2015-09-29T15:02:21.026Z,1443538941.026 [Supervisor](DEBUG): Initializing supervisor.
2015-09-29T15:02:21.031Z,1443538941.031 [SyncHandler](DEBUG): Created PCaller Thread at 4034C4E0
2015-09-29T15:02:21.032Z,1443538941.032 [SyncHandler](INFO): Protected caller Thread ID is 762
2015-09-29T15:02:21.032Z,1443538941.032 [ComponentRegistry](DEBUG): Component "controlThread" handled in its own thread.
2015-09-29T15:02:21.035Z,1443538941.035 [controlThread ThreadHandler](DEBUG): Created PCaller Thread at 4037C4E0
2015-09-29T15:02:21.036Z,1443538941.036 [controlThread ThreadHandler](INFO): Protected caller Thread ID is 763
2015-09-29T15:02:21.039Z,1443538941.039 [ComponentRegistry](DEBUG): SyncComponent "CycleStarter" handled in the control thread.
2015-09-29T15:02:21.051Z,1443538941.051 [ComponentRegistry](DEBUG): Component "CommandLine" handled in its own thread.
2015-09-29T15:02:21.055Z,1443538941.055 [CommandLine ThreadHandler](DEBUG): Created PCaller Thread at 403AC4E0
2015-09-29T15:02:21.056Z,1443538941.056 [CommandLine ThreadHandler](INFO): Protected caller Thread ID is 764
2015-09-29T15:02:21.057Z,1443538941.057 [ComponentRegistry](DEBUG): Component "logger" handled in its own thread.
2015-09-29T15:02:21.059Z,1443538941.059 [logger ThreadHandler](DEBUG): Created PCaller Thread at 403DC4E0
2015-09-29T15:02:21.060Z,1443538941.060 [logger ThreadHandler](INFO): Protected caller Thread ID is 765
2015-09-29T15:02:21.062Z,1443538941.062 [ComponentRegistry](DEBUG): SyncComponent "LogSplitter" handled in the control thread.
2015-09-29T15:02:21.062Z,1443538941.062 [Supervisor](INFO): Looking for Config files in directory: Config/
2015-09-29T15:02:21.066Z,1443538941.066 [Supervisor](INFO): Opening Config file at: Config/Control.cfg
2015-09-29T15:02:21.457Z,1443538941.457 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Control
2015-09-29T15:02:21.459Z,1443538941.459 [Supervisor](INFO): Opening Config file at: Config/BIT.cfg
2015-09-29T15:02:21.652Z,1443538941.652 [ComponentRegistry](DEBUG): Loaded Config Component "Config/BIT
2015-09-29T15:02:21.654Z,1443538941.654 [Supervisor](INFO): Opening Config file at: Config/Derivation.cfg
2015-09-29T15:02:21.799Z,1443538941.799 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Derivation
2015-09-29T15:02:21.799Z,1443538941.799 [Supervisor](INFO): Opening Config file at: Config/Estimation.cfg
2015-09-29T15:02:21.948Z,1443538941.948 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Estimation
2015-09-29T15:02:21.949Z,1443538941.949 [Supervisor](INFO): Opening Config file at: Config/Guidance.cfg
2015-09-29T15:02:22.047Z,1443538942.047 [Supervisor](INFO): Opening Config file at: Config/Navigation.cfg
2015-09-29T15:02:22.269Z,1443538942.269 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Navigation
2015-09-29T15:02:22.269Z,1443538942.269 [Supervisor](INFO): Opening Config file at: Config/Sample.cfg
2015-09-29T15:02:22.367Z,1443538942.367 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Sample
2015-09-29T15:02:22.367Z,1443538942.367 [Supervisor](INFO): Opening Config file at: Config/Science.cfg
2015-09-29T15:02:22.681Z,1443538942.681 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Science
2015-09-29T15:02:22.681Z,1443538942.681 [Supervisor](INFO): Opening Config file at: Config/Sensor.cfg
2015-09-29T15:02:23.081Z,1443538943.081 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Sensor
2015-09-29T15:02:23.081Z,1443538943.081 [Supervisor](INFO): Opening Config file at: Config/Servo.cfg
2015-09-29T15:02:23.436Z,1443538943.436 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Servo
2015-09-29T15:02:23.438Z,1443538943.438 [Supervisor](INFO): Opening Config file at: Config/Simulator.cfg
2015-09-29T15:02:24.037Z,1443538944.037 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Simulator
2015-09-29T15:02:24.038Z,1443538944.038 [Supervisor](INFO): Opening Config file at: Config/logger.cfg
2015-09-29T15:02:24.269Z,1443538944.269 [ComponentRegistry](DEBUG): Loaded Config Component "Config/logger
2015-09-29T15:02:24.270Z,1443538944.270 [Supervisor](INFO): Opening Config file at: Config/secure.cfg
2015-09-29T15:02:24.384Z,1443538944.384 [ComponentRegistry](DEBUG): Loaded Config Component "Config/secure
2015-09-29T15:02:24.385Z,1443538944.385 [Supervisor](INFO): Opening Config file at: Config/vehicle.cfg
2015-09-29T15:02:24.904Z,1443538944.904 [ComponentRegistry](DEBUG): Loaded Config Component "Config/vehicle
2015-09-29T15:02:24.905Z,1443538944.905 [Supervisor](INFO): Opening Config file at: Config/workSite.cfg
2015-09-29T15:02:25.084Z,1443538945.084 [ComponentRegistry](DEBUG): Loaded Config Component "Config/workSite
2015-09-29T15:02:25.086Z,1443538945.086 [Supervisor](INFO): Looking for Config files in directory: Config/(none)/
2015-09-29T15:02:25.086Z,1443538945.086 [Supervisor](FAULT): Ignoring configuration overrides from Data/persisted.cfg
2015-09-29T15:02:25.091Z,1443538945.091 [Module Loader](DEBUG): Loading Module at Modules/Control.so
2015-09-29T15:02:25.165Z,1443538945.165 [VerticalControl](DEBUG): Construct VerticalControl.
2015-09-29T15:02:25.300Z,1443538945.300 [VerticalControl] Loaded
2015-09-29T15:02:25.301Z,1443538945.301 [ComponentRegistry](DEBUG): SyncComponent "VerticalControl" handled in the control thread.
2015-09-29T15:02:25.301Z,1443538945.301 [HorizontalControl](DEBUG): Construct HorizontalControl.
2015-09-29T15:02:25.382Z,1443538945.382 [HorizontalControl] Loaded
2015-09-29T15:02:25.383Z,1443538945.383 [ComponentRegistry](DEBUG): SyncComponent "HorizontalControl" handled in the control thread.
2015-09-29T15:02:25.387Z,1443538945.387 [SpeedControl](DEBUG): Construct SpeedControl.
2015-09-29T15:02:25.393Z,1443538945.393 [SpeedControl] Loaded
2015-09-29T15:02:25.394Z,1443538945.394 [ComponentRegistry](DEBUG): SyncComponent "SpeedControl" handled in the control thread.
2015-09-29T15:02:25.394Z,1443538945.394 [LoopControl](DEBUG): Construct LoopControl.
2015-09-29T15:02:25.395Z,1443538945.395 [LoopControl] Loaded
2015-09-29T15:02:25.395Z,1443538945.395 [ComponentRegistry](DEBUG): SyncComponent "LoopControl" handled in the control thread.
2015-09-29T15:02:25.396Z,1443538945.396 [Module Loader](DEBUG): Loaded Module: Control (Contains the Control components, such as Depth, Heading, and Speed Control)
2015-09-29T15:02:25.396Z,1443538945.396 [Module Loader](DEBUG): Loading Module at Modules/BIT.so
2015-09-29T15:02:25.554Z,1443538945.554 [SBIT](DEBUG): Construct Startup Built In Test.
2015-09-29T15:02:25.567Z,1443538945.567 [SBIT] Loaded
2015-09-29T15:02:25.567Z,1443538945.567 [ComponentRegistry](DEBUG): SyncComponent "SBIT" handled in the control thread.
2015-09-29T15:02:25.568Z,1443538945.568 [IBIT](DEBUG): Construct Initiated Built In Test.
2015-09-29T15:02:25.602Z,1443538945.602 [IBIT] Loaded
2015-09-29T15:02:25.602Z,1443538945.602 [ComponentRegistry](DEBUG): SyncComponent "IBIT" handled in the control thread.
2015-09-29T15:02:25.605Z,1443538945.605 [CBIT](DEBUG): Construct Continuous Built In Test.
2015-09-29T15:02:25.760Z,1443538945.760 [CBIT] Loaded
2015-09-29T15:02:25.760Z,1443538945.760 [ComponentRegistry](DEBUG): SyncComponent "CBIT" handled in the control thread.
2015-09-29T15:02:25.761Z,1443538945.761 [Module Loader](DEBUG): Loaded Module: BIT (Contains the BuiltInTest components, such as C Built In Test)
2015-09-29T15:02:25.761Z,1443538945.761 [Module Loader](DEBUG): Loading Module at Modules/Derivation.so
2015-09-29T15:02:25.799Z,1443538945.799 [DepthRateCalculator] Loaded
2015-09-29T15:02:25.799Z,1443538945.799 [ComponentRegistry](DEBUG): SyncComponent "DepthRateCalculator" handled in the control thread.
2015-09-29T15:02:25.808Z,1443538945.808 [PitchRateCalculator] Loaded
2015-09-29T15:02:25.809Z,1443538945.809 [ComponentRegistry](DEBUG): SyncComponent "PitchRateCalculator" handled in the control thread.
2015-09-29T15:02:25.820Z,1443538945.820 [SpeedCalculator] Loaded
2015-09-29T15:02:25.821Z,1443538945.821 [ComponentRegistry](DEBUG): SyncComponent "SpeedCalculator" handled in the control thread.
2015-09-29T15:02:25.842Z,1443538945.842 [TempGradientCalculator] Loaded
2015-09-29T15:02:25.842Z,1443538945.842 [ComponentRegistry](DEBUG): SyncComponent "TempGradientCalculator" handled in the control thread.
2015-09-29T15:02:25.859Z,1443538945.859 [VerticalTemperatureHomogeneityIndexCalculator] Loaded
2015-09-29T15:02:25.860Z,1443538945.860 [ComponentRegistry](DEBUG): SyncComponent "VerticalTemperatureHomogeneityIndexCalculator" handled in the control thread.
2015-09-29T15:02:25.865Z,1443538945.865 [YawRateCalculator] Loaded
2015-09-29T15:02:25.865Z,1443538945.865 [ComponentRegistry](DEBUG): SyncComponent "YawRateCalculator" handled in the control thread.
2015-09-29T15:02:25.866Z,1443538945.866 [Module Loader](DEBUG): Loaded Module: Derivation (Contains the base derivation components)
2015-09-29T15:02:25.867Z,1443538945.867 [Module Loader](DEBUG): Loading Module at Modules/Estimation.so
2015-09-29T15:02:25.987Z,1443538945.987 [StratificationFrontDetector](INFO): threshold set to: 0.399988 degC
2015-09-29T15:02:25.987Z,1443538945.987 [StratificationFrontDetector](DEBUG): (re)initializing
2015-09-29T15:02:25.987Z,1443538945.987 [StratificationFrontDetector] Loaded
2015-09-29T15:02:25.988Z,1443538945.988 [ComponentRegistry](DEBUG): SyncComponent "StratificationFrontDetector" handled in the control thread.
2015-09-29T15:02:25.988Z,1443538945.988 [Module Loader](DEBUG): Loaded Module: Estimation (Contains the base estimation components)
2015-09-29T15:02:25.989Z,1443538945.989 [Module Loader](DEBUG): Loading Module at Modules/Guidance.so
2015-09-29T15:02:26.280Z,1443538946.280 [Module Loader](DEBUG): Loaded Module: Guidance (Contains behaviors and commands)
2015-09-29T15:02:26.281Z,1443538946.281 [Module Loader](DEBUG): Loading Module at Modules/Navigation.so
2015-09-29T15:02:26.414Z,1443538946.414 [DeadReckonUsingMultipleVelocitySources] Loaded
2015-09-29T15:02:26.414Z,1443538946.414 [ComponentRegistry](DEBUG): SyncComponent "DeadReckonUsingMultipleVelocitySources" handled in the control thread.
2015-09-29T15:02:26.475Z,1443538946.475 [DeadReckonUsingSpeedCalculator] Loaded
2015-09-29T15:02:26.475Z,1443538946.475 [ComponentRegistry](DEBUG): SyncComponent "DeadReckonUsingSpeedCalculator" handled in the control thread.
2015-09-29T15:02:26.493Z,1443538946.493 [NavChart] Loaded
2015-09-29T15:02:26.493Z,1443538946.493 [ComponentRegistry](DEBUG): SyncComponent "NavChart" handled in the control thread.
2015-09-29T15:02:26.502Z,1443538946.502 [UniversalFixResidualReporter] Loaded
2015-09-29T15:02:26.503Z,1443538946.503 [ComponentRegistry](DEBUG): SyncComponent "UniversalFixResidualReporter" handled in the control thread.
2015-09-29T15:02:26.503Z,1443538946.503 [Module Loader](DEBUG): Loaded Module: Navigation (Contains the base navigation components)
2015-09-29T15:02:26.504Z,1443538946.504 [Module Loader](DEBUG): Loading Module at Modules/Sample.so
2015-09-29T15:02:26.516Z,1443538946.516 [Module Loader](DEBUG): Loaded Module: Sample (This is a Sample Module of Sample Components)
2015-09-29T15:02:26.517Z,1443538946.517 [Module Loader](DEBUG): Loading Module at Modules/Science.so
2015-09-29T15:02:26.817Z,1443538946.817 [CTD_NeilBrown] Loaded
2015-09-29T15:02:26.817Z,1443538946.817 [ComponentRegistry](DEBUG): Component "CTD_NeilBrown" handled in its own thread.
2015-09-29T15:02:26.819Z,1443538946.819 [CTD_NeilBrown ThreadHandler](DEBUG): Created PCaller Thread at 4059D4E0
2015-09-29T15:02:26.820Z,1443538946.820 [CTD_NeilBrown ThreadHandler](INFO): Protected caller Thread ID is 811
2015-09-29T15:02:26.833Z,1443538946.833 [ISUS] Loaded
2015-09-29T15:02:26.833Z,1443538946.833 [ComponentRegistry](DEBUG): SyncComponent "ISUS" handled in the control thread.
2015-09-29T15:02:26.848Z,1443538946.848 [PAR_Licor] Loaded
2015-09-29T15:02:26.848Z,1443538946.848 [ComponentRegistry](DEBUG): SyncComponent "PAR_Licor" handled in the control thread.
2015-09-29T15:02:26.908Z,1443538946.908 [WetLabsBB2FL] Loaded
2015-09-29T15:02:26.908Z,1443538946.908 [ComponentRegistry](DEBUG): Component "WetLabsBB2FL" handled in its own thread.
2015-09-29T15:02:26.911Z,1443538946.911 [WetLabsBB2FL ThreadHandler](DEBUG): Created PCaller Thread at 405CD4E0
2015-09-29T15:02:26.912Z,1443538946.912 [WetLabsBB2FL ThreadHandler](INFO): Protected caller Thread ID is 812
2015-09-29T15:02:26.912Z,1443538946.912 [Module Loader](DEBUG): Loaded Module: Science (Contains the science components)
2015-09-29T15:02:26.913Z,1443538946.913 [Module Loader](DEBUG): Loading Module at Modules/Sensor.so
2015-09-29T15:02:27.633Z,1443538947.633 [AHRS_sp3003D] Loaded
2015-09-29T15:02:27.633Z,1443538947.633 [ComponentRegistry](DEBUG): SyncComponent "AHRS_sp3003D" handled in the control thread.
2015-09-29T15:02:27.823Z,1443538947.823 [DataOverHttps] Loaded
2015-09-29T15:02:27.823Z,1443538947.823 [ComponentRegistry](DEBUG): SyncComponent "DataOverHttps" handled in the control thread.
2015-09-29T15:02:27.836Z,1443538947.836 [Depth_Keller] Loaded
2015-09-29T15:02:27.837Z,1443538947.837 [ComponentRegistry](DEBUG): SyncComponent "Depth_Keller" handled in the control thread.
2015-09-29T15:02:27.842Z,1443538947.842 [DropWeight] Loaded
2015-09-29T15:02:27.842Z,1443538947.842 [ComponentRegistry](DEBUG): SyncComponent "DropWeight" handled in the control thread.
2015-09-29T15:02:27.999Z,1443538947.999 [DVL_micro] Loaded
2015-09-29T15:02:27.999Z,1443538947.999 [ComponentRegistry](DEBUG): SyncComponent "DVL_micro" handled in the control thread.
2015-09-29T15:02:28.103Z,1443538948.103 [NAL9602] Loaded
2015-09-29T15:02:28.107Z,1443538948.107 [ComponentRegistry](DEBUG): SyncComponent "NAL9602" handled in the control thread.
2015-09-29T15:02:28.155Z,1443538948.155 [Onboard] Loaded
2015-09-29T15:02:28.155Z,1443538948.155 [ComponentRegistry](DEBUG): SyncComponent "Onboard" handled in the control thread.
2015-09-29T15:02:28.167Z,1443538948.167 [Radio_Surface] Loaded
2015-09-29T15:02:28.171Z,1443538948.171 [ComponentRegistry](DEBUG): Component "Radio_Surface" handled in its own thread.
2015-09-29T15:02:28.175Z,1443538948.175 [Radio_Surface ThreadHandler](DEBUG): Created PCaller Thread at 408114E0
2015-09-29T15:02:28.176Z,1443538948.176 [Radio_Surface ThreadHandler](INFO): Protected caller Thread ID is 813
2015-09-29T15:02:28.335Z,1443538948.335 [DAT] Loaded
2015-09-29T15:02:28.336Z,1443538948.336 [ComponentRegistry](DEBUG): SyncComponent "DAT" handled in the control thread.
2015-09-29T15:02:28.342Z,1443538948.342 [SCPI] Loaded
2015-09-29T15:02:28.343Z,1443538948.343 [ComponentRegistry](DEBUG): SyncComponent "SCPI" handled in the control thread.
2015-09-29T15:02:28.343Z,1443538948.343 [Module Loader](DEBUG): Loaded Module: Sensor (Contains the sensor components)
2015-09-29T15:02:28.344Z,1443538948.344 [Module Loader](DEBUG): Loading Module at Modules/Servo.so
2015-09-29T15:02:28.478Z,1443538948.478 [BuoyancyServo] Loaded
2015-09-29T15:02:28.478Z,1443538948.478 [ComponentRegistry](DEBUG): SyncComponent "BuoyancyServo" handled in the control thread.
2015-09-29T15:02:28.491Z,1443538948.491 [ElevatorServo] Loaded
2015-09-29T15:02:28.491Z,1443538948.491 [ComponentRegistry](DEBUG): SyncComponent "ElevatorServo" handled in the control thread.
2015-09-29T15:02:28.507Z,1443538948.507 [MassServo] Loaded
2015-09-29T15:02:28.508Z,1443538948.508 [ComponentRegistry](DEBUG): SyncComponent "MassServo" handled in the control thread.
2015-09-29T15:02:28.520Z,1443538948.520 [RudderServo] Loaded
2015-09-29T15:02:28.520Z,1443538948.520 [ComponentRegistry](DEBUG): SyncComponent "RudderServo" handled in the control thread.
2015-09-29T15:02:28.531Z,1443538948.531 [ThrusterServo] Loaded
2015-09-29T15:02:28.532Z,1443538948.532 [ComponentRegistry](DEBUG): SyncComponent "ThrusterServo" handled in the control thread.
2015-09-29T15:02:28.532Z,1443538948.532 [Module Loader](DEBUG): Loaded Module: Servo (This is the module containing motor controllers)
2015-09-29T15:02:28.533Z,1443538948.533 [Module Loader](DEBUG): Loading Module at Modules/Simulator.so
2015-09-29T15:02:28.731Z,1443538948.731 [InternalSim] Loaded
2015-09-29T15:02:28.731Z,1443538948.731 [ComponentRegistry](DEBUG): SyncComponent "InternalSim" handled in the control thread.
2015-09-29T15:02:28.732Z,1443538948.732 [Module Loader](DEBUG): Loaded Module: Simulator (This is the module containing the Simulator)
2015-09-29T15:02:28.733Z,1443538948.733 [Module Loader](DEBUG): Loading Module at Modules/Trigger.so
2015-09-29T15:02:28.776Z,1443538948.776 [Module Loader](DEBUG): Loaded Module: Trigger (Contains triggers for use in missions)
2015-09-29T15:02:28.780Z,1443538948.780 [ComponentRegistry](DEBUG): SyncComponent "MissionManager" handled in the control thread.
2015-09-29T15:02:28.781Z,1443538948.781 [ComponentRegistry](DEBUG): SyncComponent "Reporter" handled in the control thread.
2015-09-29T15:02:28.792Z,1443538948.792 [ComponentRegistry](DEBUG): Component "NavChartDb" handled in its own thread.
2015-09-29T15:02:28.795Z,1443538948.795 [NavChartDb ThreadHandler](DEBUG): Created PCaller Thread at 408BF4E0
2015-09-29T15:02:28.796Z,1443538948.796 [NavChartDb ThreadHandler](INFO): Protected caller Thread ID is 814
2015-09-29T15:02:28.801Z,1443538948.801 [Supervisor](INFO): Main Thread ID is 761
2015-09-29T15:02:28.801Z,1443538948.801 [Supervisor](DEBUG): Running supervisor.
2015-09-29T15:02:28.801Z,1443538948.801 [CommandLine ThreadHandler](INFO): Handler Thread ID is 815
2015-09-29T15:02:28.808Z,1443538948.808 [controlThread ThreadHandler](INFO): Handler Thread ID is 816
2015-09-29T15:02:28.808Z,1443538948.808 [controlThread](DEBUG): Initializing ControlThread
2015-09-29T15:02:28.809Z,1443538948.809 [VerticalControl](DEBUG): Initialize VerticalControlComponent.
2015-09-29T15:02:28.811Z,1443538948.811 [HorizontalControl](DEBUG): Initialize HorizontalControlComponent.
2015-09-29T15:02:28.812Z,1443538948.812 [SpeedControl](DEBUG): Initialize SpeedControlComponent.
2015-09-29T15:02:28.812Z,1443538948.812 [LoopControl](DEBUG): Initialize LoopControlComponent.
2015-09-29T15:02:28.813Z,1443538948.813 [SBIT](INFO): Initialize SBIT Component.
2015-09-29T15:02:28.813Z,1443538948.813 [SBIT](IMPORTANT): Tethys CM Info: SVN revision:12634
2015-09-29T15:02:28.815Z,1443538948.815 [SBIT](INFO): Kernel Reporting Different Release From Configuration.
Kernel Expected: 2.6.32-45-generic-pae
Kernel Reported: 2.6.27.8
2015-09-29T15:02:28.815Z,1443538948.815 [SBIT](INFO): Kernel Reporting Different Version From Configuration.
Kernel Expected: #102-Ubuntu SMP Wed Jan 2 22:10:16 UTC 2013
Kernel Reported: #641 PREEMPT Mon Sep 28 16:45:10 PDT 2015
2015-09-29T15:02:28.816Z,1443538948.816 [SBIT](INFO): Beginning SBIT in 20.000000 seconds.
2015-09-29T15:02:28.816Z,1443538948.816 [IBIT](INFO): Initialize IBIT Component.
2015-09-29T15:02:28.817Z,1443538948.817 [CBIT](DEBUG): Initialize CBIT Component.
2015-09-29T15:02:28.817Z,1443538948.817 [CBIT](FAULT): LAST RESTART WAS UNINTENTIONAL.
2015-09-29T15:02:28.818Z,1443538948.818 [CBIT](INFO): Last reboot was NOT due to watchdog timer.
2015-09-29T15:02:28.818Z,1443538948.818 [DepthRateCalculator](DEBUG): Initializing DepthRateCalculator.
2015-09-29T15:02:28.818Z,1443538948.818 [PitchRateCalculator](DEBUG): Initializing PitchRateCalculator.
2015-09-29T15:02:28.819Z,1443538948.819 [SpeedCalculator](DEBUG): Initializing SpeedCalculator.
2015-09-29T15:02:28.819Z,1443538948.819 [TempGradientCalculator](DEBUG): Initializing TempGradientCalculator.
2015-09-29T15:02:28.819Z,1443538948.819 [VerticalTemperatureHomogeneityIndexCalculator](DEBUG): (re)initializing
2015-09-29T15:02:28.820Z,1443538948.820 [YawRateCalculator](DEBUG): Initializing YawRateCalculator.
2015-09-29T15:02:28.821Z,1443538948.821 [DeadReckonUsingMultipleVelocitySources](DEBUG): Initializing DeadReckonUsingMultipleVelocitySources component.
2015-09-29T15:02:28.821Z,1443538948.821 [DeadReckonUsingMultipleVelocitySources](INFO): Will consider orientation measurement stale after 120s.
2015-09-29T15:02:28.822Z,1443538948.822 [DeadReckonUsingMultipleVelocitySources](INFO): Will consider velocity measurement stale after 20s.
2015-09-29T15:02:28.822Z,1443538948.822 [DeadReckonUsingSpeedCalculator](DEBUG): Initializing DeadReckonUsingSpeedCalculator component.
2015-09-29T15:02:28.823Z,1443538948.823 [DeadReckonUsingSpeedCalculator](INFO): Will consider orientation measurement stale after 120s.
2015-09-29T15:02:28.823Z,1443538948.823 [DeadReckonUsingSpeedCalculator](INFO): Will consider velocity measurement stale after 20s.
2015-09-29T15:02:28.823Z,1443538948.823 [NavChart](DEBUG): Initialize NavChart Navigation.
2015-09-29T15:02:28.824Z,1443538948.824 [UniversalFixResidualReporter](DEBUG): Initializing UniversalFixResidualReporter component.
2015-09-29T15:02:28.829Z,1443538948.829 [InternalSim](DEBUG):  InternalSim initializing...
2015-09-29T15:02:28.864Z,1443538948.864 [logger ThreadHandler](INFO): Handler Thread ID is 817
2015-09-29T15:02:28.955Z,1443538948.955 [CTD_NeilBrown ThreadHandler](INFO): Handler Thread ID is 818
2015-09-29T15:02:28.996Z,1443538948.996 [WetLabsBB2FL ThreadHandler](INFO): Handler Thread ID is 819
2015-09-29T15:02:29.004Z,1443538949.004 [Radio_Surface ThreadHandler](INFO): Handler Thread ID is 820
2015-09-29T15:02:29.020Z,1443538949.020 [MissionManager](INFO): Loading Mission: Missions/Startup.xml
2015-09-29T15:02:29.041Z,1443538949.041 [NavChartDb ThreadHandler](INFO): Handler Thread ID is 821
2015-09-29T15:02:29.064Z,1443538949.064 [NavChartDb](INFO): Looking for Electronic Nav Chart files in directory: Resources
2015-09-29T15:02:29.066Z,1443538949.066 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US1WC07M.000
2015-09-29T15:02:29.067Z,1443538949.067 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US2WC11M.000
2015-09-29T15:02:29.067Z,1443538949.067 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US3CA52M.000
2015-09-29T15:02:29.067Z,1443538949.067 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US4CA60M.000
2015-09-29T15:02:29.068Z,1443538949.068 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA50M.000
2015-09-29T15:02:29.068Z,1443538949.068 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA61M.000
2015-09-29T15:02:29.068Z,1443538949.068 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA62M.000
2015-09-29T15:02:29.068Z,1443538949.068 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA83M.000
2015-09-29T15:02:29.106Z,1443538949.106 [Startup:A.GoToSurface](DEBUG): Construct GoToSurface.
2015-09-29T15:02:29.128Z,1443538949.128 [MissionManager](DEBUG): 
<?xml version="1.0" encoding="UTF-8"?>
<Mission xmlns="Tethys"
       xmlns:Control="Tethys/Control"
       xmlns:Guidance="Tethys/Guidance" 
       xmlns:Units="Tethys/Units"
       xmlns:Universal="Tethys/Universal"
       xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
       xsi:schemaLocation="Tethys http://okeanids.mbari.org/tethys/Xml/Tethys.xsd
                           Tethys/Control http://okeanids.mbari.org/tethys/Xml/Control.xsd
                           Tethys/Guidance http://okeanids.mbari.org/tethys/Xml/Guidance.xsd
                           Tethys/Units http://okeanids.mbari.org/tethys/Xml/Units.xsd
                           Tethys/Universal http://okeanids.mbari.org/tethys/Xml/Universal.xsd"
       Id="Startup">

    <Guidance:GoToSurface>
        <Progression/>
    </Guidance:GoToSurface>

    <Aggregate Id="StartupSatComms">

        <Sequence/>

        <ReadDatum>
            <Timeout Duration="P1M" />
            <Universal:latitude_fix/>
        </ReadDatum>

        <ReadDatum>
            <Timeout Duration="P1M" />
            <Universal:platform_communications/>
        </ReadDatum>

    </Aggregate>

</Mission>


2015-09-29T15:02:29.129Z,1443538949.129 [MissionManager](INFO): Loading Mission: Missions/Default.xml
2015-09-29T15:02:29.182Z,1443538949.182 [MissionManager](INFO): DefineArg Default.ElapsedSinceDefaultStarted = 0.000000 min
2015-09-29T15:02:29.183Z,1443538949.183 [Default:A.GoToSurface](DEBUG): Construct GoToSurface.
2015-09-29T15:02:29.251Z,1443538949.251 [Default:CheckIn:Read_Iridium:A_Timeout:A.Execute](DEBUG): Construct Execute.
2015-09-29T15:02:29.254Z,1443538949.254 [Default:CheckIn:C.Wait](DEBUG): Construct Wait.
2015-09-29T15:02:29.260Z,1443538949.260 [Default:D.Execute](DEBUG): Construct Execute.
2015-09-29T15:02:29.288Z,1443538949.288 [MissionManager](DEBUG): 
<?xml version="1.0" encoding="UTF-8"?>
<Mission xmlns="Tethys"
xmlns:Guidance="Tethys/Guidance"
xmlns:Units="Tethys/Units"
xmlns:Universal="Tethys/Universal"
xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
xsi:schemaLocation="Tethys http://okeanids.mbari.org/tethys/Xml/Tethys.xsd
Tethys/Guidance http://okeanids.mbari.org/tethys/Xml/Guidance.xsd
Tethys/Units http://okeanids.mbari.org/tethys/Xml/Units.xsd
Tethys/Universal http://okeanids.mbari.org/tethys/Xml/Universal.xsd"
Id="Default">

    <DefineArg Name="ElapsedSinceDefaultStarted"><Units:minute/><Value>0</Value></DefineArg>

    <Guidance:GoToSurface>
        <Progression/>
    </Guidance:GoToSurface>

    <Aggregate Id="CheckIn">

        <Sequence Repeat="288"/>

        <ReadDatum Id="Read_GPS">
            <Sequence/>
            <Timeout Duration="P5M"/>
            <Universal:time_fix/>
        </ReadDatum>

        <ReadDatum Id="Read_Iridium">
            <Sequence/>
            <Timeout Duration="P2H">
                <Guidance:Execute>
                    <Sequence/>
                    <Setting><Guidance:Execute.command/><String>Burn 300</String></Setting>
                </Guidance:Execute>
                <Syslog Severity="Critical">Dropped weight due to communications timeout.</Syslog>
            </Timeout>
            <Universal:platform_communications/>
        </ReadDatum>

        <Guidance:Wait>
            <Sequence/>
            <Setting><Guidance:Wait.duration/><Units:minute/><Value>5</Value></Setting>
        </Guidance:Wait>

        <Assign><Sequence/><Arg Name="ElapsedSinceDefaultStarted"/><Elapsed><Universal:mission_started/></Elapsed></Assign>

        <Syslog Severity="Important">Default mission has been running for <Arg Name="ElapsedSinceDefaultStarted"/><Units:minute/></Syslog>

    </Aggregate>

    <Syslog Severity="Important">Restarting logs and Default mission.</Syslog>

    <Guidance:Execute>
        <Sequence/>
        <Setting><Guidance:Execute.command/><String>restart logs</String></Setting>
    </Guidance:Execute>

</Mission>


2015-09-29T15:02:29.294Z,1443538949.294 [controlThread](DEBUG): Component order: CycleStarter,InternalSim,ISUS,PAR_Licor,AHRS_sp3003D,DataOverHttps,Depth_Keller,DropWeight,DVL_micro,NAL9602,Onboard,DAT,SCPI,PAR_Licor,Depth_Keller,DepthRateCalculator,PitchRateCalculator,SpeedCalculator,TempGradientCalculator,VerticalTemperatureHomogeneityIndexCalculator,YawRateCalculator,StratificationFrontDetector,DeadReckonUsingMultipleVelocitySources,DeadReckonUsingSpeedCalculator,NavChart,UniversalFixResidualReporter,MissionManager,VerticalControl,HorizontalControl,SpeedControl,LoopControl,BuoyancyServo,ElevatorServo,MassServo,RudderServo,ThrusterServo,SBIT,IBIT,CBIT,Reporter,LogSplitter,
2015-09-29T15:02:29.539Z,1443538949.539 [DVL_micro](INFO): Initializing
2015-09-29T15:02:29.712Z,1443538949.712 [DeadReckonUsingMultipleVelocitySources](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T15:02:29.727Z,1443538949.727 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T15:02:29.852Z,1443538949.852 [BuoyancyServo](DEBUG): Initializing BuoyancyServo.
2015-09-29T15:02:29.862Z,1443538949.862 [ElevatorServo](DEBUG): Initializing ElevatorServo.
2015-09-29T15:02:29.879Z,1443538949.879 [MassServo](DEBUG): Initializing MassServo.
2015-09-29T15:02:29.885Z,1443538949.885 [RudderServo](DEBUG): Initializing RudderServo.
2015-09-29T15:02:29.904Z,1443538949.904 [ThrusterServo](DEBUG): Initializing ThrusterServo.
2015-09-29T15:02:30.166Z,1443538950.166 [DeadReckonUsingMultipleVelocitySources](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T15:02:30.167Z,1443538950.167 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T15:02:39.004Z,1443538959.004 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T15:02:39.348Z,1443538959.348 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T15:02:39.470Z,1443538959.470 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T15:02:39.863Z,1443538959.863 [DataOverHttps](INFO): setting available, lastComms_.elapsed()=0.003000
2015-09-29T15:02:39.866Z,1443538959.866 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T15:02:40.261Z,1443538960.261 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T15:02:40.661Z,1443538960.661 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T15:02:41.061Z,1443538961.061 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T15:02:41.460Z,1443538961.460 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T15:02:41.860Z,1443538961.860 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T15:02:42.280Z,1443538962.280 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T15:02:42.659Z,1443538962.659 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T15:02:43.061Z,1443538963.061 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T15:02:43.460Z,1443538963.460 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T15:02:43.860Z,1443538963.860 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T15:02:44.260Z,1443538964.260 [NAL9602](INFO): No messages in MT queue
2015-09-29T15:02:44.261Z,1443538964.261 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T15:02:44.660Z,1443538964.660 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T15:02:45.060Z,1443538965.060 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T15:02:45.460Z,1443538965.460 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T15:02:45.860Z,1443538965.860 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T15:02:46.260Z,1443538966.260 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T15:02:46.660Z,1443538966.660 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T15:02:47.060Z,1443538967.060 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T15:02:47.461Z,1443538967.461 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T15:02:47.860Z,1443538967.860 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T15:02:48.260Z,1443538968.260 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T15:02:48.660Z,1443538968.660 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T15:02:49.060Z,1443538969.060 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T15:02:49.460Z,1443538969.460 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T15:02:49.473Z,1443538969.473 [SBIT](IMPORTANT): Beginning Startup BIT
2015-09-29T15:02:49.861Z,1443538969.861 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T15:02:50.260Z,1443538970.260 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T15:02:50.660Z,1443538970.660 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T15:02:51.061Z,1443538971.061 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T15:02:51.460Z,1443538971.460 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T15:02:51.861Z,1443538971.861 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T15:02:52.261Z,1443538972.261 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T15:02:52.660Z,1443538972.660 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T15:02:53.060Z,1443538973.060 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T15:02:53.460Z,1443538973.460 [D