2015-09-29T14:30:42.267Z,1443537042.267 [Supervisor](DEBUG): Initializing supervisor.
2015-09-29T14:30:42.273Z,1443537042.273 [SyncHandler](DEBUG): Created PCaller Thread at 4034C4E0
2015-09-29T14:30:42.273Z,1443537042.273 [SyncHandler](INFO): Protected caller Thread ID is 761
2015-09-29T14:30:42.274Z,1443537042.274 [ComponentRegistry](DEBUG): Component "controlThread" handled in its own thread.
2015-09-29T14:30:42.277Z,1443537042.277 [controlThread ThreadHandler](DEBUG): Created PCaller Thread at 4037C4E0
2015-09-29T14:30:42.277Z,1443537042.277 [controlThread ThreadHandler](INFO): Protected caller Thread ID is 762
2015-09-29T14:30:42.280Z,1443537042.280 [ComponentRegistry](DEBUG): SyncComponent "CycleStarter" handled in the control thread.
2015-09-29T14:30:42.292Z,1443537042.292 [ComponentRegistry](DEBUG): Component "CommandLine" handled in its own thread.
2015-09-29T14:30:42.297Z,1443537042.297 [CommandLine ThreadHandler](DEBUG): Created PCaller Thread at 403AC4E0
2015-09-29T14:30:42.297Z,1443537042.297 [CommandLine ThreadHandler](INFO): Protected caller Thread ID is 763
2015-09-29T14:30:42.298Z,1443537042.298 [ComponentRegistry](DEBUG): Component "logger" handled in its own thread.
2015-09-29T14:30:42.301Z,1443537042.301 [logger ThreadHandler](DEBUG): Created PCaller Thread at 403DC4E0
2015-09-29T14:30:42.301Z,1443537042.301 [logger ThreadHandler](INFO): Protected caller Thread ID is 764
2015-09-29T14:30:42.303Z,1443537042.303 [ComponentRegistry](DEBUG): SyncComponent "LogSplitter" handled in the control thread.
2015-09-29T14:30:42.304Z,1443537042.304 [Supervisor](INFO): Looking for Config files in directory: Config/
2015-09-29T14:30:42.307Z,1443537042.307 [Supervisor](INFO): Opening Config file at: Config/Control.cfg
2015-09-29T14:30:42.716Z,1443537042.716 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Control
2015-09-29T14:30:42.718Z,1443537042.718 [Supervisor](INFO): Opening Config file at: Config/BIT.cfg
2015-09-29T14:30:42.909Z,1443537042.909 [ComponentRegistry](DEBUG): Loaded Config Component "Config/BIT
2015-09-29T14:30:42.911Z,1443537042.911 [Supervisor](INFO): Opening Config file at: Config/Derivation.cfg
2015-09-29T14:30:43.057Z,1443537043.057 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Derivation
2015-09-29T14:30:43.058Z,1443537043.058 [Supervisor](INFO): Opening Config file at: Config/Estimation.cfg
2015-09-29T14:30:43.206Z,1443537043.206 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Estimation
2015-09-29T14:30:43.206Z,1443537043.206 [Supervisor](INFO): Opening Config file at: Config/Guidance.cfg
2015-09-29T14:30:43.302Z,1443537043.302 [Supervisor](INFO): Opening Config file at: Config/Navigation.cfg
2015-09-29T14:30:43.525Z,1443537043.525 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Navigation
2015-09-29T14:30:43.526Z,1443537043.526 [Supervisor](INFO): Opening Config file at: Config/Sample.cfg
2015-09-29T14:30:43.625Z,1443537043.625 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Sample
2015-09-29T14:30:43.626Z,1443537043.626 [Supervisor](INFO): Opening Config file at: Config/Science.cfg
2015-09-29T14:30:43.946Z,1443537043.946 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Science
2015-09-29T14:30:43.946Z,1443537043.946 [Supervisor](INFO): Opening Config file at: Config/Sensor.cfg
2015-09-29T14:30:44.350Z,1443537044.350 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Sensor
2015-09-29T14:30:44.350Z,1443537044.350 [Supervisor](INFO): Opening Config file at: Config/Servo.cfg
2015-09-29T14:30:44.715Z,1443537044.715 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Servo
2015-09-29T14:30:44.717Z,1443537044.717 [Supervisor](INFO): Opening Config file at: Config/Simulator.cfg
2015-09-29T14:30:45.318Z,1443537045.318 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Simulator
2015-09-29T14:30:45.319Z,1443537045.319 [Supervisor](INFO): Opening Config file at: Config/logger.cfg
2015-09-29T14:30:45.558Z,1443537045.558 [ComponentRegistry](DEBUG): Loaded Config Component "Config/logger
2015-09-29T14:30:45.559Z,1443537045.559 [Supervisor](INFO): Opening Config file at: Config/secure.cfg
2015-09-29T14:30:45.673Z,1443537045.673 [ComponentRegistry](DEBUG): Loaded Config Component "Config/secure
2015-09-29T14:30:45.674Z,1443537045.674 [Supervisor](INFO): Opening Config file at: Config/vehicle.cfg
2015-09-29T14:30:46.199Z,1443537046.199 [ComponentRegistry](DEBUG): Loaded Config Component "Config/vehicle
2015-09-29T14:30:46.200Z,1443537046.200 [Supervisor](INFO): Opening Config file at: Config/workSite.cfg
2015-09-29T14:30:46.372Z,1443537046.372 [ComponentRegistry](DEBUG): Loaded Config Component "Config/workSite
2015-09-29T14:30:46.374Z,1443537046.374 [Supervisor](INFO): Looking for Config files in directory: Config/(none)/
2015-09-29T14:30:46.374Z,1443537046.374 [Supervisor](FAULT): Ignoring configuration overrides from Data/persisted.cfg
2015-09-29T14:30:46.379Z,1443537046.379 [Module Loader](DEBUG): Loading Module at Modules/Control.so
2015-09-29T14:30:46.453Z,1443537046.453 [VerticalControl](DEBUG): Construct VerticalControl.
2015-09-29T14:30:46.587Z,1443537046.587 [VerticalControl] Loaded
2015-09-29T14:30:46.587Z,1443537046.587 [ComponentRegistry](DEBUG): SyncComponent "VerticalControl" handled in the control thread.
2015-09-29T14:30:46.588Z,1443537046.588 [HorizontalControl](DEBUG): Construct HorizontalControl.
2015-09-29T14:30:46.670Z,1443537046.670 [HorizontalControl] Loaded
2015-09-29T14:30:46.670Z,1443537046.670 [ComponentRegistry](DEBUG): SyncComponent "HorizontalControl" handled in the control thread.
2015-09-29T14:30:46.671Z,1443537046.671 [SpeedControl](DEBUG): Construct SpeedControl.
2015-09-29T14:30:46.681Z,1443537046.681 [SpeedControl] Loaded
2015-09-29T14:30:46.681Z,1443537046.681 [ComponentRegistry](DEBUG): SyncComponent "SpeedControl" handled in the control thread.
2015-09-29T14:30:46.682Z,1443537046.682 [LoopControl](DEBUG): Construct LoopControl.
2015-09-29T14:30:46.682Z,1443537046.682 [LoopControl] Loaded
2015-09-29T14:30:46.683Z,1443537046.683 [ComponentRegistry](DEBUG): SyncComponent "LoopControl" handled in the control thread.
2015-09-29T14:30:46.683Z,1443537046.683 [Module Loader](DEBUG): Loaded Module: Control (Contains the Control components, such as Depth, Heading, and Speed Control)
2015-09-29T14:30:46.684Z,1443537046.684 [Module Loader](DEBUG): Loading Module at Modules/BIT.so
2015-09-29T14:30:46.842Z,1443537046.842 [SBIT](DEBUG): Construct Startup Built In Test.
2015-09-29T14:30:46.859Z,1443537046.859 [SBIT] Loaded
2015-09-29T14:30:46.859Z,1443537046.859 [ComponentRegistry](DEBUG): SyncComponent "SBIT" handled in the control thread.
2015-09-29T14:30:46.860Z,1443537046.860 [IBIT](DEBUG): Construct Initiated Built In Test.
2015-09-29T14:30:46.890Z,1443537046.890 [IBIT] Loaded
2015-09-29T14:30:46.890Z,1443537046.890 [ComponentRegistry](DEBUG): SyncComponent "IBIT" handled in the control thread.
2015-09-29T14:30:46.892Z,1443537046.892 [CBIT](DEBUG): Construct Continuous Built In Test.
2015-09-29T14:30:47.047Z,1443537047.047 [CBIT] Loaded
2015-09-29T14:30:47.047Z,1443537047.047 [ComponentRegistry](DEBUG): SyncComponent "CBIT" handled in the control thread.
2015-09-29T14:30:47.048Z,1443537047.048 [Module Loader](DEBUG): Loaded Module: BIT (Contains the BuiltInTest components, such as C Built In Test)
2015-09-29T14:30:47.049Z,1443537047.049 [Module Loader](DEBUG): Loading Module at Modules/Derivation.so
2015-09-29T14:30:47.090Z,1443537047.090 [DepthRateCalculator] Loaded
2015-09-29T14:30:47.090Z,1443537047.090 [ComponentRegistry](DEBUG): SyncComponent "DepthRateCalculator" handled in the control thread.
2015-09-29T14:30:47.096Z,1443537047.096 [PitchRateCalculator] Loaded
2015-09-29T14:30:47.096Z,1443537047.096 [ComponentRegistry](DEBUG): SyncComponent "PitchRateCalculator" handled in the control thread.
2015-09-29T14:30:47.108Z,1443537047.108 [SpeedCalculator] Loaded
2015-09-29T14:30:47.108Z,1443537047.108 [ComponentRegistry](DEBUG): SyncComponent "SpeedCalculator" handled in the control thread.
2015-09-29T14:30:47.125Z,1443537047.125 [TempGradientCalculator] Loaded
2015-09-29T14:30:47.126Z,1443537047.126 [ComponentRegistry](DEBUG): SyncComponent "TempGradientCalculator" handled in the control thread.
2015-09-29T14:30:47.147Z,1443537047.147 [VerticalTemperatureHomogeneityIndexCalculator] Loaded
2015-09-29T14:30:47.147Z,1443537047.147 [ComponentRegistry](DEBUG): SyncComponent "VerticalTemperatureHomogeneityIndexCalculator" handled in the control thread.
2015-09-29T14:30:47.152Z,1443537047.152 [YawRateCalculator] Loaded
2015-09-29T14:30:47.157Z,1443537047.157 [ComponentRegistry](DEBUG): SyncComponent "YawRateCalculator" handled in the control thread.
2015-09-29T14:30:47.157Z,1443537047.157 [Module Loader](DEBUG): Loaded Module: Derivation (Contains the base derivation components)
2015-09-29T14:30:47.158Z,1443537047.158 [Module Loader](DEBUG): Loading Module at Modules/Estimation.so
2015-09-29T14:30:47.282Z,1443537047.282 [StratificationFrontDetector](INFO): threshold set to: 0.399988 degC
2015-09-29T14:30:47.282Z,1443537047.282 [StratificationFrontDetector](DEBUG): (re)initializing
2015-09-29T14:30:47.282Z,1443537047.282 [StratificationFrontDetector] Loaded
2015-09-29T14:30:47.282Z,1443537047.282 [ComponentRegistry](DEBUG): SyncComponent "StratificationFrontDetector" handled in the control thread.
2015-09-29T14:30:47.283Z,1443537047.283 [Module Loader](DEBUG): Loaded Module: Estimation (Contains the base estimation components)
2015-09-29T14:30:47.284Z,1443537047.284 [Module Loader](DEBUG): Loading Module at Modules/Guidance.so
2015-09-29T14:30:47.574Z,1443537047.574 [Module Loader](DEBUG): Loaded Module: Guidance (Contains behaviors and commands)
2015-09-29T14:30:47.575Z,1443537047.575 [Module Loader](DEBUG): Loading Module at Modules/Navigation.so
2015-09-29T14:30:47.708Z,1443537047.708 [DeadReckonUsingMultipleVelocitySources] Loaded
2015-09-29T14:30:47.708Z,1443537047.708 [ComponentRegistry](DEBUG): SyncComponent "DeadReckonUsingMultipleVelocitySources" handled in the control thread.
2015-09-29T14:30:47.769Z,1443537047.769 [DeadReckonUsingSpeedCalculator] Loaded
2015-09-29T14:30:47.769Z,1443537047.769 [ComponentRegistry](DEBUG): SyncComponent "DeadReckonUsingSpeedCalculator" handled in the control thread.
2015-09-29T14:30:47.791Z,1443537047.791 [NavChart] Loaded
2015-09-29T14:30:47.791Z,1443537047.791 [ComponentRegistry](DEBUG): SyncComponent "NavChart" handled in the control thread.
2015-09-29T14:30:47.796Z,1443537047.796 [UniversalFixResidualReporter] Loaded
2015-09-29T14:30:47.797Z,1443537047.797 [ComponentRegistry](DEBUG): SyncComponent "UniversalFixResidualReporter" handled in the control thread.
2015-09-29T14:30:47.797Z,1443537047.797 [Module Loader](DEBUG): Loaded Module: Navigation (Contains the base navigation components)
2015-09-29T14:30:47.798Z,1443537047.798 [Module Loader](DEBUG): Loading Module at Modules/Sample.so
2015-09-29T14:30:47.806Z,1443537047.806 [Module Loader](DEBUG): Loaded Module: Sample (This is a Sample Module of Sample Components)
2015-09-29T14:30:47.807Z,1443537047.807 [Module Loader](DEBUG): Loading Module at Modules/Science.so
2015-09-29T14:30:48.102Z,1443537048.102 [CTD_NeilBrown] Loaded
2015-09-29T14:30:48.102Z,1443537048.102 [ComponentRegistry](DEBUG): Component "CTD_NeilBrown" handled in its own thread.
2015-09-29T14:30:48.105Z,1443537048.105 [CTD_NeilBrown ThreadHandler](DEBUG): Created PCaller Thread at 4059D4E0
2015-09-29T14:30:48.105Z,1443537048.105 [CTD_NeilBrown ThreadHandler](INFO): Protected caller Thread ID is 810
2015-09-29T14:30:48.118Z,1443537048.118 [ISUS] Loaded
2015-09-29T14:30:48.118Z,1443537048.118 [ComponentRegistry](DEBUG): SyncComponent "ISUS" handled in the control thread.
2015-09-29T14:30:48.137Z,1443537048.137 [PAR_Licor] Loaded
2015-09-29T14:30:48.137Z,1443537048.137 [ComponentRegistry](DEBUG): SyncComponent "PAR_Licor" handled in the control thread.
2015-09-29T14:30:48.193Z,1443537048.193 [WetLabsBB2FL] Loaded
2015-09-29T14:30:48.194Z,1443537048.194 [ComponentRegistry](DEBUG): Component "WetLabsBB2FL" handled in its own thread.
2015-09-29T14:30:48.197Z,1443537048.197 [WetLabsBB2FL ThreadHandler](DEBUG): Created PCaller Thread at 405CD4E0
2015-09-29T14:30:48.197Z,1443537048.197 [WetLabsBB2FL ThreadHandler](INFO): Protected caller Thread ID is 811
2015-09-29T14:30:48.198Z,1443537048.198 [Module Loader](DEBUG): Loaded Module: Science (Contains the science components)
2015-09-29T14:30:48.198Z,1443537048.198 [Module Loader](DEBUG): Loading Module at Modules/Sensor.so
2015-09-29T14:30:48.932Z,1443537048.932 [AHRS_sp3003D] Loaded
2015-09-29T14:30:48.932Z,1443537048.932 [ComponentRegistry](DEBUG): SyncComponent "AHRS_sp3003D" handled in the control thread.
2015-09-29T14:30:49.126Z,1443537049.126 [DataOverHttps] Loaded
2015-09-29T14:30:49.127Z,1443537049.127 [ComponentRegistry](DEBUG): SyncComponent "DataOverHttps" handled in the control thread.
2015-09-29T14:30:49.140Z,1443537049.140 [Depth_Keller] Loaded
2015-09-29T14:30:49.145Z,1443537049.145 [ComponentRegistry](DEBUG): SyncComponent "Depth_Keller" handled in the control thread.
2015-09-29T14:30:49.150Z,1443537049.150 [DropWeight] Loaded
2015-09-29T14:30:49.150Z,1443537049.150 [ComponentRegistry](DEBUG): SyncComponent "DropWeight" handled in the control thread.
2015-09-29T14:30:49.303Z,1443537049.303 [DVL_micro] Loaded
2015-09-29T14:30:49.303Z,1443537049.303 [ComponentRegistry](DEBUG): SyncComponent "DVL_micro" handled in the control thread.
2015-09-29T14:30:49.411Z,1443537049.411 [NAL9602] Loaded
2015-09-29T14:30:49.412Z,1443537049.412 [ComponentRegistry](DEBUG): SyncComponent "NAL9602" handled in the control thread.
2015-09-29T14:30:49.459Z,1443537049.459 [Onboard] Loaded
2015-09-29T14:30:49.459Z,1443537049.459 [ComponentRegistry](DEBUG): SyncComponent "Onboard" handled in the control thread.
2015-09-29T14:30:49.471Z,1443537049.471 [Radio_Surface] Loaded
2015-09-29T14:30:49.471Z,1443537049.471 [ComponentRegistry](DEBUG): Component "Radio_Surface" handled in its own thread.
2015-09-29T14:30:49.473Z,1443537049.473 [Radio_Surface ThreadHandler](DEBUG): Created PCaller Thread at 408114E0
2015-09-29T14:30:49.473Z,1443537049.473 [Radio_Surface ThreadHandler](INFO): Protected caller Thread ID is 812
2015-09-29T14:30:49.632Z,1443537049.632 [DAT] Loaded
2015-09-29T14:30:49.632Z,1443537049.632 [ComponentRegistry](DEBUG): SyncComponent "DAT" handled in the control thread.
2015-09-29T14:30:49.639Z,1443537049.639 [SCPI] Loaded
2015-09-29T14:30:49.639Z,1443537049.639 [ComponentRegistry](DEBUG): SyncComponent "SCPI" handled in the control thread.
2015-09-29T14:30:49.640Z,1443537049.640 [Module Loader](DEBUG): Loaded Module: Sensor (Contains the sensor components)
2015-09-29T14:30:49.641Z,1443537049.641 [Module Loader](DEBUG): Loading Module at Modules/Servo.so
2015-09-29T14:30:49.770Z,1443537049.770 [BuoyancyServo] Loaded
2015-09-29T14:30:49.771Z,1443537049.771 [ComponentRegistry](DEBUG): SyncComponent "BuoyancyServo" handled in the control thread.
2015-09-29T14:30:49.788Z,1443537049.788 [ElevatorServo] Loaded
2015-09-29T14:30:49.788Z,1443537049.788 [ComponentRegistry](DEBUG): SyncComponent "ElevatorServo" handled in the control thread.
2015-09-29T14:30:49.800Z,1443537049.800 [MassServo] Loaded
2015-09-29T14:30:49.800Z,1443537049.800 [ComponentRegistry](DEBUG): SyncComponent "MassServo" handled in the control thread.
2015-09-29T14:30:49.812Z,1443537049.812 [RudderServo] Loaded
2015-09-29T14:30:49.812Z,1443537049.812 [ComponentRegistry](DEBUG): SyncComponent "RudderServo" handled in the control thread.
2015-09-29T14:30:49.828Z,1443537049.828 [ThrusterServo] Loaded
2015-09-29T14:30:49.828Z,1443537049.828 [ComponentRegistry](DEBUG): SyncComponent "ThrusterServo" handled in the control thread.
2015-09-29T14:30:49.829Z,1443537049.829 [Module Loader](DEBUG): Loaded Module: Servo (This is the module containing motor controllers)
2015-09-29T14:30:49.829Z,1443537049.829 [Module Loader](DEBUG): Loading Module at Modules/Simulator.so
2015-09-29T14:30:50.029Z,1443537050.029 [InternalSim] Loaded
2015-09-29T14:30:50.029Z,1443537050.029 [ComponentRegistry](DEBUG): SyncComponent "InternalSim" handled in the control thread.
2015-09-29T14:30:50.029Z,1443537050.029 [Module Loader](DEBUG): Loaded Module: Simulator (This is the module containing the Simulator)
2015-09-29T14:30:50.030Z,1443537050.030 [Module Loader](DEBUG): Loading Module at Modules/Trigger.so
2015-09-29T14:30:50.073Z,1443537050.073 [Module Loader](DEBUG): Loaded Module: Trigger (Contains triggers for use in missions)
2015-09-29T14:30:50.078Z,1443537050.078 [ComponentRegistry](DEBUG): SyncComponent "MissionManager" handled in the control thread.
2015-09-29T14:30:50.079Z,1443537050.079 [ComponentRegistry](DEBUG): SyncComponent "Reporter" handled in the control thread.
2015-09-29T14:30:50.085Z,1443537050.085 [ComponentRegistry](DEBUG): Component "NavChartDb" handled in its own thread.
2015-09-29T14:30:50.089Z,1443537050.089 [NavChartDb ThreadHandler](DEBUG): Created PCaller Thread at 408BF4E0
2015-09-29T14:30:50.089Z,1443537050.089 [NavChartDb ThreadHandler](INFO): Protected caller Thread ID is 813
2015-09-29T14:30:50.094Z,1443537050.094 [Supervisor](INFO): Main Thread ID is 760
2015-09-29T14:30:50.094Z,1443537050.094 [Supervisor](DEBUG): Running supervisor.
2015-09-29T14:30:50.095Z,1443537050.095 [CommandLine ThreadHandler](INFO): Handler Thread ID is 814
2015-09-29T14:30:50.101Z,1443537050.101 [controlThread ThreadHandler](INFO): Handler Thread ID is 815
2015-09-29T14:30:50.102Z,1443537050.102 [controlThread](DEBUG): Initializing ControlThread
2015-09-29T14:30:50.103Z,1443537050.103 [VerticalControl](DEBUG): Initialize VerticalControlComponent.
2015-09-29T14:30:50.104Z,1443537050.104 [HorizontalControl](DEBUG): Initialize HorizontalControlComponent.
2015-09-29T14:30:50.105Z,1443537050.105 [SpeedControl](DEBUG): Initialize SpeedControlComponent.
2015-09-29T14:30:50.106Z,1443537050.106 [LoopControl](DEBUG): Initialize LoopControlComponent.
2015-09-29T14:30:50.106Z,1443537050.106 [SBIT](INFO): Initialize SBIT Component.
2015-09-29T14:30:50.107Z,1443537050.107 [SBIT](IMPORTANT): Tethys CM Info: SVN revision:12634
2015-09-29T14:30:50.108Z,1443537050.108 [SBIT](INFO): Kernel Reporting Different Release From Configuration.
Kernel Expected: 2.6.32-45-generic-pae
Kernel Reported: 2.6.27.8
2015-09-29T14:30:50.108Z,1443537050.108 [SBIT](INFO): Kernel Reporting Different Version From Configuration.
Kernel Expected: #102-Ubuntu SMP Wed Jan 2 22:10:16 UTC 2013
Kernel Reported: #641 PREEMPT Mon Sep 28 16:45:10 PDT 2015
2015-09-29T14:30:50.109Z,1443537050.109 [SBIT](INFO): Beginning SBIT in 20.000000 seconds.
2015-09-29T14:30:50.110Z,1443537050.110 [IBIT](INFO): Initialize IBIT Component.
2015-09-29T14:30:50.111Z,1443537050.111 [CBIT](DEBUG): Initialize CBIT Component.
2015-09-29T14:30:50.111Z,1443537050.111 [CBIT](FAULT): LAST RESTART WAS UNINTENTIONAL.
2015-09-29T14:30:50.111Z,1443537050.111 [CBIT](INFO): Last reboot was NOT due to watchdog timer.
2015-09-29T14:30:50.111Z,1443537050.111 [DepthRateCalculator](DEBUG): Initializing DepthRateCalculator.
2015-09-29T14:30:50.112Z,1443537050.112 [PitchRateCalculator](DEBUG): Initializing PitchRateCalculator.
2015-09-29T14:30:50.112Z,1443537050.112 [SpeedCalculator](DEBUG): Initializing SpeedCalculator.
2015-09-29T14:30:50.112Z,1443537050.112 [TempGradientCalculator](DEBUG): Initializing TempGradientCalculator.
2015-09-29T14:30:50.113Z,1443537050.113 [VerticalTemperatureHomogeneityIndexCalculator](DEBUG): (re)initializing
2015-09-29T14:30:50.114Z,1443537050.114 [YawRateCalculator](DEBUG): Initializing YawRateCalculator.
2015-09-29T14:30:50.114Z,1443537050.114 [DeadReckonUsingMultipleVelocitySources](DEBUG): Initializing DeadReckonUsingMultipleVelocitySources component.
2015-09-29T14:30:50.115Z,1443537050.115 [DeadReckonUsingMultipleVelocitySources](INFO): Will consider orientation measurement stale after 120s.
2015-09-29T14:30:50.115Z,1443537050.115 [DeadReckonUsingMultipleVelocitySources](INFO): Will consider velocity measurement stale after 20s.
2015-09-29T14:30:50.116Z,1443537050.116 [DeadReckonUsingSpeedCalculator](DEBUG): Initializing DeadReckonUsingSpeedCalculator component.
2015-09-29T14:30:50.116Z,1443537050.116 [DeadReckonUsingSpeedCalculator](INFO): Will consider orientation measurement stale after 120s.
2015-09-29T14:30:50.116Z,1443537050.116 [DeadReckonUsingSpeedCalculator](INFO): Will consider velocity measurement stale after 20s.
2015-09-29T14:30:50.117Z,1443537050.117 [NavChart](DEBUG): Initialize NavChart Navigation.
2015-09-29T14:30:50.117Z,1443537050.117 [UniversalFixResidualReporter](DEBUG): Initializing UniversalFixResidualReporter component.
2015-09-29T14:30:50.122Z,1443537050.122 [InternalSim](DEBUG):  InternalSim initializing...
2015-09-29T14:30:50.158Z,1443537050.158 [logger ThreadHandler](INFO): Handler Thread ID is 816
2015-09-29T14:30:50.207Z,1443537050.207 [CTD_NeilBrown ThreadHandler](INFO): Handler Thread ID is 817
2015-09-29T14:30:50.213Z,1443537050.213 [WetLabsBB2FL ThreadHandler](INFO): Handler Thread ID is 818
2015-09-29T14:30:50.225Z,1443537050.225 [Radio_Surface ThreadHandler](INFO): Handler Thread ID is 819
2015-09-29T14:30:50.305Z,1443537050.305 [NavChartDb ThreadHandler](INFO): Handler Thread ID is 820
2015-09-29T14:30:50.312Z,1443537050.312 [NavChartDb](INFO): Looking for Electronic Nav Chart files in directory: Resources
2015-09-29T14:30:50.315Z,1443537050.315 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US1WC07M.000
2015-09-29T14:30:50.315Z,1443537050.315 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US2WC11M.000
2015-09-29T14:30:50.315Z,1443537050.315 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US3CA52M.000
2015-09-29T14:30:50.315Z,1443537050.315 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US4CA60M.000
2015-09-29T14:30:50.316Z,1443537050.316 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA50M.000
2015-09-29T14:30:50.316Z,1443537050.316 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA61M.000
2015-09-29T14:30:50.316Z,1443537050.316 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA62M.000
2015-09-29T14:30:50.316Z,1443537050.316 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA83M.000
2015-09-29T14:30:50.333Z,1443537050.333 [MissionManager](INFO): Loading Mission: Missions/Startup.xml
2015-09-29T14:30:50.397Z,1443537050.397 [Startup:A.GoToSurface](DEBUG): Construct GoToSurface.
2015-09-29T14:30:50.407Z,1443537050.407 [MissionManager](DEBUG): 
<?xml version="1.0" encoding="UTF-8"?>
<Mission xmlns="Tethys"
       xmlns:Control="Tethys/Control"
       xmlns:Guidance="Tethys/Guidance" 
       xmlns:Units="Tethys/Units"
       xmlns:Universal="Tethys/Universal"
       xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
       xsi:schemaLocation="Tethys http://okeanids.mbari.org/tethys/Xml/Tethys.xsd
                           Tethys/Control http://okeanids.mbari.org/tethys/Xml/Control.xsd
                           Tethys/Guidance http://okeanids.mbari.org/tethys/Xml/Guidance.xsd
                           Tethys/Units http://okeanids.mbari.org/tethys/Xml/Units.xsd
                           Tethys/Universal http://okeanids.mbari.org/tethys/Xml/Universal.xsd"
       Id="Startup">

    <Guidance:GoToSurface>
        <Progression/>
    </Guidance:GoToSurface>

    <Aggregate Id="StartupSatComms">

        <Sequence/>

        <ReadDatum>
            <Timeout Duration="P1M" />
            <Universal:latitude_fix/>
        </ReadDatum>

        <ReadDatum>
            <Timeout Duration="P1M" />
            <Universal:platform_communications/>
        </ReadDatum>

    </Aggregate>

</Mission>


2015-09-29T14:30:50.408Z,1443537050.408 [MissionManager](INFO): Loading Mission: Missions/Default.xml
2015-09-29T14:30:50.477Z,1443537050.477 [MissionManager](INFO): DefineArg Default.ElapsedSinceDefaultStarted = 0.000000 min
2015-09-29T14:30:50.478Z,1443537050.478 [Default:A.GoToSurface](DEBUG): Construct GoToSurface.
2015-09-29T14:30:50.512Z,1443537050.512 [Default:CheckIn:Read_Iridium:A_Timeout:A.Execute](DEBUG): Construct Execute.
2015-09-29T14:30:50.532Z,1443537050.532 [Default:CheckIn:C.Wait](DEBUG): Construct Wait.
2015-09-29T14:30:50.554Z,1443537050.554 [Default:D.Execute](DEBUG): Construct Execute.
2015-09-29T14:30:50.557Z,1443537050.557 [MissionManager](DEBUG): 
<?xml version="1.0" encoding="UTF-8"?>
<Mission xmlns="Tethys"
xmlns:Guidance="Tethys/Guidance"
xmlns:Units="Tethys/Units"
xmlns:Universal="Tethys/Universal"
xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
xsi:schemaLocation="Tethys http://okeanids.mbari.org/tethys/Xml/Tethys.xsd
Tethys/Guidance http://okeanids.mbari.org/tethys/Xml/Guidance.xsd
Tethys/Units http://okeanids.mbari.org/tethys/Xml/Units.xsd
Tethys/Universal http://okeanids.mbari.org/tethys/Xml/Universal.xsd"
Id="Default">

    <DefineArg Name="ElapsedSinceDefaultStarted"><Units:minute/><Value>0</Value></DefineArg>

    <Guidance:GoToSurface>
        <Progression/>
    </Guidance:GoToSurface>

    <Aggregate Id="CheckIn">

        <Sequence Repeat="288"/>

        <ReadDatum Id="Read_GPS">
            <Sequence/>
            <Timeout Duration="P5M"/>
            <Universal:time_fix/>
        </ReadDatum>

        <ReadDatum Id="Read_Iridium">
            <Sequence/>
            <Timeout Duration="P2H">
                <Guidance:Execute>
                    <Sequence/>
                    <Setting><Guidance:Execute.command/><String>Burn 300</String></Setting>
                </Guidance:Execute>
                <Syslog Severity="Critical">Dropped weight due to communications timeout.</Syslog>
            </Timeout>
            <Universal:platform_communications/>
        </ReadDatum>

        <Guidance:Wait>
            <Sequence/>
            <Setting><Guidance:Wait.duration/><Units:minute/><Value>5</Value></Setting>
        </Guidance:Wait>

        <Assign><Sequence/><Arg Name="ElapsedSinceDefaultStarted"/><Elapsed><Universal:mission_started/></Elapsed></Assign>

        <Syslog Severity="Important">Default mission has been running for <Arg Name="ElapsedSinceDefaultStarted"/><Units:minute/></Syslog>

    </Aggregate>

    <Syslog Severity="Important">Restarting logs and Default mission.</Syslog>

    <Guidance:Execute>
        <Sequence/>
        <Setting><Guidance:Execute.command/><String>restart logs</String></Setting>
    </Guidance:Execute>

</Mission>


2015-09-29T14:30:50.567Z,1443537050.567 [controlThread](DEBUG): Component order: CycleStarter,InternalSim,ISUS,PAR_Licor,AHRS_sp3003D,DataOverHttps,Depth_Keller,DropWeight,DVL_micro,NAL9602,Onboard,DAT,SCPI,PAR_Licor,Depth_Keller,DepthRateCalculator,PitchRateCalculator,SpeedCalculator,TempGradientCalculator,VerticalTemperatureHomogeneityIndexCalculator,YawRateCalculator,StratificationFrontDetector,DeadReckonUsingMultipleVelocitySources,DeadReckonUsingSpeedCalculator,NavChart,UniversalFixResidualReporter,MissionManager,VerticalControl,HorizontalControl,SpeedControl,LoopControl,BuoyancyServo,ElevatorServo,MassServo,RudderServo,ThrusterServo,SBIT,IBIT,CBIT,Reporter,LogSplitter,
2015-09-29T14:30:50.796Z,1443537050.796 [DVL_micro](INFO): Initializing
2015-09-29T14:30:50.969Z,1443537050.969 [DeadReckonUsingMultipleVelocitySources](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T14:30:50.976Z,1443537050.976 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T14:30:51.111Z,1443537051.111 [BuoyancyServo](DEBUG): Initializing BuoyancyServo.
2015-09-29T14:30:51.137Z,1443537051.137 [ElevatorServo](DEBUG): Initializing ElevatorServo.
2015-09-29T14:30:51.149Z,1443537051.149 [MassServo](DEBUG): Initializing MassServo.
2015-09-29T14:30:51.166Z,1443537051.166 [RudderServo](DEBUG): Initializing RudderServo.
2015-09-29T14:30:51.177Z,1443537051.177 [ThrusterServo](DEBUG): Initializing ThrusterServo.
2015-09-29T14:30:51.440Z,1443537051.440 [DeadReckonUsingMultipleVelocitySources](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T14:30:51.458Z,1443537051.458 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T14:31:00.422Z,1443537060.422 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T14:31:00.756Z,1443537060.756 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T14:31:00.899Z,1443537060.899 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T14:31:01.300Z,1443537061.300 [DataOverHttps](INFO): setting available, lastComms_.elapsed()=0.003000
2015-09-29T14:31:01.304Z,1443537061.304 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T14:31:01.698Z,1443537061.698 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T14:31:02.099Z,1443537062.099 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T14:31:02.498Z,1443537062.498 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T14:31:02.898Z,1443537062.898 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T14:31:03.298Z,1443537063.298 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T14:31:03.697Z,1443537063.697 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T14:31:04.097Z,1443537064.097 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T14:31:04.498Z,1443537064.498 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T14:31:04.898Z,1443537064.898 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T14:31:05.298Z,1443537065.298 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T14:31:05.697Z,1443537065.697 [NAL9602](INFO): No messages in MT queue
2015-09-29T14:31:05.698Z,1443537065.698 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T14:31:06.098Z,1443537066.098 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T14:31:06.497Z,1443537066.497 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T14:31:06.897Z,1443537066.897 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T14:31:07.300Z,1443537067.300 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T14:31:07.697Z,1443537067.697 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T14:31:08.098Z,1443537068.098 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T14:31:08.498Z,1443537068.498 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T14:31:08.897Z,1443537068.897 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T14:31:09.298Z,1443537069.298 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T14:31:09.699Z,1443537069.699 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T14:31:10.098Z,1443537070.098 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T14:31:10.498Z,1443537070.498 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T14:31:10.513Z,1443537070.513 [SBIT](IMPORTANT): Beginning Startup BIT
2015-09-29T14:31:10.897Z,1443537070.897 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T14:31:11.298Z,1443537071.298 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T14:31:11.698Z,1443537071.698 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T14:31:12.097Z,1443537072.097 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T14:31:12.497Z,1443537072.497 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T14:31:12.899Z,1443537072.899 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T14:31:13.299Z,1443537073.299 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T14:31:13.698Z,1443537073.698 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T14:31:14.099Z,1443537074.099 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T14:31:14.497Z,1443537074.497 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T14:31:14.897Z,1443537074.897 [D