2015-09-29T14:22:49.856Z,1443536569.856 [Supervisor](DEBUG): Initializing supervisor.
2015-09-29T14:22:49.859Z,1443536569.859 [SyncHandler](DEBUG): Created PCaller Thread at 4034C4E0
2015-09-29T14:22:49.859Z,1443536569.859 [SyncHandler](INFO): Protected caller Thread ID is 761
2015-09-29T14:22:49.860Z,1443536569.860 [ComponentRegistry](DEBUG): Component "controlThread" handled in its own thread.
2015-09-29T14:22:49.862Z,1443536569.862 [controlThread ThreadHandler](DEBUG): Created PCaller Thread at 4037C4E0
2015-09-29T14:22:49.863Z,1443536569.863 [controlThread ThreadHandler](INFO): Protected caller Thread ID is 762
2015-09-29T14:22:49.866Z,1443536569.866 [ComponentRegistry](DEBUG): SyncComponent "CycleStarter" handled in the control thread.
2015-09-29T14:22:49.878Z,1443536569.878 [ComponentRegistry](DEBUG): Component "CommandLine" handled in its own thread.
2015-09-29T14:22:49.882Z,1443536569.882 [CommandLine ThreadHandler](DEBUG): Created PCaller Thread at 403AC4E0
2015-09-29T14:22:49.883Z,1443536569.883 [CommandLine ThreadHandler](INFO): Protected caller Thread ID is 763
2015-09-29T14:22:49.884Z,1443536569.884 [ComponentRegistry](DEBUG): Component "logger" handled in its own thread.
2015-09-29T14:22:49.886Z,1443536569.886 [logger ThreadHandler](DEBUG): Created PCaller Thread at 403DC4E0
2015-09-29T14:22:49.887Z,1443536569.887 [logger ThreadHandler](INFO): Protected caller Thread ID is 764
2015-09-29T14:22:49.889Z,1443536569.889 [ComponentRegistry](DEBUG): SyncComponent "LogSplitter" handled in the control thread.
2015-09-29T14:22:49.889Z,1443536569.889 [Supervisor](INFO): Looking for Config files in directory: Config/
2015-09-29T14:22:49.893Z,1443536569.893 [Supervisor](INFO): Opening Config file at: Config/Control.cfg
2015-09-29T14:22:50.279Z,1443536570.279 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Control
2015-09-29T14:22:50.283Z,1443536570.283 [Supervisor](INFO): Opening Config file at: Config/BIT.cfg
2015-09-29T14:22:50.471Z,1443536570.471 [ComponentRegistry](DEBUG): Loaded Config Component "Config/BIT
2015-09-29T14:22:50.473Z,1443536570.473 [Supervisor](INFO): Opening Config file at: Config/Derivation.cfg
2015-09-29T14:22:50.619Z,1443536570.619 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Derivation
2015-09-29T14:22:50.620Z,1443536570.620 [Supervisor](INFO): Opening Config file at: Config/Estimation.cfg
2015-09-29T14:22:50.767Z,1443536570.767 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Estimation
2015-09-29T14:22:50.768Z,1443536570.768 [Supervisor](INFO): Opening Config file at: Config/Guidance.cfg
2015-09-29T14:22:50.862Z,1443536570.862 [Supervisor](INFO): Opening Config file at: Config/Navigation.cfg
2015-09-29T14:22:51.083Z,1443536571.083 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Navigation
2015-09-29T14:22:51.084Z,1443536571.084 [Supervisor](INFO): Opening Config file at: Config/Sample.cfg
2015-09-29T14:22:51.179Z,1443536571.179 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Sample
2015-09-29T14:22:51.180Z,1443536571.180 [Supervisor](INFO): Opening Config file at: Config/Science.cfg
2015-09-29T14:22:51.494Z,1443536571.494 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Science
2015-09-29T14:22:51.495Z,1443536571.495 [Supervisor](INFO): Opening Config file at: Config/Sensor.cfg
2015-09-29T14:22:51.896Z,1443536571.896 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Sensor
2015-09-29T14:22:51.896Z,1443536571.896 [Supervisor](INFO): Opening Config file at: Config/Servo.cfg
2015-09-29T14:22:52.252Z,1443536572.252 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Servo
2015-09-29T14:22:52.254Z,1443536572.254 [Supervisor](INFO): Opening Config file at: Config/Simulator.cfg
2015-09-29T14:22:52.856Z,1443536572.856 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Simulator
2015-09-29T14:22:52.857Z,1443536572.857 [Supervisor](INFO): Opening Config file at: Config/logger.cfg
2015-09-29T14:22:53.092Z,1443536573.092 [ComponentRegistry](DEBUG): Loaded Config Component "Config/logger
2015-09-29T14:22:53.092Z,1443536573.092 [Supervisor](INFO): Opening Config file at: Config/secure.cfg
2015-09-29T14:22:53.203Z,1443536573.203 [ComponentRegistry](DEBUG): Loaded Config Component "Config/secure
2015-09-29T14:22:53.204Z,1443536573.204 [Supervisor](INFO): Opening Config file at: Config/vehicle.cfg
2015-09-29T14:22:53.728Z,1443536573.728 [ComponentRegistry](DEBUG): Loaded Config Component "Config/vehicle
2015-09-29T14:22:53.729Z,1443536573.729 [Supervisor](INFO): Opening Config file at: Config/workSite.cfg
2015-09-29T14:22:53.855Z,1443536573.855 [ComponentRegistry](DEBUG): Loaded Config Component "Config/workSite
2015-09-29T14:22:53.857Z,1443536573.857 [Supervisor](INFO): Looking for Config files in directory: Config/(none)/
2015-09-29T14:22:53.857Z,1443536573.857 [Supervisor](FAULT): Ignoring configuration overrides from Data/persisted.cfg
2015-09-29T14:22:53.862Z,1443536573.862 [Module Loader](DEBUG): Loading Module at Modules/Control.so
2015-09-29T14:22:53.936Z,1443536573.936 [VerticalControl](DEBUG): Construct VerticalControl.
2015-09-29T14:22:54.069Z,1443536574.069 [VerticalControl] Loaded
2015-09-29T14:22:54.070Z,1443536574.070 [ComponentRegistry](DEBUG): SyncComponent "VerticalControl" handled in the control thread.
2015-09-29T14:22:54.071Z,1443536574.071 [HorizontalControl](DEBUG): Construct HorizontalControl.
2015-09-29T14:22:54.151Z,1443536574.151 [HorizontalControl] Loaded
2015-09-29T14:22:54.151Z,1443536574.151 [ComponentRegistry](DEBUG): SyncComponent "HorizontalControl" handled in the control thread.
2015-09-29T14:22:54.152Z,1443536574.152 [SpeedControl](DEBUG): Construct SpeedControl.
2015-09-29T14:22:54.158Z,1443536574.158 [SpeedControl] Loaded
2015-09-29T14:22:54.158Z,1443536574.158 [ComponentRegistry](DEBUG): SyncComponent "SpeedControl" handled in the control thread.
2015-09-29T14:22:54.159Z,1443536574.159 [LoopControl](DEBUG): Construct LoopControl.
2015-09-29T14:22:54.159Z,1443536574.159 [LoopControl] Loaded
2015-09-29T14:22:54.159Z,1443536574.159 [ComponentRegistry](DEBUG): SyncComponent "LoopControl" handled in the control thread.
2015-09-29T14:22:54.160Z,1443536574.160 [Module Loader](DEBUG): Loaded Module: Control (Contains the Control components, such as Depth, Heading, and Speed Control)
2015-09-29T14:22:54.161Z,1443536574.161 [Module Loader](DEBUG): Loading Module at Modules/BIT.so
2015-09-29T14:22:54.314Z,1443536574.314 [SBIT](DEBUG): Construct Startup Built In Test.
2015-09-29T14:22:54.330Z,1443536574.330 [SBIT] Loaded
2015-09-29T14:22:54.335Z,1443536574.335 [ComponentRegistry](DEBUG): SyncComponent "SBIT" handled in the control thread.
2015-09-29T14:22:54.335Z,1443536574.335 [IBIT](DEBUG): Construct Initiated Built In Test.
2015-09-29T14:22:54.365Z,1443536574.365 [IBIT] Loaded
2015-09-29T14:22:54.365Z,1443536574.365 [ComponentRegistry](DEBUG): SyncComponent "IBIT" handled in the control thread.
2015-09-29T14:22:54.368Z,1443536574.368 [CBIT](DEBUG): Construct Continuous Built In Test.
2015-09-29T14:22:54.527Z,1443536574.527 [CBIT] Loaded
2015-09-29T14:22:54.527Z,1443536574.527 [ComponentRegistry](DEBUG): SyncComponent "CBIT" handled in the control thread.
2015-09-29T14:22:54.528Z,1443536574.528 [Module Loader](DEBUG): Loaded Module: BIT (Contains the BuiltInTest components, such as C Built In Test)
2015-09-29T14:22:54.528Z,1443536574.528 [Module Loader](DEBUG): Loading Module at Modules/Derivation.so
2015-09-29T14:22:54.570Z,1443536574.570 [DepthRateCalculator] Loaded
2015-09-29T14:22:54.570Z,1443536574.570 [ComponentRegistry](DEBUG): SyncComponent "DepthRateCalculator" handled in the control thread.
2015-09-29T14:22:54.575Z,1443536574.575 [PitchRateCalculator] Loaded
2015-09-29T14:22:54.576Z,1443536574.576 [ComponentRegistry](DEBUG): SyncComponent "PitchRateCalculator" handled in the control thread.
2015-09-29T14:22:54.591Z,1443536574.591 [SpeedCalculator] Loaded
2015-09-29T14:22:54.591Z,1443536574.591 [ComponentRegistry](DEBUG): SyncComponent "SpeedCalculator" handled in the control thread.
2015-09-29T14:22:54.609Z,1443536574.609 [TempGradientCalculator] Loaded
2015-09-29T14:22:54.609Z,1443536574.609 [ComponentRegistry](DEBUG): SyncComponent "TempGradientCalculator" handled in the control thread.
2015-09-29T14:22:54.626Z,1443536574.626 [VerticalTemperatureHomogeneityIndexCalculator] Loaded
2015-09-29T14:22:54.626Z,1443536574.626 [ComponentRegistry](DEBUG): SyncComponent "VerticalTemperatureHomogeneityIndexCalculator" handled in the control thread.
2015-09-29T14:22:54.636Z,1443536574.636 [YawRateCalculator] Loaded
2015-09-29T14:22:54.636Z,1443536574.636 [ComponentRegistry](DEBUG): SyncComponent "YawRateCalculator" handled in the control thread.
2015-09-29T14:22:54.636Z,1443536574.636 [Module Loader](DEBUG): Loaded Module: Derivation (Contains the base derivation components)
2015-09-29T14:22:54.637Z,1443536574.637 [Module Loader](DEBUG): Loading Module at Modules/Estimation.so
2015-09-29T14:22:54.756Z,1443536574.756 [StratificationFrontDetector](INFO): threshold set to: 0.399988 degC
2015-09-29T14:22:54.756Z,1443536574.756 [StratificationFrontDetector](DEBUG): (re)initializing
2015-09-29T14:22:54.757Z,1443536574.757 [StratificationFrontDetector] Loaded
2015-09-29T14:22:54.757Z,1443536574.757 [ComponentRegistry](DEBUG): SyncComponent "StratificationFrontDetector" handled in the control thread.
2015-09-29T14:22:54.757Z,1443536574.757 [Module Loader](DEBUG): Loaded Module: Estimation (Contains the base estimation components)
2015-09-29T14:22:54.758Z,1443536574.758 [Module Loader](DEBUG): Loading Module at Modules/Guidance.so
2015-09-29T14:22:55.048Z,1443536575.048 [Module Loader](DEBUG): Loaded Module: Guidance (Contains behaviors and commands)
2015-09-29T14:22:55.049Z,1443536575.049 [Module Loader](DEBUG): Loading Module at Modules/Navigation.so
2015-09-29T14:22:55.182Z,1443536575.182 [DeadReckonUsingMultipleVelocitySources] Loaded
2015-09-29T14:22:55.182Z,1443536575.182 [ComponentRegistry](DEBUG): SyncComponent "DeadReckonUsingMultipleVelocitySources" handled in the control thread.
2015-09-29T14:22:55.247Z,1443536575.247 [DeadReckonUsingSpeedCalculator] Loaded
2015-09-29T14:22:55.247Z,1443536575.247 [ComponentRegistry](DEBUG): SyncComponent "DeadReckonUsingSpeedCalculator" handled in the control thread.
2015-09-29T14:22:55.265Z,1443536575.265 [NavChart] Loaded
2015-09-29T14:22:55.265Z,1443536575.265 [ComponentRegistry](DEBUG): SyncComponent "NavChart" handled in the control thread.
2015-09-29T14:22:55.270Z,1443536575.270 [UniversalFixResidualReporter] Loaded
2015-09-29T14:22:55.271Z,1443536575.271 [ComponentRegistry](DEBUG): SyncComponent "UniversalFixResidualReporter" handled in the control thread.
2015-09-29T14:22:55.271Z,1443536575.271 [Module Loader](DEBUG): Loaded Module: Navigation (Contains the base navigation components)
2015-09-29T14:22:55.272Z,1443536575.272 [Module Loader](DEBUG): Loading Module at Modules/Sample.so
2015-09-29T14:22:55.280Z,1443536575.280 [Module Loader](DEBUG): Loaded Module: Sample (This is a Sample Module of Sample Components)
2015-09-29T14:22:55.281Z,1443536575.281 [Module Loader](DEBUG): Loading Module at Modules/Science.so
2015-09-29T14:22:55.580Z,1443536575.580 [CTD_NeilBrown] Loaded
2015-09-29T14:22:55.581Z,1443536575.581 [ComponentRegistry](DEBUG): Component "CTD_NeilBrown" handled in its own thread.
2015-09-29T14:22:55.583Z,1443536575.583 [CTD_NeilBrown ThreadHandler](DEBUG): Created PCaller Thread at 4059D4E0
2015-09-29T14:22:55.583Z,1443536575.583 [CTD_NeilBrown ThreadHandler](INFO): Protected caller Thread ID is 810
2015-09-29T14:22:55.596Z,1443536575.596 [ISUS] Loaded
2015-09-29T14:22:55.596Z,1443536575.596 [ComponentRegistry](DEBUG): SyncComponent "ISUS" handled in the control thread.
2015-09-29T14:22:55.611Z,1443536575.611 [PAR_Licor] Loaded
2015-09-29T14:22:55.611Z,1443536575.611 [ComponentRegistry](DEBUG): SyncComponent "PAR_Licor" handled in the control thread.
2015-09-29T14:22:55.670Z,1443536575.670 [WetLabsBB2FL] Loaded
2015-09-29T14:22:55.671Z,1443536575.671 [ComponentRegistry](DEBUG): Component "WetLabsBB2FL" handled in its own thread.
2015-09-29T14:22:55.674Z,1443536575.674 [WetLabsBB2FL ThreadHandler](DEBUG): Created PCaller Thread at 405CD4E0
2015-09-29T14:22:55.675Z,1443536575.675 [WetLabsBB2FL ThreadHandler](INFO): Protected caller Thread ID is 811
2015-09-29T14:22:55.675Z,1443536575.675 [Module Loader](DEBUG): Loaded Module: Science (Contains the science components)
2015-09-29T14:22:55.676Z,1443536575.676 [Module Loader](DEBUG): Loading Module at Modules/Sensor.so
2015-09-29T14:22:56.402Z,1443536576.402 [AHRS_sp3003D] Loaded
2015-09-29T14:22:56.402Z,1443536576.402 [ComponentRegistry](DEBUG): SyncComponent "AHRS_sp3003D" handled in the control thread.
2015-09-29T14:22:56.593Z,1443536576.593 [DataOverHttps] Loaded
2015-09-29T14:22:56.593Z,1443536576.593 [ComponentRegistry](DEBUG): SyncComponent "DataOverHttps" handled in the control thread.
2015-09-29T14:22:56.611Z,1443536576.611 [Depth_Keller] Loaded
2015-09-29T14:22:56.611Z,1443536576.611 [ComponentRegistry](DEBUG): SyncComponent "Depth_Keller" handled in the control thread.
2015-09-29T14:22:56.616Z,1443536576.616 [DropWeight] Loaded
2015-09-29T14:22:56.616Z,1443536576.616 [ComponentRegistry](DEBUG): SyncComponent "DropWeight" handled in the control thread.
2015-09-29T14:22:56.769Z,1443536576.769 [DVL_micro] Loaded
2015-09-29T14:22:56.769Z,1443536576.769 [ComponentRegistry](DEBUG): SyncComponent "DVL_micro" handled in the control thread.
2015-09-29T14:22:56.877Z,1443536576.877 [NAL9602] Loaded
2015-09-29T14:22:56.877Z,1443536576.877 [ComponentRegistry](DEBUG): SyncComponent "NAL9602" handled in the control thread.
2015-09-29T14:22:56.924Z,1443536576.924 [Onboard] Loaded
2015-09-29T14:22:56.925Z,1443536576.925 [ComponentRegistry](DEBUG): SyncComponent "Onboard" handled in the control thread.
2015-09-29T14:22:56.940Z,1443536576.940 [Radio_Surface] Loaded
2015-09-29T14:22:56.941Z,1443536576.941 [ComponentRegistry](DEBUG): Component "Radio_Surface" handled in its own thread.
2015-09-29T14:22:56.942Z,1443536576.942 [Radio_Surface ThreadHandler](DEBUG): Created PCaller Thread at 408114E0
2015-09-29T14:22:56.943Z,1443536576.943 [Radio_Surface ThreadHandler](INFO): Protected caller Thread ID is 812
2015-09-29T14:22:57.102Z,1443536577.102 [DAT] Loaded
2015-09-29T14:22:57.102Z,1443536577.102 [ComponentRegistry](DEBUG): SyncComponent "DAT" handled in the control thread.
2015-09-29T14:22:57.109Z,1443536577.109 [SCPI] Loaded
2015-09-29T14:22:57.109Z,1443536577.109 [ComponentRegistry](DEBUG): SyncComponent "SCPI" handled in the control thread.
2015-09-29T14:22:57.110Z,1443536577.110 [Module Loader](DEBUG): Loaded Module: Sensor (Contains the sensor components)
2015-09-29T14:22:57.110Z,1443536577.110 [Module Loader](DEBUG): Loading Module at Modules/Servo.so
2015-09-29T14:22:57.241Z,1443536577.241 [BuoyancyServo] Loaded
2015-09-29T14:22:57.241Z,1443536577.241 [ComponentRegistry](DEBUG): SyncComponent "BuoyancyServo" handled in the control thread.
2015-09-29T14:22:57.258Z,1443536577.258 [ElevatorServo] Loaded
2015-09-29T14:22:57.259Z,1443536577.259 [ComponentRegistry](DEBUG): SyncComponent "ElevatorServo" handled in the control thread.
2015-09-29T14:22:57.270Z,1443536577.270 [MassServo] Loaded
2015-09-29T14:22:57.271Z,1443536577.271 [ComponentRegistry](DEBUG): SyncComponent "MassServo" handled in the control thread.
2015-09-29T14:22:57.282Z,1443536577.282 [RudderServo] Loaded
2015-09-29T14:22:57.283Z,1443536577.283 [ComponentRegistry](DEBUG): SyncComponent "RudderServo" handled in the control thread.
2015-09-29T14:22:57.298Z,1443536577.298 [ThrusterServo] Loaded
2015-09-29T14:22:57.298Z,1443536577.298 [ComponentRegistry](DEBUG): SyncComponent "ThrusterServo" handled in the control thread.
2015-09-29T14:22:57.299Z,1443536577.299 [Module Loader](DEBUG): Loaded Module: Servo (This is the module containing motor controllers)
2015-09-29T14:22:57.300Z,1443536577.300 [Module Loader](DEBUG): Loading Module at Modules/Simulator.so
2015-09-29T14:22:57.500Z,1443536577.500 [InternalSim] Loaded
2015-09-29T14:22:57.500Z,1443536577.500 [ComponentRegistry](DEBUG): SyncComponent "InternalSim" handled in the control thread.
2015-09-29T14:22:57.501Z,1443536577.501 [Module Loader](DEBUG): Loaded Module: Simulator (This is the module containing the Simulator)
2015-09-29T14:22:57.501Z,1443536577.501 [Module Loader](DEBUG): Loading Module at Modules/Trigger.so
2015-09-29T14:22:57.544Z,1443536577.544 [Module Loader](DEBUG): Loaded Module: Trigger (Contains triggers for use in missions)
2015-09-29T14:22:57.548Z,1443536577.548 [ComponentRegistry](DEBUG): SyncComponent "MissionManager" handled in the control thread.
2015-09-29T14:22:57.549Z,1443536577.549 [ComponentRegistry](DEBUG): SyncComponent "Reporter" handled in the control thread.
2015-09-29T14:22:57.555Z,1443536577.555 [ComponentRegistry](DEBUG): Component "NavChartDb" handled in its own thread.
2015-09-29T14:22:57.559Z,1443536577.559 [NavChartDb ThreadHandler](DEBUG): Created PCaller Thread at 408BF4E0
2015-09-29T14:22:57.559Z,1443536577.559 [NavChartDb ThreadHandler](INFO): Protected caller Thread ID is 813
2015-09-29T14:22:57.564Z,1443536577.564 [Supervisor](INFO): Main Thread ID is 760
2015-09-29T14:22:57.564Z,1443536577.564 [Supervisor](DEBUG): Running supervisor.
2015-09-29T14:22:57.564Z,1443536577.564 [CommandLine ThreadHandler](INFO): Handler Thread ID is 814
2015-09-29T14:22:57.571Z,1443536577.571 [controlThread ThreadHandler](INFO): Handler Thread ID is 815
2015-09-29T14:22:57.571Z,1443536577.571 [controlThread](DEBUG): Initializing ControlThread
2015-09-29T14:22:57.572Z,1443536577.572 [VerticalControl](DEBUG): Initialize VerticalControlComponent.
2015-09-29T14:22:57.574Z,1443536577.574 [HorizontalControl](DEBUG): Initialize HorizontalControlComponent.
2015-09-29T14:22:57.575Z,1443536577.575 [SpeedControl](DEBUG): Initialize SpeedControlComponent.
2015-09-29T14:22:57.575Z,1443536577.575 [LoopControl](DEBUG): Initialize LoopControlComponent.
2015-09-29T14:22:57.576Z,1443536577.576 [SBIT](INFO): Initialize SBIT Component.
2015-09-29T14:22:57.576Z,1443536577.576 [SBIT](IMPORTANT): Tethys CM Info: SVN revision:12634
2015-09-29T14:22:57.578Z,1443536577.578 [SBIT](INFO): Kernel Reporting Different Release From Configuration.
Kernel Expected: 2.6.32-45-generic-pae
Kernel Reported: 2.6.27.8
2015-09-29T14:22:57.578Z,1443536577.578 [SBIT](INFO): Kernel Reporting Different Version From Configuration.
Kernel Expected: #102-Ubuntu SMP Wed Jan 2 22:10:16 UTC 2013
Kernel Reported: #641 PREEMPT Mon Sep 28 16:45:10 PDT 2015
2015-09-29T14:22:57.579Z,1443536577.579 [SBIT](INFO): Beginning SBIT in 20.000000 seconds.
2015-09-29T14:22:57.580Z,1443536577.580 [IBIT](INFO): Initialize IBIT Component.
2015-09-29T14:22:57.580Z,1443536577.580 [CBIT](DEBUG): Initialize CBIT Component.
2015-09-29T14:22:57.581Z,1443536577.581 [CBIT](FAULT): LAST RESTART WAS UNINTENTIONAL.
2015-09-29T14:22:57.581Z,1443536577.581 [CBIT](INFO): Last reboot was NOT due to watchdog timer.
2015-09-29T14:22:57.581Z,1443536577.581 [DepthRateCalculator](DEBUG): Initializing DepthRateCalculator.
2015-09-29T14:22:57.581Z,1443536577.581 [PitchRateCalculator](DEBUG): Initializing PitchRateCalculator.
2015-09-29T14:22:57.582Z,1443536577.582 [SpeedCalculator](DEBUG): Initializing SpeedCalculator.
2015-09-29T14:22:57.582Z,1443536577.582 [TempGradientCalculator](DEBUG): Initializing TempGradientCalculator.
2015-09-29T14:22:57.583Z,1443536577.583 [VerticalTemperatureHomogeneityIndexCalculator](DEBUG): (re)initializing
2015-09-29T14:22:57.583Z,1443536577.583 [YawRateCalculator](DEBUG): Initializing YawRateCalculator.
2015-09-29T14:22:57.584Z,1443536577.584 [DeadReckonUsingMultipleVelocitySources](DEBUG): Initializing DeadReckonUsingMultipleVelocitySources component.
2015-09-29T14:22:57.584Z,1443536577.584 [DeadReckonUsingMultipleVelocitySources](INFO): Will consider orientation measurement stale after 120s.
2015-09-29T14:22:57.585Z,1443536577.585 [DeadReckonUsingMultipleVelocitySources](INFO): Will consider velocity measurement stale after 20s.
2015-09-29T14:22:57.585Z,1443536577.585 [DeadReckonUsingSpeedCalculator](DEBUG): Initializing DeadReckonUsingSpeedCalculator component.
2015-09-29T14:22:57.586Z,1443536577.586 [DeadReckonUsingSpeedCalculator](INFO): Will consider orientation measurement stale after 120s.
2015-09-29T14:22:57.586Z,1443536577.586 [DeadReckonUsingSpeedCalculator](INFO): Will consider velocity measurement stale after 20s.
2015-09-29T14:22:57.587Z,1443536577.587 [NavChart](DEBUG): Initialize NavChart Navigation.
2015-09-29T14:22:57.587Z,1443536577.587 [UniversalFixResidualReporter](DEBUG): Initializing UniversalFixResidualReporter component.
2015-09-29T14:22:57.592Z,1443536577.592 [InternalSim](DEBUG):  InternalSim initializing...
2015-09-29T14:22:57.623Z,1443536577.623 [logger ThreadHandler](INFO): Handler Thread ID is 816
2015-09-29T14:22:57.723Z,1443536577.723 [CTD_NeilBrown ThreadHandler](INFO): Handler Thread ID is 817
2015-09-29T14:22:57.724Z,1443536577.724 [WetLabsBB2FL ThreadHandler](INFO): Handler Thread ID is 818
2015-09-29T14:22:57.735Z,1443536577.735 [Radio_Surface ThreadHandler](INFO): Handler Thread ID is 819
2015-09-29T14:22:57.802Z,1443536577.802 [NavChartDb ThreadHandler](INFO): Handler Thread ID is 820
2015-09-29T14:22:57.812Z,1443536577.812 [NavChartDb](INFO): Looking for Electronic Nav Chart files in directory: Resources
2015-09-29T14:22:57.814Z,1443536577.814 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US1WC07M.000
2015-09-29T14:22:57.814Z,1443536577.814 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US2WC11M.000
2015-09-29T14:22:57.815Z,1443536577.815 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US3CA52M.000
2015-09-29T14:22:57.815Z,1443536577.815 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US4CA60M.000
2015-09-29T14:22:57.815Z,1443536577.815 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA50M.000
2015-09-29T14:22:57.815Z,1443536577.815 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA61M.000
2015-09-29T14:22:57.816Z,1443536577.816 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA62M.000
2015-09-29T14:22:57.816Z,1443536577.816 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA83M.000
2015-09-29T14:22:57.859Z,1443536577.859 [MissionManager](INFO): Loading Mission: Missions/Startup.xml
2015-09-29T14:22:57.892Z,1443536577.892 [Startup:A.GoToSurface](DEBUG): Construct GoToSurface.
2015-09-29T14:22:57.902Z,1443536577.902 [MissionManager](DEBUG): 
<?xml version="1.0" encoding="UTF-8"?>
<Mission xmlns="Tethys"
       xmlns:Control="Tethys/Control"
       xmlns:Guidance="Tethys/Guidance" 
       xmlns:Units="Tethys/Units"
       xmlns:Universal="Tethys/Universal"
       xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
       xsi:schemaLocation="Tethys http://okeanids.mbari.org/tethys/Xml/Tethys.xsd
                           Tethys/Control http://okeanids.mbari.org/tethys/Xml/Control.xsd
                           Tethys/Guidance http://okeanids.mbari.org/tethys/Xml/Guidance.xsd
                           Tethys/Units http://okeanids.mbari.org/tethys/Xml/Units.xsd
                           Tethys/Universal http://okeanids.mbari.org/tethys/Xml/Universal.xsd"
       Id="Startup">

    <Guidance:GoToSurface>
        <Progression/>
    </Guidance:GoToSurface>

    <Aggregate Id="StartupSatComms">

        <Sequence/>

        <ReadDatum>
            <Timeout Duration="P1M" />
            <Universal:latitude_fix/>
        </ReadDatum>

        <ReadDatum>
            <Timeout Duration="P1M" />
            <Universal:platform_communications/>
        </ReadDatum>

    </Aggregate>

</Mission>


2015-09-29T14:22:57.919Z,1443536577.919 [MissionManager](INFO): Loading Mission: Missions/Default.xml
2015-09-29T14:22:58.006Z,1443536578.006 [MissionManager](INFO): DefineArg Default.ElapsedSinceDefaultStarted = 0.000000 min
2015-09-29T14:22:58.007Z,1443536578.007 [Default:A.GoToSurface](DEBUG): Construct GoToSurface.
2015-09-29T14:22:58.026Z,1443536578.026 [Default:CheckIn:Read_Iridium:A_Timeout:A.Execute](DEBUG): Construct Execute.
2015-09-29T14:22:58.056Z,1443536578.056 [Default:CheckIn:C.Wait](DEBUG): Construct Wait.
2015-09-29T14:22:58.086Z,1443536578.086 [Default:D.Execute](DEBUG): Construct Execute.
2015-09-29T14:22:58.090Z,1443536578.090 [MissionManager](DEBUG): 
<?xml version="1.0" encoding="UTF-8"?>
<Mission xmlns="Tethys"
xmlns:Guidance="Tethys/Guidance"
xmlns:Units="Tethys/Units"
xmlns:Universal="Tethys/Universal"
xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
xsi:schemaLocation="Tethys http://okeanids.mbari.org/tethys/Xml/Tethys.xsd
Tethys/Guidance http://okeanids.mbari.org/tethys/Xml/Guidance.xsd
Tethys/Units http://okeanids.mbari.org/tethys/Xml/Units.xsd
Tethys/Universal http://okeanids.mbari.org/tethys/Xml/Universal.xsd"
Id="Default">

    <DefineArg Name="ElapsedSinceDefaultStarted"><Units:minute/><Value>0</Value></DefineArg>

    <Guidance:GoToSurface>
        <Progression/>
    </Guidance:GoToSurface>

    <Aggregate Id="CheckIn">

        <Sequence Repeat="288"/>

        <ReadDatum Id="Read_GPS">
            <Sequence/>
            <Timeout Duration="P5M"/>
            <Universal:time_fix/>
        </ReadDatum>

        <ReadDatum Id="Read_Iridium">
            <Sequence/>
            <Timeout Duration="P2H">
                <Guidance:Execute>
                    <Sequence/>
                    <Setting><Guidance:Execute.command/><String>Burn 300</String></Setting>
                </Guidance:Execute>
                <Syslog Severity="Critical">Dropped weight due to communications timeout.</Syslog>
            </Timeout>
            <Universal:platform_communications/>
        </ReadDatum>

        <Guidance:Wait>
            <Sequence/>
            <Setting><Guidance:Wait.duration/><Units:minute/><Value>5</Value></Setting>
        </Guidance:Wait>

        <Assign><Sequence/><Arg Name="ElapsedSinceDefaultStarted"/><Elapsed><Universal:mission_started/></Elapsed></Assign>

        <Syslog Severity="Important">Default mission has been running for <Arg Name="ElapsedSinceDefaultStarted"/><Units:minute/></Syslog>

    </Aggregate>

    <Syslog Severity="Important">Restarting logs and Default mission.</Syslog>

    <Guidance:Execute>
        <Sequence/>
        <Setting><Guidance:Execute.command/><String>restart logs</String></Setting>
    </Guidance:Execute>

</Mission>


2015-09-29T14:22:58.096Z,1443536578.096 [controlThread](DEBUG): Component order: CycleStarter,InternalSim,ISUS,PAR_Licor,AHRS_sp3003D,DataOverHttps,Depth_Keller,DropWeight,DVL_micro,NAL9602,Onboard,DAT,SCPI,PAR_Licor,Depth_Keller,DepthRateCalculator,PitchRateCalculator,SpeedCalculator,TempGradientCalculator,VerticalTemperatureHomogeneityIndexCalculator,YawRateCalculator,StratificationFrontDetector,DeadReckonUsingMultipleVelocitySources,DeadReckonUsingSpeedCalculator,NavChart,UniversalFixResidualReporter,MissionManager,VerticalControl,HorizontalControl,SpeedControl,LoopControl,BuoyancyServo,ElevatorServo,MassServo,RudderServo,ThrusterServo,SBIT,IBIT,CBIT,Reporter,LogSplitter,
2015-09-29T14:22:58.293Z,1443536578.293 [DVL_micro](INFO): Initializing
2015-09-29T14:22:58.475Z,1443536578.475 [DeadReckonUsingMultipleVelocitySources](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T14:22:58.483Z,1443536578.483 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T14:22:58.615Z,1443536578.615 [BuoyancyServo](DEBUG): Initializing BuoyancyServo.
2015-09-29T14:22:58.621Z,1443536578.621 [ElevatorServo](DEBUG): Initializing ElevatorServo.
2015-09-29T14:22:58.643Z,1443536578.643 [MassServo](DEBUG): Initializing MassServo.
2015-09-29T14:22:58.667Z,1443536578.667 [RudderServo](DEBUG): Initializing RudderServo.
2015-09-29T14:22:58.672Z,1443536578.672 [ThrusterServo](DEBUG): Initializing ThrusterServo.
2015-09-29T14:22:58.957Z,1443536578.957 [DeadReckonUsingMultipleVelocitySources](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T14:22:58.958Z,1443536578.958 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T14:23:08.057Z,1443536588.057 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T14:23:08.402Z,1443536588.402 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T14:23:08.517Z,1443536588.517 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T14:23:08.909Z,1443536588.909 [DataOverHttps](INFO): setting available, lastComms_.elapsed()=0.003000
2015-09-29T14:23:08.913Z,1443536588.913 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T14:23:09.308Z,1443536589.308 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T14:23:09.708Z,1443536589.708 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T14:23:10.108Z,1443536590.108 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T14:23:10.508Z,1443536590.508 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T14:23:10.911Z,1443536590.911 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T14:23:11.307Z,1443536591.307 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T14:23:11.707Z,1443536591.707 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T14:23:12.108Z,1443536592.108 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T14:23:12.511Z,1443536592.511 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T14:23:12.907Z,1443536592.907 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T14:23:13.307Z,1443536593.307 [NAL9602](INFO): No messages in MT queue
2015-09-29T14:23:13.308Z,1443536593.308 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T14:23:13.708Z,1443536593.708 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T14:23:14.108Z,1443536594.108 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T14:23:14.513Z,1443536594.513 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T14:23:14.910Z,1443536594.910 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T14:23:15.313Z,1443536595.313 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T14:23:15.718Z,1443536595.718 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T14:23:16.110Z,1443536596.110 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T14:23:16.512Z,1443536596.512 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T14:23:16.910Z,1443536596.910 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T14:23:17.312Z,1443536597.312 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T14:23:17.712Z,1443536597.712 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T14:23:18.113Z,1443536598.113 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T14:23:18.127Z,1443536598.127 [SBIT](IMPORTANT): Beginning Startup BIT
2015-09-29T14:23:18.512Z,1443536598.512 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T14:23:18.912Z,1443536598.912 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T14:23:19.312Z,1443536599.312 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T14:23:19.713Z,1443536599.713 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T14:23:20.109Z,1443536600.109 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T14:23:20.513Z,1443536600.513 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T14:23:20.922Z,1443536600.922 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T14:23:21.308Z,1443536601.308 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T14:23:21.708Z,1443536601.708 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T14:23:22.107Z,1443536602.107 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T14:23:22.508Z,1443536602.508 [D