2015-09-29T15:41:52.333Z,1443541312.333 [Supervisor](DEBUG): Initializing supervisor.
2015-09-29T15:41:52.339Z,1443541312.339 [SyncHandler](DEBUG): Created PCaller Thread at 4034C4E0
2015-09-29T15:41:52.339Z,1443541312.339 [SyncHandler](INFO): Protected caller Thread ID is 763
2015-09-29T15:41:52.340Z,1443541312.340 [ComponentRegistry](DEBUG): Component "controlThread" handled in its own thread.
2015-09-29T15:41:52.343Z,1443541312.343 [controlThread ThreadHandler](DEBUG): Created PCaller Thread at 4037C4E0
2015-09-29T15:41:52.343Z,1443541312.343 [controlThread ThreadHandler](INFO): Protected caller Thread ID is 764
2015-09-29T15:41:52.346Z,1443541312.346 [ComponentRegistry](DEBUG): SyncComponent "CycleStarter" handled in the control thread.
2015-09-29T15:41:52.358Z,1443541312.358 [ComponentRegistry](DEBUG): Component "CommandLine" handled in its own thread.
2015-09-29T15:41:52.363Z,1443541312.363 [CommandLine ThreadHandler](DEBUG): Created PCaller Thread at 403AC4E0
2015-09-29T15:41:52.363Z,1443541312.363 [CommandLine ThreadHandler](INFO): Protected caller Thread ID is 765
2015-09-29T15:41:52.364Z,1443541312.364 [ComponentRegistry](DEBUG): Component "logger" handled in its own thread.
2015-09-29T15:41:52.367Z,1443541312.367 [logger ThreadHandler](DEBUG): Created PCaller Thread at 403DC4E0
2015-09-29T15:41:52.367Z,1443541312.367 [logger ThreadHandler](INFO): Protected caller Thread ID is 766
2015-09-29T15:41:52.369Z,1443541312.369 [ComponentRegistry](DEBUG): SyncComponent "LogSplitter" handled in the control thread.
2015-09-29T15:41:52.370Z,1443541312.370 [Supervisor](INFO): Looking for Config files in directory: Config/
2015-09-29T15:41:52.373Z,1443541312.373 [Supervisor](INFO): Opening Config file at: Config/Control.cfg
2015-09-29T15:41:52.755Z,1443541312.755 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Control
2015-09-29T15:41:52.759Z,1443541312.759 [Supervisor](INFO): Opening Config file at: Config/BIT.cfg
2015-09-29T15:41:52.947Z,1443541312.947 [ComponentRegistry](DEBUG): Loaded Config Component "Config/BIT
2015-09-29T15:41:52.949Z,1443541312.949 [Supervisor](INFO): Opening Config file at: Config/Derivation.cfg
2015-09-29T15:41:53.096Z,1443541313.096 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Derivation
2015-09-29T15:41:53.097Z,1443541313.097 [Supervisor](INFO): Opening Config file at: Config/Estimation.cfg
2015-09-29T15:41:53.246Z,1443541313.246 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Estimation
2015-09-29T15:41:53.247Z,1443541313.247 [Supervisor](INFO): Opening Config file at: Config/Guidance.cfg
2015-09-29T15:41:53.343Z,1443541313.343 [Supervisor](INFO): Opening Config file at: Config/Navigation.cfg
2015-09-29T15:41:53.563Z,1443541313.563 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Navigation
2015-09-29T15:41:53.564Z,1443541313.564 [Supervisor](INFO): Opening Config file at: Config/Sample.cfg
2015-09-29T15:41:53.659Z,1443541313.659 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Sample
2015-09-29T15:41:53.660Z,1443541313.660 [Supervisor](INFO): Opening Config file at: Config/Science.cfg
2015-09-29T15:41:53.972Z,1443541313.972 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Science
2015-09-29T15:41:53.973Z,1443541313.973 [Supervisor](INFO): Opening Config file at: Config/Sensor.cfg
2015-09-29T15:41:54.372Z,1443541314.372 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Sensor
2015-09-29T15:41:54.373Z,1443541314.373 [Supervisor](INFO): Opening Config file at: Config/Servo.cfg
2015-09-29T15:41:54.724Z,1443541314.724 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Servo
2015-09-29T15:41:54.726Z,1443541314.726 [Supervisor](INFO): Opening Config file at: Config/Simulator.cfg
2015-09-29T15:41:55.320Z,1443541315.320 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Simulator
2015-09-29T15:41:55.321Z,1443541315.321 [Supervisor](INFO): Opening Config file at: Config/logger.cfg
2015-09-29T15:41:55.552Z,1443541315.552 [ComponentRegistry](DEBUG): Loaded Config Component "Config/logger
2015-09-29T15:41:55.553Z,1443541315.553 [Supervisor](INFO): Opening Config file at: Config/secure.cfg
2015-09-29T15:41:55.672Z,1443541315.672 [ComponentRegistry](DEBUG): Loaded Config Component "Config/secure
2015-09-29T15:41:55.673Z,1443541315.673 [Supervisor](INFO): Opening Config file at: Config/vehicle.cfg
2015-09-29T15:41:56.198Z,1443541316.198 [ComponentRegistry](DEBUG): Loaded Config Component "Config/vehicle
2015-09-29T15:41:56.199Z,1443541316.199 [Supervisor](INFO): Opening Config file at: Config/workSite.cfg
2015-09-29T15:41:56.322Z,1443541316.322 [ComponentRegistry](DEBUG): Loaded Config Component "Config/workSite
2015-09-29T15:41:56.324Z,1443541316.324 [Supervisor](INFO): Looking for Config files in directory: Config/(none)/
2015-09-29T15:41:56.324Z,1443541316.324 [Supervisor](FAULT): Ignoring configuration overrides from Data/persisted.cfg
2015-09-29T15:41:56.329Z,1443541316.329 [Module Loader](DEBUG): Loading Module at Modules/Control.so
2015-09-29T15:41:56.403Z,1443541316.403 [VerticalControl](DEBUG): Construct VerticalControl.
2015-09-29T15:41:56.536Z,1443541316.536 [VerticalControl] Loaded
2015-09-29T15:41:56.536Z,1443541316.536 [ComponentRegistry](DEBUG): SyncComponent "VerticalControl" handled in the control thread.
2015-09-29T15:41:56.537Z,1443541316.537 [HorizontalControl](DEBUG): Construct HorizontalControl.
2015-09-29T15:41:56.617Z,1443541316.617 [HorizontalControl] Loaded
2015-09-29T15:41:56.618Z,1443541316.618 [ComponentRegistry](DEBUG): SyncComponent "HorizontalControl" handled in the control thread.
2015-09-29T15:41:56.618Z,1443541316.618 [SpeedControl](DEBUG): Construct SpeedControl.
2015-09-29T15:41:56.624Z,1443541316.624 [SpeedControl] Loaded
2015-09-29T15:41:56.625Z,1443541316.625 [ComponentRegistry](DEBUG): SyncComponent "SpeedControl" handled in the control thread.
2015-09-29T15:41:56.625Z,1443541316.625 [LoopControl](DEBUG): Construct LoopControl.
2015-09-29T15:41:56.626Z,1443541316.626 [LoopControl] Loaded
2015-09-29T15:41:56.626Z,1443541316.626 [ComponentRegistry](DEBUG): SyncComponent "LoopControl" handled in the control thread.
2015-09-29T15:41:56.626Z,1443541316.626 [Module Loader](DEBUG): Loaded Module: Control (Contains the Control components, such as Depth, Heading, and Speed Control)
2015-09-29T15:41:56.627Z,1443541316.627 [Module Loader](DEBUG): Loading Module at Modules/BIT.so
2015-09-29T15:41:56.789Z,1443541316.789 [SBIT](DEBUG): Construct Startup Built In Test.
2015-09-29T15:41:56.801Z,1443541316.801 [SBIT] Loaded
2015-09-29T15:41:56.802Z,1443541316.802 [ComponentRegistry](DEBUG): SyncComponent "SBIT" handled in the control thread.
2015-09-29T15:41:56.803Z,1443541316.803 [IBIT](DEBUG): Construct Initiated Built In Test.
2015-09-29T15:41:56.836Z,1443541316.836 [IBIT] Loaded
2015-09-29T15:41:56.836Z,1443541316.836 [ComponentRegistry](DEBUG): SyncComponent "IBIT" handled in the control thread.
2015-09-29T15:41:56.839Z,1443541316.839 [CBIT](DEBUG): Construct Continuous Built In Test.
2015-09-29T15:41:56.992Z,1443541316.992 [CBIT] Loaded
2015-09-29T15:41:56.993Z,1443541316.993 [ComponentRegistry](DEBUG): SyncComponent "CBIT" handled in the control thread.
2015-09-29T15:41:56.993Z,1443541316.993 [Module Loader](DEBUG): Loaded Module: BIT (Contains the BuiltInTest components, such as C Built In Test)
2015-09-29T15:41:56.994Z,1443541316.994 [Module Loader](DEBUG): Loading Module at Modules/Derivation.so
2015-09-29T15:41:57.035Z,1443541317.035 [DepthRateCalculator] Loaded
2015-09-29T15:41:57.035Z,1443541317.035 [ComponentRegistry](DEBUG): SyncComponent "DepthRateCalculator" handled in the control thread.
2015-09-29T15:41:57.041Z,1443541317.041 [PitchRateCalculator] Loaded
2015-09-29T15:41:57.041Z,1443541317.041 [ComponentRegistry](DEBUG): SyncComponent "PitchRateCalculator" handled in the control thread.
2015-09-29T15:41:57.056Z,1443541317.056 [SpeedCalculator] Loaded
2015-09-29T15:41:57.057Z,1443541317.057 [ComponentRegistry](DEBUG): SyncComponent "SpeedCalculator" handled in the control thread.
2015-09-29T15:41:57.074Z,1443541317.074 [TempGradientCalculator] Loaded
2015-09-29T15:41:57.074Z,1443541317.074 [ComponentRegistry](DEBUG): SyncComponent "TempGradientCalculator" handled in the control thread.
2015-09-29T15:41:57.095Z,1443541317.095 [VerticalTemperatureHomogeneityIndexCalculator] Loaded
2015-09-29T15:41:57.096Z,1443541317.096 [ComponentRegistry](DEBUG): SyncComponent "VerticalTemperatureHomogeneityIndexCalculator" handled in the control thread.
2015-09-29T15:41:57.101Z,1443541317.101 [YawRateCalculator] Loaded
2015-09-29T15:41:57.101Z,1443541317.101 [ComponentRegistry](DEBUG): SyncComponent "YawRateCalculator" handled in the control thread.
2015-09-29T15:41:57.102Z,1443541317.102 [Module Loader](DEBUG): Loaded Module: Derivation (Contains the base derivation components)
2015-09-29T15:41:57.102Z,1443541317.102 [Module Loader](DEBUG): Loading Module at Modules/Estimation.so
2015-09-29T15:41:57.225Z,1443541317.225 [StratificationFrontDetector](INFO): threshold set to: 0.399988 degC
2015-09-29T15:41:57.225Z,1443541317.225 [StratificationFrontDetector](DEBUG): (re)initializing
2015-09-29T15:41:57.226Z,1443541317.226 [StratificationFrontDetector] Loaded
2015-09-29T15:41:57.226Z,1443541317.226 [ComponentRegistry](DEBUG): SyncComponent "StratificationFrontDetector" handled in the control thread.
2015-09-29T15:41:57.226Z,1443541317.226 [Module Loader](DEBUG): Loaded Module: Estimation (Contains the base estimation components)
2015-09-29T15:41:57.227Z,1443541317.227 [Module Loader](DEBUG): Loading Module at Modules/Guidance.so
2015-09-29T15:41:57.518Z,1443541317.518 [Module Loader](DEBUG): Loaded Module: Guidance (Contains behaviors and commands)
2015-09-29T15:41:57.519Z,1443541317.519 [Module Loader](DEBUG): Loading Module at Modules/Navigation.so
2015-09-29T15:41:57.648Z,1443541317.648 [DeadReckonUsingMultipleVelocitySources] Loaded
2015-09-29T15:41:57.649Z,1443541317.649 [ComponentRegistry](DEBUG): SyncComponent "DeadReckonUsingMultipleVelocitySources" handled in the control thread.
2015-09-29T15:41:57.713Z,1443541317.713 [DeadReckonUsingSpeedCalculator] Loaded
2015-09-29T15:41:57.713Z,1443541317.713 [ComponentRegistry](DEBUG): SyncComponent "DeadReckonUsingSpeedCalculator" handled in the control thread.
2015-09-29T15:41:57.731Z,1443541317.731 [NavChart] Loaded
2015-09-29T15:41:57.731Z,1443541317.731 [ComponentRegistry](DEBUG): SyncComponent "NavChart" handled in the control thread.
2015-09-29T15:41:57.736Z,1443541317.736 [UniversalFixResidualReporter] Loaded
2015-09-29T15:41:57.737Z,1443541317.737 [ComponentRegistry](DEBUG): SyncComponent "UniversalFixResidualReporter" handled in the control thread.
2015-09-29T15:41:57.737Z,1443541317.737 [Module Loader](DEBUG): Loaded Module: Navigation (Contains the base navigation components)
2015-09-29T15:41:57.738Z,1443541317.738 [Module Loader](DEBUG): Loading Module at Modules/Sample.so
2015-09-29T15:41:57.746Z,1443541317.746 [Module Loader](DEBUG): Loaded Module: Sample (This is a Sample Module of Sample Components)
2015-09-29T15:41:57.747Z,1443541317.747 [Module Loader](DEBUG): Loading Module at Modules/Science.so
2015-09-29T15:41:58.044Z,1443541318.044 [CTD_NeilBrown] Loaded
2015-09-29T15:41:58.044Z,1443541318.044 [ComponentRegistry](DEBUG): Component "CTD_NeilBrown" handled in its own thread.
2015-09-29T15:41:58.047Z,1443541318.047 [CTD_NeilBrown ThreadHandler](DEBUG): Created PCaller Thread at 4059D4E0
2015-09-29T15:41:58.047Z,1443541318.047 [CTD_NeilBrown ThreadHandler](INFO): Protected caller Thread ID is 812
2015-09-29T15:41:58.060Z,1443541318.060 [ISUS] Loaded
2015-09-29T15:41:58.060Z,1443541318.060 [ComponentRegistry](DEBUG): SyncComponent "ISUS" handled in the control thread.
2015-09-29T15:41:58.075Z,1443541318.075 [PAR_Licor] Loaded
2015-09-29T15:41:58.075Z,1443541318.075 [ComponentRegistry](DEBUG): SyncComponent "PAR_Licor" handled in the control thread.
2015-09-29T15:41:58.135Z,1443541318.135 [WetLabsBB2FL] Loaded
2015-09-29T15:41:58.135Z,1443541318.135 [ComponentRegistry](DEBUG): Component "WetLabsBB2FL" handled in its own thread.
2015-09-29T15:41:58.139Z,1443541318.139 [WetLabsBB2FL ThreadHandler](DEBUG): Created PCaller Thread at 405CD4E0
2015-09-29T15:41:58.139Z,1443541318.139 [WetLabsBB2FL ThreadHandler](INFO): Protected caller Thread ID is 813
2015-09-29T15:41:58.140Z,1443541318.140 [Module Loader](DEBUG): Loaded Module: Science (Contains the science components)
2015-09-29T15:41:58.140Z,1443541318.140 [Module Loader](DEBUG): Loading Module at Modules/Sensor.so
2015-09-29T15:41:58.861Z,1443541318.861 [AHRS_sp3003D] Loaded
2015-09-29T15:41:58.861Z,1443541318.861 [ComponentRegistry](DEBUG): SyncComponent "AHRS_sp3003D" handled in the control thread.
2015-09-29T15:41:59.050Z,1443541319.050 [DataOverHttps] Loaded
2015-09-29T15:41:59.050Z,1443541319.050 [ComponentRegistry](DEBUG): SyncComponent "DataOverHttps" handled in the control thread.
2015-09-29T15:41:59.063Z,1443541319.063 [Depth_Keller] Loaded
2015-09-29T15:41:59.064Z,1443541319.064 [ComponentRegistry](DEBUG): SyncComponent "Depth_Keller" handled in the control thread.
2015-09-29T15:41:59.069Z,1443541319.069 [DropWeight] Loaded
2015-09-29T15:41:59.069Z,1443541319.069 [ComponentRegistry](DEBUG): SyncComponent "DropWeight" handled in the control thread.
2015-09-29T15:41:59.224Z,1443541319.224 [DVL_micro] Loaded
2015-09-29T15:41:59.225Z,1443541319.225 [ComponentRegistry](DEBUG): SyncComponent "DVL_micro" handled in the control thread.
2015-09-29T15:41:59.332Z,1443541319.332 [NAL9602] Loaded
2015-09-29T15:41:59.333Z,1443541319.333 [ComponentRegistry](DEBUG): SyncComponent "NAL9602" handled in the control thread.
2015-09-29T15:41:59.379Z,1443541319.379 [Onboard] Loaded
2015-09-29T15:41:59.379Z,1443541319.379 [ComponentRegistry](DEBUG): SyncComponent "Onboard" handled in the control thread.
2015-09-29T15:41:59.391Z,1443541319.391 [Radio_Surface] Loaded
2015-09-29T15:41:59.391Z,1443541319.391 [ComponentRegistry](DEBUG): Component "Radio_Surface" handled in its own thread.
2015-09-29T15:41:59.395Z,1443541319.395 [Radio_Surface ThreadHandler](DEBUG): Created PCaller Thread at 408114E0
2015-09-29T15:41:59.395Z,1443541319.395 [Radio_Surface ThreadHandler](INFO): Protected caller Thread ID is 814
2015-09-29T15:41:59.553Z,1443541319.553 [DAT] Loaded
2015-09-29T15:41:59.554Z,1443541319.554 [ComponentRegistry](DEBUG): SyncComponent "DAT" handled in the control thread.
2015-09-29T15:41:59.560Z,1443541319.560 [SCPI] Loaded
2015-09-29T15:41:59.561Z,1443541319.561 [ComponentRegistry](DEBUG): SyncComponent "SCPI" handled in the control thread.
2015-09-29T15:41:59.561Z,1443541319.561 [Module Loader](DEBUG): Loaded Module: Sensor (Contains the sensor components)
2015-09-29T15:41:59.562Z,1443541319.562 [Module Loader](DEBUG): Loading Module at Modules/Servo.so
2015-09-29T15:41:59.697Z,1443541319.697 [BuoyancyServo] Loaded
2015-09-29T15:41:59.697Z,1443541319.697 [ComponentRegistry](DEBUG): SyncComponent "BuoyancyServo" handled in the control thread.
2015-09-29T15:41:59.710Z,1443541319.710 [ElevatorServo] Loaded
2015-09-29T15:41:59.710Z,1443541319.710 [ComponentRegistry](DEBUG): SyncComponent "ElevatorServo" handled in the control thread.
2015-09-29T15:41:59.722Z,1443541319.722 [MassServo] Loaded
2015-09-29T15:41:59.722Z,1443541319.722 [ComponentRegistry](DEBUG): SyncComponent "MassServo" handled in the control thread.
2015-09-29T15:41:59.738Z,1443541319.738 [RudderServo] Loaded
2015-09-29T15:41:59.738Z,1443541319.738 [ComponentRegistry](DEBUG): SyncComponent "RudderServo" handled in the control thread.
2015-09-29T15:41:59.749Z,1443541319.749 [ThrusterServo] Loaded
2015-09-29T15:41:59.750Z,1443541319.750 [ComponentRegistry](DEBUG): SyncComponent "ThrusterServo" handled in the control thread.
2015-09-29T15:41:59.750Z,1443541319.750 [Module Loader](DEBUG): Loaded Module: Servo (This is the module containing motor controllers)
2015-09-29T15:41:59.751Z,1443541319.751 [Module Loader](DEBUG): Loading Module at Modules/Simulator.so
2015-09-29T15:41:59.950Z,1443541319.950 [InternalSim] Loaded
2015-09-29T15:41:59.950Z,1443541319.950 [ComponentRegistry](DEBUG): SyncComponent "InternalSim" handled in the control thread.
2015-09-29T15:41:59.951Z,1443541319.951 [Module Loader](DEBUG): Loaded Module: Simulator (This is the module containing the Simulator)
2015-09-29T15:41:59.951Z,1443541319.951 [Module Loader](DEBUG): Loading Module at Modules/Trigger.so
2015-09-29T15:41:59.994Z,1443541319.994 [Module Loader](DEBUG): Loaded Module: Trigger (Contains triggers for use in missions)
2015-09-29T15:41:59.999Z,1443541319.999 [ComponentRegistry](DEBUG): SyncComponent "MissionManager" handled in the control thread.
2015-09-29T15:41:59.000Z,1443541320.000 [ComponentRegistry](DEBUG): SyncComponent "Reporter" handled in the control thread.
2015-09-29T15:42:00.006Z,1443541320.006 [ComponentRegistry](DEBUG): Component "NavChartDb" handled in its own thread.
2015-09-29T15:42:00.011Z,1443541320.011 [NavChartDb ThreadHandler](DEBUG): Created PCaller Thread at 408BF4E0
2015-09-29T15:42:00.011Z,1443541320.011 [NavChartDb ThreadHandler](INFO): Protected caller Thread ID is 815
2015-09-29T15:42:00.016Z,1443541320.016 [Supervisor](INFO): Main Thread ID is 762
2015-09-29T15:42:00.016Z,1443541320.016 [Supervisor](DEBUG): Running supervisor.
2015-09-29T15:42:00.017Z,1443541320.017 [CommandLine ThreadHandler](INFO): Handler Thread ID is 816
2015-09-29T15:42:00.023Z,1443541320.023 [controlThread ThreadHandler](INFO): Handler Thread ID is 817
2015-09-29T15:42:00.024Z,1443541320.024 [controlThread](DEBUG): Initializing ControlThread
2015-09-29T15:42:00.025Z,1443541320.025 [VerticalControl](DEBUG): Initialize VerticalControlComponent.
2015-09-29T15:42:00.026Z,1443541320.026 [HorizontalControl](DEBUG): Initialize HorizontalControlComponent.
2015-09-29T15:42:00.027Z,1443541320.027 [SpeedControl](DEBUG): Initialize SpeedControlComponent.
2015-09-29T15:42:00.028Z,1443541320.028 [LoopControl](DEBUG): Initialize LoopControlComponent.
2015-09-29T15:42:00.028Z,1443541320.028 [SBIT](INFO): Initialize SBIT Component.
2015-09-29T15:42:00.029Z,1443541320.029 [SBIT](IMPORTANT): Tethys CM Info: SVN revision:12634
2015-09-29T15:42:00.030Z,1443541320.030 [SBIT](INFO): Kernel Reporting Different Release From Configuration.
Kernel Expected: 2.6.32-45-generic-pae
Kernel Reported: 2.6.27.8
2015-09-29T15:42:00.030Z,1443541320.030 [SBIT](INFO): Kernel Reporting Different Version From Configuration.
Kernel Expected: #102-Ubuntu SMP Wed Jan 2 22:10:16 UTC 2013
Kernel Reported: #641 PREEMPT Mon Sep 28 16:45:10 PDT 2015
2015-09-29T15:42:00.031Z,1443541320.031 [SBIT](INFO): Beginning SBIT in 20.000000 seconds.
2015-09-29T15:42:00.032Z,1443541320.032 [IBIT](INFO): Initialize IBIT Component.
2015-09-29T15:42:00.033Z,1443541320.033 [CBIT](DEBUG): Initialize CBIT Component.
2015-09-29T15:42:00.033Z,1443541320.033 [CBIT](FAULT): LAST RESTART WAS UNINTENTIONAL.
2015-09-29T15:42:00.033Z,1443541320.033 [CBIT](INFO): Last reboot was NOT due to watchdog timer.
2015-09-29T15:42:00.033Z,1443541320.033 [DepthRateCalculator](DEBUG): Initializing DepthRateCalculator.
2015-09-29T15:42:00.034Z,1443541320.034 [PitchRateCalculator](DEBUG): Initializing PitchRateCalculator.
2015-09-29T15:42:00.034Z,1443541320.034 [SpeedCalculator](DEBUG): Initializing SpeedCalculator.
2015-09-29T15:42:00.034Z,1443541320.034 [TempGradientCalculator](DEBUG): Initializing TempGradientCalculator.
2015-09-29T15:42:00.035Z,1443541320.035 [VerticalTemperatureHomogeneityIndexCalculator](DEBUG): (re)initializing
2015-09-29T15:42:00.036Z,1443541320.036 [YawRateCalculator](DEBUG): Initializing YawRateCalculator.
2015-09-29T15:42:00.036Z,1443541320.036 [DeadReckonUsingMultipleVelocitySources](DEBUG): Initializing DeadReckonUsingMultipleVelocitySources component.
2015-09-29T15:42:00.037Z,1443541320.037 [DeadReckonUsingMultipleVelocitySources](INFO): Will consider orientation measurement stale after 120s.
2015-09-29T15:42:00.037Z,1443541320.037 [DeadReckonUsingMultipleVelocitySources](INFO): Will consider velocity measurement stale after 20s.
2015-09-29T15:42:00.038Z,1443541320.038 [DeadReckonUsingSpeedCalculator](DEBUG): Initializing DeadReckonUsingSpeedCalculator component.
2015-09-29T15:42:00.038Z,1443541320.038 [DeadReckonUsingSpeedCalculator](INFO): Will consider orientation measurement stale after 120s.
2015-09-29T15:42:00.038Z,1443541320.038 [DeadReckonUsingSpeedCalculator](INFO): Will consider velocity measurement stale after 20s.
2015-09-29T15:42:00.039Z,1443541320.039 [NavChart](DEBUG): Initialize NavChart Navigation.
2015-09-29T15:42:00.039Z,1443541320.039 [UniversalFixResidualReporter](DEBUG): Initializing UniversalFixResidualReporter component.
2015-09-29T15:42:00.045Z,1443541320.045 [InternalSim](DEBUG):  InternalSim initializing...
2015-09-29T15:42:00.079Z,1443541320.079 [logger ThreadHandler](INFO): Handler Thread ID is 818
2015-09-29T15:42:00.166Z,1443541320.166 [CTD_NeilBrown ThreadHandler](INFO): Handler Thread ID is 819
2015-09-29T15:42:00.176Z,1443541320.176 [WetLabsBB2FL ThreadHandler](INFO): Handler Thread ID is 820
2015-09-29T15:42:00.215Z,1443541320.215 [Radio_Surface ThreadHandler](INFO): Handler Thread ID is 821
2015-09-29T15:42:00.235Z,1443541320.235 [NavChartDb ThreadHandler](INFO): Handler Thread ID is 822
2015-09-29T15:42:00.237Z,1443541320.237 [MissionManager](INFO): Loading Mission: Missions/Startup.xml
2015-09-29T15:42:00.296Z,1443541320.296 [Startup:A.GoToSurface](DEBUG): Construct GoToSurface.
2015-09-29T15:42:00.306Z,1443541320.306 [MissionManager](DEBUG): 
<?xml version="1.0" encoding="UTF-8"?>
<Mission xmlns="Tethys"
       xmlns:Control="Tethys/Control"
       xmlns:Guidance="Tethys/Guidance" 
       xmlns:Units="Tethys/Units"
       xmlns:Universal="Tethys/Universal"
       xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
       xsi:schemaLocation="Tethys http://okeanids.mbari.org/tethys/Xml/Tethys.xsd
                           Tethys/Control http://okeanids.mbari.org/tethys/Xml/Control.xsd
                           Tethys/Guidance http://okeanids.mbari.org/tethys/Xml/Guidance.xsd
                           Tethys/Units http://okeanids.mbari.org/tethys/Xml/Units.xsd
                           Tethys/Universal http://okeanids.mbari.org/tethys/Xml/Universal.xsd"
       Id="Startup">

    <Guidance:GoToSurface>
        <Progression/>
    </Guidance:GoToSurface>

    <Aggregate Id="StartupSatComms">

        <Sequence/>

        <ReadDatum>
            <Timeout Duration="P1M" />
            <Universal:latitude_fix/>
        </ReadDatum>

        <ReadDatum>
            <Timeout Duration="P1M" />
            <Universal:platform_communications/>
        </ReadDatum>

    </Aggregate>

</Mission>


2015-09-29T15:42:00.321Z,1443541320.321 [NavChartDb](INFO): Looking for Electronic Nav Chart files in directory: Resources
2015-09-29T15:42:00.322Z,1443541320.322 [MissionManager](INFO): Loading Mission: Missions/Default.xml
2015-09-29T15:42:00.323Z,1443541320.323 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US1WC07M.000
2015-09-29T15:42:00.324Z,1443541320.324 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US2WC11M.000
2015-09-29T15:42:00.324Z,1443541320.324 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US3CA52M.000
2015-09-29T15:42:00.324Z,1443541320.324 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US4CA60M.000
2015-09-29T15:42:00.324Z,1443541320.324 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA50M.000
2015-09-29T15:42:00.324Z,1443541320.324 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA61M.000
2015-09-29T15:42:00.325Z,1443541320.325 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA62M.000
2015-09-29T15:42:00.325Z,1443541320.325 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA83M.000
2015-09-29T15:42:00.398Z,1443541320.398 [MissionManager](INFO): DefineArg Default.ElapsedSinceDefaultStarted = 0.000000 min
2015-09-29T15:42:00.399Z,1443541320.399 [Default:A.GoToSurface](DEBUG): Construct GoToSurface.
2015-09-29T15:42:00.429Z,1443541320.429 [Default:CheckIn:Read_Iridium:A_Timeout:A.Execute](DEBUG): Construct Execute.
2015-09-29T15:42:00.432Z,1443541320.432 [Default:CheckIn:C.Wait](DEBUG): Construct Wait.
2015-09-29T15:42:00.446Z,1443541320.446 [Default:D.Execute](DEBUG): Construct Execute.
2015-09-29T15:42:00.449Z,1443541320.449 [MissionManager](DEBUG): 
<?xml version="1.0" encoding="UTF-8"?>
<Mission xmlns="Tethys"
xmlns:Guidance="Tethys/Guidance"
xmlns:Units="Tethys/Units"
xmlns:Universal="Tethys/Universal"
xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
xsi:schemaLocation="Tethys http://okeanids.mbari.org/tethys/Xml/Tethys.xsd
Tethys/Guidance http://okeanids.mbari.org/tethys/Xml/Guidance.xsd
Tethys/Units http://okeanids.mbari.org/tethys/Xml/Units.xsd
Tethys/Universal http://okeanids.mbari.org/tethys/Xml/Universal.xsd"
Id="Default">

    <DefineArg Name="ElapsedSinceDefaultStarted"><Units:minute/><Value>0</Value></DefineArg>

    <Guidance:GoToSurface>
        <Progression/>
    </Guidance:GoToSurface>

    <Aggregate Id="CheckIn">

        <Sequence Repeat="288"/>

        <ReadDatum Id="Read_GPS">
            <Sequence/>
            <Timeout Duration="P5M"/>
            <Universal:time_fix/>
        </ReadDatum>

        <ReadDatum Id="Read_Iridium">
            <Sequence/>
            <Timeout Duration="P2H">
                <Guidance:Execute>
                    <Sequence/>
                    <Setting><Guidance:Execute.command/><String>Burn 300</String></Setting>
                </Guidance:Execute>
                <Syslog Severity="Critical">Dropped weight due to communications timeout.</Syslog>
            </Timeout>
            <Universal:platform_communications/>
        </ReadDatum>

        <Guidance:Wait>
            <Sequence/>
            <Setting><Guidance:Wait.duration/><Units:minute/><Value>5</Value></Setting>
        </Guidance:Wait>

        <Assign><Sequence/><Arg Name="ElapsedSinceDefaultStarted"/><Elapsed><Universal:mission_started/></Elapsed></Assign>

        <Syslog Severity="Important">Default mission has been running for <Arg Name="ElapsedSinceDefaultStarted"/><Units:minute/></Syslog>

    </Aggregate>

    <Syslog Severity="Important">Restarting logs and Default mission.</Syslog>

    <Guidance:Execute>
        <Sequence/>
        <Setting><Guidance:Execute.command/><String>restart logs</String></Setting>
    </Guidance:Execute>

</Mission>


2015-09-29T15:42:00.473Z,1443541320.473 [controlThread](DEBUG): Component order: CycleStarter,InternalSim,ISUS,PAR_Licor,AHRS_sp3003D,DataOverHttps,Depth_Keller,DropWeight,DVL_micro,NAL9602,Onboard,DAT,SCPI,PAR_Licor,Depth_Keller,DepthRateCalculator,PitchRateCalculator,SpeedCalculator,TempGradientCalculator,VerticalTemperatureHomogeneityIndexCalculator,YawRateCalculator,StratificationFrontDetector,DeadReckonUsingMultipleVelocitySources,DeadReckonUsingSpeedCalculator,NavChart,UniversalFixResidualReporter,MissionManager,VerticalControl,HorizontalControl,SpeedControl,LoopControl,BuoyancyServo,ElevatorServo,MassServo,RudderServo,ThrusterServo,SBIT,IBIT,CBIT,Reporter,LogSplitter,
2015-09-29T15:42:00.750Z,1443541320.750 [DVL_micro](INFO): Initializing
2015-09-29T15:42:00.921Z,1443541320.921 [DeadReckonUsingMultipleVelocitySources](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T15:42:00.945Z,1443541320.945 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T15:42:01.055Z,1443541321.055 [BuoyancyServo](DEBUG): Initializing BuoyancyServo.
2015-09-29T15:42:01.065Z,1443541321.065 [ElevatorServo](DEBUG): Initializing ElevatorServo.
2015-09-29T15:42:01.087Z,1443541321.087 [MassServo](DEBUG): Initializing MassServo.
2015-09-29T15:42:01.111Z,1443541321.111 [RudderServo](DEBUG): Initializing RudderServo.
2015-09-29T15:42:01.120Z,1443541321.120 [ThrusterServo](DEBUG): Initializing ThrusterServo.
2015-09-29T15:42:01.410Z,1443541321.410 [DeadReckonUsingMultipleVelocitySources](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T15:42:01.411Z,1443541321.411 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T15:42:10.481Z,1443541330.481 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T15:42:10.823Z,1443541330.823 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T15:42:10.962Z,1443541330.962 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T15:42:11.354Z,1443541331.354 [DataOverHttps](INFO): setting available, lastComms_.elapsed()=0.003000
2015-09-29T15:42:11.357Z,1443541331.357 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T15:42:11.752Z,1443541331.752 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T15:42:12.153Z,1443541332.153 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T15:42:12.552Z,1443541332.552 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T15:42:12.953Z,1443541332.953 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T15:42:13.351Z,1443541333.351 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T15:42:13.752Z,1443541333.752 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T15:42:14.151Z,1443541334.151 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T15:42:14.556Z,1443541334.556 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T15:42:14.953Z,1443541334.953 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T15:42:15.353Z,1443541335.353 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T15:42:15.752Z,1443541335.752 [NAL9602](INFO): No messages in MT queue
2015-09-29T15:42:15.753Z,1443541335.753 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T15:42:16.153Z,1443541336.153 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T15:42:16.553Z,1443541336.553 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T15:42:16.953Z,1443541336.953 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T15:42:17.353Z,1443541337.353 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T15:42:17.764Z,1443541337.764 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T15:42:18.152Z,1443541338.152 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T15:42:18.553Z,1443541338.553 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T15:42:18.953Z,1443541338.953 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T15:42:19.354Z,1443541339.354 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T15:42:19.752Z,1443541339.752 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T15:42:20.152Z,1443541340.152 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T15:42:20.552Z,1443541340.552 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T15:42:20.566Z,1443541340.566 [SBIT](IMPORTANT): Beginning Startup BIT
2015-09-29T15:42:20.954Z,1443541340.954 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T15:42:21.362Z,1443541341.362 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T15:42:21.754Z,1443541341.754 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T15:42:22.158Z,1443541342.158 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T15:42:22.552Z,1443541342.552 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T15:42:22.952Z,1443541342.952 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T15:42:23.352Z,1443541343.352 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T15:42:23.752Z,1443541343.752 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T15:42:24.152Z,1443541344.152 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T15:42:24.551Z,1443541344.551 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T15:42:24.951Z,1443541344.951 [D