-05-23T23:40:24.698Z,1527118824.698 [NavChartDb ThreadHandler](DEBUG): Created PCaller Thread at 40A304E0
2018-05-23T23:40:24.699Z,1527118824.699 [NavChartDb ThreadHandler](INFO): Protected caller Thread ID is 5999
2018-05-23T23:40:24.703Z,1527118824.703 [Supervisor](INFO): Main Thread ID is 797
2018-05-23T23:40:24.703Z,1527118824.703 [Supervisor](DEBUG): Running supervisor.
2018-05-23T23:40:24.704Z,1527118824.704 [CommandLine ThreadHandler](INFO): Handler Thread ID is 6000
2018-05-23T23:40:24.706Z,1527118824.706 [controlThread ThreadHandler](INFO): Handler Thread ID is 6001
2018-05-23T23:40:24.707Z,1527118824.707 [controlThread](DEBUG): Initializing ControlThread
2018-05-23T23:40:24.707Z,1527118824.707 [DepthRateCalculator](DEBUG): Initializing DepthRateCalculator.
2018-05-23T23:40:24.708Z,1527118824.708 [PitchRateCalculator](DEBUG): Initializing PitchRateCalculator.
2018-05-23T23:40:24.708Z,1527118824.708 [SpeedCalculator](DEBUG): Initializing SpeedCalculator.
2018-05-23T23:40:24.708Z,1527118824.708 [TempGradientCalculator](DEBUG): Initializing TempGradientCalculator.
2018-05-23T23:40:24.709Z,1527118824.709 [VerticalTemperatureHomogeneityIndexCalculator](DEBUG): (re)initializing
2018-05-23T23:40:24.710Z,1527118824.710 [YawRateCalculator](DEBUG): Initializing YawRateCalculator.
2018-05-23T23:40:24.710Z,1527118824.710 [ElevatorOffsetCalculator](DEBUG): Initializing ElevatorOffsetCalculator.
2018-05-23T23:40:24.716Z,1527118824.716 [SBIT](INFO): Initialize SBIT Component.
2018-05-23T23:40:24.717Z,1527118824.717 [SBIT](IMPORTANT): git: 2018-05-17
2018-05-23T23:40:24.717Z,1527118824.717 [SBIT](INFO): git hash: 418d027d9554c4aed44cef59bd1b73332cce0e52
2018-05-23T23:40:24.718Z,1527118824.718 [SBIT](IMPORTANT): Kernel Release: 2.6.27.8
2018-05-23T23:40:24.719Z,1527118824.719 [SBIT](INFO): Kernel Reporting Different Version From Configuration.
Kernel Expected: #639 PREEMPT Wed Mar 12 12:53:33 PDT 2014
Kernel Reported: #2 PREEMPT Thu Jan 11 20:13:48 PST 2018
2018-05-23T23:40:24.720Z,1527118824.720 [SBIT](INFO): Beginning SBIT in 23.000000 seconds.
2018-05-23T23:40:24.720Z,1527118824.720 [IBIT](INFO): Initialize IBIT Component.
2018-05-23T23:40:24.721Z,1527118824.721 [CBIT](DEBUG): Initialize CBIT Component.
2018-05-23T23:40:24.721Z,1527118824.721 [CBIT](INFO): Last reboot was NOT due to watchdog timer.
2018-05-23T23:40:24.722Z,1527118824.722 [logger ThreadHandler](INFO): Handler Thread ID is 6002
2018-05-23T23:40:24.743Z,1527118824.743 [Radio_Surface ThreadHandler](INFO): Handler Thread ID is 6003
2018-05-23T23:40:24.749Z,1527118824.749 [Radio_Surface](INFO): Powering up
2018-05-23T23:40:24.755Z,1527118824.755 [CTD_NeilBrown ThreadHandler](INFO): Handler Thread ID is 6004
2018-05-23T23:40:24.756Z,1527118824.756 [CTD_NeilBrown](INFO): Powering down
2018-05-23T23:40:24.783Z,1527118824.783 [CTD_Seabird ThreadHandler](INFO): Handler Thread ID is 6005
2018-05-23T23:40:24.783Z,1527118824.783 [CTD_Seabird](INFO): Initializing
2018-05-23T23:40:24.784Z,1527118824.784 [CTD_Seabird](INFO): Checking LCM
2018-05-23T23:40:24.793Z,1527118824.793 [CTD_Seabird](INFO): LCM OK
2018-05-23T23:40:24.793Z,1527118824.793 [CTD_Seabird](INFO): Powering up
2018-05-23T23:40:24.803Z,1527118824.803 [WetLabsBB2FL ThreadHandler](INFO): Handler Thread ID is 6006
2018-05-23T23:40:24.804Z,1527118824.804 [WetLabsBB2FL](INFO): Powering down
2018-05-23T23:40:24.831Z,1527118824.831 [VerticalControl](DEBUG): Initialize VerticalControlComponent.
2018-05-23T23:40:24.833Z,1527118824.833 [HorizontalControl](DEBUG): Initialize HorizontalControlComponent.
2018-05-23T23:40:24.833Z,1527118824.833 [SpeedControl](DEBUG): Initialize SpeedControlComponent.
2018-05-23T23:40:24.834Z,1527118824.834 [LoopControl](DEBUG): Initialize LoopControlComponent.
2018-05-23T23:40:24.834Z,1527118824.834 [DeadReckonUsingSpeedCalculator](DEBUG): Initializing DeadReckonUsingSpeedCalculator component.
2018-05-23T23:40:24.835Z,1527118824.835 [DeadReckonUsingSpeedCalculator](INFO): Will consider orientation measurement stale after 120s.
2018-05-23T23:40:24.836Z,1527118824.836 [DeadReckonUsingSpeedCalculator](INFO): Will consider velocity measurement stale after 20s.
2018-05-23T23:40:24.836Z,1527118824.836 [DeadReckonWithRespectToSeafloor](DEBUG): Initializing DeadReckonWithRespectToSeafloor component.
2018-05-23T23:40:24.836Z,1527118824.836 [DeadReckonWithRespectToSeafloor](INFO): Will consider orientation measurement stale after 120s.
2018-05-23T23:40:24.837Z,1527118824.837 [DeadReckonWithRespectToSeafloor](INFO): Will consider velocity measurement stale after 20s.
2018-05-23T23:40:24.837Z,1527118824.837 [NavChart](DEBUG): Initialize NavChart Navigation.
2018-05-23T23:40:24.838Z,1527118824.838 [UniversalFixResidualReporter](DEBUG): Initializing UniversalFixResidualReporter component.
2018-05-23T23:40:24.839Z,1527118824.839 [MissionManager](INFO): Loading Mission: Missions/Startup.xml
2018-05-23T23:40:24.851Z,1527118824.851 [NavChartDb ThreadHandler](INFO): Handler Thread ID is 6007
2018-05-23T23:40:24.854Z,1527118824.854 [NavChartDb](INFO): Looking for Electronic Nav Chart file at: Resources/ElectronicNavigationCharts/US1WC07M.000
2018-05-23T23:40:24.854Z,1527118824.854 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US1WC07M.000
2018-05-23T23:40:24.854Z,1527118824.854 [NavChartDb](INFO): Looking for Electronic Nav Chart file at: Resources/ElectronicNavigationCharts/US2WC11M.000
2018-05-23T23:40:24.854Z,1527118824.854 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US2WC11M.000
2018-05-23T23:40:24.855Z,1527118824.855 [NavChartDb](INFO): Looking for Electronic Nav Chart file at: Resources/ElectronicNavigationCharts/US3CA52M.000
2018-05-23T23:40:24.855Z,1527118824.855 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US3CA52M.000
2018-05-23T23:40:24.855Z,1527118824.855 [NavChartDb](INFO): Looking for Electronic Nav Chart file at: Resources/ElectronicNavigationCharts/US4CA60M.000
2018-05-23T23:40:24.855Z,1527118824.855 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US4CA60M.000
2018-05-23T23:40:24.855Z,1527118824.855 [NavChartDb](INFO): Looking for Electronic Nav Chart file at: Resources/ElectronicNavigationCharts/US5CA50M.000
2018-05-23T23:40:24.856Z,1527118824.856 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA50M.000
2018-05-23T23:40:24.856Z,1527118824.856 [NavChartDb](INFO): Looking for Electronic Nav Chart file at: Resources/ElectronicNavigationCharts/US5CA61M.000
2018-05-23T23:40:24.856Z,1527118824.856 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA61M.000
2018-05-23T23:40:24.856Z,1527118824.856 [NavChartDb](INFO): Looking for Electronic Nav Chart file at: Resources/ElectronicNavigationCharts/US5CA62M.000
2018-05-23T23:40:24.856Z,1527118824.856 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA62M.000
2018-05-23T23:40:24.857Z,1527118824.857 [NavChartDb](INFO): Looking for Electronic Nav Chart file at: Resources/ElectronicNavigationCharts/US5CA83M.000
2018-05-23T23:40:24.857Z,1527118824.857 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA83M.000
2018-05-23T23:40:24.883Z,1527118824.883 [Startup:A.GoToSurface](DEBUG): Construct GoToSurface.
2018-05-23T23:40:24.930Z,1527118824.930 [MissionManager](DEBUG): 
<?xml version="1.0" encoding="UTF-8"?>
<Mission xmlns="Tethys"
       xmlns:Control="Tethys/Control"
       xmlns:Guidance="Tethys/Guidance" 
       xmlns:Units="Tethys/Units"
       xmlns:Universal="Tethys/Universal"
       xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
       xsi:schemaLocation="Tethys http://okeanids.mbari.org/tethys/Xml/Tethys.xsd
                           Tethys/Control http://okeanids.mbari.org/tethys/Xml/Control.xsd
                           Tethys/Guidance http://okeanids.mbari.org/tethys/Xml/Guidance.xsd
                           Tethys/Units http://okeanids.mbari.org/tethys/Xml/Units.xsd
                           Tethys/Universal http://okeanids.mbari.org/tethys/Xml/Universal.xsd"
       Id="Startup">

    <Guidance:GoToSurface>
        <Progression/>
    </Guidance:GoToSurface>

    <Aggregate Id="StartupSatComms">

        <Sequence/>

        <ReadDatum>
            <Timeout Duration="P1M" />
            <Universal:latitude_fix/>
        </ReadDatum>

        <ReadDatum>
            <Timeout Duration="P1M" />
            <Universal:platform_communications/>
        </ReadDatum>

    </Aggregate>

</Mission>


2018-05-23T23:40:24.931Z,1527118824.931 [MissionManager](INFO): Loading Mission: Missions/Default.xml
2018-05-23T23:40:25.004Z,1527118825.004 [MissionManager](INFO): DefineArg Default.ElapsedSinceDefaultStarted = 0.000000 min
2018-05-23T23:40:25.006Z,1527118825.006 [Default:A.Wait](DEBUG): Construct Wait.
2018-05-23T23:40:25.007Z,1527118825.007 [Default:B.GoToSurface](DEBUG): Construct GoToSurface.
2018-05-23T23:40:25.050Z,1527118825.050 [Default:CheckIn:Read_Iridium:A_Timeout:A.Execute](DEBUG): Construct Execute.
2018-05-23T23:40:25.053Z,1527118825.053 [Default:CheckIn:C.Wait](DEBUG): Construct Wait.
2018-05-23T23:40:25.070Z,1527118825.070 [Default:E.Execute](DEBUG): Construct Execute.
2018-05-23T23:40:25.074Z,1527118825.074 [MissionManager](DEBUG): 
<?xml version="1.0" encoding="UTF-8"?>
<Mission xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
         xmlns="Tethys"
         xmlns:Units="Tethys/Units"
         xmlns:Guidance="Tethys/Guidance"
         xmlns:Universal="Tethys/Universal"
         xsi:schemaLocation="Tethys http://okeanids.mbari.org/tethys/Xml/Tethys.xsd
                             Tethys/Units http://okeanids.mbari.org/tethys/Xml/Units.xsd
                             Tethys/Guidance http://okeanids.mbari.org/tethys/Xml/Guidance.xsd
                             Tethys/Universal http://okeanids.mbari.org/tethys/Xml/Universal.xsd"
         Id="Default">

    <DefineArg Name="ElapsedSinceDefaultStarted"><Units:minute/><Value>0</Value></DefineArg>

    <Guidance:Wait>
        <Description>
            Wait a moment to see if the scheduler starts a new mission before
            starting to actually run Default.
        </Description>
        <Sequence/>
        <Setting><Guidance:Wait.duration/><Units:second/><Value>13</Value></Setting>
    </Guidance:Wait>

    <Guidance:GoToSurface>
        <Progression/>
    </Guidance:GoToSurface>

    <Aggregate Id="CheckIn">

        <Sequence Repeat="288"/>

        <ReadDatum Id="Read_GPS">
            <Timeout Duration="P5M"/>
            <Universal:time_fix/>
        </ReadDatum>

        <ReadDatum Id="Read_Iridium">
            <Timeout Duration="P2H">
                <Guidance:Execute>
                    <Sequence/>
                    <Setting><Guidance:Execute.command/><String>Burn 300</String></Setting>
                </Guidance:Execute>
                <Syslog Severity="Critical">Dropped weight due to communications timeout.</Syslog>
            </Timeout>
            <Universal:platform_communications/>
        </ReadDatum>

        <Guidance:Wait>
            <Sequence/>
            <Setting><Guidance:Wait.duration/><Units:minute/><Value>5</Value></Setting>
        </Guidance:Wait>

        <Assign><Sequence/><Arg Name="ElapsedSinceDefaultStarted"/><Elapsed><Universal:mission_started/></Elapsed></Assign>

        <Syslog Severity="Important">Default mission has been running for <Arg Name="ElapsedSinceDefaultStarted"/><Units:minute/></Syslog>

    </Aggregate>

    <Syslog Severity="Important">Restarting logs and Default mission.</Syslog>

    <Guidance:Execute>
        <Sequence/>
        <Setting><Guidance:Execute.command/><String>restart logs</String></Setting>
    </Guidance:Execute>

</Mission>


2018-05-23T23:40:25.111Z,1527118825.111 [controlThread](DEBUG): Component order: CycleStarter,DataOverHttps,Depth_Keller,DropWeight,Onboard,PNI_TCM,BPC1,Aanderaa_O2,CANONSampler,ESPComponent,PAR_Licor,Depth_Keller,PAR_Licor,DepthRateCalculator,PitchRateCalculator,SpeedCalculator,TempGradientCalculator,VerticalTemperatureHomogeneityIndexCalculator,YawRateCalculator,ElevatorOffsetCalculator,StratificationFrontDetector,DeadReckonUsingSpeedCalculator,DeadReckonWithRespectToSeafloor,NavChart,UniversalFixResidualReporter,MissionManager,VerticalControl,HorizontalControl,SpeedControl,LoopControl,BuoyancyServo,ElevatorServo,MassServo,RudderServo,ThrusterServo,SBIT,IBIT,CBIT,Reporter,LogSplitter,
2018-05-23T23:40:25.143Z,1527118825.143 [DataOverHttps](DEBUG): dashIP=134.89.2.23 starts with a digit so assuming it is a numeric IP
2018-05-23T23:40:25.152Z,1527118825.152 [Depth_Keller](ERROR): Pressure reading out of range: 1831.023193 decibar
2018-05-23T23:40:25.389Z,1527118825.389 [CANONSampler](INFO): Powering down
2018-05-23T23:40:25.635Z,1527118825.635 [DepthRateCalculator](ERROR): Depth measurement is not active
2018-05-23T23:40:25.739Z,1527118825.739 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2018-05-23T23:40:25.755Z,1527118825.755 [DeadReckonWithRespectToSeafloor](DEBUG): Starting up and don't have orientation data yet.
2018-05-23T23:40:25.847Z,1527118825.847 [BuoyancyServo](DEBUG): Initializing EZServoServo.
2018-05-23T23:40:25.855Z,1527118825.855 [BuoyancyServo](DEBUG): Initializing BuoyancyServo.
2018-05-23T23:40:25.877Z,1527118825.877 [ElevatorServo](DEBUG): Initializing EZServoServo.
2018-05-23T23:40:25.883Z,1527118825.883 [ElevatorServo](DEBUG): Initializing ElevatorServo.
2018-05-23T23:40:25.888Z,1527118825.888 [MassServo](DEBUG): Initializing EZServoServo.
2018-05-23T23:40:25.895Z,1527118825.895 [MassServo](DEBUG): Initializing MassServo.
2018-05-23T23:40:25.920Z,1527118825.920 [RudderServo](DEBUG): Initializing EZServoServo.
2018-05-23T23:40:25.926Z,1527118825.926 [RudderServo](DEBUG): Initializing RudderServo.
2018-05-23T23:40:25.932Z,1527118825.932 [ThrusterServo](DEBUG): Initializing EZServoServo.
2018-05-23T23:40:25.938Z,1527118825.938 [ThrusterServo](DEBUG): Initializing ThrusterServo.
2018-05-23T23:40:26.205Z,1527118826.205 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2018-05-23T23:40:26.206Z,1527118826.206 [DeadReckonWithRespectToSeafloor](DEBUG): Starting up and don't have orientation data yet.
2018-05-23T23:40:26.472Z,1527118826.472 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2018-05-23T23:40:26.473Z,1527118826.473 [DeadReckonWithRespectToSeafloor](DEBUG): Starting up and don't have orientation data yet.
2018-05-23T23:40:26.963Z,1527118826.963 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2018-05-23T23:40:26.964Z,1527118826.964 [DeadReckonWithRespectToSeafloor](DEBUG): Starting up and don't have orientation data yet.
2018-05-23T23:40:27.384Z,1527118827.384 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2018-05-23T23:40:27.385Z,1527118827.385 [DeadReckonWithRespectToSeafloor](DEBUG): Starting up and don't have orientation data yet.
2018-05-23T23:40:27.778Z,1527118827.778 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2018-05-23T23:40:27.779Z,1527118827.779 [DeadReckonWithRespectToSeafloor](DEBUG): Starting up and don't have orientation data yet.
2018-05-23T23:40:28.166Z,1527118828.166 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2018-05-23T23:40:28.167Z,1527118828.167 [DeadReckonWithRespectToSeafloor](DEBUG): Starting up and don't have orientation data yet.
2018-05-23T23:40:28.666Z,1527118828.666 [Aanderaa_O2](INFO): Powering down
2018-05-23T23:40:28.758Z,1527118828.758 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2018-05-23T23:40:28.775Z,1527118828.775 [DeadReckonWithRespectToSeafloor](DEBUG): Starting up and don't have orientation data yet.
2018-05-23T23:40:30.331Z,1527118830.331 [CTD_Seabird](INFO): Stopping potential previous instance(s) of CTD_Seabird LCM interface
2018-05-23T23:40:30.449Z,1527118830.449 [CTD_Seabird](INFO): Started Seabird LCM interface with command:nohup ./lrauv-framework/onboard/bin/gpctd -ldir /mnt/mmc/LRAUV/Logs/latest/ -dev /dev/ttyC6 -b 9600 >& /dev/null &
2018-05-23T23:40:30.495Z,1527118830.495 [CTD_Seabird](INFO): LCM subscribed to channel:ctd_t.seabird-gpctd
2018-05-23T23:40:30.869Z,1527118830.869 [CTD_Seabird](INFO): Stopping potential previous instance(s) of CTD_Seabird LCM interface
2018-05-23T23:40:30.870Z,1527118830.870 [CTD_Seabird](INFO): Powering down
2018-05-23T23:40:48.316Z,1527118848.316 [SBIT](IMPORTANT): Beginning Startup BIT
2018-05-23T23:40:48.328Z,1527118848.328 [CBIT](IMPORTANT): Beginning ground fault scan
2018-05-23T23:40:59.230Z,1527118859.230 [CBIT](IMPORTANT): Ground fault detected
mA:
CHAN A0 (Batt): -0.001588
CHAN A1 (24V): 4.657929
CHAN A2 (12V): -0.001944
CHAN A3 (5V): -0.001347
CHAN B0 (3.3V): -0.000180
CHAN B1 (3.15aV): -0.000304
CHAN B2 (3.15bV): -0.000661
CHAN B3 (GND): 0.000408
OPEN: -0.000351
Full Scale Calc: 4.765 mA, -1.589 mA
2018-05-23T23:41:12.945Z,1527118872.945 [CommandLine](IMPORTANT): got command configSet list
2018-05-23T23:41:12.945Z,1527118872.945 [CommandLine](IMPORTANT): Listing configuration overrides from Data/persisted.cfg
2018-05-23T23:41:12.947Z,1527118872.947 [CommandLine](IMPORTANT): ESPComponent.loadAtStartup=1 bool;

2018-05-23T23:41:12.947Z,1527118872.947 [CommandLine](IMPORTANT): ESPComponent.simulateHardware=1 bool;

2018-05-23T23:41:12.948Z,1527118872.948 [CommandLine](IMPORTANT): NAL9602.loadAtStartup=0 bool;

2018-05-23T23:41:12.948Z,1527118872.948 [CommandLine](IMPORTANT): Normal linearApproximation CTD_NeilBrown.bin_mean_sea_water_salinity 0.020000 practical_salinity_unit;

2018-05-23T23:41:12.948Z,1527118872.948 [CommandLine](IMPORTANT): Normal linearApproximation CTD_NeilBrown.bin_mean_sea_water_temperature 0.150000 kelvin;

2018-05-23T23:41:12.949Z,1527118872.949 [CommandLine