2015-09-29T13:59:06.642Z,1443535146.642 [Supervisor](DEBUG): Initializing supervisor.
2015-09-29T13:59:06.645Z,1443535146.645 [SyncHandler](DEBUG): Created PCaller Thread at 4034C4E0
2015-09-29T13:59:06.646Z,1443535146.646 [SyncHandler](INFO): Protected caller Thread ID is 761
2015-09-29T13:59:06.646Z,1443535146.646 [ComponentRegistry](DEBUG): Component "controlThread" handled in its own thread.
2015-09-29T13:59:06.649Z,1443535146.649 [controlThread ThreadHandler](DEBUG): Created PCaller Thread at 4037C4E0
2015-09-29T13:59:06.649Z,1443535146.649 [controlThread ThreadHandler](INFO): Protected caller Thread ID is 762
2015-09-29T13:59:06.652Z,1443535146.652 [ComponentRegistry](DEBUG): SyncComponent "CycleStarter" handled in the control thread.
2015-09-29T13:59:06.665Z,1443535146.665 [ComponentRegistry](DEBUG): Component "CommandLine" handled in its own thread.
2015-09-29T13:59:06.669Z,1443535146.669 [CommandLine ThreadHandler](DEBUG): Created PCaller Thread at 403AC4E0
2015-09-29T13:59:06.669Z,1443535146.669 [CommandLine ThreadHandler](INFO): Protected caller Thread ID is 763
2015-09-29T13:59:06.670Z,1443535146.670 [ComponentRegistry](DEBUG): Component "logger" handled in its own thread.
2015-09-29T13:59:06.673Z,1443535146.673 [logger ThreadHandler](DEBUG): Created PCaller Thread at 403DC4E0
2015-09-29T13:59:06.673Z,1443535146.673 [logger ThreadHandler](INFO): Protected caller Thread ID is 764
2015-09-29T13:59:06.675Z,1443535146.675 [ComponentRegistry](DEBUG): SyncComponent "LogSplitter" handled in the control thread.
2015-09-29T13:59:06.676Z,1443535146.676 [Supervisor](INFO): Looking for Config files in directory: Config/
2015-09-29T13:59:06.679Z,1443535146.679 [Supervisor](INFO): Opening Config file at: Config/Control.cfg
2015-09-29T13:59:07.061Z,1443535147.061 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Control
2015-09-29T13:59:07.065Z,1443535147.065 [Supervisor](INFO): Opening Config file at: Config/BIT.cfg
2015-09-29T13:59:07.253Z,1443535147.253 [ComponentRegistry](DEBUG): Loaded Config Component "Config/BIT
2015-09-29T13:59:07.255Z,1443535147.255 [Supervisor](INFO): Opening Config file at: Config/Derivation.cfg
2015-09-29T13:59:07.401Z,1443535147.401 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Derivation
2015-09-29T13:59:07.402Z,1443535147.402 [Supervisor](INFO): Opening Config file at: Config/Estimation.cfg
2015-09-29T13:59:07.549Z,1443535147.549 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Estimation
2015-09-29T13:59:07.550Z,1443535147.550 [Supervisor](INFO): Opening Config file at: Config/Guidance.cfg
2015-09-29T13:59:07.650Z,1443535147.650 [Supervisor](INFO): Opening Config file at: Config/Navigation.cfg
2015-09-29T13:59:07.869Z,1443535147.869 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Navigation
2015-09-29T13:59:07.870Z,1443535147.870 [Supervisor](INFO): Opening Config file at: Config/Sample.cfg
2015-09-29T13:59:07.965Z,1443535147.965 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Sample
2015-09-29T13:59:07.966Z,1443535147.966 [Supervisor](INFO): Opening Config file at: Config/Science.cfg
2015-09-29T13:59:08.278Z,1443535148.278 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Science
2015-09-29T13:59:08.279Z,1443535148.279 [Supervisor](INFO): Opening Config file at: Config/Sensor.cfg
2015-09-29T13:59:08.678Z,1443535148.678 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Sensor
2015-09-29T13:59:08.679Z,1443535148.679 [Supervisor](INFO): Opening Config file at: Config/Servo.cfg
2015-09-29T13:59:09.030Z,1443535149.030 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Servo
2015-09-29T13:59:09.032Z,1443535149.032 [Supervisor](INFO): Opening Config file at: Config/Simulator.cfg
2015-09-29T13:59:09.622Z,1443535149.622 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Simulator
2015-09-29T13:59:09.623Z,1443535149.623 [Supervisor](INFO): Opening Config file at: Config/logger.cfg
2015-09-29T13:59:09.854Z,1443535149.854 [ComponentRegistry](DEBUG): Loaded Config Component "Config/logger
2015-09-29T13:59:09.855Z,1443535149.855 [Supervisor](INFO): Opening Config file at: Config/secure.cfg
2015-09-29T13:59:09.973Z,1443535149.973 [ComponentRegistry](DEBUG): Loaded Config Component "Config/secure
2015-09-29T13:59:09.974Z,1443535149.974 [Supervisor](INFO): Opening Config file at: Config/vehicle.cfg
2015-09-29T13:59:10.506Z,1443535150.506 [ComponentRegistry](DEBUG): Loaded Config Component "Config/vehicle
2015-09-29T13:59:10.507Z,1443535150.507 [Supervisor](INFO): Opening Config file at: Config/workSite.cfg
2015-09-29T13:59:10.633Z,1443535150.633 [ComponentRegistry](DEBUG): Loaded Config Component "Config/workSite
2015-09-29T13:59:10.635Z,1443535150.635 [Supervisor](INFO): Looking for Config files in directory: Config/(none)/
2015-09-29T13:59:10.635Z,1443535150.635 [Supervisor](FAULT): Ignoring configuration overrides from Data/persisted.cfg
2015-09-29T13:59:10.639Z,1443535150.639 [Module Loader](DEBUG): Loading Module at Modules/Control.so
2015-09-29T13:59:10.716Z,1443535150.716 [VerticalControl](DEBUG): Construct VerticalControl.
2015-09-29T13:59:10.851Z,1443535150.851 [VerticalControl] Loaded
2015-09-29T13:59:10.852Z,1443535150.852 [ComponentRegistry](DEBUG): SyncComponent "VerticalControl" handled in the control thread.
2015-09-29T13:59:10.852Z,1443535150.852 [HorizontalControl](DEBUG): Construct HorizontalControl.
2015-09-29T13:59:10.934Z,1443535150.934 [HorizontalControl] Loaded
2015-09-29T13:59:10.934Z,1443535150.934 [ComponentRegistry](DEBUG): SyncComponent "HorizontalControl" handled in the control thread.
2015-09-29T13:59:10.934Z,1443535150.934 [SpeedControl](DEBUG): Construct SpeedControl.
2015-09-29T13:59:10.940Z,1443535150.940 [SpeedControl] Loaded
2015-09-29T13:59:10.945Z,1443535150.945 [ComponentRegistry](DEBUG): SyncComponent "SpeedControl" handled in the control thread.
2015-09-29T13:59:10.945Z,1443535150.945 [LoopControl](DEBUG): Construct LoopControl.
2015-09-29T13:59:10.946Z,1443535150.946 [LoopControl] Loaded
2015-09-29T13:59:10.946Z,1443535150.946 [ComponentRegistry](DEBUG): SyncComponent "LoopControl" handled in the control thread.
2015-09-29T13:59:10.947Z,1443535150.947 [Module Loader](DEBUG): Loaded Module: Control (Contains the Control components, such as Depth, Heading, and Speed Control)
2015-09-29T13:59:10.947Z,1443535150.947 [Module Loader](DEBUG): Loading Module at Modules/BIT.so
2015-09-29T13:59:11.107Z,1443535151.107 [SBIT](DEBUG): Construct Startup Built In Test.
2015-09-29T13:59:11.123Z,1443535151.123 [SBIT] Loaded
2015-09-29T13:59:11.124Z,1443535151.124 [ComponentRegistry](DEBUG): SyncComponent "SBIT" handled in the control thread.
2015-09-29T13:59:11.124Z,1443535151.124 [IBIT](DEBUG): Construct Initiated Built In Test.
2015-09-29T13:59:11.154Z,1443535151.154 [IBIT] Loaded
2015-09-29T13:59:11.154Z,1443535151.154 [ComponentRegistry](DEBUG): SyncComponent "IBIT" handled in the control thread.
2015-09-29T13:59:11.161Z,1443535151.161 [CBIT](DEBUG): Construct Continuous Built In Test.
2015-09-29T13:59:11.312Z,1443535151.312 [CBIT] Loaded
2015-09-29T13:59:11.312Z,1443535151.312 [ComponentRegistry](DEBUG): SyncComponent "CBIT" handled in the control thread.
2015-09-29T13:59:11.317Z,1443535151.317 [Module Loader](DEBUG): Loaded Module: BIT (Contains the BuiltInTest components, such as C Built In Test)
2015-09-29T13:59:11.318Z,1443535151.318 [Module Loader](DEBUG): Loading Module at Modules/Derivation.so
2015-09-29T13:59:11.355Z,1443535151.355 [DepthRateCalculator] Loaded
2015-09-29T13:59:11.355Z,1443535151.355 [ComponentRegistry](DEBUG): SyncComponent "DepthRateCalculator" handled in the control thread.
2015-09-29T13:59:11.364Z,1443535151.364 [PitchRateCalculator] Loaded
2015-09-29T13:59:11.365Z,1443535151.365 [ComponentRegistry](DEBUG): SyncComponent "PitchRateCalculator" handled in the control thread.
2015-09-29T13:59:11.376Z,1443535151.376 [SpeedCalculator] Loaded
2015-09-29T13:59:11.377Z,1443535151.377 [ComponentRegistry](DEBUG): SyncComponent "SpeedCalculator" handled in the control thread.
2015-09-29T13:59:11.394Z,1443535151.394 [TempGradientCalculator] Loaded
2015-09-29T13:59:11.394Z,1443535151.394 [ComponentRegistry](DEBUG): SyncComponent "TempGradientCalculator" handled in the control thread.
2015-09-29T13:59:11.416Z,1443535151.416 [VerticalTemperatureHomogeneityIndexCalculator] Loaded
2015-09-29T13:59:11.416Z,1443535151.416 [ComponentRegistry](DEBUG): SyncComponent "VerticalTemperatureHomogeneityIndexCalculator" handled in the control thread.
2015-09-29T13:59:11.421Z,1443535151.421 [YawRateCalculator] Loaded
2015-09-29T13:59:11.422Z,1443535151.422 [ComponentRegistry](DEBUG): SyncComponent "YawRateCalculator" handled in the control thread.
2015-09-29T13:59:11.422Z,1443535151.422 [Module Loader](DEBUG): Loaded Module: Derivation (Contains the base derivation components)
2015-09-29T13:59:11.423Z,1443535151.423 [Module Loader](DEBUG): Loading Module at Modules/Estimation.so
2015-09-29T13:59:11.545Z,1443535151.545 [StratificationFrontDetector](INFO): threshold set to: 0.399988 degC
2015-09-29T13:59:11.545Z,1443535151.545 [StratificationFrontDetector](DEBUG): (re)initializing
2015-09-29T13:59:11.545Z,1443535151.545 [StratificationFrontDetector] Loaded
2015-09-29T13:59:11.546Z,1443535151.546 [ComponentRegistry](DEBUG): SyncComponent "StratificationFrontDetector" handled in the control thread.
2015-09-29T13:59:11.546Z,1443535151.546 [Module Loader](DEBUG): Loaded Module: Estimation (Contains the base estimation components)
2015-09-29T13:59:11.547Z,1443535151.547 [Module Loader](DEBUG): Loading Module at Modules/Guidance.so
2015-09-29T13:59:11.839Z,1443535151.839 [Module Loader](DEBUG): Loaded Module: Guidance (Contains behaviors and commands)
2015-09-29T13:59:11.840Z,1443535151.840 [Module Loader](DEBUG): Loading Module at Modules/Navigation.so
2015-09-29T13:59:11.972Z,1443535151.972 [DeadReckonUsingMultipleVelocitySources] Loaded
2015-09-29T13:59:11.972Z,1443535151.972 [ComponentRegistry](DEBUG): SyncComponent "DeadReckonUsingMultipleVelocitySources" handled in the control thread.
2015-09-29T13:59:12.033Z,1443535152.033 [DeadReckonUsingSpeedCalculator] Loaded
2015-09-29T13:59:12.033Z,1443535152.033 [ComponentRegistry](DEBUG): SyncComponent "DeadReckonUsingSpeedCalculator" handled in the control thread.
2015-09-29T13:59:12.055Z,1443535152.055 [NavChart] Loaded
2015-09-29T13:59:12.055Z,1443535152.055 [ComponentRegistry](DEBUG): SyncComponent "NavChart" handled in the control thread.
2015-09-29T13:59:12.061Z,1443535152.061 [UniversalFixResidualReporter] Loaded
2015-09-29T13:59:12.061Z,1443535152.061 [ComponentRegistry](DEBUG): SyncComponent "UniversalFixResidualReporter" handled in the control thread.
2015-09-29T13:59:12.061Z,1443535152.061 [Module Loader](DEBUG): Loaded Module: Navigation (Contains the base navigation components)
2015-09-29T13:59:12.062Z,1443535152.062 [Module Loader](DEBUG): Loading Module at Modules/Sample.so
2015-09-29T13:59:12.071Z,1443535152.071 [Module Loader](DEBUG): Loaded Module: Sample (This is a Sample Module of Sample Components)
2015-09-29T13:59:12.071Z,1443535152.071 [Module Loader](DEBUG): Loading Module at Modules/Science.so
2015-09-29T13:59:12.374Z,1443535152.374 [CTD_NeilBrown] Loaded
2015-09-29T13:59:12.374Z,1443535152.374 [ComponentRegistry](DEBUG): Component "CTD_NeilBrown" handled in its own thread.
2015-09-29T13:59:12.377Z,1443535152.377 [CTD_NeilBrown ThreadHandler](DEBUG): Created PCaller Thread at 4059D4E0
2015-09-29T13:59:12.377Z,1443535152.377 [CTD_NeilBrown ThreadHandler](INFO): Protected caller Thread ID is 810
2015-09-29T13:59:12.390Z,1443535152.390 [ISUS] Loaded
2015-09-29T13:59:12.390Z,1443535152.390 [ComponentRegistry](DEBUG): SyncComponent "ISUS" handled in the control thread.
2015-09-29T13:59:12.405Z,1443535152.405 [PAR_Licor] Loaded
2015-09-29T13:59:12.405Z,1443535152.405 [ComponentRegistry](DEBUG): SyncComponent "PAR_Licor" handled in the control thread.
2015-09-29T13:59:12.465Z,1443535152.465 [WetLabsBB2FL] Loaded
2015-09-29T13:59:12.466Z,1443535152.466 [ComponentRegistry](DEBUG): Component "WetLabsBB2FL" handled in its own thread.
2015-09-29T13:59:12.469Z,1443535152.469 [WetLabsBB2FL ThreadHandler](DEBUG): Created PCaller Thread at 405CD4E0
2015-09-29T13:59:12.469Z,1443535152.469 [WetLabsBB2FL ThreadHandler](INFO): Protected caller Thread ID is 811
2015-09-29T13:59:12.470Z,1443535152.470 [Module Loader](DEBUG): Loaded Module: Science (Contains the science components)
2015-09-29T13:59:12.470Z,1443535152.470 [Module Loader](DEBUG): Loading Module at Modules/Sensor.so
2015-09-29T13:59:13.195Z,1443535153.195 [AHRS_sp3003D] Loaded
2015-09-29T13:59:13.196Z,1443535153.196 [ComponentRegistry](DEBUG): SyncComponent "AHRS_sp3003D" handled in the control thread.
2015-09-29T13:59:13.395Z,1443535153.395 [DataOverHttps] Loaded
2015-09-29T13:59:13.395Z,1443535153.395 [ComponentRegistry](DEBUG): SyncComponent "DataOverHttps" handled in the control thread.
2015-09-29T13:59:13.413Z,1443535153.413 [Depth_Keller] Loaded
2015-09-29T13:59:13.413Z,1443535153.413 [ComponentRegistry](DEBUG): SyncComponent "Depth_Keller" handled in the control thread.
2015-09-29T13:59:13.418Z,1443535153.418 [DropWeight] Loaded
2015-09-29T13:59:13.418Z,1443535153.418 [ComponentRegistry](DEBUG): SyncComponent "DropWeight" handled in the control thread.
2015-09-29T13:59:13.571Z,1443535153.571 [DVL_micro] Loaded
2015-09-29T13:59:13.571Z,1443535153.571 [ComponentRegistry](DEBUG): SyncComponent "DVL_micro" handled in the control thread.
2015-09-29T13:59:13.680Z,1443535153.680 [NAL9602] Loaded
2015-09-29T13:59:13.680Z,1443535153.680 [ComponentRegistry](DEBUG): SyncComponent "NAL9602" handled in the control thread.
2015-09-29T13:59:13.727Z,1443535153.727 [Onboard] Loaded
2015-09-29T13:59:13.728Z,1443535153.728 [ComponentRegistry](DEBUG): SyncComponent "Onboard" handled in the control thread.
2015-09-29T13:59:13.739Z,1443535153.739 [Radio_Surface] Loaded
2015-09-29T13:59:13.740Z,1443535153.740 [ComponentRegistry](DEBUG): Component "Radio_Surface" handled in its own thread.
2015-09-29T13:59:13.745Z,1443535153.745 [Radio_Surface ThreadHandler](DEBUG): Created PCaller Thread at 408114E0
2015-09-29T13:59:13.745Z,1443535153.745 [Radio_Surface ThreadHandler](INFO): Protected caller Thread ID is 812
2015-09-29T13:59:13.901Z,1443535153.901 [DAT] Loaded
2015-09-29T13:59:13.901Z,1443535153.901 [ComponentRegistry](DEBUG): SyncComponent "DAT" handled in the control thread.
2015-09-29T13:59:13.908Z,1443535153.908 [SCPI] Loaded
2015-09-29T13:59:13.908Z,1443535153.908 [ComponentRegistry](DEBUG): SyncComponent "SCPI" handled in the control thread.
2015-09-29T13:59:13.909Z,1443535153.909 [Module Loader](DEBUG): Loaded Module: Sensor (Contains the sensor components)
2015-09-29T13:59:13.910Z,1443535153.910 [Module Loader](DEBUG): Loading Module at Modules/Servo.so
2015-09-29T13:59:14.042Z,1443535154.042 [BuoyancyServo] Loaded
2015-09-29T13:59:14.042Z,1443535154.042 [ComponentRegistry](DEBUG): SyncComponent "BuoyancyServo" handled in the control thread.
2015-09-29T13:59:14.055Z,1443535154.055 [ElevatorServo] Loaded
2015-09-29T13:59:14.056Z,1443535154.056 [ComponentRegistry](DEBUG): SyncComponent "ElevatorServo" handled in the control thread.
2015-09-29T13:59:14.071Z,1443535154.071 [MassServo] Loaded
2015-09-29T13:59:14.072Z,1443535154.072 [ComponentRegistry](DEBUG): SyncComponent "MassServo" handled in the control thread.
2015-09-29T13:59:14.084Z,1443535154.084 [RudderServo] Loaded
2015-09-29T13:59:14.084Z,1443535154.084 [ComponentRegistry](DEBUG): SyncComponent "RudderServo" handled in the control thread.
2015-09-29T13:59:14.100Z,1443535154.100 [ThrusterServo] Loaded
2015-09-29T13:59:14.100Z,1443535154.100 [ComponentRegistry](DEBUG): SyncComponent "ThrusterServo" handled in the control thread.
2015-09-29T13:59:14.100Z,1443535154.100 [Module Loader](DEBUG): Loaded Module: Servo (This is the module containing motor controllers)
2015-09-29T13:59:14.101Z,1443535154.101 [Module Loader](DEBUG): Loading Module at Modules/Simulator.so
2015-09-29T13:59:14.303Z,1443535154.303 [InternalSim] Loaded
2015-09-29T13:59:14.304Z,1443535154.304 [ComponentRegistry](DEBUG): SyncComponent "InternalSim" handled in the control thread.
2015-09-29T13:59:14.304Z,1443535154.304 [Module Loader](DEBUG): Loaded Module: Simulator (This is the module containing the Simulator)
2015-09-29T13:59:14.305Z,1443535154.305 [Module Loader](DEBUG): Loading Module at Modules/Trigger.so
2015-09-29T13:59:14.347Z,1443535154.347 [Module Loader](DEBUG): Loaded Module: Trigger (Contains triggers for use in missions)
2015-09-29T13:59:14.351Z,1443535154.351 [ComponentRegistry](DEBUG): SyncComponent "MissionManager" handled in the control thread.
2015-09-29T13:59:14.352Z,1443535154.352 [ComponentRegistry](DEBUG): SyncComponent "Reporter" handled in the control thread.
2015-09-29T13:59:14.359Z,1443535154.359 [ComponentRegistry](DEBUG): Component "NavChartDb" handled in its own thread.
2015-09-29T13:59:14.361Z,1443535154.361 [NavChartDb ThreadHandler](DEBUG): Created PCaller Thread at 408BF4E0
2015-09-29T13:59:14.361Z,1443535154.361 [NavChartDb ThreadHandler](INFO): Protected caller Thread ID is 813
2015-09-29T13:59:14.366Z,1443535154.366 [Supervisor](INFO): Main Thread ID is 760
2015-09-29T13:59:14.366Z,1443535154.366 [Supervisor](DEBUG): Running supervisor.
2015-09-29T13:59:14.367Z,1443535154.367 [CommandLine ThreadHandler](INFO): Handler Thread ID is 814
2015-09-29T13:59:14.373Z,1443535154.373 [controlThread ThreadHandler](INFO): Handler Thread ID is 815
2015-09-29T13:59:14.374Z,1443535154.374 [controlThread](DEBUG): Initializing ControlThread
2015-09-29T13:59:14.375Z,1443535154.375 [VerticalControl](DEBUG): Initialize VerticalControlComponent.
2015-09-29T13:59:14.376Z,1443535154.376 [HorizontalControl](DEBUG): Initialize HorizontalControlComponent.
2015-09-29T13:59:14.377Z,1443535154.377 [SpeedControl](DEBUG): Initialize SpeedControlComponent.
2015-09-29T13:59:14.378Z,1443535154.378 [LoopControl](DEBUG): Initialize LoopControlComponent.
2015-09-29T13:59:14.378Z,1443535154.378 [SBIT](INFO): Initialize SBIT Component.
2015-09-29T13:59:14.379Z,1443535154.379 [SBIT](IMPORTANT): Tethys CM Info: SVN revision:12634
2015-09-29T13:59:14.380Z,1443535154.380 [SBIT](INFO): Kernel Reporting Different Release From Configuration.
Kernel Expected: 2.6.32-45-generic-pae
Kernel Reported: 2.6.27.8
2015-09-29T13:59:14.380Z,1443535154.380 [SBIT](INFO): Kernel Reporting Different Version From Configuration.
Kernel Expected: #102-Ubuntu SMP Wed Jan 2 22:10:16 UTC 2013
Kernel Reported: #641 PREEMPT Mon Sep 28 16:45:10 PDT 2015
2015-09-29T13:59:14.381Z,1443535154.381 [SBIT](INFO): Beginning SBIT in 20.000000 seconds.
2015-09-29T13:59:14.382Z,1443535154.382 [IBIT](INFO): Initialize IBIT Component.
2015-09-29T13:59:14.383Z,1443535154.383 [CBIT](DEBUG): Initialize CBIT Component.
2015-09-29T13:59:14.383Z,1443535154.383 [CBIT](FAULT): LAST RESTART WAS UNINTENTIONAL.
2015-09-29T13:59:14.383Z,1443535154.383 [CBIT](INFO): Last reboot was NOT due to watchdog timer.
2015-09-29T13:59:14.384Z,1443535154.384 [DepthRateCalculator](DEBUG): Initializing DepthRateCalculator.
2015-09-29T13:59:14.384Z,1443535154.384 [PitchRateCalculator](DEBUG): Initializing PitchRateCalculator.
2015-09-29T13:59:14.384Z,1443535154.384 [SpeedCalculator](DEBUG): Initializing SpeedCalculator.
2015-09-29T13:59:14.385Z,1443535154.385 [TempGradientCalculator](DEBUG): Initializing TempGradientCalculator.
2015-09-29T13:59:14.385Z,1443535154.385 [VerticalTemperatureHomogeneityIndexCalculator](DEBUG): (re)initializing
2015-09-29T13:59:14.386Z,1443535154.386 [YawRateCalculator](DEBUG): Initializing YawRateCalculator.
2015-09-29T13:59:14.387Z,1443535154.387 [DeadReckonUsingMultipleVelocitySources](DEBUG): Initializing DeadReckonUsingMultipleVelocitySources component.
2015-09-29T13:59:14.387Z,1443535154.387 [DeadReckonUsingMultipleVelocitySources](INFO): Will consider orientation measurement stale after 120s.
2015-09-29T13:59:14.388Z,1443535154.388 [DeadReckonUsingMultipleVelocitySources](INFO): Will consider velocity measurement stale after 20s.
2015-09-29T13:59:14.388Z,1443535154.388 [DeadReckonUsingSpeedCalculator](DEBUG): Initializing DeadReckonUsingSpeedCalculator component.
2015-09-29T13:59:14.389Z,1443535154.389 [DeadReckonUsingSpeedCalculator](INFO): Will consider orientation measurement stale after 120s.
2015-09-29T13:59:14.389Z,1443535154.389 [DeadReckonUsingSpeedCalculator](INFO): Will consider velocity measurement stale after 20s.
2015-09-29T13:59:14.389Z,1443535154.389 [NavChart](DEBUG): Initialize NavChart Navigation.
2015-09-29T13:59:14.390Z,1443535154.390 [UniversalFixResidualReporter](DEBUG): Initializing UniversalFixResidualReporter component.
2015-09-29T13:59:14.395Z,1443535154.395 [InternalSim](DEBUG):  InternalSim initializing...
2015-09-29T13:59:14.425Z,1443535154.425 [logger ThreadHandler](INFO): Handler Thread ID is 816
2015-09-29T13:59:14.521Z,1443535154.521 [CTD_NeilBrown ThreadHandler](INFO): Handler Thread ID is 817
2015-09-29T13:59:14.529Z,1443535154.529 [WetLabsBB2FL ThreadHandler](INFO): Handler Thread ID is 818
2015-09-29T13:59:14.587Z,1443535154.587 [Radio_Surface ThreadHandler](INFO): Handler Thread ID is 819
2015-09-29T13:59:14.597Z,1443535154.597 [MissionManager](INFO): Loading Mission: Missions/Startup.xml
2015-09-29T13:59:14.609Z,1443535154.609 [NavChartDb ThreadHandler](INFO): Handler Thread ID is 820
2015-09-29T13:59:14.680Z,1443535154.680 [NavChartDb](INFO): Looking for Electronic Nav Chart files in directory: Resources
2015-09-29T13:59:14.682Z,1443535154.682 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US1WC07M.000
2015-09-29T13:59:14.683Z,1443535154.683 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US2WC11M.000
2015-09-29T13:59:14.683Z,1443535154.683 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US3CA52M.000
2015-09-29T13:59:14.683Z,1443535154.683 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US4CA60M.000
2015-09-29T13:59:14.683Z,1443535154.683 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA50M.000
2015-09-29T13:59:14.684Z,1443535154.684 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA61M.000
2015-09-29T13:59:14.684Z,1443535154.684 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA62M.000
2015-09-29T13:59:14.684Z,1443535154.684 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA83M.000
2015-09-29T13:59:14.724Z,1443535154.724 [Startup:A.GoToSurface](DEBUG): Construct GoToSurface.
2015-09-29T13:59:14.740Z,1443535154.740 [MissionManager](DEBUG): 
<?xml version="1.0" encoding="UTF-8"?>
<Mission xmlns="Tethys"
       xmlns:Control="Tethys/Control"
       xmlns:Guidance="Tethys/Guidance" 
       xmlns:Units="Tethys/Units"
       xmlns:Universal="Tethys/Universal"
       xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
       xsi:schemaLocation="Tethys http://okeanids.mbari.org/tethys/Xml/Tethys.xsd
                           Tethys/Control http://okeanids.mbari.org/tethys/Xml/Control.xsd
                           Tethys/Guidance http://okeanids.mbari.org/tethys/Xml/Guidance.xsd
                           Tethys/Units http://okeanids.mbari.org/tethys/Xml/Units.xsd
                           Tethys/Universal http://okeanids.mbari.org/tethys/Xml/Universal.xsd"
       Id="Startup">

    <Guidance:GoToSurface>
        <Progression/>
    </Guidance:GoToSurface>

    <Aggregate Id="StartupSatComms">

        <Sequence/>

        <ReadDatum>
            <Timeout Duration="P1M" />
            <Universal:latitude_fix/>
        </ReadDatum>

        <ReadDatum>
            <Timeout Duration="P1M" />
            <Universal:platform_communications/>
        </ReadDatum>

    </Aggregate>

</Mission>


2015-09-29T13:59:14.749Z,1443535154.749 [MissionManager](INFO): Loading Mission: Missions/Default.xml
2015-09-29T13:59:14.799Z,1443535154.799 [MissionManager](INFO): DefineArg Default.ElapsedSinceDefaultStarted = 0.000000 min
2015-09-29T13:59:14.800Z,1443535154.800 [Default:A.GoToSurface](DEBUG): Construct GoToSurface.
2015-09-29T13:59:14.843Z,1443535154.843 [Default:CheckIn:Read_Iridium:A_Timeout:A.Execute](DEBUG): Construct Execute.
2015-09-29T13:59:14.859Z,1443535154.859 [Default:CheckIn:C.Wait](DEBUG): Construct Wait.
2015-09-29T13:59:14.885Z,1443535154.885 [Default:D.Execute](DEBUG): Construct Execute.
2015-09-29T13:59:14.888Z,1443535154.888 [MissionManager](DEBUG): 
<?xml version="1.0" encoding="UTF-8"?>
<Mission xmlns="Tethys"
xmlns:Guidance="Tethys/Guidance"
xmlns:Units="Tethys/Units"
xmlns:Universal="Tethys/Universal"
xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
xsi:schemaLocation="Tethys http://okeanids.mbari.org/tethys/Xml/Tethys.xsd
Tethys/Guidance http://okeanids.mbari.org/tethys/Xml/Guidance.xsd
Tethys/Units http://okeanids.mbari.org/tethys/Xml/Units.xsd
Tethys/Universal http://okeanids.mbari.org/tethys/Xml/Universal.xsd"
Id="Default">

    <DefineArg Name="ElapsedSinceDefaultStarted"><Units:minute/><Value>0</Value></DefineArg>

    <Guidance:GoToSurface>
        <Progression/>
    </Guidance:GoToSurface>

    <Aggregate Id="CheckIn">

        <Sequence Repeat="288"/>

        <ReadDatum Id="Read_GPS">
            <Sequence/>
            <Timeout Duration="P5M"/>
            <Universal:time_fix/>
        </ReadDatum>

        <ReadDatum Id="Read_Iridium">
            <Sequence/>
            <Timeout Duration="P2H">
                <Guidance:Execute>
                    <Sequence/>
                    <Setting><Guidance:Execute.command/><String>Burn 300</String></Setting>
                </Guidance:Execute>
                <Syslog Severity="Critical">Dropped weight due to communications timeout.</Syslog>
            </Timeout>
            <Universal:platform_communications/>
        </ReadDatum>

        <Guidance:Wait>
            <Sequence/>
            <Setting><Guidance:Wait.duration/><Units:minute/><Value>5</Value></Setting>
        </Guidance:Wait>

        <Assign><Sequence/><Arg Name="ElapsedSinceDefaultStarted"/><Elapsed><Universal:mission_started/></Elapsed></Assign>

        <Syslog Severity="Important">Default mission has been running for <Arg Name="ElapsedSinceDefaultStarted"/><Units:minute/></Syslog>

    </Aggregate>

    <Syslog Severity="Important">Restarting logs and Default mission.</Syslog>

    <Guidance:Execute>
        <Sequence/>
        <Setting><Guidance:Execute.command/><String>restart logs</String></Setting>
    </Guidance:Execute>

</Mission>


2015-09-29T13:59:14.898Z,1443535154.898 [controlThread](DEBUG): Component order: CycleStarter,InternalSim,ISUS,PAR_Licor,AHRS_sp3003D,DataOverHttps,Depth_Keller,DropWeight,DVL_micro,NAL9602,Onboard,DAT,SCPI,PAR_Licor,Depth_Keller,DepthRateCalculator,PitchRateCalculator,SpeedCalculator,TempGradientCalculator,VerticalTemperatureHomogeneityIndexCalculator,YawRateCalculator,StratificationFrontDetector,DeadReckonUsingMultipleVelocitySources,DeadReckonUsingSpeedCalculator,NavChart,UniversalFixResidualReporter,MissionManager,VerticalControl,HorizontalControl,SpeedControl,LoopControl,BuoyancyServo,ElevatorServo,MassServo,RudderServo,ThrusterServo,SBIT,IBIT,CBIT,Reporter,LogSplitter,
2015-09-29T13:59:15.104Z,1443535155.104 [DVL_micro](INFO): Initializing
2015-09-29T13:59:15.269Z,1443535155.269 [DeadReckonUsingMultipleVelocitySources](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T13:59:15.285Z,1443535155.285 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T13:59:15.394Z,1443535155.394 [BuoyancyServo](DEBUG): Initializing BuoyancyServo.
2015-09-29T13:59:15.409Z,1443535155.409 [ElevatorServo](DEBUG): Initializing ElevatorServo.
2015-09-29T13:59:15.425Z,1443535155.425 [MassServo](DEBUG): Initializing MassServo.
2015-09-29T13:59:15.438Z,1443535155.438 [RudderServo](DEBUG): Initializing RudderServo.
2015-09-29T13:59:15.449Z,1443535155.449 [ThrusterServo](DEBUG): Initializing ThrusterServo.
2015-09-29T13:59:15.722Z,1443535155.722 [DeadReckonUsingMultipleVelocitySources](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T13:59:15.723Z,1443535155.723 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T13:59:24.740Z,1443535164.740 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T13:59:25.059Z,1443535165.059 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T13:59:25.195Z,1443535165.195 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T13:59:25.596Z,1443535165.596 [DataOverHttps](INFO): setting available, lastComms_.elapsed()=0.003000
2015-09-29T13:59:25.600Z,1443535165.600 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T13:59:25.994Z,1443535165.994 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T13:59:26.395Z,1443535166.395 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T13:59:26.794Z,1443535166.794 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T13:59:27.194Z,1443535167.194 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T13:59:27.593Z,1443535167.593 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T13:59:27.994Z,1443535167.994 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T13:59:28.393Z,1443535168.393 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T13:59:28.795Z,1443535168.795 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T13:59:29.199Z,1443535169.199 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T13:59:29.601Z,1443535169.601 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T13:59:29.998Z,1443535169.998 [NAL9602](INFO): No messages in MT queue
2015-09-29T13:59:29.999Z,1443535169.999 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T13:59:30.393Z,1443535170.393 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T13:59:30.804Z,1443535170.804 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T13:59:31.203Z,1443535171.203 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T13:59:31.603Z,1443535171.603 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T13:59:31.994Z,1443535171.994 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T13:59:32.393Z,1443535172.393 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T13:59:32.793Z,1443535172.793 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T13:59:33.194Z,1443535173.194 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T13:59:33.593Z,1443535173.593 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T13:59:33.994Z,1443535173.994 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T13:59:34.393Z,1443535174.393 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T13:59:34.793Z,1443535174.793 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T13:59:34.820Z,1443535174.820 [SBIT](IMPORTANT): Beginning Startup BIT
2015-09-29T13:59:35.193Z,1443535175.193 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T13:59:35.593Z,1443535175.593 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T13:59:35.993Z,1443535175.993 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T13:59:36.394Z,1443535176.394 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T13:59:36.795Z,1443535176.795 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T13:59:37.194Z,1443535177.194 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T13:59:37.605Z,1443535177.605 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T13:59:37.993Z,1443535177.993 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T13:59:38.394Z,1443535178.394 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T13:59:38.793Z,1443535178.793 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T13:59:39.194Z,1443535179.194 [D