2015-09-29T15:10:16.085Z,1443539416.085 [Supervisor](DEBUG): Initializing supervisor.
2015-09-29T15:10:16.090Z,1443539416.090 [SyncHandler](DEBUG): Created PCaller Thread at 4034C4E0
2015-09-29T15:10:16.090Z,1443539416.090 [SyncHandler](INFO): Protected caller Thread ID is 761
2015-09-29T15:10:16.091Z,1443539416.091 [ComponentRegistry](DEBUG): Component "controlThread" handled in its own thread.
2015-09-29T15:10:16.094Z,1443539416.094 [controlThread ThreadHandler](DEBUG): Created PCaller Thread at 4037C4E0
2015-09-29T15:10:16.094Z,1443539416.094 [controlThread ThreadHandler](INFO): Protected caller Thread ID is 762
2015-09-29T15:10:16.097Z,1443539416.097 [ComponentRegistry](DEBUG): SyncComponent "CycleStarter" handled in the control thread.
2015-09-29T15:10:16.109Z,1443539416.109 [ComponentRegistry](DEBUG): Component "CommandLine" handled in its own thread.
2015-09-29T15:10:16.114Z,1443539416.114 [CommandLine ThreadHandler](DEBUG): Created PCaller Thread at 403AC4E0
2015-09-29T15:10:16.114Z,1443539416.114 [CommandLine ThreadHandler](INFO): Protected caller Thread ID is 763
2015-09-29T15:10:16.115Z,1443539416.115 [ComponentRegistry](DEBUG): Component "logger" handled in its own thread.
2015-09-29T15:10:16.118Z,1443539416.118 [logger ThreadHandler](DEBUG): Created PCaller Thread at 403DC4E0
2015-09-29T15:10:16.118Z,1443539416.118 [logger ThreadHandler](INFO): Protected caller Thread ID is 764
2015-09-29T15:10:16.120Z,1443539416.120 [ComponentRegistry](DEBUG): SyncComponent "LogSplitter" handled in the control thread.
2015-09-29T15:10:16.120Z,1443539416.120 [Supervisor](INFO): Looking for Config files in directory: Config/
2015-09-29T15:10:16.124Z,1443539416.124 [Supervisor](INFO): Opening Config file at: Config/Control.cfg
2015-09-29T15:10:16.505Z,1443539416.505 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Control
2015-09-29T15:10:16.507Z,1443539416.507 [Supervisor](INFO): Opening Config file at: Config/BIT.cfg
2015-09-29T15:10:16.694Z,1443539416.694 [ComponentRegistry](DEBUG): Loaded Config Component "Config/BIT
2015-09-29T15:10:16.696Z,1443539416.696 [Supervisor](INFO): Opening Config file at: Config/Derivation.cfg
2015-09-29T15:10:16.842Z,1443539416.842 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Derivation
2015-09-29T15:10:16.843Z,1443539416.843 [Supervisor](INFO): Opening Config file at: Config/Estimation.cfg
2015-09-29T15:10:16.990Z,1443539416.990 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Estimation
2015-09-29T15:10:16.991Z,1443539416.991 [Supervisor](INFO): Opening Config file at: Config/Guidance.cfg
2015-09-29T15:10:17.085Z,1443539417.085 [Supervisor](INFO): Opening Config file at: Config/Navigation.cfg
2015-09-29T15:10:17.307Z,1443539417.307 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Navigation
2015-09-29T15:10:17.307Z,1443539417.307 [Supervisor](INFO): Opening Config file at: Config/Sample.cfg
2015-09-29T15:10:17.402Z,1443539417.402 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Sample
2015-09-29T15:10:17.403Z,1443539417.403 [Supervisor](INFO): Opening Config file at: Config/Science.cfg
2015-09-29T15:10:17.715Z,1443539417.715 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Science
2015-09-29T15:10:17.715Z,1443539417.715 [Supervisor](INFO): Opening Config file at: Config/Sensor.cfg
2015-09-29T15:10:18.115Z,1443539418.115 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Sensor
2015-09-29T15:10:18.115Z,1443539418.115 [Supervisor](INFO): Opening Config file at: Config/Servo.cfg
2015-09-29T15:10:18.467Z,1443539418.467 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Servo
2015-09-29T15:10:18.469Z,1443539418.469 [Supervisor](INFO): Opening Config file at: Config/Simulator.cfg
2015-09-29T15:10:19.063Z,1443539419.063 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Simulator
2015-09-29T15:10:19.064Z,1443539419.064 [Supervisor](INFO): Opening Config file at: Config/logger.cfg
2015-09-29T15:10:19.295Z,1443539419.295 [ComponentRegistry](DEBUG): Loaded Config Component "Config/logger
2015-09-29T15:10:19.295Z,1443539419.295 [Supervisor](INFO): Opening Config file at: Config/secure.cfg
2015-09-29T15:10:19.415Z,1443539419.415 [ComponentRegistry](DEBUG): Loaded Config Component "Config/secure
2015-09-29T15:10:19.415Z,1443539419.415 [Supervisor](INFO): Opening Config file at: Config/vehicle.cfg
2015-09-29T15:10:19.929Z,1443539419.929 [ComponentRegistry](DEBUG): Loaded Config Component "Config/vehicle
2015-09-29T15:10:19.930Z,1443539419.930 [Supervisor](INFO): Opening Config file at: Config/workSite.cfg
2015-09-29T15:10:20.107Z,1443539420.107 [ComponentRegistry](DEBUG): Loaded Config Component "Config/workSite
2015-09-29T15:10:20.109Z,1443539420.109 [Supervisor](INFO): Looking for Config files in directory: Config/(none)/
2015-09-29T15:10:20.110Z,1443539420.110 [Supervisor](FAULT): Ignoring configuration overrides from Data/persisted.cfg
2015-09-29T15:10:20.114Z,1443539420.114 [Module Loader](DEBUG): Loading Module at Modules/Control.so
2015-09-29T15:10:20.188Z,1443539420.188 [VerticalControl](DEBUG): Construct VerticalControl.
2015-09-29T15:10:20.321Z,1443539420.321 [VerticalControl] Loaded
2015-09-29T15:10:20.321Z,1443539420.321 [ComponentRegistry](DEBUG): SyncComponent "VerticalControl" handled in the control thread.
2015-09-29T15:10:20.322Z,1443539420.322 [HorizontalControl](DEBUG): Construct HorizontalControl.
2015-09-29T15:10:20.406Z,1443539420.406 [HorizontalControl] Loaded
2015-09-29T15:10:20.406Z,1443539420.406 [ComponentRegistry](DEBUG): SyncComponent "HorizontalControl" handled in the control thread.
2015-09-29T15:10:20.407Z,1443539420.407 [SpeedControl](DEBUG): Construct SpeedControl.
2015-09-29T15:10:20.413Z,1443539420.413 [SpeedControl] Loaded
2015-09-29T15:10:20.413Z,1443539420.413 [ComponentRegistry](DEBUG): SyncComponent "SpeedControl" handled in the control thread.
2015-09-29T15:10:20.414Z,1443539420.414 [LoopControl](DEBUG): Construct LoopControl.
2015-09-29T15:10:20.414Z,1443539420.414 [LoopControl] Loaded
2015-09-29T15:10:20.415Z,1443539420.415 [ComponentRegistry](DEBUG): SyncComponent "LoopControl" handled in the control thread.
2015-09-29T15:10:20.415Z,1443539420.415 [Module Loader](DEBUG): Loaded Module: Control (Contains the Control components, such as Depth, Heading, and Speed Control)
2015-09-29T15:10:20.416Z,1443539420.416 [Module Loader](DEBUG): Loading Module at Modules/BIT.so
2015-09-29T15:10:20.575Z,1443539420.575 [SBIT](DEBUG): Construct Startup Built In Test.
2015-09-29T15:10:20.587Z,1443539420.587 [SBIT] Loaded
2015-09-29T15:10:20.587Z,1443539420.587 [ComponentRegistry](DEBUG): SyncComponent "SBIT" handled in the control thread.
2015-09-29T15:10:20.588Z,1443539420.588 [IBIT](DEBUG): Construct Initiated Built In Test.
2015-09-29T15:10:20.626Z,1443539420.626 [IBIT] Loaded
2015-09-29T15:10:20.626Z,1443539420.626 [ComponentRegistry](DEBUG): SyncComponent "IBIT" handled in the control thread.
2015-09-29T15:10:20.628Z,1443539420.628 [CBIT](DEBUG): Construct Continuous Built In Test.
2015-09-29T15:10:20.778Z,1443539420.778 [CBIT] Loaded
2015-09-29T15:10:20.778Z,1443539420.778 [ComponentRegistry](DEBUG): SyncComponent "CBIT" handled in the control thread.
2015-09-29T15:10:20.779Z,1443539420.779 [Module Loader](DEBUG): Loaded Module: BIT (Contains the BuiltInTest components, such as C Built In Test)
2015-09-29T15:10:20.780Z,1443539420.780 [Module Loader](DEBUG): Loading Module at Modules/Derivation.so
2015-09-29T15:10:20.820Z,1443539420.820 [DepthRateCalculator] Loaded
2015-09-29T15:10:20.821Z,1443539420.821 [ComponentRegistry](DEBUG): SyncComponent "DepthRateCalculator" handled in the control thread.
2015-09-29T15:10:20.826Z,1443539420.826 [PitchRateCalculator] Loaded
2015-09-29T15:10:20.827Z,1443539420.827 [ComponentRegistry](DEBUG): SyncComponent "PitchRateCalculator" handled in the control thread.
2015-09-29T15:10:20.838Z,1443539420.838 [SpeedCalculator] Loaded
2015-09-29T15:10:20.838Z,1443539420.838 [ComponentRegistry](DEBUG): SyncComponent "SpeedCalculator" handled in the control thread.
2015-09-29T15:10:20.859Z,1443539420.859 [TempGradientCalculator] Loaded
2015-09-29T15:10:20.860Z,1443539420.860 [ComponentRegistry](DEBUG): SyncComponent "TempGradientCalculator" handled in the control thread.
2015-09-29T15:10:20.877Z,1443539420.877 [VerticalTemperatureHomogeneityIndexCalculator] Loaded
2015-09-29T15:10:20.877Z,1443539420.877 [ComponentRegistry](DEBUG): SyncComponent "VerticalTemperatureHomogeneityIndexCalculator" handled in the control thread.
2015-09-29T15:10:20.883Z,1443539420.883 [YawRateCalculator] Loaded
2015-09-29T15:10:20.883Z,1443539420.883 [ComponentRegistry](DEBUG): SyncComponent "YawRateCalculator" handled in the control thread.
2015-09-29T15:10:20.883Z,1443539420.883 [Module Loader](DEBUG): Loaded Module: Derivation (Contains the base derivation components)
2015-09-29T15:10:20.884Z,1443539420.884 [Module Loader](DEBUG): Loading Module at Modules/Estimation.so
2015-09-29T15:10:21.004Z,1443539421.004 [StratificationFrontDetector](INFO): threshold set to: 0.399988 degC
2015-09-29T15:10:21.004Z,1443539421.004 [StratificationFrontDetector](DEBUG): (re)initializing
2015-09-29T15:10:21.004Z,1443539421.004 [StratificationFrontDetector] Loaded
2015-09-29T15:10:21.004Z,1443539421.004 [ComponentRegistry](DEBUG): SyncComponent "StratificationFrontDetector" handled in the control thread.
2015-09-29T15:10:21.005Z,1443539421.005 [Module Loader](DEBUG): Loaded Module: Estimation (Contains the base estimation components)
2015-09-29T15:10:21.006Z,1443539421.006 [Module Loader](DEBUG): Loading Module at Modules/Guidance.so
2015-09-29T15:10:21.298Z,1443539421.298 [Module Loader](DEBUG): Loaded Module: Guidance (Contains behaviors and commands)
2015-09-29T15:10:21.299Z,1443539421.299 [Module Loader](DEBUG): Loading Module at Modules/Navigation.so
2015-09-29T15:10:21.427Z,1443539421.427 [DeadReckonUsingMultipleVelocitySources] Loaded
2015-09-29T15:10:21.427Z,1443539421.427 [ComponentRegistry](DEBUG): SyncComponent "DeadReckonUsingMultipleVelocitySources" handled in the control thread.
2015-09-29T15:10:21.492Z,1443539421.492 [DeadReckonUsingSpeedCalculator] Loaded
2015-09-29T15:10:21.492Z,1443539421.492 [ComponentRegistry](DEBUG): SyncComponent "DeadReckonUsingSpeedCalculator" handled in the control thread.
2015-09-29T15:10:21.514Z,1443539421.514 [NavChart] Loaded
2015-09-29T15:10:21.514Z,1443539421.514 [ComponentRegistry](DEBUG): SyncComponent "NavChart" handled in the control thread.
2015-09-29T15:10:21.519Z,1443539421.519 [UniversalFixResidualReporter] Loaded
2015-09-29T15:10:21.520Z,1443539421.520 [ComponentRegistry](DEBUG): SyncComponent "UniversalFixResidualReporter" handled in the control thread.
2015-09-29T15:10:21.520Z,1443539421.520 [Module Loader](DEBUG): Loaded Module: Navigation (Contains the base navigation components)
2015-09-29T15:10:21.521Z,1443539421.521 [Module Loader](DEBUG): Loading Module at Modules/Sample.so
2015-09-29T15:10:21.529Z,1443539421.529 [Module Loader](DEBUG): Loaded Module: Sample (This is a Sample Module of Sample Components)
2015-09-29T15:10:21.530Z,1443539421.530 [Module Loader](DEBUG): Loading Module at Modules/Science.so
2015-09-29T15:10:21.834Z,1443539421.834 [CTD_NeilBrown] Loaded
2015-09-29T15:10:21.834Z,1443539421.834 [ComponentRegistry](DEBUG): Component "CTD_NeilBrown" handled in its own thread.
2015-09-29T15:10:21.838Z,1443539421.838 [CTD_NeilBrown ThreadHandler](DEBUG): Created PCaller Thread at 4059D4E0
2015-09-29T15:10:21.838Z,1443539421.838 [CTD_NeilBrown ThreadHandler](INFO): Protected caller Thread ID is 810
2015-09-29T15:10:21.851Z,1443539421.851 [ISUS] Loaded
2015-09-29T15:10:21.851Z,1443539421.851 [ComponentRegistry](DEBUG): SyncComponent "ISUS" handled in the control thread.
2015-09-29T15:10:21.870Z,1443539421.870 [PAR_Licor] Loaded
2015-09-29T15:10:21.870Z,1443539421.870 [ComponentRegistry](DEBUG): SyncComponent "PAR_Licor" handled in the control thread.
2015-09-29T15:10:21.925Z,1443539421.925 [WetLabsBB2FL] Loaded
2015-09-29T15:10:21.926Z,1443539421.926 [ComponentRegistry](DEBUG): Component "WetLabsBB2FL" handled in its own thread.
2015-09-29T15:10:21.930Z,1443539421.930 [WetLabsBB2FL ThreadHandler](DEBUG): Created PCaller Thread at 405CD4E0
2015-09-29T15:10:21.930Z,1443539421.930 [WetLabsBB2FL ThreadHandler](INFO): Protected caller Thread ID is 811
2015-09-29T15:10:21.930Z,1443539421.930 [Module Loader](DEBUG): Loaded Module: Science (Contains the science components)
2015-09-29T15:10:21.931Z,1443539421.931 [Module Loader](DEBUG): Loading Module at Modules/Sensor.so
2015-09-29T15:10:22.655Z,1443539422.655 [AHRS_sp3003D] Loaded
2015-09-29T15:10:22.656Z,1443539422.656 [ComponentRegistry](DEBUG): SyncComponent "AHRS_sp3003D" handled in the control thread.
2015-09-29T15:10:22.850Z,1443539422.850 [DataOverHttps] Loaded
2015-09-29T15:10:22.851Z,1443539422.851 [ComponentRegistry](DEBUG): SyncComponent "DataOverHttps" handled in the control thread.
2015-09-29T15:10:22.864Z,1443539422.864 [Depth_Keller] Loaded
2015-09-29T15:10:22.864Z,1443539422.864 [ComponentRegistry](DEBUG): SyncComponent "Depth_Keller" handled in the control thread.
2015-09-29T15:10:22.870Z,1443539422.870 [DropWeight] Loaded
2015-09-29T15:10:22.870Z,1443539422.870 [ComponentRegistry](DEBUG): SyncComponent "DropWeight" handled in the control thread.
2015-09-29T15:10:23.021Z,1443539423.021 [DVL_micro] Loaded
2015-09-29T15:10:23.021Z,1443539423.021 [ComponentRegistry](DEBUG): SyncComponent "DVL_micro" handled in the control thread.
2015-09-29T15:10:23.129Z,1443539423.129 [NAL9602] Loaded
2015-09-29T15:10:23.129Z,1443539423.129 [ComponentRegistry](DEBUG): SyncComponent "NAL9602" handled in the control thread.
2015-09-29T15:10:23.176Z,1443539423.176 [Onboard] Loaded
2015-09-29T15:10:23.176Z,1443539423.176 [ComponentRegistry](DEBUG): SyncComponent "Onboard" handled in the control thread.
2015-09-29T15:10:23.192Z,1443539423.192 [Radio_Surface] Loaded
2015-09-29T15:10:23.192Z,1443539423.192 [ComponentRegistry](DEBUG): Component "Radio_Surface" handled in its own thread.
2015-09-29T15:10:23.194Z,1443539423.194 [Radio_Surface ThreadHandler](DEBUG): Created PCaller Thread at 408114E0
2015-09-29T15:10:23.194Z,1443539423.194 [Radio_Surface ThreadHandler](INFO): Protected caller Thread ID is 812
2015-09-29T15:10:23.352Z,1443539423.352 [DAT] Loaded
2015-09-29T15:10:23.352Z,1443539423.352 [ComponentRegistry](DEBUG): SyncComponent "DAT" handled in the control thread.
2015-09-29T15:10:23.359Z,1443539423.359 [SCPI] Loaded
2015-09-29T15:10:23.359Z,1443539423.359 [ComponentRegistry](DEBUG): SyncComponent "SCPI" handled in the control thread.
2015-09-29T15:10:23.360Z,1443539423.360 [Module Loader](DEBUG): Loaded Module: Sensor (Contains the sensor components)
2015-09-29T15:10:23.361Z,1443539423.361 [Module Loader](DEBUG): Loading Module at Modules/Servo.so
2015-09-29T15:10:23.490Z,1443539423.490 [BuoyancyServo] Loaded
2015-09-29T15:10:23.490Z,1443539423.490 [ComponentRegistry](DEBUG): SyncComponent "BuoyancyServo" handled in the control thread.
2015-09-29T15:10:23.507Z,1443539423.507 [ElevatorServo] Loaded
2015-09-29T15:10:23.507Z,1443539423.507 [ComponentRegistry](DEBUG): SyncComponent "ElevatorServo" handled in the control thread.
2015-09-29T15:10:23.519Z,1443539423.519 [MassServo] Loaded
2015-09-29T15:10:23.519Z,1443539423.519 [ComponentRegistry](DEBUG): SyncComponent "MassServo" handled in the control thread.
2015-09-29T15:10:23.531Z,1443539423.531 [RudderServo] Loaded
2015-09-29T15:10:23.531Z,1443539423.531 [ComponentRegistry](DEBUG): SyncComponent "RudderServo" handled in the control thread.
2015-09-29T15:10:23.547Z,1443539423.547 [ThrusterServo] Loaded
2015-09-29T15:10:23.547Z,1443539423.547 [ComponentRegistry](DEBUG): SyncComponent "ThrusterServo" handled in the control thread.
2015-09-29T15:10:23.548Z,1443539423.548 [Module Loader](DEBUG): Loaded Module: Servo (This is the module containing motor controllers)
2015-09-29T15:10:23.548Z,1443539423.548 [Module Loader](DEBUG): Loading Module at Modules/Simulator.so
2015-09-29T15:10:23.744Z,1443539423.744 [InternalSim] Loaded
2015-09-29T15:10:23.745Z,1443539423.745 [ComponentRegistry](DEBUG): SyncComponent "InternalSim" handled in the control thread.
2015-09-29T15:10:23.745Z,1443539423.745 [Module Loader](DEBUG): Loaded Module: Simulator (This is the module containing the Simulator)
2015-09-29T15:10:23.746Z,1443539423.746 [Module Loader](DEBUG): Loading Module at Modules/Trigger.so
2015-09-29T15:10:23.793Z,1443539423.793 [Module Loader](DEBUG): Loaded Module: Trigger (Contains triggers for use in missions)
2015-09-29T15:10:23.797Z,1443539423.797 [ComponentRegistry](DEBUG): SyncComponent "MissionManager" handled in the control thread.
2015-09-29T15:10:23.798Z,1443539423.798 [ComponentRegistry](DEBUG): SyncComponent "Reporter" handled in the control thread.
2015-09-29T15:10:23.804Z,1443539423.804 [ComponentRegistry](DEBUG): Component "NavChartDb" handled in its own thread.
2015-09-29T15:10:23.810Z,1443539423.810 [NavChartDb ThreadHandler](DEBUG): Created PCaller Thread at 408BF4E0
2015-09-29T15:10:23.810Z,1443539423.810 [NavChartDb ThreadHandler](INFO): Protected caller Thread ID is 813
2015-09-29T15:10:23.815Z,1443539423.815 [Supervisor](INFO): Main Thread ID is 760
2015-09-29T15:10:23.815Z,1443539423.815 [Supervisor](DEBUG): Running supervisor.
2015-09-29T15:10:23.816Z,1443539423.816 [CommandLine ThreadHandler](INFO): Handler Thread ID is 814
2015-09-29T15:10:23.822Z,1443539423.822 [controlThread ThreadHandler](INFO): Handler Thread ID is 815
2015-09-29T15:10:23.823Z,1443539423.823 [controlThread](DEBUG): Initializing ControlThread
2015-09-29T15:10:23.823Z,1443539423.823 [VerticalControl](DEBUG): Initialize VerticalControlComponent.
2015-09-29T15:10:23.825Z,1443539423.825 [HorizontalControl](DEBUG): Initialize HorizontalControlComponent.
2015-09-29T15:10:23.826Z,1443539423.826 [SpeedControl](DEBUG): Initialize SpeedControlComponent.
2015-09-29T15:10:23.827Z,1443539423.827 [LoopControl](DEBUG): Initialize LoopControlComponent.
2015-09-29T15:10:23.827Z,1443539423.827 [SBIT](INFO): Initialize SBIT Component.
2015-09-29T15:10:23.827Z,1443539423.827 [SBIT](IMPORTANT): Tethys CM Info: SVN revision:12634
2015-09-29T15:10:23.829Z,1443539423.829 [SBIT](INFO): Kernel Reporting Different Release From Configuration.
Kernel Expected: 2.6.32-45-generic-pae
Kernel Reported: 2.6.27.8
2015-09-29T15:10:23.829Z,1443539423.829 [SBIT](INFO): Kernel Reporting Different Version From Configuration.
Kernel Expected: #102-Ubuntu SMP Wed Jan 2 22:10:16 UTC 2013
Kernel Reported: #641 PREEMPT Mon Sep 28 16:45:10 PDT 2015
2015-09-29T15:10:23.830Z,1443539423.830 [SBIT](INFO): Beginning SBIT in 20.000000 seconds.
2015-09-29T15:10:23.831Z,1443539423.831 [IBIT](INFO): Initialize IBIT Component.
2015-09-29T15:10:23.831Z,1443539423.831 [CBIT](DEBUG): Initialize CBIT Component.
2015-09-29T15:10:23.832Z,1443539423.832 [CBIT](FAULT): LAST RESTART WAS UNINTENTIONAL.
2015-09-29T15:10:23.832Z,1443539423.832 [CBIT](INFO): Last reboot was NOT due to watchdog timer.
2015-09-29T15:10:23.832Z,1443539423.832 [DepthRateCalculator](DEBUG): Initializing DepthRateCalculator.
2015-09-29T15:10:23.833Z,1443539423.833 [PitchRateCalculator](DEBUG): Initializing PitchRateCalculator.
2015-09-29T15:10:23.833Z,1443539423.833 [SpeedCalculator](DEBUG): Initializing SpeedCalculator.
2015-09-29T15:10:23.833Z,1443539423.833 [TempGradientCalculator](DEBUG): Initializing TempGradientCalculator.
2015-09-29T15:10:23.834Z,1443539423.834 [VerticalTemperatureHomogeneityIndexCalculator](DEBUG): (re)initializing
2015-09-29T15:10:23.834Z,1443539423.834 [YawRateCalculator](DEBUG): Initializing YawRateCalculator.
2015-09-29T15:10:23.835Z,1443539423.835 [DeadReckonUsingMultipleVelocitySources](DEBUG): Initializing DeadReckonUsingMultipleVelocitySources component.
2015-09-29T15:10:23.836Z,1443539423.836 [DeadReckonUsingMultipleVelocitySources](INFO): Will consider orientation measurement stale after 120s.
2015-09-29T15:10:23.836Z,1443539423.836 [DeadReckonUsingMultipleVelocitySources](INFO): Will consider velocity measurement stale after 20s.
2015-09-29T15:10:23.836Z,1443539423.836 [DeadReckonUsingSpeedCalculator](DEBUG): Initializing DeadReckonUsingSpeedCalculator component.
2015-09-29T15:10:23.837Z,1443539423.837 [DeadReckonUsingSpeedCalculator](INFO): Will consider orientation measurement stale after 120s.
2015-09-29T15:10:23.837Z,1443539423.837 [DeadReckonUsingSpeedCalculator](INFO): Will consider velocity measurement stale after 20s.
2015-09-29T15:10:23.838Z,1443539423.838 [NavChart](DEBUG): Initialize NavChart Navigation.
2015-09-29T15:10:23.838Z,1443539423.838 [UniversalFixResidualReporter](DEBUG): Initializing UniversalFixResidualReporter component.
2015-09-29T15:10:23.843Z,1443539423.843 [InternalSim](DEBUG):  InternalSim initializing...
2015-09-29T15:10:23.879Z,1443539423.879 [logger ThreadHandler](INFO): Handler Thread ID is 816
2015-09-29T15:10:23.928Z,1443539423.928 [CTD_NeilBrown ThreadHandler](INFO): Handler Thread ID is 817
2015-09-29T15:10:23.934Z,1443539423.934 [WetLabsBB2FL ThreadHandler](INFO): Handler Thread ID is 818
2015-09-29T15:10:23.946Z,1443539423.946 [Radio_Surface ThreadHandler](INFO): Handler Thread ID is 819
2015-09-29T15:10:24.001Z,1443539424.001 [NavChartDb ThreadHandler](INFO): Handler Thread ID is 820
2015-09-29T15:10:24.007Z,1443539424.007 [MissionManager](INFO): Loading Mission: Missions/Startup.xml
2015-09-29T15:10:24.071Z,1443539424.071 [Startup:A.GoToSurface](DEBUG): Construct GoToSurface.
2015-09-29T15:10:24.087Z,1443539424.087 [NavChartDb](INFO): Looking for Electronic Nav Chart files in directory: Resources
2015-09-29T15:10:24.088Z,1443539424.088 [MissionManager](DEBUG): 
<?xml version="1.0" encoding="UTF-8"?>
<Mission xmlns="Tethys"
       xmlns:Control="Tethys/Control"
       xmlns:Guidance="Tethys/Guidance" 
       xmlns:Units="Tethys/Units"
       xmlns:Universal="Tethys/Universal"
       xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
       xsi:schemaLocation="Tethys http://okeanids.mbari.org/tethys/Xml/Tethys.xsd
                           Tethys/Control http://okeanids.mbari.org/tethys/Xml/Control.xsd
                           Tethys/Guidance http://okeanids.mbari.org/tethys/Xml/Guidance.xsd
                           Tethys/Units http://okeanids.mbari.org/tethys/Xml/Units.xsd
                           Tethys/Universal http://okeanids.mbari.org/tethys/Xml/Universal.xsd"
       Id="Startup">

    <Guidance:GoToSurface>
        <Progression/>
    </Guidance:GoToSurface>

    <Aggregate Id="StartupSatComms">

        <Sequence/>

        <ReadDatum>
            <Timeout Duration="P1M" />
            <Universal:latitude_fix/>
        </ReadDatum>

        <ReadDatum>
            <Timeout Duration="P1M" />
            <Universal:platform_communications/>
        </ReadDatum>

    </Aggregate>

</Mission>


2015-09-29T15:10:24.089Z,1443539424.089 [MissionManager](INFO): Loading Mission: Missions/Default.xml
2015-09-29T15:10:24.090Z,1443539424.090 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US1WC07M.000
2015-09-29T15:10:24.090Z,1443539424.090 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US2WC11M.000
2015-09-29T15:10:24.091Z,1443539424.091 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US3CA52M.000
2015-09-29T15:10:24.091Z,1443539424.091 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US4CA60M.000
2015-09-29T15:10:24.091Z,1443539424.091 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA50M.000
2015-09-29T15:10:24.091Z,1443539424.091 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA61M.000
2015-09-29T15:10:24.092Z,1443539424.092 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA62M.000
2015-09-29T15:10:24.092Z,1443539424.092 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA83M.000
2015-09-29T15:10:24.144Z,1443539424.144 [MissionManager](INFO): DefineArg Default.ElapsedSinceDefaultStarted = 0.000000 min
2015-09-29T15:10:24.145Z,1443539424.145 [Default:A.GoToSurface](DEBUG): Construct GoToSurface.
2015-09-29T15:10:24.203Z,1443539424.203 [Default:CheckIn:Read_Iridium:A_Timeout:A.Execute](DEBUG): Construct Execute.
2015-09-29T15:10:24.205Z,1443539424.205 [Default:CheckIn:C.Wait](DEBUG): Construct Wait.
2015-09-29T15:10:24.223Z,1443539424.223 [Default:D.Execute](DEBUG): Construct Execute.
2015-09-29T15:10:24.243Z,1443539424.243 [MissionManager](DEBUG): 
<?xml version="1.0" encoding="UTF-8"?>
<Mission xmlns="Tethys"
xmlns:Guidance="Tethys/Guidance"
xmlns:Units="Tethys/Units"
xmlns:Universal="Tethys/Universal"
xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
xsi:schemaLocation="Tethys http://okeanids.mbari.org/tethys/Xml/Tethys.xsd
Tethys/Guidance http://okeanids.mbari.org/tethys/Xml/Guidance.xsd
Tethys/Units http://okeanids.mbari.org/tethys/Xml/Units.xsd
Tethys/Universal http://okeanids.mbari.org/tethys/Xml/Universal.xsd"
Id="Default">

    <DefineArg Name="ElapsedSinceDefaultStarted"><Units:minute/><Value>0</Value></DefineArg>

    <Guidance:GoToSurface>
        <Progression/>
    </Guidance:GoToSurface>

    <Aggregate Id="CheckIn">

        <Sequence Repeat="288"/>

        <ReadDatum Id="Read_GPS">
            <Sequence/>
            <Timeout Duration="P5M"/>
            <Universal:time_fix/>
        </ReadDatum>

        <ReadDatum Id="Read_Iridium">
            <Sequence/>
            <Timeout Duration="P2H">
                <Guidance:Execute>
                    <Sequence/>
                    <Setting><Guidance:Execute.command/><String>Burn 300</String></Setting>
                </Guidance:Execute>
                <Syslog Severity="Critical">Dropped weight due to communications timeout.</Syslog>
            </Timeout>
            <Universal:platform_communications/>
        </ReadDatum>

        <Guidance:Wait>
            <Sequence/>
            <Setting><Guidance:Wait.duration/><Units:minute/><Value>5</Value></Setting>
        </Guidance:Wait>

        <Assign><Sequence/><Arg Name="ElapsedSinceDefaultStarted"/><Elapsed><Universal:mission_started/></Elapsed></Assign>

        <Syslog Severity="Important">Default mission has been running for <Arg Name="ElapsedSinceDefaultStarted"/><Units:minute/></Syslog>

    </Aggregate>

    <Syslog Severity="Important">Restarting logs and Default mission.</Syslog>

    <Guidance:Execute>
        <Sequence/>
        <Setting><Guidance:Execute.command/><String>restart logs</String></Setting>
    </Guidance:Execute>

</Mission>


2015-09-29T15:10:24.249Z,1443539424.249 [controlThread](DEBUG): Component order: CycleStarter,InternalSim,ISUS,PAR_Licor,AHRS_sp3003D,DataOverHttps,Depth_Keller,DropWeight,DVL_micro,NAL9602,Onboard,DAT,SCPI,PAR_Licor,Depth_Keller,DepthRateCalculator,PitchRateCalculator,SpeedCalculator,TempGradientCalculator,VerticalTemperatureHomogeneityIndexCalculator,YawRateCalculator,StratificationFrontDetector,DeadReckonUsingMultipleVelocitySources,DeadReckonUsingSpeedCalculator,NavChart,UniversalFixResidualReporter,MissionManager,VerticalControl,HorizontalControl,SpeedControl,LoopControl,BuoyancyServo,ElevatorServo,MassServo,RudderServo,ThrusterServo,SBIT,IBIT,CBIT,Reporter,LogSplitter,
2015-09-29T15:10:24.517Z,1443539424.517 [DVL_micro](INFO): Initializing
2015-09-29T15:10:24.695Z,1443539424.695 [DeadReckonUsingMultipleVelocitySources](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T15:10:24.719Z,1443539424.719 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T15:10:24.834Z,1443539424.834 [BuoyancyServo](DEBUG): Initializing BuoyancyServo.
2015-09-29T15:10:24.848Z,1443539424.848 [ElevatorServo](DEBUG): Initializing ElevatorServo.
2015-09-29T15:10:24.870Z,1443539424.870 [MassServo](DEBUG): Initializing MassServo.
2015-09-29T15:10:24.878Z,1443539424.878 [RudderServo](DEBUG): Initializing RudderServo.
2015-09-29T15:10:24.902Z,1443539424.902 [ThrusterServo](DEBUG): Initializing ThrusterServo.
2015-09-29T15:10:25.151Z,1443539425.151 [DeadReckonUsingMultipleVelocitySources](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T15:10:25.152Z,1443539425.152 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T15:10:34.174Z,1443539434.174 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T15:10:34.508Z,1443539434.508 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T15:10:34.644Z,1443539434.644 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T15:10:35.045Z,1443539435.045 [DataOverHttps](INFO): setting available, lastComms_.elapsed()=0.003000
2015-09-29T15:10:35.049Z,1443539435.049 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T15:10:35.443Z,1443539435.443 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T15:10:35.843Z,1443539435.843 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T15:10:36.244Z,1443539436.244 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T15:10:36.643Z,1443539436.643 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T15:10:37.043Z,1443539437.043 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T15:10:37.442Z,1443539437.442 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T15:10:37.842Z,1443539437.842 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T15:10:38.243Z,1443539438.243 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T15:10:38.652Z,1443539438.652 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T15:10:39.053Z,1443539439.053 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T15:10:39.442Z,1443539439.442 [NAL9602](INFO): No messages in MT queue
2015-09-29T15:10:39.443Z,1443539439.443 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T15:10:39.842Z,1443539439.842 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T15:10:40.243Z,1443539440.243 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T15:10:40.652Z,1443539440.652 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T15:10:41.043Z,1443539441.043 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T15:10:41.452Z,1443539441.452 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T15:10:41.850Z,1443539441.850 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T15:10:42.242Z,1443539442.242 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T15:10:42.642Z,1443539442.642 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T15:10:43.042Z,1443539443.042 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T15:10:43.443Z,1443539443.443 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T15:10:43.842Z,1443539443.842 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T15:10:44.242Z,1443539444.242 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T15:10:44.281Z,1443539444.281 [SBIT](IMPORTANT): Beginning Startup BIT
2015-09-29T15:10:44.642Z,1443539444.642 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T15:10:45.043Z,1443539445.043 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T15:10:45.442Z,1443539445.442 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T15:10:45.842Z,1443539445.842 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T15:10:46.243Z,1443539446.243 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T15:10:46.643Z,1443539446.643 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T15:10:47.043Z,1443539447.043 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T15:10:47.452Z,1443539447.452 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T15:10:47.852Z,1443539447.852 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T15:10:48.252Z,1443539448.252 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T15:10:48.643Z,1443539448.643 [D