2015-09-29T14:14:54.837Z,1443536094.837 [Supervisor](DEBUG): Initializing supervisor.
2015-09-29T14:14:54.839Z,1443536094.839 [SyncHandler](DEBUG): Created PCaller Thread at 4034C4E0
2015-09-29T14:14:54.840Z,1443536094.840 [SyncHandler](INFO): Protected caller Thread ID is 761
2015-09-29T14:14:54.840Z,1443536094.840 [ComponentRegistry](DEBUG): Component "controlThread" handled in its own thread.
2015-09-29T14:14:54.843Z,1443536094.843 [controlThread ThreadHandler](DEBUG): Created PCaller Thread at 4037C4E0
2015-09-29T14:14:54.844Z,1443536094.844 [controlThread ThreadHandler](INFO): Protected caller Thread ID is 762
2015-09-29T14:14:54.846Z,1443536094.846 [ComponentRegistry](DEBUG): SyncComponent "CycleStarter" handled in the control thread.
2015-09-29T14:14:54.859Z,1443536094.859 [ComponentRegistry](DEBUG): Component "CommandLine" handled in its own thread.
2015-09-29T14:14:54.863Z,1443536094.863 [CommandLine ThreadHandler](DEBUG): Created PCaller Thread at 403AC4E0
2015-09-29T14:14:54.864Z,1443536094.864 [CommandLine ThreadHandler](INFO): Protected caller Thread ID is 763
2015-09-29T14:14:54.865Z,1443536094.865 [ComponentRegistry](DEBUG): Component "logger" handled in its own thread.
2015-09-29T14:14:54.867Z,1443536094.867 [logger ThreadHandler](DEBUG): Created PCaller Thread at 403DC4E0
2015-09-29T14:14:54.868Z,1443536094.868 [logger ThreadHandler](INFO): Protected caller Thread ID is 764
2015-09-29T14:14:54.870Z,1443536094.870 [ComponentRegistry](DEBUG): SyncComponent "LogSplitter" handled in the control thread.
2015-09-29T14:14:54.870Z,1443536094.870 [Supervisor](INFO): Looking for Config files in directory: Config/
2015-09-29T14:14:54.874Z,1443536094.874 [Supervisor](INFO): Opening Config file at: Config/Control.cfg
2015-09-29T14:14:55.255Z,1443536095.255 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Control
2015-09-29T14:14:55.257Z,1443536095.257 [Supervisor](INFO): Opening Config file at: Config/BIT.cfg
2015-09-29T14:14:55.448Z,1443536095.448 [ComponentRegistry](DEBUG): Loaded Config Component "Config/BIT
2015-09-29T14:14:55.450Z,1443536095.450 [Supervisor](INFO): Opening Config file at: Config/Derivation.cfg
2015-09-29T14:14:55.596Z,1443536095.596 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Derivation
2015-09-29T14:14:55.597Z,1443536095.597 [Supervisor](INFO): Opening Config file at: Config/Estimation.cfg
2015-09-29T14:14:55.748Z,1443536095.748 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Estimation
2015-09-29T14:14:55.749Z,1443536095.749 [Supervisor](INFO): Opening Config file at: Config/Guidance.cfg
2015-09-29T14:14:55.843Z,1443536095.843 [Supervisor](INFO): Opening Config file at: Config/Navigation.cfg
2015-09-29T14:14:56.064Z,1443536096.064 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Navigation
2015-09-29T14:14:56.065Z,1443536096.065 [Supervisor](INFO): Opening Config file at: Config/Sample.cfg
2015-09-29T14:14:56.160Z,1443536096.160 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Sample
2015-09-29T14:14:56.161Z,1443536096.161 [Supervisor](INFO): Opening Config file at: Config/Science.cfg
2015-09-29T14:14:56.476Z,1443536096.476 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Science
2015-09-29T14:14:56.477Z,1443536096.477 [Supervisor](INFO): Opening Config file at: Config/Sensor.cfg
2015-09-29T14:14:56.877Z,1443536096.877 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Sensor
2015-09-29T14:14:56.877Z,1443536096.877 [Supervisor](INFO): Opening Config file at: Config/Servo.cfg
2015-09-29T14:14:57.228Z,1443536097.228 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Servo
2015-09-29T14:14:57.230Z,1443536097.230 [Supervisor](INFO): Opening Config file at: Config/Simulator.cfg
2015-09-29T14:14:57.829Z,1443536097.829 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Simulator
2015-09-29T14:14:57.830Z,1443536097.830 [Supervisor](INFO): Opening Config file at: Config/logger.cfg
2015-09-29T14:14:58.061Z,1443536098.061 [ComponentRegistry](DEBUG): Loaded Config Component "Config/logger
2015-09-29T14:14:58.061Z,1443536098.061 [Supervisor](INFO): Opening Config file at: Config/secure.cfg
2015-09-29T14:14:58.170Z,1443536098.170 [ComponentRegistry](DEBUG): Loaded Config Component "Config/secure
2015-09-29T14:14:58.171Z,1443536098.171 [Supervisor](INFO): Opening Config file at: Config/vehicle.cfg
2015-09-29T14:14:58.697Z,1443536098.697 [ComponentRegistry](DEBUG): Loaded Config Component "Config/vehicle
2015-09-29T14:14:58.697Z,1443536098.697 [Supervisor](INFO): Opening Config file at: Config/workSite.cfg
2015-09-29T14:14:58.823Z,1443536098.823 [ComponentRegistry](DEBUG): Loaded Config Component "Config/workSite
2015-09-29T14:14:58.825Z,1443536098.825 [Supervisor](INFO): Looking for Config files in directory: Config/(none)/
2015-09-29T14:14:58.825Z,1443536098.825 [Supervisor](FAULT): Ignoring configuration overrides from Data/persisted.cfg
2015-09-29T14:14:58.830Z,1443536098.830 [Module Loader](DEBUG): Loading Module at Modules/Control.so
2015-09-29T14:14:58.905Z,1443536098.905 [VerticalControl](DEBUG): Construct VerticalControl.
2015-09-29T14:14:59.042Z,1443536099.042 [VerticalControl] Loaded
2015-09-29T14:14:59.042Z,1443536099.042 [ComponentRegistry](DEBUG): SyncComponent "VerticalControl" handled in the control thread.
2015-09-29T14:14:59.043Z,1443536099.043 [HorizontalControl](DEBUG): Construct HorizontalControl.
2015-09-29T14:14:59.125Z,1443536099.125 [HorizontalControl] Loaded
2015-09-29T14:14:59.125Z,1443536099.125 [ComponentRegistry](DEBUG): SyncComponent "HorizontalControl" handled in the control thread.
2015-09-29T14:14:59.126Z,1443536099.126 [SpeedControl](DEBUG): Construct SpeedControl.
2015-09-29T14:14:59.136Z,1443536099.136 [SpeedControl] Loaded
2015-09-29T14:14:59.136Z,1443536099.136 [ComponentRegistry](DEBUG): SyncComponent "SpeedControl" handled in the control thread.
2015-09-29T14:14:59.137Z,1443536099.137 [LoopControl](DEBUG): Construct LoopControl.
2015-09-29T14:14:59.138Z,1443536099.138 [LoopControl] Loaded
2015-09-29T14:14:59.138Z,1443536099.138 [ComponentRegistry](DEBUG): SyncComponent "LoopControl" handled in the control thread.
2015-09-29T14:14:59.138Z,1443536099.138 [Module Loader](DEBUG): Loaded Module: Control (Contains the Control components, such as Depth, Heading, and Speed Control)
2015-09-29T14:14:59.139Z,1443536099.139 [Module Loader](DEBUG): Loading Module at Modules/BIT.so
2015-09-29T14:14:59.303Z,1443536099.303 [SBIT](DEBUG): Construct Startup Built In Test.
2015-09-29T14:14:59.315Z,1443536099.315 [SBIT] Loaded
2015-09-29T14:14:59.319Z,1443536099.319 [ComponentRegistry](DEBUG): SyncComponent "SBIT" handled in the control thread.
2015-09-29T14:14:59.320Z,1443536099.320 [IBIT](DEBUG): Construct Initiated Built In Test.
2015-09-29T14:14:59.350Z,1443536099.350 [IBIT] Loaded
2015-09-29T14:14:59.351Z,1443536099.351 [ComponentRegistry](DEBUG): SyncComponent "IBIT" handled in the control thread.
2015-09-29T14:14:59.353Z,1443536099.353 [CBIT](DEBUG): Construct Continuous Built In Test.
2015-09-29T14:14:59.510Z,1443536099.510 [CBIT] Loaded
2015-09-29T14:14:59.510Z,1443536099.510 [ComponentRegistry](DEBUG): SyncComponent "CBIT" handled in the control thread.
2015-09-29T14:14:59.511Z,1443536099.511 [Module Loader](DEBUG): Loaded Module: BIT (Contains the BuiltInTest components, such as C Built In Test)
2015-09-29T14:14:59.512Z,1443536099.512 [Module Loader](DEBUG): Loading Module at Modules/Derivation.so
2015-09-29T14:14:59.553Z,1443536099.553 [DepthRateCalculator] Loaded
2015-09-29T14:14:59.553Z,1443536099.553 [ComponentRegistry](DEBUG): SyncComponent "DepthRateCalculator" handled in the control thread.
2015-09-29T14:14:59.559Z,1443536099.559 [PitchRateCalculator] Loaded
2015-09-29T14:14:59.559Z,1443536099.559 [ComponentRegistry](DEBUG): SyncComponent "PitchRateCalculator" handled in the control thread.
2015-09-29T14:14:59.571Z,1443536099.571 [SpeedCalculator] Loaded
2015-09-29T14:14:59.571Z,1443536099.571 [ComponentRegistry](DEBUG): SyncComponent "SpeedCalculator" handled in the control thread.
2015-09-29T14:14:59.593Z,1443536099.593 [TempGradientCalculator] Loaded
2015-09-29T14:14:59.593Z,1443536099.593 [ComponentRegistry](DEBUG): SyncComponent "TempGradientCalculator" handled in the control thread.
2015-09-29T14:14:59.610Z,1443536099.610 [VerticalTemperatureHomogeneityIndexCalculator] Loaded
2015-09-29T14:14:59.611Z,1443536099.611 [ComponentRegistry](DEBUG): SyncComponent "VerticalTemperatureHomogeneityIndexCalculator" handled in the control thread.
2015-09-29T14:14:59.616Z,1443536099.616 [YawRateCalculator] Loaded
2015-09-29T14:14:59.617Z,1443536099.617 [ComponentRegistry](DEBUG): SyncComponent "YawRateCalculator" handled in the control thread.
2015-09-29T14:14:59.617Z,1443536099.617 [Module Loader](DEBUG): Loaded Module: Derivation (Contains the base derivation components)
2015-09-29T14:14:59.618Z,1443536099.618 [Module Loader](DEBUG): Loading Module at Modules/Estimation.so
2015-09-29T14:14:59.739Z,1443536099.739 [StratificationFrontDetector](INFO): threshold set to: 0.399988 degC
2015-09-29T14:14:59.739Z,1443536099.739 [StratificationFrontDetector](DEBUG): (re)initializing
2015-09-29T14:14:59.739Z,1443536099.739 [StratificationFrontDetector] Loaded
2015-09-29T14:14:59.740Z,1443536099.740 [ComponentRegistry](DEBUG): SyncComponent "StratificationFrontDetector" handled in the control thread.
2015-09-29T14:14:59.740Z,1443536099.740 [Module Loader](DEBUG): Loaded Module: Estimation (Contains the base estimation components)
2015-09-29T14:14:59.741Z,1443536099.741 [Module Loader](DEBUG): Loading Module at Modules/Guidance.so
2015-09-29T14:15:00.039Z,1443536100.039 [Module Loader](DEBUG): Loaded Module: Guidance (Contains behaviors and commands)
2015-09-29T14:15:00.040Z,1443536100.040 [Module Loader](DEBUG): Loading Module at Modules/Navigation.so
2015-09-29T14:15:00.176Z,1443536100.176 [DeadReckonUsingMultipleVelocitySources] Loaded
2015-09-29T14:15:00.177Z,1443536100.177 [ComponentRegistry](DEBUG): SyncComponent "DeadReckonUsingMultipleVelocitySources" handled in the control thread.
2015-09-29T14:15:00.238Z,1443536100.238 [DeadReckonUsingSpeedCalculator] Loaded
2015-09-29T14:15:00.238Z,1443536100.238 [ComponentRegistry](DEBUG): SyncComponent "DeadReckonUsingSpeedCalculator" handled in the control thread.
2015-09-29T14:15:00.260Z,1443536100.260 [NavChart] Loaded
2015-09-29T14:15:00.261Z,1443536100.261 [ComponentRegistry](DEBUG): SyncComponent "NavChart" handled in the control thread.
2015-09-29T14:15:00.266Z,1443536100.266 [UniversalFixResidualReporter] Loaded
2015-09-29T14:15:00.266Z,1443536100.266 [ComponentRegistry](DEBUG): SyncComponent "UniversalFixResidualReporter" handled in the control thread.
2015-09-29T14:15:00.267Z,1443536100.267 [Module Loader](DEBUG): Loaded Module: Navigation (Contains the base navigation components)
2015-09-29T14:15:00.267Z,1443536100.267 [Module Loader](DEBUG): Loading Module at Modules/Sample.so
2015-09-29T14:15:00.276Z,1443536100.276 [Module Loader](DEBUG): Loaded Module: Sample (This is a Sample Module of Sample Components)
2015-09-29T14:15:00.277Z,1443536100.277 [Module Loader](DEBUG): Loading Module at Modules/Science.so
2015-09-29T14:15:00.587Z,1443536100.587 [CTD_NeilBrown] Loaded
2015-09-29T14:15:00.587Z,1443536100.587 [ComponentRegistry](DEBUG): Component "CTD_NeilBrown" handled in its own thread.
2015-09-29T14:15:00.591Z,1443536100.591 [CTD_NeilBrown ThreadHandler](DEBUG): Created PCaller Thread at 4059D4E0
2015-09-29T14:15:00.592Z,1443536100.592 [CTD_NeilBrown ThreadHandler](INFO): Protected caller Thread ID is 810
2015-09-29T14:15:00.605Z,1443536100.605 [ISUS] Loaded
2015-09-29T14:15:00.605Z,1443536100.605 [ComponentRegistry](DEBUG): SyncComponent "ISUS" handled in the control thread.
2015-09-29T14:15:00.624Z,1443536100.624 [PAR_Licor] Loaded
2015-09-29T14:15:00.624Z,1443536100.624 [ComponentRegistry](DEBUG): SyncComponent "PAR_Licor" handled in the control thread.
2015-09-29T14:15:00.681Z,1443536100.681 [WetLabsBB2FL] Loaded
2015-09-29T14:15:00.681Z,1443536100.681 [ComponentRegistry](DEBUG): Component "WetLabsBB2FL" handled in its own thread.
2015-09-29T14:15:00.683Z,1443536100.683 [WetLabsBB2FL ThreadHandler](DEBUG): Created PCaller Thread at 405CD4E0
2015-09-29T14:15:00.684Z,1443536100.684 [WetLabsBB2FL ThreadHandler](INFO): Protected caller Thread ID is 811
2015-09-29T14:15:00.684Z,1443536100.684 [Module Loader](DEBUG): Loaded Module: Science (Contains the science components)
2015-09-29T14:15:00.685Z,1443536100.685 [Module Loader](DEBUG): Loading Module at Modules/Sensor.so
2015-09-29T14:15:01.421Z,1443536101.421 [AHRS_sp3003D] Loaded
2015-09-29T14:15:01.421Z,1443536101.421 [ComponentRegistry](DEBUG): SyncComponent "AHRS_sp3003D" handled in the control thread.
2015-09-29T14:15:01.616Z,1443536101.616 [DataOverHttps] Loaded
2015-09-29T14:15:01.616Z,1443536101.616 [ComponentRegistry](DEBUG): SyncComponent "DataOverHttps" handled in the control thread.
2015-09-29T14:15:01.630Z,1443536101.630 [Depth_Keller] Loaded
2015-09-29T14:15:01.630Z,1443536101.630 [ComponentRegistry](DEBUG): SyncComponent "Depth_Keller" handled in the control thread.
2015-09-29T14:15:01.635Z,1443536101.635 [DropWeight] Loaded
2015-09-29T14:15:01.635Z,1443536101.635 [ComponentRegistry](DEBUG): SyncComponent "DropWeight" handled in the control thread.
2015-09-29T14:15:01.795Z,1443536101.795 [DVL_micro] Loaded
2015-09-29T14:15:01.795Z,1443536101.795 [ComponentRegistry](DEBUG): SyncComponent "DVL_micro" handled in the control thread.
2015-09-29T14:15:01.905Z,1443536101.905 [NAL9602] Loaded
2015-09-29T14:15:01.906Z,1443536101.906 [ComponentRegistry](DEBUG): SyncComponent "NAL9602" handled in the control thread.
2015-09-29T14:15:01.953Z,1443536101.953 [Onboard] Loaded
2015-09-29T14:15:01.954Z,1443536101.954 [ComponentRegistry](DEBUG): SyncComponent "Onboard" handled in the control thread.
2015-09-29T14:15:01.966Z,1443536101.966 [Radio_Surface] Loaded
2015-09-29T14:15:01.966Z,1443536101.966 [ComponentRegistry](DEBUG): Component "Radio_Surface" handled in its own thread.
2015-09-29T14:15:01.967Z,1443536101.967 [Radio_Surface ThreadHandler](DEBUG): Created PCaller Thread at 408114E0
2015-09-29T14:15:01.968Z,1443536101.968 [Radio_Surface ThreadHandler](INFO): Protected caller Thread ID is 812
2015-09-29T14:15:02.130Z,1443536102.130 [DAT] Loaded
2015-09-29T14:15:02.131Z,1443536102.131 [ComponentRegistry](DEBUG): SyncComponent "DAT" handled in the control thread.
2015-09-29T14:15:02.137Z,1443536102.137 [SCPI] Loaded
2015-09-29T14:15:02.138Z,1443536102.138 [ComponentRegistry](DEBUG): SyncComponent "SCPI" handled in the control thread.
2015-09-29T14:15:02.138Z,1443536102.138 [Module Loader](DEBUG): Loaded Module: Sensor (Contains the sensor components)
2015-09-29T14:15:02.139Z,1443536102.139 [Module Loader](DEBUG): Loading Module at Modules/Servo.so
2015-09-29T14:15:02.277Z,1443536102.277 [BuoyancyServo] Loaded
2015-09-29T14:15:02.277Z,1443536102.277 [ComponentRegistry](DEBUG): SyncComponent "BuoyancyServo" handled in the control thread.
2015-09-29T14:15:02.290Z,1443536102.290 [ElevatorServo] Loaded
2015-09-29T14:15:02.290Z,1443536102.290 [ComponentRegistry](DEBUG): SyncComponent "ElevatorServo" handled in the control thread.
2015-09-29T14:15:02.302Z,1443536102.302 [MassServo] Loaded
2015-09-29T14:15:02.303Z,1443536102.303 [ComponentRegistry](DEBUG): SyncComponent "MassServo" handled in the control thread.
2015-09-29T14:15:02.319Z,1443536102.319 [RudderServo] Loaded
2015-09-29T14:15:02.319Z,1443536102.319 [ComponentRegistry](DEBUG): SyncComponent "RudderServo" handled in the control thread.
2015-09-29T14:15:02.331Z,1443536102.331 [ThrusterServo] Loaded
2015-09-29T14:15:02.331Z,1443536102.331 [ComponentRegistry](DEBUG): SyncComponent "ThrusterServo" handled in the control thread.
2015-09-29T14:15:02.331Z,1443536102.331 [Module Loader](DEBUG): Loaded Module: Servo (This is the module containing motor controllers)
2015-09-29T14:15:02.332Z,1443536102.332 [Module Loader](DEBUG): Loading Module at Modules/Simulator.so
2015-09-29T14:15:02.540Z,1443536102.540 [InternalSim] Loaded
2015-09-29T14:15:02.540Z,1443536102.540 [ComponentRegistry](DEBUG): SyncComponent "InternalSim" handled in the control thread.
2015-09-29T14:15:02.541Z,1443536102.541 [Module Loader](DEBUG): Loaded Module: Simulator (This is the module containing the Simulator)
2015-09-29T14:15:02.541Z,1443536102.541 [Module Loader](DEBUG): Loading Module at Modules/Trigger.so
2015-09-29T14:15:02.585Z,1443536102.585 [Module Loader](DEBUG): Loaded Module: Trigger (Contains triggers for use in missions)
2015-09-29T14:15:02.589Z,1443536102.589 [ComponentRegistry](DEBUG): SyncComponent "MissionManager" handled in the control thread.
2015-09-29T14:15:02.590Z,1443536102.590 [ComponentRegistry](DEBUG): SyncComponent "Reporter" handled in the control thread.
2015-09-29T14:15:02.601Z,1443536102.601 [ComponentRegistry](DEBUG): Component "NavChartDb" handled in its own thread.
2015-09-29T14:15:02.603Z,1443536102.603 [NavChartDb ThreadHandler](DEBUG): Created PCaller Thread at 408BF4E0
2015-09-29T14:15:02.604Z,1443536102.604 [NavChartDb ThreadHandler](INFO): Protected caller Thread ID is 813
2015-09-29T14:15:02.609Z,1443536102.609 [Supervisor](INFO): Main Thread ID is 760
2015-09-29T14:15:02.609Z,1443536102.609 [Supervisor](DEBUG): Running supervisor.
2015-09-29T14:15:02.609Z,1443536102.609 [CommandLine ThreadHandler](INFO): Handler Thread ID is 814
2015-09-29T14:15:02.616Z,1443536102.616 [controlThread ThreadHandler](INFO): Handler Thread ID is 815
2015-09-29T14:15:02.616Z,1443536102.616 [controlThread](DEBUG): Initializing ControlThread
2015-09-29T14:15:02.617Z,1443536102.617 [VerticalControl](DEBUG): Initialize VerticalControlComponent.
2015-09-29T14:15:02.619Z,1443536102.619 [HorizontalControl](DEBUG): Initialize HorizontalControlComponent.
2015-09-29T14:15:02.620Z,1443536102.620 [SpeedControl](DEBUG): Initialize SpeedControlComponent.
2015-09-29T14:15:02.620Z,1443536102.620 [LoopControl](DEBUG): Initialize LoopControlComponent.
2015-09-29T14:15:02.621Z,1443536102.621 [SBIT](INFO): Initialize SBIT Component.
2015-09-29T14:15:02.621Z,1443536102.621 [SBIT](IMPORTANT): Tethys CM Info: SVN revision:12634
2015-09-29T14:15:02.623Z,1443536102.623 [SBIT](INFO): Kernel Reporting Different Release From Configuration.
Kernel Expected: 2.6.32-45-generic-pae
Kernel Reported: 2.6.27.8
2015-09-29T14:15:02.623Z,1443536102.623 [SBIT](INFO): Kernel Reporting Different Version From Configuration.
Kernel Expected: #102-Ubuntu SMP Wed Jan 2 22:10:16 UTC 2013
Kernel Reported: #641 PREEMPT Mon Sep 28 16:45:10 PDT 2015
2015-09-29T14:15:02.624Z,1443536102.624 [SBIT](INFO): Beginning SBIT in 20.000000 seconds.
2015-09-29T14:15:02.624Z,1443536102.624 [IBIT](INFO): Initialize IBIT Component.
2015-09-29T14:15:02.625Z,1443536102.625 [CBIT](DEBUG): Initialize CBIT Component.
2015-09-29T14:15:02.625Z,1443536102.625 [CBIT](FAULT): LAST RESTART WAS UNINTENTIONAL.
2015-09-29T14:15:02.626Z,1443536102.626 [CBIT](INFO): Last reboot was NOT due to watchdog timer.
2015-09-29T14:15:02.626Z,1443536102.626 [DepthRateCalculator](DEBUG): Initializing DepthRateCalculator.
2015-09-29T14:15:02.626Z,1443536102.626 [PitchRateCalculator](DEBUG): Initializing PitchRateCalculator.
2015-09-29T14:15:02.627Z,1443536102.627 [SpeedCalculator](DEBUG): Initializing SpeedCalculator.
2015-09-29T14:15:02.627Z,1443536102.627 [TempGradientCalculator](DEBUG): Initializing TempGradientCalculator.
2015-09-29T14:15:02.627Z,1443536102.627 [VerticalTemperatureHomogeneityIndexCalculator](DEBUG): (re)initializing
2015-09-29T14:15:02.628Z,1443536102.628 [YawRateCalculator](DEBUG): Initializing YawRateCalculator.
2015-09-29T14:15:02.629Z,1443536102.629 [DeadReckonUsingMultipleVelocitySources](DEBUG): Initializing DeadReckonUsingMultipleVelocitySources component.
2015-09-29T14:15:02.629Z,1443536102.629 [DeadReckonUsingMultipleVelocitySources](INFO): Will consider orientation measurement stale after 120s.
2015-09-29T14:15:02.630Z,1443536102.630 [DeadReckonUsingMultipleVelocitySources](INFO): Will consider velocity measurement stale after 20s.
2015-09-29T14:15:02.630Z,1443536102.630 [DeadReckonUsingSpeedCalculator](DEBUG): Initializing DeadReckonUsingSpeedCalculator component.
2015-09-29T14:15:02.631Z,1443536102.631 [DeadReckonUsingSpeedCalculator](INFO): Will consider orientation measurement stale after 120s.
2015-09-29T14:15:02.631Z,1443536102.631 [DeadReckonUsingSpeedCalculator](INFO): Will consider velocity measurement stale after 20s.
2015-09-29T14:15:02.631Z,1443536102.631 [NavChart](DEBUG): Initialize NavChart Navigation.
2015-09-29T14:15:02.632Z,1443536102.632 [UniversalFixResidualReporter](DEBUG): Initializing UniversalFixResidualReporter component.
2015-09-29T14:15:02.637Z,1443536102.637 [InternalSim](DEBUG):  InternalSim initializing...
2015-09-29T14:15:02.668Z,1443536102.668 [logger ThreadHandler](INFO): Handler Thread ID is 816
2015-09-29T14:15:02.772Z,1443536102.772 [CTD_NeilBrown ThreadHandler](INFO): Handler Thread ID is 817
2015-09-29T14:15:02.773Z,1443536102.773 [WetLabsBB2FL ThreadHandler](INFO): Handler Thread ID is 818
2015-09-29T14:15:02.812Z,1443536102.812 [Radio_Surface ThreadHandler](INFO): Handler Thread ID is 819
2015-09-29T14:15:02.828Z,1443536102.828 [MissionManager](INFO): Loading Mission: Missions/Startup.xml
2015-09-29T14:15:02.849Z,1443536102.849 [NavChartDb ThreadHandler](INFO): Handler Thread ID is 820
2015-09-29T14:15:02.909Z,1443536102.909 [NavChartDb](INFO): Looking for Electronic Nav Chart files in directory: Resources
2015-09-29T14:15:02.912Z,1443536102.912 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US1WC07M.000
2015-09-29T14:15:02.912Z,1443536102.912 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US2WC11M.000
2015-09-29T14:15:02.913Z,1443536102.913 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US3CA52M.000
2015-09-29T14:15:02.913Z,1443536102.913 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US4CA60M.000
2015-09-29T14:15:02.913Z,1443536102.913 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA50M.000
2015-09-29T14:15:02.913Z,1443536102.913 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA61M.000
2015-09-29T14:15:02.913Z,1443536102.913 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA62M.000
2015-09-29T14:15:02.914Z,1443536102.914 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA83M.000
2015-09-29T14:15:03.001Z,1443536103.001 [Startup:A.GoToSurface](DEBUG): Construct GoToSurface.
2015-09-29T14:15:03.040Z,1443536103.040 [MissionManager](DEBUG): 
<?xml version="1.0" encoding="UTF-8"?>
<Mission xmlns="Tethys"
       xmlns:Control="Tethys/Control"
       xmlns:Guidance="Tethys/Guidance" 
       xmlns:Units="Tethys/Units"
       xmlns:Universal="Tethys/Universal"
       xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
       xsi:schemaLocation="Tethys http://okeanids.mbari.org/tethys/Xml/Tethys.xsd
                           Tethys/Control http://okeanids.mbari.org/tethys/Xml/Control.xsd
                           Tethys/Guidance http://okeanids.mbari.org/tethys/Xml/Guidance.xsd
                           Tethys/Units http://okeanids.mbari.org/tethys/Xml/Units.xsd
                           Tethys/Universal http://okeanids.mbari.org/tethys/Xml/Universal.xsd"
       Id="Startup">

    <Guidance:GoToSurface>
        <Progression/>
    </Guidance:GoToSurface>

    <Aggregate Id="StartupSatComms">

        <Sequence/>

        <ReadDatum>
            <Timeout Duration="P1M" />
            <Universal:latitude_fix/>
        </ReadDatum>

        <ReadDatum>
            <Timeout Duration="P1M" />
            <Universal:platform_communications/>
        </ReadDatum>

    </Aggregate>

</Mission>


2015-09-29T14:15:03.041Z,1443536103.041 [MissionManager](INFO): Loading Mission: Missions/Default.xml
2015-09-29T14:15:03.093Z,1443536103.093 [MissionManager](INFO): DefineArg Default.ElapsedSinceDefaultStarted = 0.000000 min
2015-09-29T14:15:03.094Z,1443536103.094 [Default:A.GoToSurface](DEBUG): Construct GoToSurface.
2015-09-29T14:15:03.144Z,1443536103.144 [Default:CheckIn:Read_Iridium:A_Timeout:A.Execute](DEBUG): Construct Execute.
2015-09-29T14:15:03.155Z,1443536103.155 [Default:CheckIn:C.Wait](DEBUG): Construct Wait.
2015-09-29T14:15:03.161Z,1443536103.161 [Default:D.Execute](DEBUG): Construct Execute.
2015-09-29T14:15:03.185Z,1443536103.185 [MissionManager](DEBUG): 
<?xml version="1.0" encoding="UTF-8"?>
<Mission xmlns="Tethys"
xmlns:Guidance="Tethys/Guidance"
xmlns:Units="Tethys/Units"
xmlns:Universal="Tethys/Universal"
xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
xsi:schemaLocation="Tethys http://okeanids.mbari.org/tethys/Xml/Tethys.xsd
Tethys/Guidance http://okeanids.mbari.org/tethys/Xml/Guidance.xsd
Tethys/Units http://okeanids.mbari.org/tethys/Xml/Units.xsd
Tethys/Universal http://okeanids.mbari.org/tethys/Xml/Universal.xsd"
Id="Default">

    <DefineArg Name="ElapsedSinceDefaultStarted"><Units:minute/><Value>0</Value></DefineArg>

    <Guidance:GoToSurface>
        <Progression/>
    </Guidance:GoToSurface>

    <Aggregate Id="CheckIn">

        <Sequence Repeat="288"/>

        <ReadDatum Id="Read_GPS">
            <Sequence/>
            <Timeout Duration="P5M"/>
            <Universal:time_fix/>
        </ReadDatum>

        <ReadDatum Id="Read_Iridium">
            <Sequence/>
            <Timeout Duration="P2H">
                <Guidance:Execute>
                    <Sequence/>
                    <Setting><Guidance:Execute.command/><String>Burn 300</String></Setting>
                </Guidance:Execute>
                <Syslog Severity="Critical">Dropped weight due to communications timeout.</Syslog>
            </Timeout>
            <Universal:platform_communications/>
        </ReadDatum>

        <Guidance:Wait>
            <Sequence/>
            <Setting><Guidance:Wait.duration/><Units:minute/><Value>5</Value></Setting>
        </Guidance:Wait>

        <Assign><Sequence/><Arg Name="ElapsedSinceDefaultStarted"/><Elapsed><Universal:mission_started/></Elapsed></Assign>

        <Syslog Severity="Important">Default mission has been running for <Arg Name="ElapsedSinceDefaultStarted"/><Units:minute/></Syslog>

    </Aggregate>

    <Syslog Severity="Important">Restarting logs and Default mission.</Syslog>

    <Guidance:Execute>
        <Sequence/>
        <Setting><Guidance:Execute.command/><String>restart logs</String></Setting>
    </Guidance:Execute>

</Mission>


2015-09-29T14:15:03.191Z,1443536103.191 [controlThread](DEBUG): Component order: CycleStarter,InternalSim,ISUS,PAR_Licor,AHRS_sp3003D,DataOverHttps,Depth_Keller,DropWeight,DVL_micro,NAL9602,Onboard,DAT,SCPI,PAR_Licor,Depth_Keller,DepthRateCalculator,PitchRateCalculator,SpeedCalculator,TempGradientCalculator,VerticalTemperatureHomogeneityIndexCalculator,YawRateCalculator,StratificationFrontDetector,DeadReckonUsingMultipleVelocitySources,DeadReckonUsingSpeedCalculator,NavChart,UniversalFixResidualReporter,MissionManager,VerticalControl,HorizontalControl,SpeedControl,LoopControl,BuoyancyServo,ElevatorServo,MassServo,RudderServo,ThrusterServo,SBIT,IBIT,CBIT,Reporter,LogSplitter,
2015-09-29T14:15:03.375Z,1443536103.375 [DVL_micro](INFO): Initializing
2015-09-29T14:15:03.549Z,1443536103.549 [DeadReckonUsingMultipleVelocitySources](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T14:15:03.572Z,1443536103.572 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T14:15:03.700Z,1443536103.700 [BuoyancyServo](DEBUG): Initializing BuoyancyServo.
2015-09-29T14:15:03.728Z,1443536103.728 [ElevatorServo](DEBUG): Initializing ElevatorServo.
2015-09-29T14:15:03.747Z,1443536103.747 [MassServo](DEBUG): Initializing MassServo.
2015-09-29T14:15:03.753Z,1443536103.753 [RudderServo](DEBUG): Initializing RudderServo.
2015-09-29T14:15:03.767Z,1443536103.767 [ThrusterServo](DEBUG): Initializing ThrusterServo.
2015-09-29T14:15:04.002Z,1443536104.002 [DeadReckonUsingMultipleVelocitySources](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T14:15:04.003Z,1443536104.003 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T14:15:13.047Z,1443536113.047 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T14:15:13.351Z,1443536113.351 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T14:15:13.507Z,1443536113.507 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T14:15:13.906Z,1443536113.906 [DataOverHttps](INFO): setting available, lastComms_.elapsed()=0.003100
2015-09-29T14:15:13.910Z,1443536113.910 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T14:15:14.304Z,1443536114.304 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T14:15:14.705Z,1443536114.705 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T14:15:15.105Z,1443536115.105 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T14:15:15.504Z,1443536115.504 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T14:15:15.915Z,1443536115.915 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T14:15:16.305Z,1443536116.305 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T14:15:16.703Z,1443536116.703 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T14:15:17.104Z,1443536117.104 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T14:15:17.504Z,1443536117.504 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T14:15:17.904Z,1443536117.904 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T14:15:18.303Z,1443536118.303 [NAL9602](INFO): No messages in MT queue
2015-09-29T14:15:18.304Z,1443536118.304 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T14:15:18.706Z,1443536118.706 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T14:15:19.105Z,1443536119.105 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T14:15:19.505Z,1443536119.505 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T14:15:19.904Z,1443536119.904 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T14:15:20.304Z,1443536120.304 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T14:15:20.704Z,1443536120.704 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T14:15:21.106Z,1443536121.106 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T14:15:21.505Z,1443536121.505 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T14:15:21.903Z,1443536121.903 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T14:15:22.304Z,1443536122.304 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T14:15:22.704Z,1443536122.704 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T14:15:23.104Z,1443536123.104 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T14:15:23.119Z,1443536123.119 [SBIT](IMPORTANT): Beginning Startup BIT
2015-09-29T14:15:23.504Z,1443536123.504 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T14:15:23.905Z,1443536123.905 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T14:15:24.304Z,1443536124.304 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T14:15:24.704Z,1443536124.704 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T14:15:25.104Z,1443536125.104 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T14:15:25.504Z,1443536125.504 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T14:15:25.905Z,1443536125.905 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T14:15:26.304Z,1443536126.304 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T14:15:26.704Z,1443536126.704 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T14:15:27.105Z,1443536127.105 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T14:15:27.504Z,1443536127.504 [D