2018-02-01T01:04:43.123Z,1517447083.123 [Supervisor](DEBUG): Initializing supervisor.
2018-02-01T01:04:43.126Z,1517447083.126 [SyncHandler](DEBUG): Created PCaller Thread at 404514E0
2018-02-01T01:04:43.127Z,1517447083.127 [SyncHandler](INFO): Protected caller Thread ID is 983
2018-02-01T01:04:43.127Z,1517447083.127 [ComponentRegistry](DEBUG): Component "controlThread" handled in its own thread.
2018-02-01T01:04:43.128Z,1517447083.128 [controlThread ThreadHandler](DEBUG): Created PCaller Thread at 404814E0
2018-02-01T01:04:43.129Z,1517447083.129 [controlThread ThreadHandler](INFO): Protected caller Thread ID is 984
2018-02-01T01:04:43.143Z,1517447083.143 [ComponentRegistry](DEBUG): SyncComponent "CycleStarter" handled in the control thread.
2018-02-01T01:04:43.155Z,1517447083.155 [ComponentRegistry](DEBUG): Component "CommandLine" handled in its own thread.
2018-02-01T01:04:43.156Z,1517447083.156 [CommandLine ThreadHandler](DEBUG): Created PCaller Thread at 404B14E0
2018-02-01T01:04:43.156Z,1517447083.156 [CommandLine ThreadHandler](INFO): Protected caller Thread ID is 985
2018-02-01T01:04:43.157Z,1517447083.157 [ComponentRegistry](DEBUG): Component "logger" handled in its own thread.
2018-02-01T01:04:43.158Z,1517447083.158 [logger ThreadHandler](DEBUG): Created PCaller Thread at 404E14E0
2018-02-01T01:04:43.158Z,1517447083.158 [logger ThreadHandler](INFO): Protected caller Thread ID is 986
2018-02-01T01:04:43.160Z,1517447083.160 [ComponentRegistry](DEBUG): SyncComponent "LogSplitter" handled in the control thread.
2018-02-01T01:04:43.160Z,1517447083.160 [Supervisor](INFO): Looking for Config files in directory: Config/
2018-02-01T01:04:43.162Z,1517447083.162 [Supervisor](INFO): Opening Config file at: Config/Control.cfg
2018-02-01T01:04:43.542Z,1517447083.542 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Control
2018-02-01T01:04:43.542Z,1517447083.542 [Supervisor](INFO): Opening Config file at: Config/logger.cfg
2018-02-01T01:04:43.724Z,1517447083.724 [ComponentRegistry](DEBUG): Loaded Config Component "Config/logger
2018-02-01T01:04:43.725Z,1517447083.725 [Supervisor](INFO): Opening Config file at: Config/Servo.cfg
2018-02-01T01:04:43.985Z,1517447083.985 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Servo
2018-02-01T01:04:43.986Z,1517447083.986 [Supervisor](INFO): Opening Config file at: Config/Derivation.cfg
2018-02-01T01:04:44.120Z,1517447084.120 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Derivation
2018-02-01T01:04:44.120Z,1517447084.120 [Supervisor](INFO): Opening Config file at: Config/Sample.cfg
2018-02-01T01:04:44.216Z,1517447084.216 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Sample
2018-02-01T01:04:44.217Z,1517447084.217 [Supervisor](INFO): Opening Config file at: Config/Simulator.cfg
2018-02-01T01:04:44.640Z,1517447084.640 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Simulator
2018-02-01T01:04:44.640Z,1517447084.640 [Supervisor](INFO): Opening Config file at: Config/Sensor.cfg
2018-02-01T01:04:44.958Z,1517447084.958 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Sensor
2018-02-01T01:04:44.959Z,1517447084.959 [Supervisor](INFO): Opening Config file at: Config/vehicle.cfg
2018-02-01T01:04:45.447Z,1517447085.447 [ComponentRegistry](DEBUG): Loaded Config Component "Config/vehicle
2018-02-01T01:04:45.448Z,1517447085.448 [Supervisor](INFO): Opening Config file at: Config/workSite.cfg
2018-02-01T01:04:45.549Z,1517447085.549 [ComponentRegistry](DEBUG): Loaded Config Component "Config/workSite
2018-02-01T01:04:45.550Z,1517447085.550 [Supervisor](INFO): Opening Config file at: Config/secure.cfg
2018-02-01T01:04:45.643Z,1517447085.643 [ComponentRegistry](DEBUG): Loaded Config Component "Config/secure
2018-02-01T01:04:45.644Z,1517447085.644 [Supervisor](INFO): Opening Config file at: Config/Navigation.cfg
2018-02-01T01:04:45.834Z,1517447085.834 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Navigation
2018-02-01T01:04:45.835Z,1517447085.835 [Supervisor](INFO): Opening Config file at: Config/BIT.cfg
2018-02-01T01:04:46.021Z,1517447086.021 [ComponentRegistry](DEBUG): Loaded Config Component "Config/BIT
2018-02-01T01:04:46.022Z,1517447086.022 [Supervisor](INFO): Opening Config file at: Config/Science.cfg
2018-02-01T01:04:46.332Z,1517447086.332 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Science
2018-02-01T01:04:46.332Z,1517447086.332 [Supervisor](INFO): Opening Config file at: Config/Estimation.cfg
2018-02-01T01:04:46.467Z,1517447086.467 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Estimation
2018-02-01T01:04:46.468Z,1517447086.468 [Supervisor](INFO): Opening Config file at: Config/Guidance.cfg
2018-02-01T01:04:46.548Z,1517447086.548 [Supervisor](INFO): Looking for Config files in directory: Config/lrauv-daphne/
2018-02-01T01:04:46.549Z,1517447086.549 [Supervisor](INFO): Opening Config file at: Config/lrauv-daphne/Control.cfg
2018-02-01T01:04:46.730Z,1517447086.730 [Supervisor](INFO): Opening Config file at: Config/lrauv-daphne/logger.cfg
2018-02-01T01:04:47.117Z,1517447087.117 [Supervisor](INFO): Opening Config file at: Config/lrauv-daphne/Servo.cfg
2018-02-01T01:04:47.209Z,1517447087.209 [Supervisor](INFO): Opening Config file at: Config/lrauv-daphne/Simulator.cfg
2018-02-01T01:04:47.292Z,1517447087.292 [Supervisor](INFO): Opening Config file at: Config/lrauv-daphne/Sensor.cfg
2018-02-01T01:04:47.432Z,1517447087.432 [Supervisor](INFO): Opening Config file at: Config/lrauv-daphne/vehicle.cfg
2018-02-01T01:04:47.594Z,1517447087.594 [Supervisor](INFO): Opening Config file at: Config/lrauv-daphne/workSite.cfg
2018-02-01T01:04:47.669Z,1517447087.669 [Supervisor](INFO): Opening Config file at: Config/lrauv-daphne/Battery.cfg
2018-02-01T01:04:47.887Z,1517447087.887 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Battery
2018-02-01T01:04:47.888Z,1517447087.888 [Supervisor](INFO): Opening Config file at: Config/lrauv-daphne/secure.cfg
2018-02-01T01:04:47.970Z,1517447087.970 [Supervisor](INFO): Opening Config file at: Config/lrauv-daphne/Navigation.cfg
2018-02-01T01:04:48.057Z,1517447088.057 [Supervisor](INFO): Opening Config file at: Config/lrauv-daphne/BIT.cfg
2018-02-01T01:04:48.154Z,1517447088.154 [Supervisor](INFO): Opening Config file at: Config/lrauv-daphne/Science.cfg
2018-02-01T01:04:48.275Z,1517447088.275 [Supervisor](INFO): Looking for Config files in directory: Config/lrauv-daphne/root/
2018-02-01T01:04:48.275Z,1517447088.275 [Supervisor](IMPORTANT): Reading configuration overrides from Data/persisted.cfg
2018-02-01T01:04:48.281Z,1517447088.281 [Module Loader](DEBUG): Loading Module at Modules/Guidance.so
2018-02-01T01:04:48.517Z,1517447088.517 [Module Loader](DEBUG): Loaded Module: Guidance (Contains behaviors and commands)
2018-02-01T01:04:48.517Z,1517447088.517 [Module Loader](DEBUG): Loading Module at Modules/Derivation.so
2018-02-01T01:04:48.559Z,1517447088.559 [DepthRateCalculator] Loaded
2018-02-01T01:04:48.559Z,1517447088.559 [ComponentRegistry](DEBUG): SyncComponent "DepthRateCalculator" handled in the control thread.
2018-02-01T01:04:48.565Z,1517447088.565 [PitchRateCalculator] Loaded
2018-02-01T01:04:48.565Z,1517447088.565 [ComponentRegistry](DEBUG): SyncComponent "PitchRateCalculator" handled in the control thread.
2018-02-01T01:04:48.580Z,1517447088.580 [SpeedCalculator] Loaded
2018-02-01T01:04:48.581Z,1517447088.581 [ComponentRegistry](DEBUG): SyncComponent "SpeedCalculator" handled in the control thread.
2018-02-01T01:04:48.601Z,1517447088.601 [TempGradientCalculator] Loaded
2018-02-01T01:04:48.602Z,1517447088.602 [ComponentRegistry](DEBUG): SyncComponent "TempGradientCalculator" handled in the control thread.
2018-02-01T01:04:48.616Z,1517447088.616 [VerticalTemperatureHomogeneityIndexCalculator] Loaded
2018-02-01T01:04:48.617Z,1517447088.617 [ComponentRegistry](DEBUG): SyncComponent "VerticalTemperatureHomogeneityIndexCalculator" handled in the control thread.
2018-02-01T01:04:48.622Z,1517447088.622 [YawRateCalculator] Loaded
2018-02-01T01:04:48.622Z,1517447088.622 [ComponentRegistry](DEBUG): SyncComponent "YawRateCalculator" handled in the control thread.
2018-02-01T01:04:48.623Z,1517447088.623 [Module Loader](DEBUG): Loaded Module: Derivation (Contains the base derivation components)
2018-02-01T01:04:48.623Z,1517447088.623 [Module Loader](DEBUG): Loading Module at Modules/Estimation.so
2018-02-01T01:04:48.706Z,1517447088.706 [StratificationFrontDetector](INFO): threshold set to: 0.399988 degC
2018-02-01T01:04:48.707Z,1517447088.707 [StratificationFrontDetector](DEBUG): (re)initializing
2018-02-01T01:04:48.707Z,1517447088.707 [StratificationFrontDetector] Loaded
2018-02-01T01:04:48.707Z,1517447088.707 [ComponentRegistry](DEBUG): SyncComponent "StratificationFrontDetector" handled in the control thread.
2018-02-01T01:04:48.708Z,1517447088.708 [Module Loader](DEBUG): Loaded Module: Estimation (Contains the base estimation components)
2018-02-01T01:04:48.708Z,1517447088.708 [Module Loader](DEBUG): Loading Module at Modules/Servo.so
2018-02-01T01:04:48.817Z,1517447088.817 [BuoyancyServo] Loaded
2018-02-01T01:04:48.817Z,1517447088.817 [ComponentRegistry](DEBUG): SyncComponent "BuoyancyServo" handled in the control thread.
2018-02-01T01:04:48.832Z,1517447088.832 [ElevatorServo] Loaded
2018-02-01T01:04:48.832Z,1517447088.832 [ComponentRegistry](DEBUG): SyncComponent "ElevatorServo" handled in the control thread.
2018-02-01T01:04:48.846Z,1517447088.846 [MassServo] Loaded
2018-02-01T01:04:48.846Z,1517447088.846 [ComponentRegistry](DEBUG): SyncComponent "MassServo" handled in the control thread.
2018-02-01T01:04:48.860Z,1517447088.860 [RudderServo] Loaded
2018-02-01T01:04:48.861Z,1517447088.861 [ComponentRegistry](DEBUG): SyncComponent "RudderServo" handled in the control thread.
2018-02-01T01:04:48.874Z,1517447088.874 [ThrusterServo] Loaded
2018-02-01T01:04:48.874Z,1517447088.874 [ComponentRegistry](DEBUG): SyncComponent "ThrusterServo" handled in the control thread.
2018-02-01T01:04:48.875Z,1517447088.875 [Module Loader](DEBUG): Loaded Module: Servo (This is the module containing motor controllers)
2018-02-01T01:04:48.875Z,1517447088.875 [Module Loader](DEBUG): Loading Module at Modules/Sample.so
2018-02-01T01:04:48.889Z,1517447088.889 [Module Loader](DEBUG): Loaded Module: Sample (This is a Sample Module of Sample Components)
2018-02-01T01:04:48.890Z,1517447088.890 [Module Loader](DEBUG): Loading Module at Modules/Simulator.so
2018-02-01T01:04:48.986Z,1517447088.986 [Module Loader](DEBUG): Loaded Module: Simulator (This is the module containing the Simulator)
2018-02-01T01:04:48.986Z,1517447088.986 [Module Loader](DEBUG): Loading Module at Modules/Sensor.so
2018-02-01T01:04:49.601Z,1517447089.601 [DataOverHttps] Loaded
2018-02-01T01:04:49.601Z,1517447089.601 [ComponentRegistry](DEBUG): SyncComponent "DataOverHttps" handled in the control thread.
2018-02-01T01:04:49.614Z,1517447089.614 [Depth_Keller] Loaded
2018-02-01T01:04:49.615Z,1517447089.615 [ComponentRegistry](DEBUG): SyncComponent "Depth_Keller" handled in the control thread.
2018-02-01T01:04:49.619Z,1517447089.619 [DropWeight] Loaded
2018-02-01T01:04:49.620Z,1517447089.620 [ComponentRegistry](DEBUG): SyncComponent "DropWeight" handled in the control thread.
2018-02-01T01:04:49.714Z,1517447089.714 [NAL9602] Loaded
2018-02-01T01:04:49.714Z,1517447089.714 [ComponentRegistry](DEBUG): SyncComponent "NAL9602" handled in the control thread.
2018-02-01T01:04:49.729Z,1517447089.729 [Onboard] Loaded
2018-02-01T01:04:49.730Z,1517447089.730 [ComponentRegistry](DEBUG): SyncComponent "Onboard" handled in the control thread.
2018-02-01T01:04:49.739Z,1517447089.739 [Radio_Surface] Loaded
2018-02-01T01:04:49.739Z,1517447089.739 [ComponentRegistry](DEBUG): Component "Radio_Surface" handled in its own thread.
2018-02-01T01:04:49.741Z,1517447089.741 [Radio_Surface ThreadHandler](DEBUG): Created PCaller Thread at 4086F4E0
2018-02-01T01:04:49.741Z,1517447089.741 [Radio_Surface ThreadHandler](INFO): Protected caller Thread ID is 1069
2018-02-01T01:04:49.892Z,1517447089.892 [PNI_TCM] Loaded
2018-02-01T01:04:49.892Z,1517447089.892 [ComponentRegistry](DEBUG): SyncComponent "PNI_TCM" handled in the control thread.
2018-02-01T01:04:49.893Z,1517447089.893 [Module Loader](DEBUG): Loaded Module: Sensor (Contains the sensor components)
2018-02-01T01:04:49.893Z,1517447089.893 [Module Loader](DEBUG): Loading Module at Modules/BIT.so
2018-02-01T01:04:50.019Z,1517447090.019 [SBIT](DEBUG): Construct Startup Built In Test.
2018-02-01T01:04:50.043Z,1517447090.043 [SBIT] Loaded
2018-02-01T01:04:50.044Z,1517447090.044 [ComponentRegistry](DEBUG): SyncComponent "SBIT" handled in the control thread.
2018-02-01T01:04:50.044Z,1517447090.044 [IBIT](DEBUG): Construct Initiated Built In Test.
2018-02-01T01:04:50.056Z,1517447090.056 [IBIT] Loaded
2018-02-01T01:04:50.056Z,1517447090.056 [ComponentRegistry](DEBUG): SyncComponent "IBIT" handled in the control thread.
2018-02-01T01:04:50.059Z,1517447090.059 [CBIT](DEBUG): Construct Continuous Built In Test.
2018-02-01T01:04:50.205Z,1517447090.205 [CBIT] Loaded
2018-02-01T01:04:50.205Z,1517447090.205 [ComponentRegistry](DEBUG): SyncComponent "CBIT" handled in the control thread.
2018-02-01T01:04:50.205Z,1517447090.205 [Module Loader](DEBUG): Loaded Module: BIT (Contains the BuiltInTest components, such as C Built In Test)
2018-02-01T01:04:50.206Z,1517447090.206 [Module Loader](DEBUG): Loading Module at Modules/Science.so
2018-02-01T01:04:50.349Z,1517447090.349 [Aanderaa_O2] Loaded
2018-02-01T01:04:50.349Z,1517447090.349 [ComponentRegistry](DEBUG): SyncComponent "Aanderaa_O2" handled in the control thread.
2018-02-01T01:04:50.361Z,1517447090.361 [CANONSampler] Loaded
2018-02-01T01:04:50.361Z,1517447090.361 [ComponentRegistry](DEBUG): SyncComponent "CANONSampler" handled in the control thread.
2018-02-01T01:04:50.436Z,1517447090.436 [CTD_NeilBrown] Loaded
2018-02-01T01:04:50.436Z,1517447090.436 [ComponentRegistry](DEBUG): Component "CTD_NeilBrown" handled in its own thread.
2018-02-01T01:04:50.437Z,1517447090.437 [CTD_NeilBrown ThreadHandler](DEBUG): Created PCaller Thread at 409364E0
2018-02-01T01:04:50.438Z,1517447090.438 [CTD_NeilBrown ThreadHandler](INFO): Protected caller Thread ID is 1070
2018-02-01T01:04:50.483Z,1517447090.483 [CTD_Seabird] Loaded
2018-02-01T01:04:50.483Z,1517447090.483 [ComponentRegistry](DEBUG): Component "CTD_Seabird" handled in its own thread.
2018-02-01T01:04:50.484Z,1517447090.484 [CTD_Seabird ThreadHandler](DEBUG): Created PCaller Thread at 409664E0
2018-02-01T01:04:50.484Z,1517447090.484 [CTD_Seabird ThreadHandler](INFO): Protected caller Thread ID is 1071
2018-02-01T01:04:50.498Z,1517447090.498 [PAR_Licor] Loaded
2018-02-01T01:04:50.498Z,1517447090.498 [ComponentRegistry](DEBUG): SyncComponent "PAR_Licor" handled in the control thread.
2018-02-01T01:04:50.545Z,1517447090.545 [WetLabsBB2FL] Loaded
2018-02-01T01:04:50.545Z,1517447090.545 [ComponentRegistry](DEBUG): Component "WetLabsBB2FL" handled in its own thread.
2018-02-01T01:04:50.546Z,1517447090.546 [WetLabsBB2FL ThreadHandler](DEBUG): Created PCaller Thread at 409964E0
2018-02-01T01:04:50.546Z,1517447090.546 [WetLabsBB2FL ThreadHandler](INFO): Protected caller Thread ID is 1072
2018-02-01T01:04:50.547Z,1517447090.547 [Module Loader](DEBUG): Loaded Module: Science (Contains the science components)
2018-02-01T01:04:50.547Z,1517447090.547 [Module Loader](DEBUG): Loading Module at Modules/Control.so
2018-02-01T01:04:50.615Z,1517447090.615 [VerticalControl](DEBUG): Construct VerticalControl.
2018-02-01T01:04:50.699Z,1517447090.699 [VerticalControl] Loaded
2018-02-01T01:04:50.699Z,1517447090.699 [ComponentRegistry](DEBUG): SyncComponent "VerticalControl" handled in the control thread.
2018-02-01T01:04:50.700Z,1517447090.700 [HorizontalControl](DEBUG): Construct HorizontalControl.
2018-02-01T01:04:50.755Z,1517447090.755 [HorizontalControl] Loaded
2018-02-01T01:04:50.755Z,1517447090.755 [ComponentRegistry](DEBUG): SyncComponent "HorizontalControl" handled in the control thread.
2018-02-01T01:04:50.756Z,1517447090.756 [SpeedControl](DEBUG): Construct SpeedControl.
2018-02-01T01:04:50.757Z,1517447090.757 [SpeedControl] Loaded
2018-02-01T01:04:50.758Z,1517447090.758 [ComponentRegistry](DEBUG): SyncComponent "SpeedControl" handled in the control thread.
2018-02-01T01:04:50.758Z,1517447090.758 [LoopControl](DEBUG): Construct LoopControl.
2018-02-01T01:04:50.759Z,1517447090.759 [LoopControl] Loaded
2018-02-01T01:04:50.759Z,1517447090.759 [ComponentRegistry](DEBUG): SyncComponent "LoopControl" handled in the control thread.
2018-02-01T01:04:50.760Z,1517447090.760 [Module Loader](DEBUG): Loaded Module: Control (Contains the Control components, such as Depth, Heading, and Speed Control)
2018-02-01T01:04:50.760Z,1517447090.760 [Module Loader](DEBUG): Loading Module at Modules/Trigger.so
2018-02-01T01:04:50.784Z,1517447090.784 [Module Loader](DEBUG): Loaded Module: Trigger (Contains triggers for use in missions)
2018-02-01T01:04:50.785Z,1517447090.785 [Module Loader](DEBUG): Loading Module at Modules/Navigation.so
2018-02-01T01:04:50.875Z,1517447090.875 [DeadReckonUsingSpeedCalculator] Loaded
2018-02-01T01:04:50.875Z,1517447090.875 [ComponentRegistry](DEBUG): SyncComponent "DeadReckonUsingSpeedCalculator" handled in the control thread.
2018-02-01T01:04:50.929Z,1517447090.929 [DeadReckonWithRespectToSeafloor] Loaded
2018-02-01T01:04:50.929Z,1517447090.929 [ComponentRegistry](DEBUG): SyncComponent "DeadReckonWithRespectToSeafloor" handled in the control thread.
2018-02-01T01:04:50.945Z,1517447090.945 [NavChart] Loaded
2018-02-01T01:04:50.945Z,1517447090.945 [ComponentRegistry](DEBUG): SyncComponent "NavChart" handled in the control thread.
2018-02-01T01:04:50.949Z,1517447090.949 [UniversalFixResidualReporter] Loaded
2018-02-01T01:04:50.949Z,1517447090.949 [ComponentRegistry](DEBUG): SyncComponent "UniversalFixResidualReporter" handled in the control thread.
2018-02-01T01:04:50.950Z,1517447090.950 [Module Loader](DEBUG): Loaded Module: Navigation (Contains the base navigation components)
2018-02-01T01:04:50.953Z,1517447090.953 [ComponentRegistry](DEBUG): SyncComponent "MissionManager" handled in the control thread.
2018-02-01T01:04:50.954Z,1517447090.954 [ComponentRegistry](DEBUG): SyncComponent "Reporter" handled in the control thread.
2018-02-01T01:04:50.961Z,1517447090.961 [ComponentRegistry](DEBUG): Component "NavChartDb" handled in its own thread.
2018-02-01T01:04:50.962Z,1517447090.962 [NavChartDb ThreadHandler](DEBUG): Created PCaller Thread at 40A214E0
2018-02-01T01:04:50.962Z,1517447090.962 [NavChartDb ThreadHandler](INFO): Protected caller Thread ID is 1073
2018-02-01T01:04:50.967Z,1517447090.967 [Supervisor](INFO): Main Thread ID is 982
2018-02-01T01:04:50.967Z,1517447090.967 [Supervisor](DEBUG): Running supervisor.
2018-02-01T01:04:50.967Z,1517447090.967 [CommandLine ThreadHandler](INFO): Handler Thread ID is 1074
2018-02-01T01:04:50.970Z,1517447090.970 [controlThread ThreadHandler](INFO): Handler Thread ID is 1075
2018-02-01T01:04:50.971Z,1517447090.971 [controlThread](DEBUG): Initializing ControlThread
2018-02-01T01:04:50.971Z,1517447090.971 [DepthRateCalculator](DEBUG): Initializing DepthRateCalculator.
2018-02-01T01:04:50.972Z,1517447090.972 [PitchRateCalculator](DEBUG): Initializing PitchRateCalculator.
2018-02-01T01:04:50.972Z,1517447090.972 [SpeedCalculator](DEBUG): Initializing SpeedCalculator.
2018-02-01T01:04:50.972Z,1517447090.972 [TempGradientCalculator](DEBUG): Initializing TempGradientCalculator.
2018-02-01T01:04:50.973Z,1517447090.973 [VerticalTemperatureHomogeneityIndexCalculator](DEBUG): (re)initializing
2018-02-01T01:04:50.974Z,1517447090.974 [YawRateCalculator](DEBUG): Initializing YawRateCalculator.
2018-02-01T01:04:50.979Z,1517447090.979 [SBIT](INFO): Initialize SBIT Component.
2018-02-01T01:04:50.979Z,1517447090.979 [SBIT](IMPORTANT): git: 2018-01-24-12-g35243d8
2018-02-01T01:04:50.979Z,1517447090.979 [SBIT](INFO): git hash: 35243d8075f2fa9bd3aa575030d1586c25df9f26
2018-02-01T01:04:50.980Z,1517447090.980 [SBIT](IMPORTANT): Kernel Release: 2.6.27.8
2018-02-01T01:04:50.981Z,1517447090.981 [SBIT](INFO): Kernel Reporting Different Version From Configuration.
Kernel Expected: #639 PREEMPT Wed Mar 12 12:53:33 PDT 2014
Kernel Reported: #2 PREEMPT Thu Jan 11 20:13:48 PST 2018
2018-02-01T01:04:50.982Z,1517447090.982 [SBIT](INFO): Beginning SBIT in 23.000000 seconds.
2018-02-01T01:04:50.982Z,1517447090.982 [IBIT](INFO): Initialize IBIT Component.
2018-02-01T01:04:50.983Z,1517447090.983 [CBIT](DEBUG): Initialize CBIT Component.
2018-02-01T01:04:50.983Z,1517447090.983 [CBIT](INFO): Last reboot was NOT due to watchdog timer.
2018-02-01T01:04:50.984Z,1517447090.984 [logger ThreadHandler](INFO): Handler Thread ID is 1076
2018-02-01T01:04:51.001Z,1517447091.001 [Radio_Surface ThreadHandler](INFO): Handler Thread ID is 1077
2018-02-01T01:04:51.007Z,1517447091.007 [Radio_Surface](INFO): Powering up
2018-02-01T01:04:51.013Z,1517447091.013 [CTD_NeilBrown ThreadHandler](INFO): Handler Thread ID is 1078
2018-02-01T01:04:51.014Z,1517447091.014 [CTD_NeilBrown](INFO): Powering down
2018-02-01T01:04:51.045Z,1517447091.045 [CTD_Seabird ThreadHandler](INFO): Handler Thread ID is 1079
2018-02-01T01:04:51.046Z,1517447091.046 [CTD_Seabird](INFO): Initializing
2018-02-01T01:04:51.046Z,1517447091.046 [CTD_Seabird](INFO): Checking LCM
2018-02-01T01:04:51.145Z,1517447091.145 [WetLabsBB2FL ThreadHandler](INFO): Handler Thread ID is 1080
2018-02-01T01:04:51.146Z,1517447091.146 [WetLabsBB2FL](INFO): Powering down
2018-02-01T01:04:51.147Z,1517447091.147 [VerticalControl](DEBUG): Initialize VerticalControlComponent.
2018-02-01T01:04:51.149Z,1517447091.149 [HorizontalControl](DEBUG): Initialize HorizontalControlComponent.
2018-02-01T01:04:51.150Z,1517447091.150 [SpeedControl](DEBUG): Initialize SpeedControlComponent.
2018-02-01T01:04:51.150Z,1517447091.150 [LoopControl](DEBUG): Initialize LoopControlComponent.
2018-02-01T01:04:51.151Z,1517447091.151 [NavChartDb ThreadHandler](INFO): Handler Thread ID is 1081
2018-02-01T01:04:51.159Z,1517447091.159 [NavChartDb](INFO): Looking for Electronic Nav Chart file at: Resources/ElectronicNavigationCharts/US1WC07M.000
2018-02-01T01:04:51.159Z,1517447091.159 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US1WC07M.000
2018-02-01T01:04:51.160Z,1517447091.160 [NavChartDb](INFO): Looking for Electronic Nav Chart file at: Resources/ElectronicNavigationCharts/US2WC11M.000
2018-02-01T01:04:51.160Z,1517447091.160 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US2WC11M.000
2018-02-01T01:04:51.160Z,1517447091.160 [NavChartDb](INFO): Looking for Electronic Nav Chart file at: Resources/ElectronicNavigationCharts/US3CA52M.000
2018-02-01T01:04:51.160Z,1517447091.160 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US3CA52M.000
2018-02-01T01:04:51.161Z,1517447091.161 [NavChartDb](INFO): Looking for Electronic Nav Chart file at: Resources/ElectronicNavigationCharts/US4CA60M.000
2018-02-01T01:04:51.161Z,1517447091.161 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US4CA60M.000
2018-02-01T01:04:51.161Z,1517447091.161 [NavChartDb](INFO): Looking for Electronic Nav Chart file at: Resources/ElectronicNavigationCharts/US5CA50M.000
2018-02-01T01:04:51.161Z,1517447091.161 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA50M.000
2018-02-01T01:04:51.162Z,1517447091.162 [NavChartDb](INFO): Looking for Electronic Nav Chart file at: Resources/ElectronicNavigationCharts/US5CA61M.000
2018-02-01T01:04:51.162Z,1517447091.162 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA61M.000
2018-02-01T01:04:51.162Z,1517447091.162 [NavChartDb](INFO): Looking for Electronic Nav Chart file at: Resources/ElectronicNavigationCharts/US5CA62M.000
2018-02-01T01:04:51.162Z,1517447091.162 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA62M.000
2018-02-01T01:04:51.162Z,1517447091.162 [NavChartDb](INFO): Looking for Electronic Nav Chart file at: Resources/ElectronicNavigationCharts/US5CA83M.000
2018-02-01T01:04:51.163Z,1517447091.163 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA83M.000
2018-02-01T01:04:51.164Z,1517447091.164 [DeadReckonUsingSpeedCalculator](DEBUG): Initializing DeadReckonUsingSpeedCalculator component.
2018-02-01T01:04:51.197Z,1517447091.197 [DeadReckonUsingSpeedCalculator](INFO): Will consider orientation measurement stale after 120s.
2018-02-01T01:04:51.198Z,1517447091.198 [DeadReckonUsingSpeedCalculator](INFO): Will consider velocity measurement stale after 20s.
2018-02-01T01:04:51.198Z,1517447091.198 [DeadReckonWithRespectToSeafloor](DEBUG): Initializing DeadReckonWithRespectToSeafloor component.
2018-02-01T01:04:51.199Z,1517447091.199 [DeadReckonWithRespectToSeafloor](INFO): Will consider orientation measurement stale after 120s.
2018-02-01T01:04:51.199Z,1517447091.199 [DeadReckonWithRespectToSeafloor](INFO): Will consider velocity measurement stale after 20s.
2018-02-01T01:04:51.199Z,1517447091.199 [NavChart](DEBUG): Initialize NavChart Navigation.
2018-02-01T01:04:51.200Z,1517447091.200 [UniversalFixResidualReporter](DEBUG): Initializing UniversalFixResidualReporter component.
2018-02-01T01:04:51.214Z,1517447091.214 [MissionManager](INFO): Loading Mission: Missions/Startup.xml
2018-02-01T01:04:51.323Z,1517447091.323 [Startup:A.GoToSurface](DEBUG): Construct GoToSurface.
2018-02-01T01:04:51.344Z,1517447091.344 [MissionManager](DEBUG): 
<?xml version="1.0" encoding="UTF-8"?>
<Mission xmlns="Tethys"
       xmlns:Control="Tethys/Control"
       xmlns:Guidance="Tethys/Guidance" 
       xmlns:Units="Tethys/Units"
       xmlns:Universal="Tethys/Universal"
       xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
       xsi:schemaLocation="Tethys http://okeanids.mbari.org/tethys/Xml/Tethys.xsd
                           Tethys/Control http://okeanids.mbari.org/tethys/Xml/Control.xsd
                           Tethys/Guidance http://okeanids.mbari.org/tethys/Xml/Guidance.xsd
                           Tethys/Units http://okeanids.mbari.org/tethys/Xml/Units.xsd
                           Tethys/Universal http://okeanids.mbari.org/tethys/Xml/Universal.xsd"
       Id="Startup">

    <Guidance:GoToSurface>
        <Progression/>
    </Guidance:GoToSurface>

    <Aggregate Id="StartupSatComms">

        <Sequence/>

        <ReadDatum>
            <Timeout Duration="P1M" />
            <Universal:latitude_fix/>
        </ReadDatum>

        <ReadDatum>
            <Timeout Duration="P1M" />
            <Universal:platform_communications/>
        </ReadDatum>

    </Aggregate>

</Mission>


2018-02-01T01:04:51.345Z,1517447091.345 [MissionManager](INFO): Loading Mission: Missions/Default.xml
2018-02-01T01:04:51.474Z,1517447091.474 [MissionManager](INFO): DefineArg Default.ElapsedSinceDefaultStarted = 0.000000 min
2018-02-01T01:04:51.475Z,1517447091.475 [Default:A.Wait](DEBUG): Construct Wait.
2018-02-01T01:04:51.494Z,1517447091.494 [Default:B.GoToSurface](DEBUG): Construct GoToSurface.
2018-02-01T01:04:51.535Z,1517447091.535 [Default:CheckIn:Read_Iridium:A_Timeout:A.Execute](DEBUG): Construct Execute.
2018-02-01T01:04:51.538Z,1517447091.538 [Default:CheckIn:C.Wait](DEBUG): Construct Wait.
2018-02-01T01:04:51.567Z,1517447091.567 [Default:E.Execute](DEBUG): Construct Execute.
2018-02-01T01:04:51.599Z,1517447091.599 [CTD_Seabird](INFO): LCM OK
2018-02-01T01:04:51.600Z,1517447091.600 [CTD_Seabird](INFO): Powering up
2018-02-01T01:04:51.607Z,1517447091.607 [MissionManager](DEBUG): 
<?xml version="1.0" encoding="UTF-8"?>
<Mission xmlns="Tethys"
xmlns:Guidance="Tethys/Guidance"
xmlns:Units="Tethys/Units"
xmlns:Universal="Tethys/Universal"
xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
xsi:schemaLocation="Tethys http://okeanids.mbari.org/tethys/Xml/Tethys.xsd
Tethys/Guidance http://okeanids.mbari.org/tethys/Xml/Guidance.xsd
Tethys/Units http://okeanids.mbari.org/tethys/Xml/Units.xsd
Tethys/Universal http://okeanids.mbari.org/tethys/Xml/Universal.xsd"
Id="Default">

    <DefineArg Name="ElapsedSinceDefaultStarted"><Units:minute/><Value>0</Value></DefineArg>

    <Guidance:Wait>
        <Sequence/>
        <Description>
            Wait a moment to see if the scheduler starts a new mission before
            starting to actually run Default.
        </Description>
        <Setting><Guidance:Wait.duration/><Units:second/><Value>13</Value></Setting>
    </Guidance:Wait>

    <Guidance:GoToSurface>
        <Progression/>
    </Guidance:GoToSurface>

    <Aggregate Id="CheckIn">

        <Sequence Repeat="288"/>

        <ReadDatum Id="Read_GPS">
            <Sequence/>
            <Timeout Duration="P5M"/>
            <Universal:time_fix/>
        </ReadDatum>

        <ReadDatum Id="Read_Iridium">
            <Sequence/>
            <Timeout Duration="P2H">
                <Guidance:Execute>
                    <Sequence/>
                    <Setting><Guidance:Execute.command/><String>Burn 300</String></Setting>
                </Guidance:Execute>
                <Syslog Severity="Critical">Dropped weight due to communications timeout.</Syslog>
            </Timeout>
            <Universal:platform_communications/>
        </ReadDatum>

        <Guidance:Wait>
            <Sequence/>
            <Setting><Guidance:Wait.duration/><Units:minute/><Value>5</Value></Setting>
        </Guidance:Wait>

        <Assign><Sequence/><Arg Name="ElapsedSinceDefaultStarted"/><Elapsed><Universal:mission_started/></Elapsed></Assign>

        <Syslog Severity="Important">Default mission has been running for <Arg Name="ElapsedSinceDefaultStarted"/><Units:minute/></Syslog>

    </Aggregate>

    <Syslog Severity="Important">Restarting logs and Default mission.</Syslog>

    <Guidance:Execute>
        <Sequence/>
        <Setting><Guidance:Execute.command/><String>restart logs</String></Setting>
    </Guidance:Execute>

</Mission>


2018-02-01T01:04:51.613Z,1517447091.613 [controlThread](DEBUG): Component order: CycleStarter,DataOverHttps,Depth_Keller,DropWeight,NAL9602,Onboard,PNI_TCM,Aanderaa_O2,CANONSampler,PAR_Licor,Depth_Keller,PAR_Licor,DepthRateCalculator,PitchRateCalculator,SpeedCalculator,TempGradientCalculator,VerticalTemperatureHomogeneityIndexCalculator,YawRateCalculator,StratificationFrontDetector,DeadReckonUsingSpeedCalculator,DeadReckonWithRespectToSeafloor,NavChart,UniversalFixResidualReporter,MissionManager,VerticalControl,HorizontalControl,SpeedControl,LoopControl,BuoyancyServo,ElevatorServo,MassServo,RudderServo,ThrusterServo,SBIT,IBIT,CBIT,Reporter,LogSplitter,
2018-02-01T01:04:51.625Z,1517447091.625 [DataOverHttps](DEBUG): dashIP=134.89.2.23 starts with a digit so assuming it is a numeric IP
2018-02-01T01:04:51.635Z,1517447091.635 [Depth_Keller](ERROR): Pressure reading out of range: 1831.023193 decibar
2018-02-01T01:04:51.763Z,1517447091.763 [CANONSampler](INFO): Powering down
2018-02-01T01:04:52.019Z,1517447092.019 [DepthRateCalculator](ERROR): Depth measurement is not active
2018-02-01T01:04:52.218Z,1517447092.218 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2018-02-01T01:04:52.319Z,1517447092.319 [DeadReckonWithRespectToSeafloor](DEBUG): Starting up and don't have orientation data yet.
2018-02-01T01:04:52.433Z,1517447092.433 [BuoyancyServo](DEBUG): Initializing EZServoServo.
2018-02-01T01:04:52.441Z,1517447092.441 [BuoyancyServo](DEBUG): Initializing BuoyancyServo.
2018-02-01T01:04:52.447Z,1517447092.447 [ElevatorServo](DEBUG): Initializing EZServoServo.
2018-02-01T01:04:52.453Z,1517447092.453 [ElevatorServo](DEBUG): Initializing ElevatorServo.
2018-02-01T01:04:52.459Z,1517447092.459 [MassServo](DEBUG): Initializing EZServoServo.
2018-02-01T01:04:52.465Z,1517447092.465 [MassServo](DEBUG): Initializing MassServo.
2018-02-01T01:04:52.487Z,1517447092.487 [RudderServo](DEBUG): Initializing EZServoServo.
2018-02-01T01:04:52.493Z,1517447092.493 [RudderServo](DEBUG): Initializing RudderServo.
2018-02-01T01:04:52.498Z,1517447092.498 [ThrusterServo](DEBUG): Initializing EZServoServo.
2018-02-01T01:04:52.505Z,1517447092.505 [ThrusterServo](DEBUG): Initializing ThrusterServo.
2018-02-01T01:04:52.826Z,1517447092.826 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2018-02-01T01:04:52.827Z,1517447092.827 [DeadReckonWithRespectToSeafloor](DEBUG): Starting up and don't have orientation data yet.
2018-02-01T01:04:56.317Z,1517447096.317 [CTD_Seabird](INFO): Stopping potential previous instance(s) of CTD_Seabird LCM interface
2018-02-01T01:04:56.444Z,1517447096.444 [CTD_Seabird](INFO): Started Seabird LCM interface with command:nohup ./lrauv-framework/onboard/bin/gpctd -ldir /mnt/mmc/LRAUV/Logs/latest/ -dev /dev/ttyC6 -b 9600 >& /dev/null &
2018-02-01T01:04:56.613Z,1517447096.613 [CTD_Seabird](INFO): LCM subscribed to channel:ctd_t.seabird-gpctd
2018-02-01T01:04:57.140Z,1517447097.140 [CTD_Seabird](INFO): Stopping potential previous instance(s) of CTD_Seabird LCM interface
2018-02-01T01:04:57.140Z,1517447097.140 [CTD_Seabird](INFO): Powering down
2018-02-01T01:05:02.068Z,1517447102.068 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2018-02-01T01:05:02.077Z,1517447102.077 [DeadReckonWithRespectToSeafloor](DEBUG): Starting up and don't have orientation data yet.
2018-02-01T01:05:02.464Z,1517447102.464 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2018-02-01T01:05:02.473Z,1517447102.473 [DeadReckonWithRespectToSeafloor](DEBUG): Starting up and don't have orientation data yet.
2018-02-01T01:05:02.941Z,1517447102.941 [Aanderaa_O2](INFO): Powering down
2018-02-01T01:05:03.049Z,1517447103.049 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2018-02-01T01:05:03.050Z,1517447103.050 [DeadReckonWithRespectToSeafloor](DEBUG): Starting up and don't have orientation data yet.
2018-02-01T01:05:03.189Z,1517447103.189 [DataOverHttps](INFO): setting available, lastComms_.elapsed()=0.003587
2018-02-01T01:05:03.220Z,1517447103.220 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2018-02-01T01:05:03.237Z,1517447103.237 [DeadReckonWithRespectToSeafloor](DEBUG): Starting up and don't have orientation data yet.
2018-02-01T01:05:03.636Z,1517447103.636 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2018-02-01T01:05:03.637Z,1517447103.637 [DeadReckonWithRespectToSeafloor](DEBUG): Starting up and don't have orientation data yet.
2018-02-01T01:05:04.045Z,1517447104.045 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2018-02-01T01:05:04.046Z,1517447104.046 [DeadReckonWithRespectToSeafloor](DEBUG): Starting up and don't have orientation data yet.
2018-02-01T01:05:14.468Z,1517447114.468 [SBIT](IMPORTANT): Beginning Startup BIT
2018-02-01T01:05:14.509Z,1517447114.509 [CBIT](IMPORTANT): Beginning ground fault scan
2018-02-01T01:05:19.903Z,1517447119.903 [NAL9602](INFO): Powering up NAL9602
2018-02-01T01:05:25.566Z,1517447125.566 [CBIT](IMPORTANT): No ground fault detected
mA:
CHAN A0 (Batt): -0.002597
CHAN A1 (24V): -0.006319
CHAN A2 (12V): -0.001976
CHAN A3 (5V): -0.000821
CHAN B0 (3.3V): -0.000514
CHAN B1 (3.15aV): 0.000895
CHAN B2 (3.15bV): 0.000193
CHAN B3 (GND): -0.000224
OPEN: -0.000691
Full Scale Calc: 4.765 mA, -1.589 mA
2018-02-01T01:05:30.906Z,1517447130.906 [NAL9602](INFO): NAL9602 initialized
2018-02-01T01:06:07.932Z,1517447167.932 [SBIT](FAULT): Mass: EXPECTED:-0.000750 ACTUAL:-0.001051
2018-02-01T01:06:07.932Z,1517447167.932 [SBIT](FAULT): Control surface position failure.
2018-02-01T01:06:08.314Z,1517447168.314 [SBIT](CRITICAL): SBIT FAILED
2018-02-01T01:06:08.316Z,1517447168.316 [CommandLine](FAULT): Scheduling is paused
2018-02-01T01:06:08.316Z,1517447168.316 [CBIT](INFO): Critical error at 20180201T010608
2018-02-01T01:06:08.316Z,1517447168.316 [Supervisor](INFO): Stop Mission called by CBIT::checkCriticals
2018-02-01T01:06:08.669Z,1517447168.669 [MissionManager](IMPORTANT): Started mission Startup
2018-02-01T01:06:08.669Z,1517447168.669 [Startup] Running Loop=1
2018-02-01T01:06:08.670Z,1517447168.670 [Startup](DEBUG): Aggregate::initialize Startup
2018-02-01T01:06:08.670Z,1517447168.670 [Startup:A.GoToSurface] Running Loop=1
2018-02-01T01:06:08.670Z,1517447168.670 [Startup:A.GoToSurface](DEBUG): Initialize GoToSurfaceComponent.
2018-02-01T01:06:08.670Z,1517447168.670 [Startup:A.GoToSurface](DEBUG): No depth rate setting specified. Using default value of nan m/s.
2018-02-01T01:06:08.671Z,1517447168.671 [Startup:A.GoToSurface](DEBUG): No pitch setting specified. Using default value of nan degrees.
2018-02-01T01:06:08.671Z,1517447168.671 [Startup:A.GoToSurface](DEBUG): No speed setting specified. Using default value of 1.000000 m/s.
2018-02-01T01:06:08.672Z,1517447168.672 [Startup:A.GoToSurface](DEBUG): No pitch timeout specified. Using default value of 20.000000 seconds.
2018-02-01T01:06:08.672Z,1517447168.672 [Startup:A.GoToSurface](DEBUG): No surface timeout specified. Using default value of 1000.000000 seconds.
2018-02-01T01:06:08.678Z,1517447168.678 [Startup:StartupSatComms] Running Loop=1
2018-02-01T01:06:08.678Z,1517447168.678 [Startup:StartupSatComms](DEBUG): Aggregate::initialize Startup:StartupSatComms
2018-02-01T01:06:08.678Z,1517447168.678 [Startup:StartupSatComms:A] Running Loop=1
2018-02-01T01:06:09.067Z,1517447169.067 [Startup:StartupSatComms:A](DEBUG): Initialize ReadDataComponent to sense latitude_fix
2018-02-01T01:07:09.012Z,1517447229.012 [Startup:StartupSatComms:A](INFO): Timed out from 2018-02-01T01:06:08.7Z
2018-02-01T01:07:09.012Z,1517447229.012 [Startup:StartupSatComms:A] Stopped
2018-02-01T01:07:09.012Z,1517447229.012 [Startup:StartupSatComms:B] Running Loop=1
2018-02-01T01:07:09.409Z,1517447229.409 [Startup:StartupSatComms:B](DEBUG): Initialize ReadDataComponent to sense platform_communications
2018-02-01T01:07:16.574Z,1517447236.574 [DataOverHttps](INFO): Sending 25 bytes from file Logs/20180125T182614/Courier0036.lzma
2018-02-01T01:07:17.357Z,1517447237.357 [DataOverHttps](INFO): Moved sent file to Logs/20180125T182614/Courier0036.lzma.bak
2018-02-01T01:07:17.358Z,1517447237.358 [DataOverHttps](INFO): SBD MOMSN=7772695
2018-02-01T01:07:26.144Z,1517447246.144 [DataOverHttps](INFO): Sending 72 bytes from file Logs/20180201T010443/Courier0000.lzma
2018-02-01T01:07:26.937Z,1517447246.937 [DataOverHttps](INFO): Moved sent file to Logs/20180201T010443/Courier0000.lzma.bak
2018-02-01T01:07:26.938Z,1517447246.938 [DataOverHttps](INFO): SBD MOMSN=7772697
2018-02-01T01:07:35.723Z,1517447255.723 [DataOverHttps](INFO): Sending 87 bytes from file Logs/20180125T182614/Express0037.lzma
2018-02-01T01:07:36.513Z,1517447256.513 [DataOverHttps](INFO): Moved sent file to Logs/20180125T182614/Express0037.lzma.bak
2018-02-01T01:07:36.514Z,1517447256.514 [DataOverHttps](INFO): SBD MOMSN=7772701
2018-02-01T01:07:45.231Z,1517447265.231 [DataOverHttps](INFO): Sending 616 bytes from file Logs/20180201T010443/Express0001.lzma
2018-02-01T01:07:46.029Z,1517447266.029 [DataOverHttps](INFO): Moved sent file to Logs/20180201T010443/Express0001.lzma.bak
2018-02-01T01:07:46.029Z,1517447266.029 [DataOverHttps](INFO): SBD MOMSN=7772704
2018-02-01T01:07:46.568Z,1517447266.568 [Startup:StartupSatComms:B] Stopped
2018-02-01T01:07:46.573Z,1517447266.573 [Startup:StartupSatComms](INFO): Completed Startup:StartupSatComms
2018-02-01T01:07:46.573Z,1517447266.573 [Startup:StartupSatComms] Stopped
2018-02-01T01:07:46.573Z,1517447266.573 [Startup:StartupSatComms](DEBUG): Aggregate::uninitialize Startup:StartupSatComms
2018-02-01T01:07:46.574Z,1517447266.574 [Startup](INFO): Completed Startup
2018-02-01T01:07:46.574Z,1517447266.574 [MissionManager](INFO): Startup is completed.
2018-02-01T01:07:46.574Z,1517447266.574 [MissionManager](INFO): Uninitializing Mission Startup
2018-02-01T01:07:46.574Z,1517447266.574 [Startup] Stopped
2018-02-01T01:07:46.574Z,1517447266.574 [Startup](DEBUG): Aggregate::uninitialize Startup
2018-02-01T01:07:46.574Z,1517447266.574 [Startup:A.GoToSurface] Stopped
2018-02-01T01:07:46.574Z,1517447266.574 [Startup:A.GoToSurface](DEBUG): Uninitialize GoToSurfaceComponent.
2018-02-01T01:07:46.901Z,1517447266.901 [MissionManager](IMPORTANT): Started mission Default
2018-02-01T01:07:46.901Z,1517447266.901 [Default] Running Loop=1
2018-02-01T01:07:46.901Z,1517447266.901 [Default](DEBUG): Aggregate::initialize Default
2018-02-01T01:07:46.901Z,1517447266.901 [Default:B.GoToSurface] Running Loop=1
2018-02-01T01:07:46.901Z,1517447266.901 [Default:B.GoToSurface](DEBUG): Initialize GoToSurfaceComponent.
2018-02-01T01:07:46.902Z,1517447266.902 [Default:B.GoToSurface](DEBUG): No depth rate setting specified. Using default value of nan m/s.
2018-02-01T01:07:46.902Z,1517447266.902 [Default:B.GoToSurface](DEBUG): No pitch setting specified. Using default value of nan degrees.
2018-02-01T01:07:46.902Z,1517447266.902 [Default:B.GoToSurface](DEBUG): No speed setting specified. Using default value of 1.000000 m/s.
2018-02-01T01:07:46.903Z,1517447266.903 [Default:B.GoToSurface](DEBUG): No pitch timeout specified. Using default value of 20.000000 seconds.
2018-02-01T01:07:46.903Z,1517447266.903 [Default:B.GoToSurface](DEBUG): No surface timeout specified. Using default value of 1000.000000 seconds.
2018-02-01T01:07:46.903Z,1517447266.903 [Default:A.Wait] Running Loop=1
2018-02-01T01:07:46.903Z,1517447266.903 [Default:A.Wait](DEBUG): Initialize Wait Component.
2018-02-01T01:07:51.264Z,1517447271.264 [DeadReckonUsingSpeedCalculator](ERROR): Will not write estimated position: latitudeAccuracy_ = nan, longitudeAccuracy_ = nan, depthAccuracy_ = nan
2018-02-01T01:07:51.264Z,1517447271.264 [DeadReckonUsingSpeedCalculator] Software Fault, FailCount= 1
2018-02-01T01:07:51.264Z,1517447271.264 [DeadReckonUsingSpeedCalculator](ERROR): Software Fault
2018-02-01T01:07:51.274Z,1517447271.274 [DeadReckonWithRespectToSeafloor](ERROR): Will not write estimated position: latitudeAccuracy_ = nan, longitudeAccuracy_ = nan, depthAccuracy_ = nan
2018-02-01T01:07:51.274Z,1517447271.274 [DeadReckonWithRespectToSeafloor] Software Fault, FailCount= 1
2018-02-01T01:07:51.274Z,1517447271.274 [DeadReckonWithRespectToSeafloor](ERROR): Software Fault
2018-02-01T01:07:51.308Z,1517447271.308 [CBIT](ERROR): Software Fault in component: DeadReckonUsingSpeedCalculator
2018-02-01T01:07:51.308Z,1517447271.308 [CBIT](ERROR): Software Fault in component: DeadReckonWithRespectToSeafloor
2018-02-01T01:07:51.669Z,1517447271.669 [CBIT](INFO): Clearing failed state for component DeadReckonUsingSpeedCalculator
2018-02-01T01:07:51.669Z,1517447271.669 [DeadReckonUsingSpeedCalculator] No Fault, FailCount= 1
2018-02-01T01:07:51.670Z,1517447271.670 [CBIT](INFO): Clearing failed state for component DeadReckonWithRespectToSeafloor
2018-02-01T01:07:51.670Z,1517447271.670 [DeadReckonWithRespectToSeafloor] No Fault, FailCount= 1
2018-02-01T01:07:52.061Z,1517447272.061 [DeadReckonUsingSpeedCalculator](DEBUG): Initializing DeadReckonUsingSpeedCalculator component.
2018-02-01T01:07:52.062Z,1517447272.062 [DeadReckonUsingSpeedCalculator](INFO): Will consider orientation measurement stale after 120s.
2018-02-01T01:07:52.062Z,1517447272.062 [DeadReckonUsingSpeedCalculator](INFO): Will consider velocity measurement stale after 20s.
2018-02-01T01:07:52.063Z,1517447272.063 [DeadReckonWithRespectToSeafloor](DEBUG): Initializing DeadReckonWithRespectToSeafloor component.
2018-02-01T01:07:52.063Z,1517447272.063 [DeadReckonWithRespectToSeafloor](INFO): Will consider orientation measurement stale after 120s.
2018-02-01T01:07:52.064Z,1517447272.064 [DeadReckonWithRespectToSeafloor](INFO): Will consider velocity measurement stale after 20s.
2018-02-01T01:08:00.057Z,1517447280.057 [Default:A.Wait](INFO): Done Waiting.
2018-02-01T01:08:00.058Z,1517447280.058 [Default:A.Wait] Stopped
2018-02-01T01:08:00.058Z,1517447280.058 [Default:A.Wait](DEBUG): Uninitialize Wait Component.
2018-02-01T01:08:00.459Z,1517447280.459 [Default:CheckIn] Running Loop=1
2018-02-01T01:08:00.459Z,1517447280.459 [Default:CheckIn](DEBUG): Aggregate::initialize Default:CheckIn
2018-02-01T01:08:00.459Z,1517447280.459 [Default:CheckIn:Read_GPS] Running Loop=1
2018-02-01T01:08:00.856Z,1517447280.856 [Default:CheckIn:Read_GPS](DEBUG): Initialize ReadDataComponent to sense time_fix
2018-02-01T01:10:12.494Z,1517447412.494 [CommandLine](IMPORTANT): got command restart application
2018-02-01T01:10:13.505Z,1517447413.505 [CommandLine ThreadHandler](INFO): Uninitializing protected caller thread.
2018-02-01T01:10:13.506Z,1517447413.506 [CommandLine ThreadHandler](INFO): Thread cancelled.
2018-02-01T01:10:13.541Z,1517447413.541 [Supervisor](DEBUG): Uninitializing supervisor and starting cleanup.  Bye!
2018-02-01T01:10:13.541Z,1517447413.541 [CommandLine ThreadHandler](INFO): Thread cancelled.
2018-02-01T01:10:13.542Z,1517447413.542 [CommandLine](INFO): Join timeout helper Thread ID is 1112
2018-02-01T01:10:13.542Z,1517447413.542 [ComponentRegistry](INFO): Shutting down NavChartDb ThreadHandler
2018-02-01T01:10:13.543Z,1517447413.543 [NavChartDb ThreadHandler](INFO): Thread cancelled.
2018-02-01T01:10:13.543Z,1517447413.543 [NavChartDb](INFO): Join timeout helper Thread ID is 1113
2018-02-01T01:10:13.601Z,1517447413.601 [NavChartDb ThreadHandler](INFO): Uninitializing protected caller thread.
2018-02-01T01:10:13.601Z,1517447413.601 [NavChartDb ThreadHandler](INFO): Thread cancelled.
2018-02-01T01:10:13.610Z,1517447413.610 [ComponentRegistry](INFO): Shutting down WetLabsBB2FL ThreadHandler
2018-02-01T01:10:13.610Z,1517447413.610 [WetLabsBB2FL ThreadHandler](INFO): Thread cancelled.
2018-02-01T01:10:13.611Z,1517447413.611 [WetLabsBB2FL](INFO): Join timeout helper Thread ID is 1114
2018-02-01T01:10:13.873Z,1517447413.873 [WetLabsBB2FL ThreadHandler](INFO): Uninitializing protected caller thread.
2018-02-01T01:10:13.873Z,1517447413.873 [WetLabsBB2FL](INFO): Powering down
2018-02-01T01:10:13.874Z,1517447413.874 [WetLabsBB2FL ThreadHandler](INFO): Thread cancelled.
2018-02-01T01:10:13.889Z,1517447413.889 [ComponentRegistry](INFO): Shutting down CTD_Seabird ThreadHandler
2018-02-01T01:10:13.889Z,1517447413.889 [CTD_Seabird ThreadHandler](INFO): Thread cancelled.
2018-02-01T01:10:13.889Z,1517447413.889 [CTD_Seabird](INFO): Join timeout helper Thread ID is 1115
2018-02-01T01:10:13.993Z,1517447413.993 [CTD_Seabird ThreadHandler](INFO): Uninitializing protected caller thread.
2018-02-01T01:10:14.171Z,1517447414.171 [CTD_Seabird](INFO): Stopping potential previous instance(s) of CTD_Seabird LCM interface
2018-02-01T01:10:14.171Z,1517447414.171 [CTD_Seabird](INFO): Powering down
2018-02-01T01:10:14.172Z,1517447414.172 [CTD_Seabird ThreadHandler](INFO): Thread cancelled.
2018-02-01T01:10:14.189Z,1517447414.189 [ComponentRegistry](INFO): Shutting down CTD_NeilBrown ThreadHandler
2018-02-01T01:10:14.189Z,1517447414.189 [CTD_NeilBrown ThreadHandler](INFO): Thread cancelled.
2018-02-01T01:10:14.189Z,1517447414.189 [CTD_NeilBrown](INFO): Join timeout helper Thread ID is 1117
2018-02-01T01:10:14.349Z,1517447414.349 [CTD_NeilBrown ThreadHandler](INFO): Uninitializing protected caller thread.
2018-02-01T01:10:14.349Z,1517447414.349 [CTD_NeilBrown](INFO): Powering down
2018-02-01T01:10:14.350Z,1517447414.350 [CTD_NeilBrown ThreadHandler](INFO): Thread cancelled.
2018-02-01T01:10:14.370Z,1517447414.370 [ComponentRegistry](INFO): Shutting down Radio_Surface ThreadHandler
2018-02-01T01:10:14.370Z,1517447414.370 [Radio_Surface ThreadHandler](INFO): Thread cancelled.
2018-02-01T01:10:14.370Z,1517447414.370 [Radio_Surface](INFO): Join timeout helper Thread ID is 1118
2018-02-01T01:10:14.377Z,1517447414.377 [Radio_Surface ThreadHandler](INFO): Uninitializing protected caller thread.
2018-02-01T01:10:14.377Z,1517447414.377 [Radio_Surface ThreadHandler](INFO): Thread cancelled.
2018-02-01T01:10:14.395Z,1517447414.395 [ComponentRegistry](INFO): Shutting down logger ThreadHandler
2018-02-01T01:10:14.395Z,1517447414.395 [logger ThreadHandler](INFO): Thread cancelled.
2018-02-01T01:10:14.395Z,1517447414.395 [logger](INFO): Join timeout helper Thread ID is 1119
2018-02-01T01:10:14.446Z,1517447414.446 [logger ThreadHandler](INFO): Uninitializing protected caller thread.
2018-02-01T01:10:14.447Z,1517447414.447 [logger ThreadHandler](INFO): Thread cancelled.
2018-02-01T01:10:14.462Z,1517447414.462 [ComponentRegistry](INFO): Shutting down CommandLine ThreadHandler
2018-02-01T01:10:14.462Z,1517447414.462 [CommandLine ThreadHandler](INFO): Thread cancelled.
2018-02-01T01:10:14.462Z,1517447414.462 [ComponentRegistry](INFO): Shutting down controlThread ThreadHandler
2018-02-01T01:10:14.462Z,1517447414.462 [controlThread ThreadHandler](INFO): Thread cancelled.
2018-02-01T01:10:14.463Z,1517447414.463 [controlThread](INFO): Join timeout helper Thread ID is 1120
2018-02-01T01:10:14.777Z,1517447414.777 [controlThread ThreadHandler](INFO): Uninitializing protected caller thread.
2018-02-01T01:10:14.777Z,1517447414.777 [controlThread](DEBUG): Uninitializing ControlThread
2018-02-01T01:10:14.778Z,1517447414.778 [NAL9602](INFO): Powering down
2018-02-01T01:10:14.779Z,1517447414.779 [PNI_TCM](INFO): Powering down
2018-02-01T01:10:14.865Z,1517447414.865 [Aanderaa_O2](INFO): Powering down
2018-02-01T01:10:14.867Z,1517447414.867 [DepthRateCalculator](DEBUG): Initializing DepthRateCalculator.
2018-02-01T01:10:14.869Z,1517447414.869 [NavChart](DEBUG): Uninitialize NavChart Navigation.
2018-02-01T01:10:14.869Z,1517447414.869 [MissionManager](INFO): Uninitializing Mission Default
2018-02-01T01:10:14.870Z,1517447414.870 [Default] Stopped
2018-02-01T01:10:14.870Z,1517447414.870 [Default](DEBUG): Aggregate::uninitialize Default
2018-02-01T01:10:14.870Z,1517447414.870 [Default:B.GoToSurface] Stopped
2018-02-01T01:10:14.870Z,1517447414.870 [Default:B.GoToSurface](DEBUG): Uninitialize GoToSurfaceComponent.
2018-02-01T01:10:14.870Z,1517447414.870 [Default:CheckIn] Stopped
2018-02-01T01:10:14.870Z,1517447414.870 [Default:CheckIn](DEBUG): Aggregate::uninitialize Default:CheckIn
2018-02-01T01:10:14.870Z,1517447414.870 [Default:CheckIn:Read_GPS] Stopped
2018-02-01T01:10:14.872Z,1517447414.872 [VerticalControl](DEBUG): Uninitialize VerticalControlComponent.
2018-02-01T01:10:14.873Z,1517447414.873 [HorizontalControl](DEBUG): Uninitialize HorizontalControlComponent.
2018-02-01T01:10:14.873Z,1517447414.873 [SpeedControl](DEBUG): Uninitialize SpeedControlComponent.
2018-02-01T01:10:14.873Z,1517447414.873 [LoopControl](DEBUG): Uninitialize LoopControlComponent.
2018-02-01T01:10:14.874Z,1517447414.874 [BuoyancyServo](DEBUG): Uninitialize Buoyancy Servo.
2018-02-01T01:10:14.874Z,1517447414.874 [BuoyancyServo](INFO): Powering down
2018-02-01T01:10:14.889Z,1517447414.889 [ElevatorServo](DEBUG): Uninitialize Elevator Servo.
2018-02-01T01:10:14.889Z,1517447414.889 [ElevatorServo](INFO): Powering down
2018-02-01T01:10:14.890Z,1517447414.890 [MassServo](DEBUG): Uninitialize Mass Servo.
2018-02-01T01:10:14.890Z,1517447414.890 [MassServo](INFO): Powering down
2018-02-01T01:10:14.891Z,1517447414.891 [RudderServo](DEBUG): Uninitialize Rudder Servo.
2018-02-01T01:10:14.891Z,1517447414.891 [RudderServo](INFO): Powering down
2018-02-01T01:10:14.892Z,1517447414.892 [ThrusterServo](DEBUG): Uninitialize Thruster Servo.
2018-02-01T01:10:14.892Z,1517447414.892 [ThrusterServo](INFO): Powering down
2018-02-01T01:10:14.892Z,1517447414.892 [SBIT](DEBUG): Uninitialize SBIT Component.
2018-02-01T01:10:14.893Z,1517447414.893 [IBIT](DEBUG): Uninitialize IBIT Component.
2018-02-01T01:10:14.893Z,1517447414.893 [CBIT](DEBUG): Uninitialize CBIT Component.
2018-02-01T01:10:14.894Z,1517447414.894 [controlThread ThreadHandler](INFO): Thread cancelled.
2018-02-01T01:10:14.951Z,1517447414.951 [Radio_Surface ThreadHandler](INFO): Thread cancelled.
2018-02-01T01:10:14.986Z,1517447414.986 [WetLabsBB2FL ThreadHandler](INFO): Thread cancelled.
2018-02-01T01:10:14.989Z,1517447414.989 [CTD_Seabird ThreadHandler](INFO): Thread cancelled.
2018-02-01T01:10:14.992Z,1517447414.992 [CTD_NeilBrown ThreadHandler](INFO): Thread cancelled.
2018-02-01T01:10:15.019Z,1517447415.019 [NavChartDb ThreadHandler](INFO): Thread cancelled.
2018-02-01T01:10:15.069Z,1517447415.069 [logger ThreadHandler](INFO): Thread cancelled.