2015-09-29T15:34:01.165Z,1443540841.165 [Supervisor](DEBUG): Initializing supervisor.
2015-09-29T15:34:01.168Z,1443540841.168 [SyncHandler](DEBUG): Created PCaller Thread at 4034C4E0
2015-09-29T15:34:01.169Z,1443540841.169 [SyncHandler](INFO): Protected caller Thread ID is 761
2015-09-29T15:34:01.169Z,1443540841.169 [ComponentRegistry](DEBUG): Component "controlThread" handled in its own thread.
2015-09-29T15:34:01.172Z,1443540841.172 [controlThread ThreadHandler](DEBUG): Created PCaller Thread at 4037C4E0
2015-09-29T15:34:01.172Z,1443540841.172 [controlThread ThreadHandler](INFO): Protected caller Thread ID is 762
2015-09-29T15:34:01.175Z,1443540841.175 [ComponentRegistry](DEBUG): SyncComponent "CycleStarter" handled in the control thread.
2015-09-29T15:34:01.188Z,1443540841.188 [ComponentRegistry](DEBUG): Component "CommandLine" handled in its own thread.
2015-09-29T15:34:01.192Z,1443540841.192 [CommandLine ThreadHandler](DEBUG): Created PCaller Thread at 403AC4E0
2015-09-29T15:34:01.192Z,1443540841.192 [CommandLine ThreadHandler](INFO): Protected caller Thread ID is 763
2015-09-29T15:34:01.193Z,1443540841.193 [ComponentRegistry](DEBUG): Component "logger" handled in its own thread.
2015-09-29T15:34:01.196Z,1443540841.196 [logger ThreadHandler](DEBUG): Created PCaller Thread at 403DC4E0
2015-09-29T15:34:01.196Z,1443540841.196 [logger ThreadHandler](INFO): Protected caller Thread ID is 764
2015-09-29T15:34:01.199Z,1443540841.199 [ComponentRegistry](DEBUG): SyncComponent "LogSplitter" handled in the control thread.
2015-09-29T15:34:01.199Z,1443540841.199 [Supervisor](INFO): Looking for Config files in directory: Config/
2015-09-29T15:34:01.203Z,1443540841.203 [Supervisor](INFO): Opening Config file at: Config/Control.cfg
2015-09-29T15:34:01.599Z,1443540841.599 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Control
2015-09-29T15:34:01.601Z,1443540841.601 [Supervisor](INFO): Opening Config file at: Config/BIT.cfg
2015-09-29T15:34:01.791Z,1443540841.791 [ComponentRegistry](DEBUG): Loaded Config Component "Config/BIT
2015-09-29T15:34:01.793Z,1443540841.793 [Supervisor](INFO): Opening Config file at: Config/Derivation.cfg
2015-09-29T15:34:01.937Z,1443540841.937 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Derivation
2015-09-29T15:34:01.937Z,1443540841.937 [Supervisor](INFO): Opening Config file at: Config/Estimation.cfg
2015-09-29T15:34:02.085Z,1443540842.085 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Estimation
2015-09-29T15:34:02.085Z,1443540842.085 [Supervisor](INFO): Opening Config file at: Config/Guidance.cfg
2015-09-29T15:34:02.180Z,1443540842.180 [Supervisor](INFO): Opening Config file at: Config/Navigation.cfg
2015-09-29T15:34:02.401Z,1443540842.401 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Navigation
2015-09-29T15:34:02.402Z,1443540842.402 [Supervisor](INFO): Opening Config file at: Config/Sample.cfg
2015-09-29T15:34:02.497Z,1443540842.497 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Sample
2015-09-29T15:34:02.498Z,1443540842.498 [Supervisor](INFO): Opening Config file at: Config/Science.cfg
2015-09-29T15:34:02.813Z,1443540842.813 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Science
2015-09-29T15:34:02.814Z,1443540842.814 [Supervisor](INFO): Opening Config file at: Config/Sensor.cfg
2015-09-29T15:34:03.209Z,1443540843.209 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Sensor
2015-09-29T15:34:03.210Z,1443540843.210 [Supervisor](INFO): Opening Config file at: Config/Servo.cfg
2015-09-29T15:34:03.565Z,1443540843.565 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Servo
2015-09-29T15:34:03.567Z,1443540843.567 [Supervisor](INFO): Opening Config file at: Config/Simulator.cfg
2015-09-29T15:34:04.166Z,1443540844.166 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Simulator
2015-09-29T15:34:04.167Z,1443540844.167 [Supervisor](INFO): Opening Config file at: Config/logger.cfg
2015-09-29T15:34:04.397Z,1443540844.397 [ComponentRegistry](DEBUG): Loaded Config Component "Config/logger
2015-09-29T15:34:04.398Z,1443540844.398 [Supervisor](INFO): Opening Config file at: Config/secure.cfg
2015-09-29T15:34:04.509Z,1443540844.509 [ComponentRegistry](DEBUG): Loaded Config Component "Config/secure
2015-09-29T15:34:04.510Z,1443540844.510 [Supervisor](INFO): Opening Config file at: Config/vehicle.cfg
2015-09-29T15:34:05.028Z,1443540845.028 [ComponentRegistry](DEBUG): Loaded Config Component "Config/vehicle
2015-09-29T15:34:05.029Z,1443540845.029 [Supervisor](INFO): Opening Config file at: Config/workSite.cfg
2015-09-29T15:34:05.173Z,1443540845.173 [ComponentRegistry](DEBUG): Loaded Config Component "Config/workSite
2015-09-29T15:34:05.175Z,1443540845.175 [Supervisor](INFO): Looking for Config files in directory: Config/(none)/
2015-09-29T15:34:05.175Z,1443540845.175 [Supervisor](FAULT): Ignoring configuration overrides from Data/persisted.cfg
2015-09-29T15:34:05.180Z,1443540845.180 [Module Loader](DEBUG): Loading Module at Modules/Control.so
2015-09-29T15:34:05.257Z,1443540845.257 [VerticalControl](DEBUG): Construct VerticalControl.
2015-09-29T15:34:05.399Z,1443540845.399 [VerticalControl] Loaded
2015-09-29T15:34:05.399Z,1443540845.399 [ComponentRegistry](DEBUG): SyncComponent "VerticalControl" handled in the control thread.
2015-09-29T15:34:05.400Z,1443540845.400 [HorizontalControl](DEBUG): Construct HorizontalControl.
2015-09-29T15:34:05.483Z,1443540845.483 [HorizontalControl] Loaded
2015-09-29T15:34:05.483Z,1443540845.483 [ComponentRegistry](DEBUG): SyncComponent "HorizontalControl" handled in the control thread.
2015-09-29T15:34:05.484Z,1443540845.484 [SpeedControl](DEBUG): Construct SpeedControl.
2015-09-29T15:34:05.490Z,1443540845.490 [SpeedControl] Loaded
2015-09-29T15:34:05.490Z,1443540845.490 [ComponentRegistry](DEBUG): SyncComponent "SpeedControl" handled in the control thread.
2015-09-29T15:34:05.491Z,1443540845.491 [LoopControl](DEBUG): Construct LoopControl.
2015-09-29T15:34:05.491Z,1443540845.491 [LoopControl] Loaded
2015-09-29T15:34:05.492Z,1443540845.492 [ComponentRegistry](DEBUG): SyncComponent "LoopControl" handled in the control thread.
2015-09-29T15:34:05.496Z,1443540845.496 [Module Loader](DEBUG): Loaded Module: Control (Contains the Control components, such as Depth, Heading, and Speed Control)
2015-09-29T15:34:05.497Z,1443540845.497 [Module Loader](DEBUG): Loading Module at Modules/BIT.so
2015-09-29T15:34:05.660Z,1443540845.660 [SBIT](DEBUG): Construct Startup Built In Test.
2015-09-29T15:34:05.677Z,1443540845.677 [SBIT] Loaded
2015-09-29T15:34:05.677Z,1443540845.677 [ComponentRegistry](DEBUG): SyncComponent "SBIT" handled in the control thread.
2015-09-29T15:34:05.678Z,1443540845.678 [IBIT](DEBUG): Construct Initiated Built In Test.
2015-09-29T15:34:05.712Z,1443540845.712 [IBIT] Loaded
2015-09-29T15:34:05.713Z,1443540845.713 [ComponentRegistry](DEBUG): SyncComponent "IBIT" handled in the control thread.
2015-09-29T15:34:05.715Z,1443540845.715 [CBIT](DEBUG): Construct Continuous Built In Test.
2015-09-29T15:34:05.872Z,1443540845.872 [CBIT] Loaded
2015-09-29T15:34:05.873Z,1443540845.873 [ComponentRegistry](DEBUG): SyncComponent "CBIT" handled in the control thread.
2015-09-29T15:34:05.873Z,1443540845.873 [Module Loader](DEBUG): Loaded Module: BIT (Contains the BuiltInTest components, such as C Built In Test)
2015-09-29T15:34:05.874Z,1443540845.874 [Module Loader](DEBUG): Loading Module at Modules/Derivation.so
2015-09-29T15:34:05.916Z,1443540845.916 [DepthRateCalculator] Loaded
2015-09-29T15:34:05.916Z,1443540845.916 [ComponentRegistry](DEBUG): SyncComponent "DepthRateCalculator" handled in the control thread.
2015-09-29T15:34:05.922Z,1443540845.922 [PitchRateCalculator] Loaded
2015-09-29T15:34:05.922Z,1443540845.922 [ComponentRegistry](DEBUG): SyncComponent "PitchRateCalculator" handled in the control thread.
2015-09-29T15:34:05.934Z,1443540845.934 [SpeedCalculator] Loaded
2015-09-29T15:34:05.934Z,1443540845.934 [ComponentRegistry](DEBUG): SyncComponent "SpeedCalculator" handled in the control thread.
2015-09-29T15:34:05.956Z,1443540845.956 [TempGradientCalculator] Loaded
2015-09-29T15:34:05.957Z,1443540845.957 [ComponentRegistry](DEBUG): SyncComponent "TempGradientCalculator" handled in the control thread.
2015-09-29T15:34:05.974Z,1443540845.974 [VerticalTemperatureHomogeneityIndexCalculator] Loaded
2015-09-29T15:34:05.974Z,1443540845.974 [ComponentRegistry](DEBUG): SyncComponent "VerticalTemperatureHomogeneityIndexCalculator" handled in the control thread.
2015-09-29T15:34:05.980Z,1443540845.980 [YawRateCalculator] Loaded
2015-09-29T15:34:05.980Z,1443540845.980 [ComponentRegistry](DEBUG): SyncComponent "YawRateCalculator" handled in the control thread.
2015-09-29T15:34:05.981Z,1443540845.981 [Module Loader](DEBUG): Loaded Module: Derivation (Contains the base derivation components)
2015-09-29T15:34:05.981Z,1443540845.981 [Module Loader](DEBUG): Loading Module at Modules/Estimation.so
2015-09-29T15:34:06.107Z,1443540846.107 [StratificationFrontDetector](INFO): threshold set to: 0.399988 degC
2015-09-29T15:34:06.107Z,1443540846.107 [StratificationFrontDetector](DEBUG): (re)initializing
2015-09-29T15:34:06.108Z,1443540846.108 [StratificationFrontDetector] Loaded
2015-09-29T15:34:06.108Z,1443540846.108 [ComponentRegistry](DEBUG): SyncComponent "StratificationFrontDetector" handled in the control thread.
2015-09-29T15:34:06.108Z,1443540846.108 [Module Loader](DEBUG): Loaded Module: Estimation (Contains the base estimation components)
2015-09-29T15:34:06.109Z,1443540846.109 [Module Loader](DEBUG): Loading Module at Modules/Guidance.so
2015-09-29T15:34:06.409Z,1443540846.409 [Module Loader](DEBUG): Loaded Module: Guidance (Contains behaviors and commands)
2015-09-29T15:34:06.409Z,1443540846.409 [Module Loader](DEBUG): Loading Module at Modules/Navigation.so
2015-09-29T15:34:06.545Z,1443540846.545 [DeadReckonUsingMultipleVelocitySources] Loaded
2015-09-29T15:34:06.545Z,1443540846.545 [ComponentRegistry](DEBUG): SyncComponent "DeadReckonUsingMultipleVelocitySources" handled in the control thread.
2015-09-29T15:34:06.607Z,1443540846.607 [DeadReckonUsingSpeedCalculator] Loaded
2015-09-29T15:34:06.607Z,1443540846.607 [ComponentRegistry](DEBUG): SyncComponent "DeadReckonUsingSpeedCalculator" handled in the control thread.
2015-09-29T15:34:06.629Z,1443540846.629 [NavChart] Loaded
2015-09-29T15:34:06.630Z,1443540846.630 [ComponentRegistry](DEBUG): SyncComponent "NavChart" handled in the control thread.
2015-09-29T15:34:06.635Z,1443540846.635 [UniversalFixResidualReporter] Loaded
2015-09-29T15:34:06.635Z,1443540846.635 [ComponentRegistry](DEBUG): SyncComponent "UniversalFixResidualReporter" handled in the control thread.
2015-09-29T15:34:06.636Z,1443540846.636 [Module Loader](DEBUG): Loaded Module: Navigation (Contains the base navigation components)
2015-09-29T15:34:06.636Z,1443540846.636 [Module Loader](DEBUG): Loading Module at Modules/Sample.so
2015-09-29T15:34:06.645Z,1443540846.645 [Module Loader](DEBUG): Loaded Module: Sample (This is a Sample Module of Sample Components)
2015-09-29T15:34:06.646Z,1443540846.646 [Module Loader](DEBUG): Loading Module at Modules/Science.so
2015-09-29T15:34:06.943Z,1443540846.943 [CTD_NeilBrown] Loaded
2015-09-29T15:34:06.943Z,1443540846.943 [ComponentRegistry](DEBUG): Component "CTD_NeilBrown" handled in its own thread.
2015-09-29T15:34:06.952Z,1443540846.952 [CTD_NeilBrown ThreadHandler](DEBUG): Created PCaller Thread at 4059D4E0
2015-09-29T15:34:06.953Z,1443540846.953 [CTD_NeilBrown ThreadHandler](INFO): Protected caller Thread ID is 810
2015-09-29T15:34:06.966Z,1443540846.966 [ISUS] Loaded
2015-09-29T15:34:06.966Z,1443540846.966 [ComponentRegistry](DEBUG): SyncComponent "ISUS" handled in the control thread.
2015-09-29T15:34:06.985Z,1443540846.985 [PAR_Licor] Loaded
2015-09-29T15:34:06.986Z,1443540846.986 [ComponentRegistry](DEBUG): SyncComponent "PAR_Licor" handled in the control thread.
2015-09-29T15:34:07.043Z,1443540847.043 [WetLabsBB2FL] Loaded
2015-09-29T15:34:07.043Z,1443540847.043 [ComponentRegistry](DEBUG): Component "WetLabsBB2FL" handled in its own thread.
2015-09-29T15:34:07.048Z,1443540847.048 [WetLabsBB2FL ThreadHandler](DEBUG): Created PCaller Thread at 405CD4E0
2015-09-29T15:34:07.048Z,1443540847.048 [WetLabsBB2FL ThreadHandler](INFO): Protected caller Thread ID is 811
2015-09-29T15:34:07.049Z,1443540847.049 [Module Loader](DEBUG): Loaded Module: Science (Contains the science components)
2015-09-29T15:34:07.050Z,1443540847.050 [Module Loader](DEBUG): Loading Module at Modules/Sensor.so
2015-09-29T15:34:07.786Z,1443540847.786 [AHRS_sp3003D] Loaded
2015-09-29T15:34:07.786Z,1443540847.786 [ComponentRegistry](DEBUG): SyncComponent "AHRS_sp3003D" handled in the control thread.
2015-09-29T15:34:07.978Z,1443540847.978 [DataOverHttps] Loaded
2015-09-29T15:34:07.978Z,1443540847.978 [ComponentRegistry](DEBUG): SyncComponent "DataOverHttps" handled in the control thread.
2015-09-29T15:34:07.996Z,1443540847.996 [Depth_Keller] Loaded
2015-09-29T15:34:07.996Z,1443540847.996 [ComponentRegistry](DEBUG): SyncComponent "Depth_Keller" handled in the control thread.
2015-09-29T15:34:08.002Z,1443540848.002 [DropWeight] Loaded
2015-09-29T15:34:08.002Z,1443540848.002 [ComponentRegistry](DEBUG): SyncComponent "DropWeight" handled in the control thread.
2015-09-29T15:34:08.157Z,1443540848.157 [DVL_micro] Loaded
2015-09-29T15:34:08.157Z,1443540848.157 [ComponentRegistry](DEBUG): SyncComponent "DVL_micro" handled in the control thread.
2015-09-29T15:34:08.267Z,1443540848.267 [NAL9602] Loaded
2015-09-29T15:34:08.268Z,1443540848.268 [ComponentRegistry](DEBUG): SyncComponent "NAL9602" handled in the control thread.
2015-09-29T15:34:08.316Z,1443540848.316 [Onboard] Loaded
2015-09-29T15:34:08.316Z,1443540848.316 [ComponentRegistry](DEBUG): SyncComponent "Onboard" handled in the control thread.
2015-09-29T15:34:08.332Z,1443540848.332 [Radio_Surface] Loaded
2015-09-29T15:34:08.332Z,1443540848.332 [ComponentRegistry](DEBUG): Component "Radio_Surface" handled in its own thread.
2015-09-29T15:34:08.336Z,1443540848.336 [Radio_Surface ThreadHandler](DEBUG): Created PCaller Thread at 408114E0
2015-09-29T15:34:08.336Z,1443540848.336 [Radio_Surface ThreadHandler](INFO): Protected caller Thread ID is 812
2015-09-29T15:34:08.500Z,1443540848.500 [DAT] Loaded
2015-09-29T15:34:08.500Z,1443540848.500 [ComponentRegistry](DEBUG): SyncComponent "DAT" handled in the control thread.
2015-09-29T15:34:08.507Z,1443540848.507 [SCPI] Loaded
2015-09-29T15:34:08.507Z,1443540848.507 [ComponentRegistry](DEBUG): SyncComponent "SCPI" handled in the control thread.
2015-09-29T15:34:08.508Z,1443540848.508 [Module Loader](DEBUG): Loaded Module: Sensor (Contains the sensor components)
2015-09-29T15:34:08.509Z,1443540848.509 [Module Loader](DEBUG): Loading Module at Modules/Servo.so
2015-09-29T15:34:08.650Z,1443540848.650 [BuoyancyServo] Loaded
2015-09-29T15:34:08.650Z,1443540848.650 [ComponentRegistry](DEBUG): SyncComponent "BuoyancyServo" handled in the control thread.
2015-09-29T15:34:08.663Z,1443540848.663 [ElevatorServo] Loaded
2015-09-29T15:34:08.664Z,1443540848.664 [ComponentRegistry](DEBUG): SyncComponent "ElevatorServo" handled in the control thread.
2015-09-29T15:34:08.676Z,1443540848.676 [MassServo] Loaded
2015-09-29T15:34:08.676Z,1443540848.676 [ComponentRegistry](DEBUG): SyncComponent "MassServo" handled in the control thread.
2015-09-29T15:34:08.693Z,1443540848.693 [RudderServo] Loaded
2015-09-29T15:34:08.693Z,1443540848.693 [ComponentRegistry](DEBUG): SyncComponent "RudderServo" handled in the control thread.
2015-09-29T15:34:08.704Z,1443540848.704 [ThrusterServo] Loaded
2015-09-29T15:34:08.705Z,1443540848.705 [ComponentRegistry](DEBUG): SyncComponent "ThrusterServo" handled in the control thread.
2015-09-29T15:34:08.705Z,1443540848.705 [Module Loader](DEBUG): Loaded Module: Servo (This is the module containing motor controllers)
2015-09-29T15:34:08.706Z,1443540848.706 [Module Loader](DEBUG): Loading Module at Modules/Simulator.so
2015-09-29T15:34:08.913Z,1443540848.913 [InternalSim] Loaded
2015-09-29T15:34:08.913Z,1443540848.913 [ComponentRegistry](DEBUG): SyncComponent "InternalSim" handled in the control thread.
2015-09-29T15:34:08.913Z,1443540848.913 [Module Loader](DEBUG): Loaded Module: Simulator (This is the module containing the Simulator)
2015-09-29T15:34:08.914Z,1443540848.914 [Module Loader](DEBUG): Loading Module at Modules/Trigger.so
2015-09-29T15:34:08.962Z,1443540848.962 [Module Loader](DEBUG): Loaded Module: Trigger (Contains triggers for use in missions)
2015-09-29T15:34:08.966Z,1443540848.966 [ComponentRegistry](DEBUG): SyncComponent "MissionManager" handled in the control thread.
2015-09-29T15:34:08.967Z,1443540848.967 [ComponentRegistry](DEBUG): SyncComponent "Reporter" handled in the control thread.
2015-09-29T15:34:08.974Z,1443540848.974 [ComponentRegistry](DEBUG): Component "NavChartDb" handled in its own thread.
2015-09-29T15:34:08.976Z,1443540848.976 [NavChartDb ThreadHandler](DEBUG): Created PCaller Thread at 408BF4E0
2015-09-29T15:34:08.976Z,1443540848.976 [NavChartDb ThreadHandler](INFO): Protected caller Thread ID is 813
2015-09-29T15:34:08.981Z,1443540848.981 [Supervisor](INFO): Main Thread ID is 760
2015-09-29T15:34:08.981Z,1443540848.981 [Supervisor](DEBUG): Running supervisor.
2015-09-29T15:34:08.982Z,1443540848.982 [CommandLine ThreadHandler](INFO): Handler Thread ID is 814
2015-09-29T15:34:08.988Z,1443540848.988 [controlThread ThreadHandler](INFO): Handler Thread ID is 815
2015-09-29T15:34:08.989Z,1443540848.989 [controlThread](DEBUG): Initializing ControlThread
2015-09-29T15:34:08.990Z,1443540848.990 [VerticalControl](DEBUG): Initialize VerticalControlComponent.
2015-09-29T15:34:08.992Z,1443540848.992 [HorizontalControl](DEBUG): Initialize HorizontalControlComponent.
2015-09-29T15:34:08.992Z,1443540848.992 [SpeedControl](DEBUG): Initialize SpeedControlComponent.
2015-09-29T15:34:08.993Z,1443540848.993 [LoopControl](DEBUG): Initialize LoopControlComponent.
2015-09-29T15:34:08.993Z,1443540848.993 [SBIT](INFO): Initialize SBIT Component.
2015-09-29T15:34:08.994Z,1443540848.994 [SBIT](IMPORTANT): Tethys CM Info: SVN revision:12634
2015-09-29T15:34:08.995Z,1443540848.995 [SBIT](INFO): Kernel Reporting Different Release From Configuration.
Kernel Expected: 2.6.32-45-generic-pae
Kernel Reported: 2.6.27.8
2015-09-29T15:34:08.996Z,1443540848.996 [SBIT](INFO): Kernel Reporting Different Version From Configuration.
Kernel Expected: #102-Ubuntu SMP Wed Jan 2 22:10:16 UTC 2013
Kernel Reported: #641 PREEMPT Mon Sep 28 16:45:10 PDT 2015
2015-09-29T15:34:08.997Z,1443540848.997 [SBIT](INFO): Beginning SBIT in 20.000000 seconds.
2015-09-29T15:34:08.997Z,1443540848.997 [IBIT](INFO): Initialize IBIT Component.
2015-09-29T15:34:08.998Z,1443540848.998 [CBIT](DEBUG): Initialize CBIT Component.
2015-09-29T15:34:08.998Z,1443540848.998 [CBIT](FAULT): LAST RESTART WAS UNINTENTIONAL.
2015-09-29T15:34:08.998Z,1443540848.998 [CBIT](INFO): Last reboot was NOT due to watchdog timer.
2015-09-29T15:34:08.999Z,1443540848.999 [DepthRateCalculator](DEBUG): Initializing DepthRateCalculator.
2015-09-29T15:34:08.999Z,1443540848.999 [PitchRateCalculator](DEBUG): Initializing PitchRateCalculator.
2015-09-29T15:34:08.999Z,1443540848.999 [SpeedCalculator](DEBUG): Initializing SpeedCalculator.
2015-09-29T15:34:08.999Z,1443540848.999 [TempGradientCalculator](DEBUG): Initializing TempGradientCalculator.
2015-09-29T15:34:09.000Z,1443540849.000 [VerticalTemperatureHomogeneityIndexCalculator](DEBUG): (re)initializing
2015-09-29T15:34:09.001Z,1443540849.001 [YawRateCalculator](DEBUG): Initializing YawRateCalculator.
2015-09-29T15:34:09.001Z,1443540849.001 [DeadReckonUsingMultipleVelocitySources](DEBUG): Initializing DeadReckonUsingMultipleVelocitySources component.
2015-09-29T15:34:09.002Z,1443540849.002 [DeadReckonUsingMultipleVelocitySources](INFO): Will consider orientation measurement stale after 120s.
2015-09-29T15:34:09.002Z,1443540849.002 [DeadReckonUsingMultipleVelocitySources](INFO): Will consider velocity measurement stale after 20s.
2015-09-29T15:34:09.003Z,1443540849.003 [DeadReckonUsingSpeedCalculator](DEBUG): Initializing DeadReckonUsingSpeedCalculator component.
2015-09-29T15:34:09.003Z,1443540849.003 [DeadReckonUsingSpeedCalculator](INFO): Will consider orientation measurement stale after 120s.
2015-09-29T15:34:09.003Z,1443540849.003 [DeadReckonUsingSpeedCalculator](INFO): Will consider velocity measurement stale after 20s.
2015-09-29T15:34:09.004Z,1443540849.004 [NavChart](DEBUG): Initialize NavChart Navigation.
2015-09-29T15:34:09.004Z,1443540849.004 [UniversalFixResidualReporter](DEBUG): Initializing UniversalFixResidualReporter component.
2015-09-29T15:34:09.009Z,1443540849.009 [InternalSim](DEBUG):  InternalSim initializing...
2015-09-29T15:34:09.045Z,1443540849.045 [logger ThreadHandler](INFO): Handler Thread ID is 816
2015-09-29T15:34:09.094Z,1443540849.094 [CTD_NeilBrown ThreadHandler](INFO): Handler Thread ID is 817
2015-09-29T15:34:09.100Z,1443540849.100 [WetLabsBB2FL ThreadHandler](INFO): Handler Thread ID is 818
2015-09-29T15:34:09.112Z,1443540849.112 [Radio_Surface ThreadHandler](INFO): Handler Thread ID is 819
2015-09-29T15:34:09.192Z,1443540849.192 [NavChartDb ThreadHandler](INFO): Handler Thread ID is 820
2015-09-29T15:34:09.201Z,1443540849.201 [MissionManager](INFO): Loading Mission: Missions/Startup.xml
2015-09-29T15:34:09.225Z,1443540849.225 [NavChartDb](INFO): Looking for Electronic Nav Chart files in directory: Resources
2015-09-29T15:34:09.229Z,1443540849.229 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US1WC07M.000
2015-09-29T15:34:09.230Z,1443540849.230 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US2WC11M.000
2015-09-29T15:34:09.230Z,1443540849.230 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US3CA52M.000
2015-09-29T15:34:09.230Z,1443540849.230 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US4CA60M.000
2015-09-29T15:34:09.230Z,1443540849.230 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA50M.000
2015-09-29T15:34:09.231Z,1443540849.231 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA61M.000
2015-09-29T15:34:09.231Z,1443540849.231 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA62M.000
2015-09-29T15:34:09.231Z,1443540849.231 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA83M.000
2015-09-29T15:34:09.284Z,1443540849.284 [Startup:A.GoToSurface](DEBUG): Construct GoToSurface.
2015-09-29T15:34:09.316Z,1443540849.316 [MissionManager](DEBUG): 
<?xml version="1.0" encoding="UTF-8"?>
<Mission xmlns="Tethys"
       xmlns:Control="Tethys/Control"
       xmlns:Guidance="Tethys/Guidance" 
       xmlns:Units="Tethys/Units"
       xmlns:Universal="Tethys/Universal"
       xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
       xsi:schemaLocation="Tethys http://okeanids.mbari.org/tethys/Xml/Tethys.xsd
                           Tethys/Control http://okeanids.mbari.org/tethys/Xml/Control.xsd
                           Tethys/Guidance http://okeanids.mbari.org/tethys/Xml/Guidance.xsd
                           Tethys/Units http://okeanids.mbari.org/tethys/Xml/Units.xsd
                           Tethys/Universal http://okeanids.mbari.org/tethys/Xml/Universal.xsd"
       Id="Startup">

    <Guidance:GoToSurface>
        <Progression/>
    </Guidance:GoToSurface>

    <Aggregate Id="StartupSatComms">

        <Sequence/>

        <ReadDatum>
            <Timeout Duration="P1M" />
            <Universal:latitude_fix/>
        </ReadDatum>

        <ReadDatum>
            <Timeout Duration="P1M" />
            <Universal:platform_communications/>
        </ReadDatum>

    </Aggregate>

</Mission>


2015-09-29T15:34:09.317Z,1443540849.317 [MissionManager](INFO): Loading Mission: Missions/Default.xml
2015-09-29T15:34:09.384Z,1443540849.384 [MissionManager](INFO): DefineArg Default.ElapsedSinceDefaultStarted = 0.000000 min
2015-09-29T15:34:09.393Z,1443540849.393 [Default:A.GoToSurface](DEBUG): Construct GoToSurface.
2015-09-29T15:34:09.428Z,1443540849.428 [Default:CheckIn:Read_Iridium:A_Timeout:A.Execute](DEBUG): Construct Execute.
2015-09-29T15:34:09.431Z,1443540849.431 [Default:CheckIn:C.Wait](DEBUG): Construct Wait.
2015-09-29T15:34:09.453Z,1443540849.453 [Default:D.Execute](DEBUG): Construct Execute.
2015-09-29T15:34:09.477Z,1443540849.477 [MissionManager](DEBUG): 
<?xml version="1.0" encoding="UTF-8"?>
<Mission xmlns="Tethys"
xmlns:Guidance="Tethys/Guidance"
xmlns:Units="Tethys/Units"
xmlns:Universal="Tethys/Universal"
xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
xsi:schemaLocation="Tethys http://okeanids.mbari.org/tethys/Xml/Tethys.xsd
Tethys/Guidance http://okeanids.mbari.org/tethys/Xml/Guidance.xsd
Tethys/Units http://okeanids.mbari.org/tethys/Xml/Units.xsd
Tethys/Universal http://okeanids.mbari.org/tethys/Xml/Universal.xsd"
Id="Default">

    <DefineArg Name="ElapsedSinceDefaultStarted"><Units:minute/><Value>0</Value></DefineArg>

    <Guidance:GoToSurface>
        <Progression/>
    </Guidance:GoToSurface>

    <Aggregate Id="CheckIn">

        <Sequence Repeat="288"/>

        <ReadDatum Id="Read_GPS">
            <Sequence/>
            <Timeout Duration="P5M"/>
            <Universal:time_fix/>
        </ReadDatum>

        <ReadDatum Id="Read_Iridium">
            <Sequence/>
            <Timeout Duration="P2H">
                <Guidance:Execute>
                    <Sequence/>
                    <Setting><Guidance:Execute.command/><String>Burn 300</String></Setting>
                </Guidance:Execute>
                <Syslog Severity="Critical">Dropped weight due to communications timeout.</Syslog>
            </Timeout>
            <Universal:platform_communications/>
        </ReadDatum>

        <Guidance:Wait>
            <Sequence/>
            <Setting><Guidance:Wait.duration/><Units:minute/><Value>5</Value></Setting>
        </Guidance:Wait>

        <Assign><Sequence/><Arg Name="ElapsedSinceDefaultStarted"/><Elapsed><Universal:mission_started/></Elapsed></Assign>

        <Syslog Severity="Important">Default mission has been running for <Arg Name="ElapsedSinceDefaultStarted"/><Units:minute/></Syslog>

    </Aggregate>

    <Syslog Severity="Important">Restarting logs and Default mission.</Syslog>

    <Guidance:Execute>
        <Sequence/>
        <Setting><Guidance:Execute.command/><String>restart logs</String></Setting>
    </Guidance:Execute>

</Mission>


2015-09-29T15:34:09.483Z,1443540849.483 [controlThread](DEBUG): Component order: CycleStarter,InternalSim,ISUS,PAR_Licor,AHRS_sp3003D,DataOverHttps,Depth_Keller,DropWeight,DVL_micro,NAL9602,Onboard,DAT,SCPI,PAR_Licor,Depth_Keller,DepthRateCalculator,PitchRateCalculator,SpeedCalculator,TempGradientCalculator,VerticalTemperatureHomogeneityIndexCalculator,YawRateCalculator,StratificationFrontDetector,DeadReckonUsingMultipleVelocitySources,DeadReckonUsingSpeedCalculator,NavChart,UniversalFixResidualReporter,MissionManager,VerticalControl,HorizontalControl,SpeedControl,LoopControl,BuoyancyServo,ElevatorServo,MassServo,RudderServo,ThrusterServo,SBIT,IBIT,CBIT,Reporter,LogSplitter,
2015-09-29T15:34:09.745Z,1443540849.745 [DVL_micro](INFO): Initializing
2015-09-29T15:34:09.913Z,1443540849.913 [DeadReckonUsingMultipleVelocitySources](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T15:34:09.940Z,1443540849.940 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T15:34:10.063Z,1443540850.063 [BuoyancyServo](DEBUG): Initializing BuoyancyServo.
2015-09-29T15:34:10.084Z,1443540850.084 [ElevatorServo](DEBUG): Initializing ElevatorServo.
2015-09-29T15:34:10.104Z,1443540850.104 [MassServo](DEBUG): Initializing MassServo.
2015-09-29T15:34:10.109Z,1443540850.109 [RudderServo](DEBUG): Initializing RudderServo.
2015-09-29T15:34:10.124Z,1443540850.124 [ThrusterServo](DEBUG): Initializing ThrusterServo.
2015-09-29T15:34:10.378Z,1443540850.378 [DeadReckonUsingMultipleVelocitySources](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T15:34:10.379Z,1443540850.379 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T15:34:19.376Z,1443540859.376 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T15:34:19.711Z,1443540859.711 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T15:34:19.843Z,1443540859.843 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T15:34:20.242Z,1443540860.242 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T15:34:20.643Z,1443540860.643 [DataOverHttps](INFO): setting available, lastComms_.elapsed()=0.003300
2015-09-29T15:34:20.647Z,1443540860.647 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T15:34:21.042Z,1443540861.042 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T15:34:21.442Z,1443540861.442 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T15:34:21.841Z,1443540861.841 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T15:34:22.241Z,1443540862.241 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T15:34:22.641Z,1443540862.641 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T15:34:23.040Z,1443540863.040 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T15:34:23.441Z,1443540863.441 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T15:34:23.841Z,1443540863.841 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T15:34:24.242Z,1443540864.242 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T15:34:24.649Z,1443540864.649 [NAL9602](INFO): No messages in MT queue
2015-09-29T15:34:24.650Z,1443540864.650 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T15:34:25.040Z,1443540865.040 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T15:34:25.448Z,1443540865.448 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T15:34:25.841Z,1443540865.841 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T15:34:26.241Z,1443540866.241 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T15:34:26.646Z,1443540866.646 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T15:34:27.040Z,1443540867.040 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T15:34:27.441Z,1443540867.441 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T15:34:27.842Z,1443540867.842 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T15:34:28.240Z,1443540868.240 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T15:34:28.640Z,1443540868.640 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T15:34:29.040Z,1443540869.040 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T15:34:29.440Z,1443540869.440 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T15:34:29.454Z,1443540869.454 [SBIT](IMPORTANT): Beginning Startup BIT
2015-09-29T15:34:29.840Z,1443540869.840 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T15:34:30.242Z,1443540870.242 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T15:34:30.641Z,1443540870.641 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T15:34:31.041Z,1443540871.041 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T15:34:31.441Z,1443540871.441 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T15:34:31.841Z,1443540871.841 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T15:34:32.251Z,1443540872.251 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T15:34:32.641Z,1443540872.641 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T15:34:33.050Z,1443540873.050 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T15:34:33.451Z,1443540873.451 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T15:34:33.851Z,1443540873.851 [D