2015-09-29T13:27:27.706Z,1443533247.706 [Supervisor](DEBUG): Initializing supervisor.
2015-09-29T13:27:27.710Z,1443533247.710 [SyncHandler](DEBUG): Created PCaller Thread at 4034C4E0
2015-09-29T13:27:27.711Z,1443533247.711 [SyncHandler](INFO): Protected caller Thread ID is 762
2015-09-29T13:27:27.711Z,1443533247.711 [ComponentRegistry](DEBUG): Component "controlThread" handled in its own thread.
2015-09-29T13:27:27.714Z,1443533247.714 [controlThread ThreadHandler](DEBUG): Created PCaller Thread at 4037C4E0
2015-09-29T13:27:27.714Z,1443533247.714 [controlThread ThreadHandler](INFO): Protected caller Thread ID is 763
2015-09-29T13:27:27.717Z,1443533247.717 [ComponentRegistry](DEBUG): SyncComponent "CycleStarter" handled in the control thread.
2015-09-29T13:27:27.731Z,1443533247.731 [ComponentRegistry](DEBUG): Component "CommandLine" handled in its own thread.
2015-09-29T13:27:27.734Z,1443533247.734 [CommandLine ThreadHandler](DEBUG): Created PCaller Thread at 403AC4E0
2015-09-29T13:27:27.734Z,1443533247.734 [CommandLine ThreadHandler](INFO): Protected caller Thread ID is 764
2015-09-29T13:27:27.735Z,1443533247.735 [ComponentRegistry](DEBUG): Component "logger" handled in its own thread.
2015-09-29T13:27:27.738Z,1443533247.738 [logger ThreadHandler](DEBUG): Created PCaller Thread at 403DC4E0
2015-09-29T13:27:27.738Z,1443533247.738 [logger ThreadHandler](INFO): Protected caller Thread ID is 765
2015-09-29T13:27:27.741Z,1443533247.741 [ComponentRegistry](DEBUG): SyncComponent "LogSplitter" handled in the control thread.
2015-09-29T13:27:27.741Z,1443533247.741 [Supervisor](INFO): Looking for Config files in directory: Config/
2015-09-29T13:27:27.745Z,1443533247.745 [Supervisor](INFO): Opening Config file at: Config/Control.cfg
2015-09-29T13:27:28.169Z,1443533248.169 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Control
2015-09-29T13:27:28.171Z,1443533248.171 [Supervisor](INFO): Opening Config file at: Config/BIT.cfg
2015-09-29T13:27:28.367Z,1443533248.367 [ComponentRegistry](DEBUG): Loaded Config Component "Config/BIT
2015-09-29T13:27:28.369Z,1443533248.369 [Supervisor](INFO): Opening Config file at: Config/Derivation.cfg
2015-09-29T13:27:28.519Z,1443533248.519 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Derivation
2015-09-29T13:27:28.519Z,1443533248.519 [Supervisor](INFO): Opening Config file at: Config/Estimation.cfg
2015-09-29T13:27:28.674Z,1443533248.674 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Estimation
2015-09-29T13:27:28.674Z,1443533248.674 [Supervisor](INFO): Opening Config file at: Config/Guidance.cfg
2015-09-29T13:27:28.774Z,1443533248.774 [Supervisor](INFO): Opening Config file at: Config/Navigation.cfg
2015-09-29T13:27:29.003Z,1443533249.003 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Navigation
2015-09-29T13:27:29.004Z,1443533249.004 [Supervisor](INFO): Opening Config file at: Config/Sample.cfg
2015-09-29T13:27:29.103Z,1443533249.103 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Sample
2015-09-29T13:27:29.103Z,1443533249.103 [Supervisor](INFO): Opening Config file at: Config/Science.cfg
2015-09-29T13:27:29.433Z,1443533249.433 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Science
2015-09-29T13:27:29.434Z,1443533249.434 [Supervisor](INFO): Opening Config file at: Config/Sensor.cfg
2015-09-29T13:27:29.855Z,1443533249.855 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Sensor
2015-09-29T13:27:29.856Z,1443533249.856 [Supervisor](INFO): Opening Config file at: Config/Servo.cfg
2015-09-29T13:27:30.229Z,1443533250.229 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Servo
2015-09-29T13:27:30.231Z,1443533250.231 [Supervisor](INFO): Opening Config file at: Config/Simulator.cfg
2015-09-29T13:27:30.864Z,1443533250.864 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Simulator
2015-09-29T13:27:30.865Z,1443533250.865 [Supervisor](INFO): Opening Config file at: Config/logger.cfg
2015-09-29T13:27:31.113Z,1443533251.113 [ComponentRegistry](DEBUG): Loaded Config Component "Config/logger
2015-09-29T13:27:31.114Z,1443533251.114 [Supervisor](INFO): Opening Config file at: Config/secure.cfg
2015-09-29T13:27:31.238Z,1443533251.238 [ComponentRegistry](DEBUG): Loaded Config Component "Config/secure
2015-09-29T13:27:31.238Z,1443533251.238 [Supervisor](INFO): Opening Config file at: Config/vehicle.cfg
2015-09-29T13:27:31.842Z,1443533251.842 [ComponentRegistry](DEBUG): Loaded Config Component "Config/vehicle
2015-09-29T13:27:31.842Z,1443533251.842 [Supervisor](INFO): Opening Config file at: Config/workSite.cfg
2015-09-29T13:27:31.975Z,1443533251.975 [ComponentRegistry](DEBUG): Loaded Config Component "Config/workSite
2015-09-29T13:27:31.977Z,1443533251.977 [Supervisor](INFO): Looking for Config files in directory: Config/(none)/
2015-09-29T13:27:31.977Z,1443533251.977 [Supervisor](FAULT): Ignoring configuration overrides from Data/persisted.cfg
2015-09-29T13:27:31.982Z,1443533251.982 [Module Loader](DEBUG): Loading Module at Modules/Control.so
2015-09-29T13:27:32.058Z,1443533252.058 [VerticalControl](DEBUG): Construct VerticalControl.
2015-09-29T13:27:32.198Z,1443533252.198 [VerticalControl] Loaded
2015-09-29T13:27:32.198Z,1443533252.198 [ComponentRegistry](DEBUG): SyncComponent "VerticalControl" handled in the control thread.
2015-09-29T13:27:32.199Z,1443533252.199 [HorizontalControl](DEBUG): Construct HorizontalControl.
2015-09-29T13:27:32.287Z,1443533252.287 [HorizontalControl] Loaded
2015-09-29T13:27:32.288Z,1443533252.288 [ComponentRegistry](DEBUG): SyncComponent "HorizontalControl" handled in the control thread.
2015-09-29T13:27:32.288Z,1443533252.288 [SpeedControl](DEBUG): Construct SpeedControl.
2015-09-29T13:27:32.295Z,1443533252.295 [SpeedControl] Loaded
2015-09-29T13:27:32.295Z,1443533252.295 [ComponentRegistry](DEBUG): SyncComponent "SpeedControl" handled in the control thread.
2015-09-29T13:27:32.296Z,1443533252.296 [LoopControl](DEBUG): Construct LoopControl.
2015-09-29T13:27:32.296Z,1443533252.296 [LoopControl] Loaded
2015-09-29T13:27:32.296Z,1443533252.296 [ComponentRegistry](DEBUG): SyncComponent "LoopControl" handled in the control thread.
2015-09-29T13:27:32.297Z,1443533252.297 [Module Loader](DEBUG): Loaded Module: Control (Contains the Control components, such as Depth, Heading, and Speed Control)
2015-09-29T13:27:32.298Z,1443533252.298 [Module Loader](DEBUG): Loading Module at Modules/BIT.so
2015-09-29T13:27:32.462Z,1443533252.462 [SBIT](DEBUG): Construct Startup Built In Test.
2015-09-29T13:27:32.475Z,1443533252.475 [SBIT] Loaded
2015-09-29T13:27:32.475Z,1443533252.475 [ComponentRegistry](DEBUG): SyncComponent "SBIT" handled in the control thread.
2015-09-29T13:27:32.476Z,1443533252.476 [IBIT](DEBUG): Construct Initiated Built In Test.
2015-09-29T13:27:32.511Z,1443533252.511 [IBIT] Loaded
2015-09-29T13:27:32.511Z,1443533252.511 [ComponentRegistry](DEBUG): SyncComponent "IBIT" handled in the control thread.
2015-09-29T13:27:32.513Z,1443533252.513 [CBIT](DEBUG): Construct Continuous Built In Test.
2015-09-29T13:27:32.674Z,1443533252.674 [CBIT] Loaded
2015-09-29T13:27:32.674Z,1443533252.674 [ComponentRegistry](DEBUG): SyncComponent "CBIT" handled in the control thread.
2015-09-29T13:27:32.675Z,1443533252.675 [Module Loader](DEBUG): Loaded Module: BIT (Contains the BuiltInTest components, such as C Built In Test)
2015-09-29T13:27:32.676Z,1443533252.676 [Module Loader](DEBUG): Loading Module at Modules/Derivation.so
2015-09-29T13:27:32.718Z,1443533252.718 [DepthRateCalculator] Loaded
2015-09-29T13:27:32.718Z,1443533252.718 [ComponentRegistry](DEBUG): SyncComponent "DepthRateCalculator" handled in the control thread.
2015-09-29T13:27:32.724Z,1443533252.724 [PitchRateCalculator] Loaded
2015-09-29T13:27:32.724Z,1443533252.724 [ComponentRegistry](DEBUG): SyncComponent "PitchRateCalculator" handled in the control thread.
2015-09-29T13:27:32.736Z,1443533252.736 [SpeedCalculator] Loaded
2015-09-29T13:27:32.736Z,1443533252.736 [ComponentRegistry](DEBUG): SyncComponent "SpeedCalculator" handled in the control thread.
2015-09-29T13:27:32.758Z,1443533252.758 [TempGradientCalculator] Loaded
2015-09-29T13:27:32.759Z,1443533252.759 [ComponentRegistry](DEBUG): SyncComponent "TempGradientCalculator" handled in the control thread.
2015-09-29T13:27:32.781Z,1443533252.781 [VerticalTemperatureHomogeneityIndexCalculator] Loaded
2015-09-29T13:27:32.781Z,1443533252.781 [ComponentRegistry](DEBUG): SyncComponent "VerticalTemperatureHomogeneityIndexCalculator" handled in the control thread.
2015-09-29T13:27:32.787Z,1443533252.787 [YawRateCalculator] Loaded
2015-09-29T13:27:32.787Z,1443533252.787 [ComponentRegistry](DEBUG): SyncComponent "YawRateCalculator" handled in the control thread.
2015-09-29T13:27:32.788Z,1443533252.788 [Module Loader](DEBUG): Loaded Module: Derivation (Contains the base derivation components)
2015-09-29T13:27:32.788Z,1443533252.788 [Module Loader](DEBUG): Loading Module at Modules/Estimation.so
2015-09-29T13:27:32.914Z,1443533252.914 [StratificationFrontDetector](INFO): threshold set to: 0.399988 degC
2015-09-29T13:27:32.914Z,1443533252.914 [StratificationFrontDetector](DEBUG): (re)initializing
2015-09-29T13:27:32.914Z,1443533252.914 [StratificationFrontDetector] Loaded
2015-09-29T13:27:32.915Z,1443533252.915 [ComponentRegistry](DEBUG): SyncComponent "StratificationFrontDetector" handled in the control thread.
2015-09-29T13:27:32.915Z,1443533252.915 [Module Loader](DEBUG): Loaded Module: Estimation (Contains the base estimation components)
2015-09-29T13:27:32.916Z,1443533252.916 [Module Loader](DEBUG): Loading Module at Modules/Guidance.so
2015-09-29T13:27:33.220Z,1443533253.220 [Module Loader](DEBUG): Loaded Module: Guidance (Contains behaviors and commands)
2015-09-29T13:27:33.220Z,1443533253.220 [Module Loader](DEBUG): Loading Module at Modules/Navigation.so
2015-09-29T13:27:33.356Z,1443533253.356 [DeadReckonUsingMultipleVelocitySources] Loaded
2015-09-29T13:27:33.357Z,1443533253.357 [ComponentRegistry](DEBUG): SyncComponent "DeadReckonUsingMultipleVelocitySources" handled in the control thread.
2015-09-29T13:27:33.419Z,1443533253.419 [DeadReckonUsingSpeedCalculator] Loaded
2015-09-29T13:27:33.420Z,1443533253.420 [ComponentRegistry](DEBUG): SyncComponent "DeadReckonUsingSpeedCalculator" handled in the control thread.
2015-09-29T13:27:33.442Z,1443533253.442 [NavChart] Loaded
2015-09-29T13:27:33.442Z,1443533253.442 [ComponentRegistry](DEBUG): SyncComponent "NavChart" handled in the control thread.
2015-09-29T13:27:33.448Z,1443533253.448 [UniversalFixResidualReporter] Loaded
2015-09-29T13:27:33.448Z,1443533253.448 [ComponentRegistry](DEBUG): SyncComponent "UniversalFixResidualReporter" handled in the control thread.
2015-09-29T13:27:33.449Z,1443533253.449 [Module Loader](DEBUG): Loaded Module: Navigation (Contains the base navigation components)
2015-09-29T13:27:33.449Z,1443533253.449 [Module Loader](DEBUG): Loading Module at Modules/Sample.so
2015-09-29T13:27:33.458Z,1443533253.458 [Module Loader](DEBUG): Loaded Module: Sample (This is a Sample Module of Sample Components)
2015-09-29T13:27:33.459Z,1443533253.459 [Module Loader](DEBUG): Loading Module at Modules/Science.so
2015-09-29T13:27:33.770Z,1443533253.770 [CTD_NeilBrown] Loaded
2015-09-29T13:27:33.770Z,1443533253.770 [ComponentRegistry](DEBUG): Component "CTD_NeilBrown" handled in its own thread.
2015-09-29T13:27:33.774Z,1443533253.774 [CTD_NeilBrown ThreadHandler](DEBUG): Created PCaller Thread at 4059D4E0
2015-09-29T13:27:33.774Z,1443533253.774 [CTD_NeilBrown ThreadHandler](INFO): Protected caller Thread ID is 811
2015-09-29T13:27:33.788Z,1443533253.788 [ISUS] Loaded
2015-09-29T13:27:33.788Z,1443533253.788 [ComponentRegistry](DEBUG): SyncComponent "ISUS" handled in the control thread.
2015-09-29T13:27:33.807Z,1443533253.807 [PAR_Licor] Loaded
2015-09-29T13:27:33.808Z,1443533253.808 [ComponentRegistry](DEBUG): SyncComponent "PAR_Licor" handled in the control thread.
2015-09-29T13:27:33.865Z,1443533253.865 [WetLabsBB2FL] Loaded
2015-09-29T13:27:33.866Z,1443533253.866 [ComponentRegistry](DEBUG): Component "WetLabsBB2FL" handled in its own thread.
2015-09-29T13:27:33.870Z,1443533253.870 [WetLabsBB2FL ThreadHandler](DEBUG): Created PCaller Thread at 405CD4E0
2015-09-29T13:27:33.870Z,1443533253.870 [WetLabsBB2FL ThreadHandler](INFO): Protected caller Thread ID is 812
2015-09-29T13:27:33.871Z,1443533253.871 [Module Loader](DEBUG): Loaded Module: Science (Contains the science components)
2015-09-29T13:27:33.872Z,1443533253.872 [Module Loader](DEBUG): Loading Module at Modules/Sensor.so
2015-09-29T13:27:34.627Z,1443533254.627 [AHRS_sp3003D] Loaded
2015-09-29T13:27:34.627Z,1443533254.627 [ComponentRegistry](DEBUG): SyncComponent "AHRS_sp3003D" handled in the control thread.
2015-09-29T13:27:34.814Z,1443533254.814 [DataOverHttps] Loaded
2015-09-29T13:27:34.814Z,1443533254.814 [ComponentRegistry](DEBUG): SyncComponent "DataOverHttps" handled in the control thread.
2015-09-29T13:27:34.828Z,1443533254.828 [Depth_Keller] Loaded
2015-09-29T13:27:34.828Z,1443533254.828 [ComponentRegistry](DEBUG): SyncComponent "Depth_Keller" handled in the control thread.
2015-09-29T13:27:34.834Z,1443533254.834 [DropWeight] Loaded
2015-09-29T13:27:34.834Z,1443533254.834 [ComponentRegistry](DEBUG): SyncComponent "DropWeight" handled in the control thread.
2015-09-29T13:27:34.995Z,1443533254.995 [DVL_micro] Loaded
2015-09-29T13:27:34.995Z,1443533254.995 [ComponentRegistry](DEBUG): SyncComponent "DVL_micro" handled in the control thread.
2015-09-29T13:27:35.107Z,1443533255.107 [NAL9602] Loaded
2015-09-29T13:27:35.107Z,1443533255.107 [ComponentRegistry](DEBUG): SyncComponent "NAL9602" handled in the control thread.
2015-09-29T13:27:35.156Z,1443533255.156 [Onboard] Loaded
2015-09-29T13:27:35.156Z,1443533255.156 [ComponentRegistry](DEBUG): SyncComponent "Onboard" handled in the control thread.
2015-09-29T13:27:35.169Z,1443533255.169 [Radio_Surface] Loaded
2015-09-29T13:27:35.169Z,1443533255.169 [ComponentRegistry](DEBUG): Component "Radio_Surface" handled in its own thread.
2015-09-29T13:27:35.174Z,1443533255.174 [Radio_Surface ThreadHandler](DEBUG): Created PCaller Thread at 408114E0
2015-09-29T13:27:35.174Z,1443533255.174 [Radio_Surface ThreadHandler](INFO): Protected caller Thread ID is 813
2015-09-29T13:27:35.339Z,1443533255.339 [DAT] Loaded
2015-09-29T13:27:35.339Z,1443533255.339 [ComponentRegistry](DEBUG): SyncComponent "DAT" handled in the control thread.
2015-09-29T13:27:35.346Z,1443533255.346 [SCPI] Loaded
2015-09-29T13:27:35.346Z,1443533255.346 [ComponentRegistry](DEBUG): SyncComponent "SCPI" handled in the control thread.
2015-09-29T13:27:35.347Z,1443533255.347 [Module Loader](DEBUG): Loaded Module: Sensor (Contains the sensor components)
2015-09-29T13:27:35.348Z,1443533255.348 [Module Loader](DEBUG): Loading Module at Modules/Servo.so
2015-09-29T13:27:35.489Z,1443533255.489 [BuoyancyServo] Loaded
2015-09-29T13:27:35.489Z,1443533255.489 [ComponentRegistry](DEBUG): SyncComponent "BuoyancyServo" handled in the control thread.
2015-09-29T13:27:35.503Z,1443533255.503 [ElevatorServo] Loaded
2015-09-29T13:27:35.503Z,1443533255.503 [ComponentRegistry](DEBUG): SyncComponent "ElevatorServo" handled in the control thread.
2015-09-29T13:27:35.515Z,1443533255.515 [MassServo] Loaded
2015-09-29T13:27:35.515Z,1443533255.515 [ComponentRegistry](DEBUG): SyncComponent "MassServo" handled in the control thread.
2015-09-29T13:27:35.532Z,1443533255.532 [RudderServo] Loaded
2015-09-29T13:27:35.532Z,1443533255.532 [ComponentRegistry](DEBUG): SyncComponent "RudderServo" handled in the control thread.
2015-09-29T13:27:35.544Z,1443533255.544 [ThrusterServo] Loaded
2015-09-29T13:27:35.544Z,1443533255.544 [ComponentRegistry](DEBUG): SyncComponent "ThrusterServo" handled in the control thread.
2015-09-29T13:27:35.545Z,1443533255.545 [Module Loader](DEBUG): Loaded Module: Servo (This is the module containing motor controllers)
2015-09-29T13:27:35.545Z,1443533255.545 [Module Loader](DEBUG): Loading Module at Modules/Simulator.so
2015-09-29T13:27:35.737Z,1443533255.737 [InternalSim] Loaded
2015-09-29T13:27:35.737Z,1443533255.737 [ComponentRegistry](DEBUG): SyncComponent "InternalSim" handled in the control thread.
2015-09-29T13:27:35.738Z,1443533255.738 [Module Loader](DEBUG): Loaded Module: Simulator (This is the module containing the Simulator)
2015-09-29T13:27:35.739Z,1443533255.739 [Module Loader](DEBUG): Loading Module at Modules/Trigger.so
2015-09-29T13:27:35.779Z,1443533255.779 [Module Loader](DEBUG): Loaded Module: Trigger (Contains triggers for use in missions)
2015-09-29T13:27:35.783Z,1443533255.783 [ComponentRegistry](DEBUG): SyncComponent "MissionManager" handled in the control thread.
2015-09-29T13:27:35.784Z,1443533255.784 [ComponentRegistry](DEBUG): SyncComponent "Reporter" handled in the control thread.
2015-09-29T13:27:35.791Z,1443533255.791 [ComponentRegistry](DEBUG): Component "NavChartDb" handled in its own thread.
2015-09-29T13:27:35.792Z,1443533255.792 [NavChartDb ThreadHandler](DEBUG): Created PCaller Thread at 408BF4E0
2015-09-29T13:27:35.792Z,1443533255.792 [NavChartDb ThreadHandler](INFO): Protected caller Thread ID is 814
2015-09-29T13:27:35.797Z,1443533255.797 [Supervisor](INFO): Main Thread ID is 761
2015-09-29T13:27:35.797Z,1443533255.797 [Supervisor](DEBUG): Running supervisor.
2015-09-29T13:27:35.798Z,1443533255.798 [CommandLine ThreadHandler](INFO): Handler Thread ID is 815
2015-09-29T13:27:35.801Z,1443533255.801 [controlThread ThreadHandler](INFO): Handler Thread ID is 816
2015-09-29T13:27:35.801Z,1443533255.801 [controlThread](DEBUG): Initializing ControlThread
2015-09-29T13:27:35.802Z,1443533255.802 [VerticalControl](DEBUG): Initialize VerticalControlComponent.
2015-09-29T13:27:35.804Z,1443533255.804 [HorizontalControl](DEBUG): Initialize HorizontalControlComponent.
2015-09-29T13:27:35.805Z,1443533255.805 [SpeedControl](DEBUG): Initialize SpeedControlComponent.
2015-09-29T13:27:35.806Z,1443533255.806 [LoopControl](DEBUG): Initialize LoopControlComponent.
2015-09-29T13:27:35.806Z,1443533255.806 [SBIT](INFO): Initialize SBIT Component.
2015-09-29T13:27:35.806Z,1443533255.806 [SBIT](IMPORTANT): Tethys CM Info: SVN revision:12634
2015-09-29T13:27:35.808Z,1443533255.808 [SBIT](INFO): Kernel Reporting Different Release From Configuration.
Kernel Expected: 2.6.32-45-generic-pae
Kernel Reported: 2.6.27.8
2015-09-29T13:27:35.808Z,1443533255.808 [SBIT](INFO): Kernel Reporting Different Version From Configuration.
Kernel Expected: #102-Ubuntu SMP Wed Jan 2 22:10:16 UTC 2013
Kernel Reported: #641 PREEMPT Mon Sep 28 16:45:10 PDT 2015
2015-09-29T13:27:35.809Z,1443533255.809 [SBIT](INFO): Beginning SBIT in 20.000000 seconds.
2015-09-29T13:27:35.810Z,1443533255.810 [IBIT](INFO): Initialize IBIT Component.
2015-09-29T13:27:35.811Z,1443533255.811 [CBIT](DEBUG): Initialize CBIT Component.
2015-09-29T13:27:35.811Z,1443533255.811 [CBIT](FAULT): LAST RESTART WAS UNINTENTIONAL.
2015-09-29T13:27:35.811Z,1443533255.811 [CBIT](INFO): Last reboot was NOT due to watchdog timer.
2015-09-29T13:27:35.811Z,1443533255.811 [DepthRateCalculator](DEBUG): Initializing DepthRateCalculator.
2015-09-29T13:27:35.812Z,1443533255.812 [PitchRateCalculator](DEBUG): Initializing PitchRateCalculator.
2015-09-29T13:27:35.812Z,1443533255.812 [SpeedCalculator](DEBUG): Initializing SpeedCalculator.
2015-09-29T13:27:35.813Z,1443533255.813 [TempGradientCalculator](DEBUG): Initializing TempGradientCalculator.
2015-09-29T13:27:35.813Z,1443533255.813 [VerticalTemperatureHomogeneityIndexCalculator](DEBUG): (re)initializing
2015-09-29T13:27:35.814Z,1443533255.814 [YawRateCalculator](DEBUG): Initializing YawRateCalculator.
2015-09-29T13:27:35.814Z,1443533255.814 [DeadReckonUsingMultipleVelocitySources](DEBUG): Initializing DeadReckonUsingMultipleVelocitySources component.
2015-09-29T13:27:35.815Z,1443533255.815 [DeadReckonUsingMultipleVelocitySources](INFO): Will consider orientation measurement stale after 120s.
2015-09-29T13:27:35.815Z,1443533255.815 [DeadReckonUsingMultipleVelocitySources](INFO): Will consider velocity measurement stale after 20s.
2015-09-29T13:27:35.816Z,1443533255.816 [DeadReckonUsingSpeedCalculator](DEBUG): Initializing DeadReckonUsingSpeedCalculator component.
2015-09-29T13:27:35.816Z,1443533255.816 [DeadReckonUsingSpeedCalculator](INFO): Will consider orientation measurement stale after 120s.
2015-09-29T13:27:35.817Z,1443533255.817 [DeadReckonUsingSpeedCalculator](INFO): Will consider velocity measurement stale after 20s.
2015-09-29T13:27:35.817Z,1443533255.817 [NavChart](DEBUG): Initialize NavChart Navigation.
2015-09-29T13:27:35.817Z,1443533255.817 [UniversalFixResidualReporter](DEBUG): Initializing UniversalFixResidualReporter component.
2015-09-29T13:27:35.823Z,1443533255.823 [InternalSim](DEBUG):  InternalSim initializing...
2015-09-29T13:27:35.850Z,1443533255.850 [logger ThreadHandler](INFO): Handler Thread ID is 817
2015-09-29T13:27:35.934Z,1443533255.934 [CTD_NeilBrown ThreadHandler](INFO): Handler Thread ID is 818
2015-09-29T13:27:35.943Z,1443533255.943 [WetLabsBB2FL ThreadHandler](INFO): Handler Thread ID is 819
2015-09-29T13:27:35.982Z,1443533255.982 [Radio_Surface ThreadHandler](INFO): Handler Thread ID is 820
2015-09-29T13:27:35.993Z,1443533255.993 [MissionManager](INFO): Loading Mission: Missions/Startup.xml
2015-09-29T13:27:36.016Z,1443533256.016 [NavChartDb ThreadHandler](INFO): Handler Thread ID is 821
2015-09-29T13:27:36.024Z,1443533256.024 [NavChartDb](INFO): Looking for Electronic Nav Chart files in directory: Resources
2015-09-29T13:27:36.027Z,1443533256.027 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US1WC07M.000
2015-09-29T13:27:36.027Z,1443533256.027 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US2WC11M.000
2015-09-29T13:27:36.027Z,1443533256.027 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US3CA52M.000
2015-09-29T13:27:36.027Z,1443533256.027 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US4CA60M.000
2015-09-29T13:27:36.028Z,1443533256.028 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA50M.000
2015-09-29T13:27:36.028Z,1443533256.028 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA61M.000
2015-09-29T13:27:36.028Z,1443533256.028 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA62M.000
2015-09-29T13:27:36.028Z,1443533256.028 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA83M.000
2015-09-29T13:27:36.074Z,1443533256.074 [Startup:A.GoToSurface](DEBUG): Construct GoToSurface.
2015-09-29T13:27:36.116Z,1443533256.116 [MissionManager](DEBUG): 
<?xml version="1.0" encoding="UTF-8"?>
<Mission xmlns="Tethys"
       xmlns:Control="Tethys/Control"
       xmlns:Guidance="Tethys/Guidance" 
       xmlns:Units="Tethys/Units"
       xmlns:Universal="Tethys/Universal"
       xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
       xsi:schemaLocation="Tethys http://okeanids.mbari.org/tethys/Xml/Tethys.xsd
                           Tethys/Control http://okeanids.mbari.org/tethys/Xml/Control.xsd
                           Tethys/Guidance http://okeanids.mbari.org/tethys/Xml/Guidance.xsd
                           Tethys/Units http://okeanids.mbari.org/tethys/Xml/Units.xsd
                           Tethys/Universal http://okeanids.mbari.org/tethys/Xml/Universal.xsd"
       Id="Startup">

    <Guidance:GoToSurface>
        <Progression/>
    </Guidance:GoToSurface>

    <Aggregate Id="StartupSatComms">

        <Sequence/>

        <ReadDatum>
            <Timeout Duration="P1M" />
            <Universal:latitude_fix/>
        </ReadDatum>

        <ReadDatum>
            <Timeout Duration="P1M" />
            <Universal:platform_communications/>
        </ReadDatum>

    </Aggregate>

</Mission>


2015-09-29T13:27:36.117Z,1443533256.117 [MissionManager](INFO): Loading Mission: Missions/Default.xml
2015-09-29T13:27:36.176Z,1443533256.176 [MissionManager](INFO): DefineArg Default.ElapsedSinceDefaultStarted = 0.000000 min
2015-09-29T13:27:36.177Z,1443533256.177 [Default:A.GoToSurface](DEBUG): Construct GoToSurface.
2015-09-29T13:27:36.223Z,1443533256.223 [Default:CheckIn:Read_Iridium:A_Timeout:A.Execute](DEBUG): Construct Execute.
2015-09-29T13:27:36.226Z,1443533256.226 [Default:CheckIn:C.Wait](DEBUG): Construct Wait.
2015-09-29T13:27:36.260Z,1443533256.260 [Default:D.Execute](DEBUG): Construct Execute.
2015-09-29T13:27:36.263Z,1443533256.263 [MissionManager](DEBUG): 
<?xml version="1.0" encoding="UTF-8"?>
<Mission xmlns="Tethys"
xmlns:Guidance="Tethys/Guidance"
xmlns:Units="Tethys/Units"
xmlns:Universal="Tethys/Universal"
xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
xsi:schemaLocation="Tethys http://okeanids.mbari.org/tethys/Xml/Tethys.xsd
Tethys/Guidance http://okeanids.mbari.org/tethys/Xml/Guidance.xsd
Tethys/Units http://okeanids.mbari.org/tethys/Xml/Units.xsd
Tethys/Universal http://okeanids.mbari.org/tethys/Xml/Universal.xsd"
Id="Default">

    <DefineArg Name="ElapsedSinceDefaultStarted"><Units:minute/><Value>0</Value></DefineArg>

    <Guidance:GoToSurface>
        <Progression/>
    </Guidance:GoToSurface>

    <Aggregate Id="CheckIn">

        <Sequence Repeat="288"/>

        <ReadDatum Id="Read_GPS">
            <Sequence/>
            <Timeout Duration="P5M"/>
            <Universal:time_fix/>
        </ReadDatum>

        <ReadDatum Id="Read_Iridium">
            <Sequence/>
            <Timeout Duration="P2H">
                <Guidance:Execute>
                    <Sequence/>
                    <Setting><Guidance:Execute.command/><String>Burn 300</String></Setting>
                </Guidance:Execute>
                <Syslog Severity="Critical">Dropped weight due to communications timeout.</Syslog>
            </Timeout>
            <Universal:platform_communications/>
        </ReadDatum>

        <Guidance:Wait>
            <Sequence/>
            <Setting><Guidance:Wait.duration/><Units:minute/><Value>5</Value></Setting>
        </Guidance:Wait>

        <Assign><Sequence/><Arg Name="ElapsedSinceDefaultStarted"/><Elapsed><Universal:mission_started/></Elapsed></Assign>

        <Syslog Severity="Important">Default mission has been running for <Arg Name="ElapsedSinceDefaultStarted"/><Units:minute/></Syslog>

    </Aggregate>

    <Syslog Severity="Important">Restarting logs and Default mission.</Syslog>

    <Guidance:Execute>
        <Sequence/>
        <Setting><Guidance:Execute.command/><String>restart logs</String></Setting>
    </Guidance:Execute>

</Mission>


2015-09-29T13:27:36.279Z,1443533256.279 [controlThread](DEBUG): Component order: CycleStarter,InternalSim,ISUS,PAR_Licor,AHRS_sp3003D,DataOverHttps,Depth_Keller,DropWeight,DVL_micro,NAL9602,Onboard,DAT,SCPI,PAR_Licor,Depth_Keller,DepthRateCalculator,PitchRateCalculator,SpeedCalculator,TempGradientCalculator,VerticalTemperatureHomogeneityIndexCalculator,YawRateCalculator,StratificationFrontDetector,DeadReckonUsingMultipleVelocitySources,DeadReckonUsingSpeedCalculator,NavChart,UniversalFixResidualReporter,MissionManager,VerticalControl,HorizontalControl,SpeedControl,LoopControl,BuoyancyServo,ElevatorServo,MassServo,RudderServo,ThrusterServo,SBIT,IBIT,CBIT,Reporter,LogSplitter,
2015-09-29T13:27:36.518Z,1443533256.518 [DVL_micro](INFO): Initializing
2015-09-29T13:27:36.675Z,1443533256.675 [DeadReckonUsingMultipleVelocitySources](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T13:27:36.694Z,1443533256.694 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T13:27:36.810Z,1443533256.810 [BuoyancyServo](DEBUG): Initializing BuoyancyServo.
2015-09-29T13:27:36.818Z,1443533256.818 [ElevatorServo](DEBUG): Initializing ElevatorServo.
2015-09-29T13:27:36.838Z,1443533256.838 [MassServo](DEBUG): Initializing MassServo.
2015-09-29T13:27:36.844Z,1443533256.844 [RudderServo](DEBUG): Initializing RudderServo.
2015-09-29T13:27:36.862Z,1443533256.862 [ThrusterServo](DEBUG): Initializing ThrusterServo.
2015-09-29T13:27:37.100Z,1443533257.100 [DeadReckonUsingMultipleVelocitySources](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T13:27:37.101Z,1443533257.101 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T13:27:45.873Z,1443533265.873 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T13:27:46.209Z,1443533266.209 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T13:27:46.353Z,1443533266.353 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T13:27:46.753Z,1443533266.753 [DataOverHttps](INFO): setting available, lastComms_.elapsed()=0.003000
2015-09-29T13:27:46.757Z,1443533266.757 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T13:27:47.151Z,1443533267.151 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T13:27:47.551Z,1443533267.551 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T13:27:47.951Z,1443533267.951 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T13:27:48.352Z,1443533268.352 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T13:27:48.752Z,1443533268.752 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T13:27:49.151Z,1443533269.151 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T13:27:49.550Z,1443533269.550 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T13:27:49.951Z,1443533269.951 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T13:27:50.351Z,1443533270.351 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T13:27:50.752Z,1443533270.752 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T13:27:51.151Z,1443533271.151 [NAL9602](INFO): No messages in MT queue
2015-09-29T13:27:51.152Z,1443533271.152 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T13:27:51.551Z,1443533271.551 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T13:27:51.951Z,1443533271.951 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T13:27:52.350Z,1443533272.350 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T13:27:52.750Z,1443533272.750 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T13:27:53.150Z,1443533273.150 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T13:27:53.552Z,1443533273.552 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T13:27:53.951Z,1443533273.951 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T13:27:54.351Z,1443533274.351 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T13:27:54.750Z,1443533274.750 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T13:27:55.151Z,1443533275.151 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T13:27:55.551Z,1443533275.551 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T13:27:55.950Z,1443533275.950 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T13:27:56.351Z,1443533276.351 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T13:27:56.366Z,1443533276.366 [SBIT](IMPORTANT): Beginning Startup BIT
2015-09-29T13:27:56.751Z,1443533276.751 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T13:27:57.150Z,1443533277.150 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T13:27:57.551Z,1443533277.551 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T13:27:57.951Z,1443533277.951 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T13:27:58.351Z,1443533278.351 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T13:27:58.752Z,1443533278.752 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T13:27:59.151Z,1443533279.151 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T13:27:59.551Z,1443533279.551 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T13:27:59.951Z,1443533279.951 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T13:28:00.351Z,1443533280.351 [D