2017-04-26T16:39:41.944Z,1493224781.944 [Supervisor](DEBUG): Initializing supervisor.
2017-04-26T16:39:41.947Z,1493224781.947 [SyncHandler](DEBUG): Created PCaller Thread at 4051A4E0
2017-04-26T16:39:41.948Z,1493224781.948 [SyncHandler](INFO): Protected caller Thread ID is 769
2017-04-26T16:39:41.948Z,1493224781.948 [ComponentRegistry](DEBUG): Component "controlThread" handled in its own thread.
2017-04-26T16:39:41.951Z,1493224781.951 [controlThread ThreadHandler](DEBUG): Created PCaller Thread at 4054A4E0
2017-04-26T16:39:41.951Z,1493224781.951 [controlThread ThreadHandler](INFO): Protected caller Thread ID is 770
2017-04-26T16:39:41.954Z,1493224781.954 [ComponentRegistry](DEBUG): SyncComponent "CycleStarter" handled in the control thread.
2017-04-26T16:39:41.967Z,1493224781.967 [ComponentRegistry](DEBUG): Component "CommandLine" handled in its own thread.
2017-04-26T16:39:41.971Z,1493224781.971 [CommandLine ThreadHandler](DEBUG): Created PCaller Thread at 4057A4E0
2017-04-26T16:39:41.971Z,1493224781.971 [CommandLine ThreadHandler](INFO): Protected caller Thread ID is 771
2017-04-26T16:39:41.972Z,1493224781.972 [ComponentRegistry](DEBUG): Component "logger" handled in its own thread.
2017-04-26T16:39:41.975Z,1493224781.975 [logger ThreadHandler](DEBUG): Created PCaller Thread at 405AA4E0
2017-04-26T16:39:41.975Z,1493224781.976 [logger ThreadHandler](INFO): Protected caller Thread ID is 772
2017-04-26T16:39:41.978Z,1493224781.978 [ComponentRegistry](DEBUG): SyncComponent "LogSplitter" handled in the control thread.
2017-04-26T16:39:41.978Z,1493224781.978 [Supervisor](INFO): Looking for Config files in directory: Config/
2017-04-26T16:39:41.982Z,1493224781.982 [Supervisor](INFO): Opening Config file at: Config/Guidance.cfg
2017-04-26T16:39:42.076Z,1493224782.076 [Supervisor](INFO): Opening Config file at: Config/Control.cfg
2017-04-26T16:39:42.440Z,1493224782.440 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Control
2017-04-26T16:39:42.441Z,1493224782.441 [Supervisor](INFO): Opening Config file at: Config/Derivation.cfg
2017-04-26T16:39:42.587Z,1493224782.587 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Derivation
2017-04-26T16:39:42.588Z,1493224782.588 [Supervisor](INFO): Opening Config file at: Config/Navigation.cfg
2017-04-26T16:39:42.811Z,1493224782.810 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Navigation
2017-04-26T16:39:42.811Z,1493224782.811 [Supervisor](INFO): Opening Config file at: Config/secure.cfg
2017-04-26T16:39:42.924Z,1493224782.924 [ComponentRegistry](DEBUG): Loaded Config Component "Config/secure
2017-04-26T16:39:42.924Z,1493224782.924 [Supervisor](INFO): Opening Config file at: Config/BIT.cfg
2017-04-26T16:39:43.144Z,1493224783.144 [ComponentRegistry](DEBUG): Loaded Config Component "Config/BIT
2017-04-26T16:39:43.146Z,1493224783.146 [Supervisor](INFO): Opening Config file at: Config/Simulator.cfg
2017-04-26T16:39:43.672Z,1493224783.672 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Simulator
2017-04-26T16:39:43.673Z,1493224783.673 [Supervisor](INFO): Opening Config file at: Config/Science.cfg
2017-04-26T16:39:43.990Z,1493224783.990 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Science
2017-04-26T16:39:43.991Z,1493224783.991 [Supervisor](INFO): Opening Config file at: Config/Sample.cfg
2017-04-26T16:39:44.106Z,1493224784.106 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Sample
2017-04-26T16:39:44.107Z,1493224784.107 [Supervisor](INFO): Opening Config file at: Config/Estimation.cfg
2017-04-26T16:39:49.564Z,1493224789.564 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Estimation
2017-04-26T16:39:49.565Z,1493224789.565 [Supervisor](INFO): Opening Config file at: Config/logger.cfg
2017-04-26T16:39:51.044Z,1493224791.044 [ComponentRegistry](DEBUG): Loaded Config Component "Config/logger
2017-04-26T16:39:51.045Z,1493224791.045 [Supervisor](INFO): Opening Config file at: Config/vehicle.cfg
2017-04-26T16:39:51.532Z,1493224791.532 [ComponentRegistry](DEBUG): Loaded Config Component "Config/vehicle
2017-04-26T16:39:51.533Z,1493224791.533 [Supervisor](INFO): Opening Config file at: Config/Sensor.cfg
2017-04-26T16:39:51.938Z,1493224791.938 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Sensor
2017-04-26T16:39:51.939Z,1493224791.939 [Supervisor](INFO): Opening Config file at: Config/Servo.cfg
2017-04-26T16:39:52.268Z,1493224792.268 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Servo
2017-04-26T16:39:52.269Z,1493224792.269 [Supervisor](INFO): Opening Config file at: Config/workSite.cfg
2017-04-26T16:39:52.390Z,1493224792.390 [ComponentRegistry](DEBUG): Loaded Config Component "Config/workSite
2017-04-26T16:39:52.393Z,1493224792.393 [Supervisor](INFO): Looking for Config files in directory: Config/lrauv-daphne/
2017-04-26T16:39:52.397Z,1493224792.397 [Supervisor](INFO): Opening Config file at: Config/lrauv-daphne/Control.cfg
2017-04-26T16:39:52.516Z,1493224792.516 [Supervisor](INFO): Opening Config file at: Config/lrauv-daphne/Navigation.cfg
2017-04-26T16:39:52.620Z,1493224792.620 [Supervisor](INFO): Opening Config file at: Config/lrauv-daphne/secure.cfg
2017-04-26T16:39:52.719Z,1493224792.719 [Supervisor](INFO): Opening Config file at: Config/lrauv-daphne/BIT.cfg
2017-04-26T16:39:52.835Z,1493224792.835 [Supervisor](INFO): Opening Config file at: Config/lrauv-daphne/Simulator.cfg
2017-04-26T16:39:52.937Z,1493224792.937 [Supervisor](INFO): Opening Config file at: Config/lrauv-daphne/Science.cfg
2017-04-26T16:39:53.080Z,1493224793.080 [Supervisor](INFO): Opening Config file at: Config/lrauv-daphne/logger.cfg
2017-04-26T16:39:53.187Z,1493224793.187 [Supervisor](INFO): Opening Config file at: Config/lrauv-daphne/vehicle.cfg
2017-04-26T16:39:53.384Z,1493224793.384 [Supervisor](INFO): Opening Config file at: Config/lrauv-daphne/Battery.cfg
2017-04-26T16:39:53.648Z,1493224793.648 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Battery
2017-04-26T16:39:53.649Z,1493224793.648 [Supervisor](INFO): Opening Config file at: Config/lrauv-daphne/Sensor.cfg
2017-04-26T16:39:53.821Z,1493224793.821 [Supervisor](INFO): Opening Config file at: Config/lrauv-daphne/Servo.cfg
2017-04-26T16:39:53.938Z,1493224793.938 [Supervisor](INFO): Opening Config file at: Config/lrauv-daphne/workSite.cfg
2017-04-26T16:39:54.027Z,1493224794.027 [Supervisor](IMPORTANT): Reading configuration overrides from Data/persisted.cfg
2017-04-26T16:39:54.038Z,1493224794.038 [Module Loader](DEBUG): Loading Module at Modules/Control.so
2017-04-26T16:39:54.114Z,1493224794.114 [VerticalControl](DEBUG): Construct VerticalControl.
2017-04-26T16:39:54.250Z,1493224794.250 [VerticalControl] Loaded
2017-04-26T16:39:54.251Z,1493224794.251 [ComponentRegistry](DEBUG): SyncComponent "VerticalControl" handled in the control thread.
2017-04-26T16:39:54.252Z,1493224794.252 [HorizontalControl](DEBUG): Construct HorizontalControl.
2017-04-26T16:39:54.331Z,1493224794.331 [HorizontalControl] Loaded
2017-04-26T16:39:54.331Z,1493224794.331 [ComponentRegistry](DEBUG): SyncComponent "HorizontalControl" handled in the control thread.
2017-04-26T16:39:54.332Z,1493224794.332 [SpeedControl](DEBUG): Construct SpeedControl.
2017-04-26T16:39:54.338Z,1493224794.338 [SpeedControl] Loaded
2017-04-26T16:39:54.338Z,1493224794.338 [ComponentRegistry](DEBUG): SyncComponent "SpeedControl" handled in the control thread.
2017-04-26T16:39:54.339Z,1493224794.339 [LoopControl](DEBUG): Construct LoopControl.
2017-04-26T16:39:54.339Z,1493224794.339 [LoopControl] Loaded
2017-04-26T16:39:54.340Z,1493224794.340 [ComponentRegistry](DEBUG): SyncComponent "LoopControl" handled in the control thread.
2017-04-26T16:39:54.340Z,1493224794.340 [Module Loader](DEBUG): Loaded Module: Control (Contains the Control components, such as Depth, Heading, and Speed Control)
2017-04-26T16:39:54.341Z,1493224794.341 [Module Loader](DEBUG): Loading Module at Modules/BIT.so
2017-04-26T16:39:54.517Z,1493224794.517 [SBIT](DEBUG): Construct Startup Built In Test.
2017-04-26T16:39:54.533Z,1493224794.533 [SBIT] Loaded
2017-04-26T16:39:54.533Z,1493224794.533 [ComponentRegistry](DEBUG): SyncComponent "SBIT" handled in the control thread.
2017-04-26T16:39:54.534Z,1493224794.534 [IBIT](DEBUG): Construct Initiated Built In Test.
2017-04-26T16:39:54.563Z,1493224794.563 [IBIT] Loaded
2017-04-26T16:39:54.563Z,1493224794.563 [ComponentRegistry](DEBUG): SyncComponent "IBIT" handled in the control thread.
2017-04-26T16:39:54.571Z,1493224794.571 [CBIT](DEBUG): Construct Continuous Built In Test.
2017-04-26T16:39:54.755Z,1493224794.755 [CBIT] Loaded
2017-04-26T16:39:54.755Z,1493224794.755 [ComponentRegistry](DEBUG): SyncComponent "CBIT" handled in the control thread.
2017-04-26T16:39:54.756Z,1493224794.756 [Module Loader](DEBUG): Loaded Module: BIT (Contains the BuiltInTest components, such as C Built In Test)
2017-04-26T16:39:58.262Z,1493224798.261 [Module Loader](DEBUG): Loading Module at Modules/Derivation.so
2017-04-26T16:39:58.307Z,1493224798.307 [DepthRateCalculator] Loaded
2017-04-26T16:39:58.308Z,1493224798.308 [ComponentRegistry](DEBUG): SyncComponent "DepthRateCalculator" handled in the control thread.
2017-04-26T16:39:58.313Z,1493224798.313 [PitchRateCalculator] Loaded
2017-04-26T16:39:58.314Z,1493224798.314 [ComponentRegistry](DEBUG): SyncComponent "PitchRateCalculator" handled in the control thread.
2017-04-26T16:39:58.329Z,1493224798.329 [SpeedCalculator] Loaded
2017-04-26T16:39:58.330Z,1493224798.330 [ComponentRegistry](DEBUG): SyncComponent "SpeedCalculator" handled in the control thread.
2017-04-26T16:39:58.357Z,1493224798.357 [TempGradientCalculator] Loaded
2017-04-26T16:39:58.357Z,1493224798.357 [ComponentRegistry](DEBUG): SyncComponent "TempGradientCalculator" handled in the control thread.
2017-04-26T16:39:58.374Z,1493224798.374 [VerticalTemperatureHomogeneityIndexCalculator] Loaded
2017-04-26T16:39:58.374Z,1493224798.374 [ComponentRegistry](DEBUG): SyncComponent "VerticalTemperatureHomogeneityIndexCalculator" handled in the control thread.
2017-04-26T16:39:58.380Z,1493224798.380 [YawRateCalculator] Loaded
2017-04-26T16:39:58.380Z,1493224798.380 [ComponentRegistry](DEBUG): SyncComponent "YawRateCalculator" handled in the control thread.
2017-04-26T16:39:58.381Z,1493224798.381 [Module Loader](DEBUG): Loaded Module: Derivation (Contains the base derivation components)
2017-04-26T16:39:58.381Z,1493224798.381 [Module Loader](DEBUG): Loading Module at Modules/Estimation.so
2017-04-26T16:39:58.625Z,1493224798.625 [StratificationFrontDetector](INFO): threshold set to: 0.399988 degC
2017-04-26T16:39:58.625Z,1493224798.625 [StratificationFrontDetector](DEBUG): (re)initializing
2017-04-26T16:39:58.625Z,1493224798.625 [StratificationFrontDetector] Loaded
2017-04-26T16:39:58.626Z,1493224798.626 [ComponentRegistry](DEBUG): SyncComponent "StratificationFrontDetector" handled in the control thread.
2017-04-26T16:39:58.650Z,1493224798.650 [DepAvgTempFrontDetector] Loaded
2017-04-26T16:39:58.650Z,1493224798.650 [ComponentRegistry](DEBUG): SyncComponent "DepAvgTempFrontDetector" handled in the control thread.
2017-04-26T16:39:58.651Z,1493224798.651 [Module Loader](DEBUG): Loaded Module: Estimation (Contains the base estimation components)
2017-04-26T16:39:58.651Z,1493224798.651 [Module Loader](DEBUG): Loading Module at Modules/Guidance.so
2017-04-26T16:39:58.972Z,1493224798.972 [Module Loader](DEBUG): Loaded Module: Guidance (Contains behaviors and commands)
2017-04-26T16:39:58.973Z,1493224798.973 [Module Loader](DEBUG): Loading Module at Modules/Navigation.so
2017-04-26T16:39:59.115Z,1493224799.115 [DeadReckonUsingMultipleVelocitySources] Loaded
2017-04-26T16:39:59.116Z,1493224799.116 [ComponentRegistry](DEBUG): SyncComponent "DeadReckonUsingMultipleVelocitySources" handled in the control thread.
2017-04-26T16:39:59.180Z,1493224799.180 [DeadReckonUsingSpeedCalculator] Loaded
2017-04-26T16:39:59.180Z,1493224799.180 [ComponentRegistry](DEBUG): SyncComponent "DeadReckonUsingSpeedCalculator" handled in the control thread.
2017-04-26T16:39:59.197Z,1493224799.197 [NavChart] Loaded
2017-04-26T16:39:59.197Z,1493224799.197 [ComponentRegistry](DEBUG): SyncComponent "NavChart" handled in the control thread.
2017-04-26T16:39:59.206Z,1493224799.206 [UniversalFixResidualReporter] Loaded
2017-04-26T16:39:59.206Z,1493224799.206 [ComponentRegistry](DEBUG): SyncComponent "UniversalFixResidualReporter" handled in the control thread.
2017-04-26T16:39:59.207Z,1493224799.207 [Module Loader](DEBUG): Loaded Module: Navigation (Contains the base navigation components)
2017-04-26T16:39:59.207Z,1493224799.207 [Module Loader](DEBUG): Loading Module at Modules/Sample.so
2017-04-26T16:39:59.217Z,1493224799.217 [Module Loader](DEBUG): Loaded Module: Sample (This is a Sample Module of Sample Components)
2017-04-26T16:39:59.218Z,1493224799.218 [Module Loader](DEBUG): Loading Module at Modules/Science.so
2017-04-26T16:39:59.431Z,1493224799.431 [Aanderaa_O2] Loaded
2017-04-26T16:39:59.432Z,1493224799.432 [ComponentRegistry](DEBUG): SyncComponent "Aanderaa_O2" handled in the control thread.
2017-04-26T16:39:59.521Z,1493224799.521 [CTD_NeilBrown] Loaded
2017-04-26T16:39:59.521Z,1493224799.521 [ComponentRegistry](DEBUG): Component "CTD_NeilBrown" handled in its own thread.
2017-04-26T16:39:59.523Z,1493224799.523 [CTD_NeilBrown ThreadHandler](DEBUG): Created PCaller Thread at 407734E0
2017-04-26T16:39:59.524Z,1493224799.523 [CTD_NeilBrown ThreadHandler](INFO): Protected caller Thread ID is 855
2017-04-26T16:39:59.905Z,1493224799.905 [CTD_Seabird] Loaded
2017-04-26T16:39:59.906Z,1493224799.906 [ComponentRegistry](DEBUG): Component "CTD_Seabird" handled in its own thread.
2017-04-26T16:39:59.907Z,1493224799.907 [CTD_Seabird ThreadHandler](DEBUG): Created PCaller Thread at 407A34E0
2017-04-26T16:39:59.908Z,1493224799.908 [CTD_Seabird ThreadHandler](INFO): Protected caller Thread ID is 856
2017-04-26T16:39:59.923Z,1493224799.923 [PAR_Licor] Loaded
2017-04-26T16:39:59.923Z,1493224799.923 [ComponentRegistry](DEBUG): SyncComponent "PAR_Licor" handled in the control thread.
2017-04-26T16:39:59.982Z,1493224799.982 [WetLabsBB2FL] Loaded
2017-04-26T16:39:59.982Z,1493224799.982 [ComponentRegistry](DEBUG): Component "WetLabsBB2FL" handled in its own thread.
2017-04-26T16:39:59.987Z,1493224799.987 [WetLabsBB2FL ThreadHandler](DEBUG): Created PCaller Thread at 407D34E0
2017-04-26T16:39:59.988Z,1493224799.987 [WetLabsBB2FL ThreadHandler](INFO): Protected caller Thread ID is 857
2017-04-26T16:39:59.988Z,1493224799.988 [Module Loader](DEBUG): Loaded Module: Science (Contains the science components)
2017-04-26T16:39:59.989Z,1493224799.989 [Module Loader](DEBUG): Loading Module at Modules/Sensor.so
2017-04-26T16:40:00.677Z,1493224800.677 [DataOverHttps] Loaded
2017-04-26T16:40:00.677Z,1493224800.677 [ComponentRegistry](DEBUG): SyncComponent "DataOverHttps" handled in the control thread.
2017-04-26T16:40:00.691Z,1493224800.691 [Depth_Keller] Loaded
2017-04-26T16:40:00.692Z,1493224800.692 [ComponentRegistry](DEBUG): SyncComponent "Depth_Keller" handled in the control thread.
2017-04-26T16:40:00.701Z,1493224800.701 [DropWeight] Loaded
2017-04-26T16:40:00.701Z,1493224800.701 [ComponentRegistry](DEBUG): SyncComponent "DropWeight" handled in the control thread.
2017-04-26T16:40:00.803Z,1493224800.803 [NAL9602] Loaded
2017-04-26T16:40:00.803Z,1493224800.803 [ComponentRegistry](DEBUG): SyncComponent "NAL9602" handled in the control thread.
2017-04-26T16:40:00.813Z,1493224800.813 [Onboard] Loaded
2017-04-26T16:40:00.813Z,1493224800.813 [ComponentRegistry](DEBUG): SyncComponent "Onboard" handled in the control thread.
2017-04-26T16:40:00.824Z,1493224800.824 [Radio_Surface] Loaded
2017-04-26T16:40:00.825Z,1493224800.825 [ComponentRegistry](DEBUG): Component "Radio_Surface" handled in its own thread.
2017-04-26T16:40:00.827Z,1493224800.827 [Radio_Surface ThreadHandler](DEBUG): Created PCaller Thread at 40A1E4E0
2017-04-26T16:40:00.827Z,1493224800.828 [Radio_Surface ThreadHandler](INFO): Protected caller Thread ID is 858
2017-04-26T16:40:01.048Z,1493224801.048 [PNI_TCM] Loaded
2017-04-26T16:40:01.048Z,1493224801.048 [ComponentRegistry](DEBUG): SyncComponent "PNI_TCM" handled in the control thread.
2017-04-26T16:40:03.102Z,1493224803.102 [BPC1] Loaded
2017-04-26T16:40:03.102Z,1493224803.102 [ComponentRegistry](DEBUG): SyncComponent "BPC1" handled in the control thread.
2017-04-26T16:40:03.103Z,1493224803.103 [Module Loader](DEBUG): Loaded Module: Sensor (Contains the sensor components)
2017-04-26T16:40:03.104Z,1493224803.103 [Module Loader](DEBUG): Loading Module at Modules/Servo.so
2017-04-26T16:40:03.244Z,1493224803.244 [BuoyancyServo] Loaded
2017-04-26T16:40:03.245Z,1493224803.245 [ComponentRegistry](DEBUG): SyncComponent "BuoyancyServo" handled in the control thread.
2017-04-26T16:40:03.257Z,1493224803.257 [ElevatorServo] Loaded
2017-04-26T16:40:03.257Z,1493224803.257 [ComponentRegistry](DEBUG): SyncComponent "ElevatorServo" handled in the control thread.
2017-04-26T16:40:03.269Z,1493224803.269 [MassServo] Loaded
2017-04-26T16:40:03.269Z,1493224803.269 [ComponentRegistry](DEBUG): SyncComponent "MassServo" handled in the control thread.
2017-04-26T16:40:03.281Z,1493224803.281 [RudderServo] Loaded
2017-04-26T16:40:03.282Z,1493224803.282 [ComponentRegistry](DEBUG): SyncComponent "RudderServo" handled in the control thread.
2017-04-26T16:40:03.297Z,1493224803.297 [ThrusterServo] Loaded
2017-04-26T16:40:03.297Z,1493224803.297 [ComponentRegistry](DEBUG): SyncComponent "ThrusterServo" handled in the control thread.
2017-04-26T16:40:03.298Z,1493224803.298 [Module Loader](DEBUG): Loaded Module: Servo (This is the module containing motor controllers)
2017-04-26T16:40:03.299Z,1493224803.299 [Module Loader](DEBUG): Loading Module at Modules/Simulator.so
2017-04-26T16:40:03.465Z,1493224803.465 [Module Loader](DEBUG): Loaded Module: Simulator (This is the module containing the Simulator)
2017-04-26T16:40:03.466Z,1493224803.466 [Module Loader](DEBUG): Loading Module at Modules/Trigger.so
2017-04-26T16:40:03.512Z,1493224803.512 [Module Loader](DEBUG): Loaded Module: Trigger (Contains triggers for use in missions)
2017-04-26T16:40:03.516Z,1493224803.516 [ComponentRegistry](DEBUG): SyncComponent "MissionManager" handled in the control thread.
2017-04-26T16:40:03.517Z,1493224803.517 [ComponentRegistry](DEBUG): SyncComponent "Reporter" handled in the control thread.
2017-04-26T16:40:03.524Z,1493224803.524 [ComponentRegistry](DEBUG): Component "NavChartDb" handled in its own thread.
2017-04-26T16:40:03.527Z,1493224803.527 [NavChartDb ThreadHandler](DEBUG): Created PCaller Thread at 40ACC4E0
2017-04-26T16:40:03.528Z,1493224803.528 [NavChartDb ThreadHandler](INFO): Protected caller Thread ID is 859
2017-04-26T16:40:03.533Z,1493224803.533 [Supervisor](INFO): Main Thread ID is 765
2017-04-26T16:40:03.533Z,1493224803.533 [Supervisor](DEBUG): Running supervisor.
2017-04-26T16:40:03.533Z,1493224803.533 [CommandLine ThreadHandler](INFO): Handler Thread ID is 860
2017-04-26T16:40:03.540Z,1493224803.540 [controlThread ThreadHandler](INFO): Handler Thread ID is 861
2017-04-26T16:40:03.540Z,1493224803.540 [controlThread](DEBUG): Initializing ControlThread
2017-04-26T16:40:03.541Z,1493224803.541 [VerticalControl](DEBUG): Initialize VerticalControlComponent.
2017-04-26T16:40:03.543Z,1493224803.543 [HorizontalControl](DEBUG): Initialize HorizontalControlComponent.
2017-04-26T16:40:03.544Z,1493224803.544 [SpeedControl](DEBUG): Initialize SpeedControlComponent.
2017-04-26T16:40:03.544Z,1493224803.544 [LoopControl](DEBUG): Initialize LoopControlComponent.
2017-04-26T16:40:03.545Z,1493224803.545 [SBIT](INFO): Initialize SBIT Component.
2017-04-26T16:40:03.545Z,1493224803.545 [SBIT](IMPORTANT): git: 2017-04-19-5-g443ab08
2017-04-26T16:40:03.545Z,1493224803.545 [SBIT](INFO): git hash: 443ab0852958b11c27b2467e632b948d2f0b0b23
2017-04-26T16:40:03.547Z,1493224803.547 [SBIT](INFO): Kernel Reporting Different Release From Configuration.
Kernel Expected: 2.6.27.8
Kernel Reported: 2.6.27.8-00011-g2bc81df-dirty
2017-04-26T16:40:03.547Z,1493224803.547 [SBIT](INFO): Kernel Reporting Different Version From Configuration.
Kernel Expected: #639 PREEMPT Wed Mar 12 12:53:33 PDT 2014
Kernel Reported: #646 PREEMPT Thu Feb 11 17:01:12 PST 2016
2017-04-26T16:40:03.548Z,1493224803.548 [SBIT](INFO): Beginning SBIT in 39.000000 seconds.
2017-04-26T16:40:03.549Z,1493224803.549 [IBIT](INFO): Initialize IBIT Component.
2017-04-26T16:40:03.550Z,1493224803.550 [CBIT](DEBUG): Initialize CBIT Component.
2017-04-26T16:40:03.550Z,1493224803.550 [CBIT](CRITICAL): LAST REBOOT DUE TO WATCHDOG TIMER RESET.
2017-04-26T16:40:03.552Z,1493224803.552 [logger ThreadHandler](INFO): Handler Thread ID is 862
2017-04-26T16:40:03.596Z,1493224803.596 [CTD_NeilBrown ThreadHandler](INFO): Handler Thread ID is 863
2017-04-26T16:40:03.596Z,1493224803.596 [CTD_NeilBrown](INFO): Powering down
2017-04-26T16:40:03.631Z,1493224803.631 [DepthRateCalculator](DEBUG): Initializing DepthRateCalculator.
2017-04-26T16:40:03.632Z,1493224803.632 [PitchRateCalculator](DEBUG): Initializing PitchRateCalculator.
2017-04-26T16:40:03.632Z,1493224803.632 [SpeedCalculator](DEBUG): Initializing SpeedCalculator.
2017-04-26T16:40:03.632Z,1493224803.632 [TempGradientCalculator](DEBUG): Initializing TempGradientCalculator.
2017-04-26T16:40:03.633Z,1493224803.633 [VerticalTemperatureHomogeneityIndexCalculator](DEBUG): (re)initializing
2017-04-26T16:40:03.633Z,1493224803.634 [YawRateCalculator](DEBUG): Initializing YawRateCalculator.
2017-04-26T16:40:03.634Z,1493224803.634 [DeadReckonUsingMultipleVelocitySources](DEBUG): Initializing DeadReckonUsingMultipleVelocitySources component.
2017-04-26T16:40:03.635Z,1493224803.635 [DeadReckonUsingMultipleVelocitySources](INFO): Will consider orientation measurement stale after 120s.
2017-04-26T16:40:03.636Z,1493224803.636 [DeadReckonUsingMultipleVelocitySources](INFO): Will consider velocity measurement stale after 20s.
2017-04-26T16:40:03.636Z,1493224803.636 [DeadReckonUsingSpeedCalculator](DEBUG): Initializing DeadReckonUsingSpeedCalculator component.
2017-04-26T16:40:03.637Z,1493224803.637 [DeadReckonUsingSpeedCalculator](INFO): Will consider orientation measurement stale after 120s.
2017-04-26T16:40:03.637Z,1493224803.637 [DeadReckonUsingSpeedCalculator](INFO): Will consider velocity measurement stale after 20s.
2017-04-26T16:40:03.637Z,1493224803.637 [NavChart](DEBUG): Initialize NavChart Navigation.
2017-04-26T16:40:03.638Z,1493224803.638 [UniversalFixResidualReporter](DEBUG): Initializing UniversalFixResidualReporter component.
2017-04-26T16:40:03.648Z,1493224803.648 [CTD_Seabird ThreadHandler](INFO): Handler Thread ID is 864
2017-04-26T16:40:03.648Z,1493224803.648 [CTD_Seabird](INFO): Initializing
2017-04-26T16:40:03.680Z,1493224803.681 [MissionManager](INFO): Loading Mission: Missions/Startup.xml
2017-04-26T16:40:03.696Z,1493224803.696 [WetLabsBB2FL ThreadHandler](INFO): Handler Thread ID is 866
2017-04-26T16:40:03.699Z,1493224803.699 [WetLabsBB2FL](INFO): Powering down
2017-04-26T16:40:03.724Z,1493224803.724 [Radio_Surface ThreadHandler](INFO): Handler Thread ID is 867
2017-04-26T16:40:03.730Z,1493224803.730 [Radio_Surface](INFO): Powering up
2017-04-26T16:40:03.737Z,1493224803.737 [NavChartDb ThreadHandler](INFO): Handler Thread ID is 868
2017-04-26T16:40:03.749Z,1493224803.749 [NavChartDb](INFO): Looking for Electronic Nav Chart file at: Resources/ElectronicNavigationCharts/US1WC07M.000
2017-04-26T16:40:03.749Z,1493224803.749 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US1WC07M.000
2017-04-26T16:40:03.750Z,1493224803.750 [NavChartDb](INFO): Looking for Electronic Nav Chart file at: Resources/ElectronicNavigationCharts/US2WC11M.000
2017-04-26T16:40:03.750Z,1493224803.750 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US2WC11M.000
2017-04-26T16:40:03.750Z,1493224803.750 [NavChartDb](INFO): Looking for Electronic Nav Chart file at: Resources/ElectronicNavigationCharts/US3CA52M.000
2017-04-26T16:40:03.750Z,1493224803.750 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US3CA52M.000
2017-04-26T16:40:03.751Z,1493224803.750 [NavChartDb](INFO): Looking for Electronic Nav Chart file at: Resources/ElectronicNavigationCharts/US4CA60M.000
2017-04-26T16:40:03.751Z,1493224803.751 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US4CA60M.000
2017-04-26T16:40:03.751Z,1493224803.751 [NavChartDb](INFO): Looking for Electronic Nav Chart file at: Resources/ElectronicNavigationCharts/US5CA50M.000
2017-04-26T16:40:03.751Z,1493224803.751 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA50M.000
2017-04-26T16:40:03.751Z,1493224803.751 [NavChartDb](INFO): Looking for Electronic Nav Chart file at: Resources/ElectronicNavigationCharts/US5CA61M.000
2017-04-26T16:40:03.752Z,1493224803.752 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA61M.000
2017-04-26T16:40:03.752Z,1493224803.752 [NavChartDb](INFO): Looking for Electronic Nav Chart file at: Resources/ElectronicNavigationCharts/US5CA62M.000
2017-04-26T16:40:03.752Z,1493224803.752 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA62M.000
2017-04-26T16:40:03.752Z,1493224803.752 [NavChartDb](INFO): Looking for Electronic Nav Chart file at: Resources/ElectronicNavigationCharts/US5CA83M.000
2017-04-26T16:40:03.752Z,1493224803.752 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA83M.000
2017-04-26T16:40:03.766Z,1493224803.766 [Startup:A.GoToSurface](DEBUG): Construct GoToSurface.
2017-04-26T16:40:03.790Z,1493224803.790 [MissionManager](DEBUG): 
<?xml version="1.0" encoding="UTF-8"?>
<Mission xmlns="Tethys"
       xmlns:Control="Tethys/Control"
       xmlns:Guidance="Tethys/Guidance" 
       xmlns:Units="Tethys/Units"
       xmlns:Universal="Tethys/Universal"
       xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
       xsi:schemaLocation="Tethys http://okeanids.mbari.org/tethys/Xml/Tethys.xsd
                           Tethys/Control http://okeanids.mbari.org/tethys/Xml/Control.xsd
                           Tethys/Guidance http://okeanids.mbari.org/tethys/Xml/Guidance.xsd
                           Tethys/Units http://okeanids.mbari.org/tethys/Xml/Units.xsd
                           Tethys/Universal http://okeanids.mbari.org/tethys/Xml/Universal.xsd"
       Id="Startup">

    <Guidance:GoToSurface>
        <Progression/>
    </Guidance:GoToSurface>

    <Aggregate Id="StartupSatComms">

        <Sequence/>

        <ReadDatum>
            <Timeout Duration="P1M" />
            <Universal:latitude_fix/>
        </ReadDatum>

        <ReadDatum>
            <Timeout Duration="P1M" />
            <Universal:platform_communications/>
        </ReadDatum>

    </Aggregate>

</Mission>


2017-04-26T16:40:03.827Z,1493224803.827 [MissionManager](INFO): Loading Mission: Missions/Default.xml
2017-04-26T16:40:03.919Z,1493224803.920 [MissionManager](INFO): DefineArg Default.ElapsedSinceDefaultStarted = 0.000000 min
2017-04-26T16:40:03.921Z,1493224803.921 [Default:A.Wait](DEBUG): Construct Wait.
2017-04-26T16:40:03.922Z,1493224803.922 [Default:B.GoToSurface](DEBUG): Construct GoToSurface.
2017-04-26T16:40:03.969Z,1493224803.969 [CTD_Seabird](INFO): Stopping potential previous instance(s) of CTD_Seabird LCM interface
2017-04-26T16:40:03.969Z,1493224803.969 [CTD_Seabird](INFO): Powering down
2017-04-26T16:40:04.001Z,1493224804.001 [Default:CheckIn:Read_Iridium:A_Timeout:A.Execute](DEBUG): Construct Execute.
2017-04-26T16:40:04.019Z,1493224804.019 [Default:CheckIn:C.Wait](DEBUG): Construct Wait.
2017-04-26T16:40:04.032Z,1493224804.032 [Default:E.Execute](DEBUG): Construct Execute.
2017-04-26T16:40:04.052Z,1493224804.052 [MissionManager](DEBUG): 
<?xml version="1.0" encoding="UTF-8"?>
<Mission xmlns="Tethys"
xmlns:Guidance="Tethys/Guidance"
xmlns:Units="Tethys/Units"
xmlns:Universal="Tethys/Universal"
xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
xsi:schemaLocation="Tethys http://okeanids.mbari.org/tethys/Xml/Tethys.xsd
Tethys/Guidance http://okeanids.mbari.org/tethys/Xml/Guidance.xsd
Tethys/Units http://okeanids.mbari.org/tethys/Xml/Units.xsd
Tethys/Universal http://okeanids.mbari.org/tethys/Xml/Universal.xsd"
Id="Default">

    <DefineArg Name="ElapsedSinceDefaultStarted"><Units:minute/><Value>0</Value></DefineArg>

    <Guidance:Wait>
        <Sequence/>
        <Description>
            Wait a moment to see if the scheduler starts a new mission before
            starting to actually run Default.
        </Description>
        <Setting><Guidance:Wait.duration/><Units:second/><Value>13</Value></Setting>
    </Guidance:Wait>

    <Guidance:GoToSurface>
        <Progression/>
    </Guidance:GoToSurface>

    <Aggregate Id="CheckIn">

        <Sequence Repeat="288"/>

        <ReadDatum Id="Read_GPS">
            <Sequence/>
            <Timeout Duration="P5M"/>
            <Universal:time_fix/>
        </ReadDatum>

        <ReadDatum Id="Read_Iridium">
            <Sequence/>
            <Timeout Duration="P2H">
                <Guidance:Execute>
                    <Sequence/>
                    <Setting><Guidance:Execute.command/><String>Burn 300</String></Setting>
                </Guidance:Execute>
                <Syslog Severity="Critical">Dropped weight due to communications timeout.</Syslog>
            </Timeout>
            <Universal:platform_communications/>
        </ReadDatum>

        <Guidance:Wait>
            <Sequence/>
            <Setting><Guidance:Wait.duration/><Units:minute/><Value>5</Value></Setting>
        </Guidance:Wait>

        <Assign><Sequence/><Arg Name="ElapsedSinceDefaultStarted"/><Elapsed><Universal:mission_started/></Elapsed></Assign>

        <Syslog Severity="Important">Default mission has been running for <Arg Name="ElapsedSinceDefaultStarted"/><Units:minute/></Syslog>

    </Aggregate>

    <Syslog Severity="Important">Restarting logs and Default mission.</Syslog>

    <Guidance:Execute>
        <Sequence/>
        <Setting><Guidance:Execute.command/><String>restart logs</String></Setting>
    </Guidance:Execute>

</Mission>


2017-04-26T16:40:04.057Z,1493224804.057 [controlThread](DEBUG): Component order: CycleStarter,Aanderaa_O2,PAR_Licor,DataOverHttps,Depth_Keller,DropWeight,NAL9602,Onboard,PNI_TCM,BPC1,PAR_Licor,Depth_Keller,DepthRateCalculator,PitchRateCalculator,SpeedCalculator,TempGradientCalculator,VerticalTemperatureHomogeneityIndexCalculator,YawRateCalculator,StratificationFrontDetector,DepAvgTempFrontDetector,DeadReckonUsingMultipleVelocitySources,DeadReckonUsingSpeedCalculator,NavChart,UniversalFixResidualReporter,MissionManager,VerticalControl,HorizontalControl,SpeedControl,LoopControl,BuoyancyServo,ElevatorServo,MassServo,RudderServo,ThrusterServo,SBIT,IBIT,CBIT,Reporter,LogSplitter,
2017-04-26T16:40:04.208Z,1493224804.208 [DataOverHttps](DEBUG): dashIP=134.89.2.23 starts with a digit so assuming it is a numeric IP
2017-04-26T16:40:04.221Z,1493224804.221 [Depth_Keller](ERROR): Pressure reading out of range: 1831.023193 decibar
2017-04-26T16:40:04.433Z,1493224804.433 [DepthRateCalculator](ERROR): Depth measurement is not active
2017-04-26T16:40:04.560Z,1493224804.560 [DeadReckonUsingMultipleVelocitySources](DEBUG): Starting up and don't have orientation data yet.
2017-04-26T16:40:04.955Z,1493224804.955 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2017-04-26T16:40:05.064Z,1493224805.064 [BuoyancyServo](DEBUG): Initializing EZServoServo.
2017-04-26T16:40:05.072Z,1493224805.072 [BuoyancyServo](DEBUG): Initializing BuoyancyServo.
2017-04-26T16:40:05.094Z,1493224805.094 [ElevatorServo](DEBUG): Initializing EZServoServo.
2017-04-26T16:40:05.100Z,1493224805.099 [ElevatorServo](DEBUG): Initializing ElevatorServo.
2017-04-26T16:40:05.116Z,1493224805.116 [MassServo](DEBUG): Initializing EZServoServo.
2017-04-26T16:40:05.123Z,1493224805.123 [MassServo](DEBUG): Initializing MassServo.
2017-04-26T16:40:05.130Z,1493224805.130 [RudderServo](DEBUG): Initializing EZServoServo.
2017-04-26T16:40:05.139Z,1493224805.139 [RudderServo](DEBUG): Initializing RudderServo.
2017-04-26T16:40:05.153Z,1493224805.153 [ThrusterServo](DEBUG): Initializing EZServoServo.
2017-04-26T16:40:05.160Z,1493224805.159 [ThrusterServo](DEBUG): Initializing ThrusterServo.
2017-04-26T16:40:05.193Z,1493224805.193 [CommandLine](FAULT): Scheduling is paused
2017-04-26T16:40:05.194Z,1493224805.194 [CBIT](INFO): Critical error at 20170426T164003
2017-04-26T16:40:05.194Z,1493224805.194 [Supervisor](INFO): Stop Mission called by CBIT::checkCriticals
2017-04-26T16:40:05.497Z,1493224805.497 [DeadReckonUsingMultipleVelocitySources](DEBUG)