2015-09-29T12:32:11.137Z,1443529931.137 [Supervisor](DEBUG): Initializing supervisor.
2015-09-29T12:32:11.140Z,1443529931.140 [SyncHandler](DEBUG): Created PCaller Thread at 4034C4E0
2015-09-29T12:32:11.141Z,1443529931.141 [SyncHandler](INFO): Protected caller Thread ID is 761
2015-09-29T12:32:11.141Z,1443529931.141 [ComponentRegistry](DEBUG): Component "controlThread" handled in its own thread.
2015-09-29T12:32:11.145Z,1443529931.145 [controlThread ThreadHandler](DEBUG): Created PCaller Thread at 4037C4E0
2015-09-29T12:32:11.146Z,1443529931.146 [controlThread ThreadHandler](INFO): Protected caller Thread ID is 762
2015-09-29T12:32:11.148Z,1443529931.148 [ComponentRegistry](DEBUG): SyncComponent "CycleStarter" handled in the control thread.
2015-09-29T12:32:11.161Z,1443529931.161 [ComponentRegistry](DEBUG): Component "CommandLine" handled in its own thread.
2015-09-29T12:32:11.165Z,1443529931.165 [CommandLine ThreadHandler](DEBUG): Created PCaller Thread at 403AC4E0
2015-09-29T12:32:11.166Z,1443529931.166 [CommandLine ThreadHandler](INFO): Protected caller Thread ID is 763
2015-09-29T12:32:11.166Z,1443529931.166 [ComponentRegistry](DEBUG): Component "logger" handled in its own thread.
2015-09-29T12:32:11.169Z,1443529931.169 [logger ThreadHandler](DEBUG): Created PCaller Thread at 403DC4E0
2015-09-29T12:32:11.170Z,1443529931.170 [logger ThreadHandler](INFO): Protected caller Thread ID is 764
2015-09-29T12:32:11.172Z,1443529931.172 [ComponentRegistry](DEBUG): SyncComponent "LogSplitter" handled in the control thread.
2015-09-29T12:32:11.172Z,1443529931.172 [Supervisor](INFO): Looking for Config files in directory: Config/
2015-09-29T12:32:11.176Z,1443529931.176 [Supervisor](INFO): Opening Config file at: Config/Control.cfg
2015-09-29T12:32:11.570Z,1443529931.570 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Control
2015-09-29T12:32:11.572Z,1443529931.572 [Supervisor](INFO): Opening Config file at: Config/BIT.cfg
2015-09-29T12:32:11.765Z,1443529931.765 [ComponentRegistry](DEBUG): Loaded Config Component "Config/BIT
2015-09-29T12:32:11.766Z,1443529931.766 [Supervisor](INFO): Opening Config file at: Config/Derivation.cfg
2015-09-29T12:32:11.910Z,1443529931.910 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Derivation
2015-09-29T12:32:11.911Z,1443529931.911 [Supervisor](INFO): Opening Config file at: Config/Estimation.cfg
2015-09-29T12:32:12.058Z,1443529932.058 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Estimation
2015-09-29T12:32:12.059Z,1443529932.059 [Supervisor](INFO): Opening Config file at: Config/Guidance.cfg
2015-09-29T12:32:12.153Z,1443529932.153 [Supervisor](INFO): Opening Config file at: Config/Navigation.cfg
2015-09-29T12:32:12.374Z,1443529932.374 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Navigation
2015-09-29T12:32:12.375Z,1443529932.375 [Supervisor](INFO): Opening Config file at: Config/Sample.cfg
2015-09-29T12:32:12.470Z,1443529932.470 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Sample
2015-09-29T12:32:12.470Z,1443529932.470 [Supervisor](INFO): Opening Config file at: Config/Science.cfg
2015-09-29T12:32:12.782Z,1443529932.782 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Science
2015-09-29T12:32:12.783Z,1443529932.783 [Supervisor](INFO): Opening Config file at: Config/Sensor.cfg
2015-09-29T12:32:13.182Z,1443529933.182 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Sensor
2015-09-29T12:32:13.183Z,1443529933.183 [Supervisor](INFO): Opening Config file at: Config/Servo.cfg
2015-09-29T12:32:13.534Z,1443529933.534 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Servo
2015-09-29T12:32:13.536Z,1443529933.536 [Supervisor](INFO): Opening Config file at: Config/Simulator.cfg
2015-09-29T12:32:14.131Z,1443529934.131 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Simulator
2015-09-29T12:32:14.131Z,1443529934.131 [Supervisor](INFO): Opening Config file at: Config/logger.cfg
2015-09-29T12:32:14.362Z,1443529934.362 [ComponentRegistry](DEBUG): Loaded Config Component "Config/logger
2015-09-29T12:32:14.363Z,1443529934.363 [Supervisor](INFO): Opening Config file at: Config/secure.cfg
2015-09-29T12:32:14.482Z,1443529934.482 [ComponentRegistry](DEBUG): Loaded Config Component "Config/secure
2015-09-29T12:32:14.482Z,1443529934.482 [Supervisor](INFO): Opening Config file at: Config/vehicle.cfg
2015-09-29T12:32:15.002Z,1443529935.002 [ComponentRegistry](DEBUG): Loaded Config Component "Config/vehicle
2015-09-29T12:32:15.003Z,1443529935.003 [Supervisor](INFO): Opening Config file at: Config/workSite.cfg
2015-09-29T12:32:15.169Z,1443529935.169 [ComponentRegistry](DEBUG): Loaded Config Component "Config/workSite
2015-09-29T12:32:15.171Z,1443529935.171 [Supervisor](INFO): Looking for Config files in directory: Config/(none)/
2015-09-29T12:32:15.171Z,1443529935.171 [Supervisor](FAULT): Ignoring configuration overrides from Data/persisted.cfg
2015-09-29T12:32:15.175Z,1443529935.175 [Module Loader](DEBUG): Loading Module at Modules/Control.so
2015-09-29T12:32:15.250Z,1443529935.250 [VerticalControl](DEBUG): Construct VerticalControl.
2015-09-29T12:32:15.385Z,1443529935.385 [VerticalControl] Loaded
2015-09-29T12:32:15.385Z,1443529935.385 [ComponentRegistry](DEBUG): SyncComponent "VerticalControl" handled in the control thread.
2015-09-29T12:32:15.386Z,1443529935.386 [HorizontalControl](DEBUG): Construct HorizontalControl.
2015-09-29T12:32:15.467Z,1443529935.467 [HorizontalControl] Loaded
2015-09-29T12:32:15.468Z,1443529935.468 [ComponentRegistry](DEBUG): SyncComponent "HorizontalControl" handled in the control thread.
2015-09-29T12:32:15.468Z,1443529935.468 [SpeedControl](DEBUG): Construct SpeedControl.
2015-09-29T12:32:15.474Z,1443529935.474 [SpeedControl] Loaded
2015-09-29T12:32:15.475Z,1443529935.475 [ComponentRegistry](DEBUG): SyncComponent "SpeedControl" handled in the control thread.
2015-09-29T12:32:15.475Z,1443529935.475 [LoopControl](DEBUG): Construct LoopControl.
2015-09-29T12:32:15.476Z,1443529935.476 [LoopControl] Loaded
2015-09-29T12:32:15.476Z,1443529935.476 [ComponentRegistry](DEBUG): SyncComponent "LoopControl" handled in the control thread.
2015-09-29T12:32:15.476Z,1443529935.476 [Module Loader](DEBUG): Loaded Module: Control (Contains the Control components, such as Depth, Heading, and Speed Control)
2015-09-29T12:32:15.481Z,1443529935.481 [Module Loader](DEBUG): Loading Module at Modules/BIT.so
2015-09-29T12:32:15.645Z,1443529935.645 [SBIT](DEBUG): Construct Startup Built In Test.
2015-09-29T12:32:15.657Z,1443529935.657 [SBIT] Loaded
2015-09-29T12:32:15.657Z,1443529935.657 [ComponentRegistry](DEBUG): SyncComponent "SBIT" handled in the control thread.
2015-09-29T12:32:15.658Z,1443529935.658 [IBIT](DEBUG): Construct Initiated Built In Test.
2015-09-29T12:32:15.692Z,1443529935.692 [IBIT] Loaded
2015-09-29T12:32:15.693Z,1443529935.693 [ComponentRegistry](DEBUG): SyncComponent "IBIT" handled in the control thread.
2015-09-29T12:32:15.695Z,1443529935.695 [CBIT](DEBUG): Construct Continuous Built In Test.
2015-09-29T12:32:15.850Z,1443529935.850 [CBIT] Loaded
2015-09-29T12:32:15.851Z,1443529935.851 [ComponentRegistry](DEBUG): SyncComponent "CBIT" handled in the control thread.
2015-09-29T12:32:15.851Z,1443529935.851 [Module Loader](DEBUG): Loaded Module: BIT (Contains the BuiltInTest components, such as C Built In Test)
2015-09-29T12:32:15.852Z,1443529935.852 [Module Loader](DEBUG): Loading Module at Modules/Derivation.so
2015-09-29T12:32:15.894Z,1443529935.894 [DepthRateCalculator] Loaded
2015-09-29T12:32:15.894Z,1443529935.894 [ComponentRegistry](DEBUG): SyncComponent "DepthRateCalculator" handled in the control thread.
2015-09-29T12:32:15.899Z,1443529935.899 [PitchRateCalculator] Loaded
2015-09-29T12:32:15.900Z,1443529935.900 [ComponentRegistry](DEBUG): SyncComponent "PitchRateCalculator" handled in the control thread.
2015-09-29T12:32:15.915Z,1443529935.915 [SpeedCalculator] Loaded
2015-09-29T12:32:15.916Z,1443529935.916 [ComponentRegistry](DEBUG): SyncComponent "SpeedCalculator" handled in the control thread.
2015-09-29T12:32:15.933Z,1443529935.933 [TempGradientCalculator] Loaded
2015-09-29T12:32:15.933Z,1443529935.933 [ComponentRegistry](DEBUG): SyncComponent "TempGradientCalculator" handled in the control thread.
2015-09-29T12:32:15.955Z,1443529935.955 [VerticalTemperatureHomogeneityIndexCalculator] Loaded
2015-09-29T12:32:15.955Z,1443529935.955 [ComponentRegistry](DEBUG): SyncComponent "VerticalTemperatureHomogeneityIndexCalculator" handled in the control thread.
2015-09-29T12:32:15.960Z,1443529935.960 [YawRateCalculator] Loaded
2015-09-29T12:32:15.961Z,1443529935.961 [ComponentRegistry](DEBUG): SyncComponent "YawRateCalculator" handled in the control thread.
2015-09-29T12:32:15.961Z,1443529935.961 [Module Loader](DEBUG): Loaded Module: Derivation (Contains the base derivation components)
2015-09-29T12:32:15.962Z,1443529935.962 [Module Loader](DEBUG): Loading Module at Modules/Estimation.so
2015-09-29T12:32:16.083Z,1443529936.083 [StratificationFrontDetector](INFO): threshold set to: 0.399988 degC
2015-09-29T12:32:16.083Z,1443529936.083 [StratificationFrontDetector](DEBUG): (re)initializing
2015-09-29T12:32:16.083Z,1443529936.083 [StratificationFrontDetector] Loaded
2015-09-29T12:32:16.083Z,1443529936.083 [ComponentRegistry](DEBUG): SyncComponent "StratificationFrontDetector" handled in the control thread.
2015-09-29T12:32:16.084Z,1443529936.084 [Module Loader](DEBUG): Loaded Module: Estimation (Contains the base estimation components)
2015-09-29T12:32:16.085Z,1443529936.085 [Module Loader](DEBUG): Loading Module at Modules/Guidance.so
2015-09-29T12:32:16.378Z,1443529936.378 [Module Loader](DEBUG): Loaded Module: Guidance (Contains behaviors and commands)
2015-09-29T12:32:16.379Z,1443529936.379 [Module Loader](DEBUG): Loading Module at Modules/Navigation.so
2015-09-29T12:32:16.513Z,1443529936.513 [DeadReckonUsingMultipleVelocitySources] Loaded
2015-09-29T12:32:16.513Z,1443529936.513 [ComponentRegistry](DEBUG): SyncComponent "DeadReckonUsingMultipleVelocitySources" handled in the control thread.
2015-09-29T12:32:16.574Z,1443529936.574 [DeadReckonUsingSpeedCalculator] Loaded
2015-09-29T12:32:16.574Z,1443529936.574 [ComponentRegistry](DEBUG): SyncComponent "DeadReckonUsingSpeedCalculator" handled in the control thread.
2015-09-29T12:32:16.592Z,1443529936.592 [NavChart] Loaded
2015-09-29T12:32:16.592Z,1443529936.592 [ComponentRegistry](DEBUG): SyncComponent "NavChart" handled in the control thread.
2015-09-29T12:32:16.602Z,1443529936.602 [UniversalFixResidualReporter] Loaded
2015-09-29T12:32:16.602Z,1443529936.602 [ComponentRegistry](DEBUG): SyncComponent "UniversalFixResidualReporter" handled in the control thread.
2015-09-29T12:32:16.603Z,1443529936.603 [Module Loader](DEBUG): Loaded Module: Navigation (Contains the base navigation components)
2015-09-29T12:32:16.603Z,1443529936.603 [Module Loader](DEBUG): Loading Module at Modules/Sample.so
2015-09-29T12:32:16.612Z,1443529936.612 [Module Loader](DEBUG): Loaded Module: Sample (This is a Sample Module of Sample Components)
2015-09-29T12:32:16.612Z,1443529936.612 [Module Loader](DEBUG): Loading Module at Modules/Science.so
2015-09-29T12:32:16.911Z,1443529936.911 [CTD_NeilBrown] Loaded
2015-09-29T12:32:16.911Z,1443529936.911 [ComponentRegistry](DEBUG): Component "CTD_NeilBrown" handled in its own thread.
2015-09-29T12:32:16.914Z,1443529936.914 [CTD_NeilBrown ThreadHandler](DEBUG): Created PCaller Thread at 4059D4E0
2015-09-29T12:32:16.914Z,1443529936.914 [CTD_NeilBrown ThreadHandler](INFO): Protected caller Thread ID is 810
2015-09-29T12:32:16.927Z,1443529936.927 [ISUS] Loaded
2015-09-29T12:32:16.927Z,1443529936.927 [ComponentRegistry](DEBUG): SyncComponent "ISUS" handled in the control thread.
2015-09-29T12:32:16.942Z,1443529936.942 [PAR_Licor] Loaded
2015-09-29T12:32:16.942Z,1443529936.942 [ComponentRegistry](DEBUG): SyncComponent "PAR_Licor" handled in the control thread.
2015-09-29T12:32:16.998Z,1443529936.998 [WetLabsBB2FL] Loaded
2015-09-29T12:32:16.999Z,1443529936.999 [ComponentRegistry](DEBUG): Component "WetLabsBB2FL" handled in its own thread.
2015-09-29T12:32:17.001Z,1443529937.001 [WetLabsBB2FL ThreadHandler](DEBUG): Created PCaller Thread at 405CD4E0
2015-09-29T12:32:17.002Z,1443529937.002 [WetLabsBB2FL ThreadHandler](INFO): Protected caller Thread ID is 811
2015-09-29T12:32:17.002Z,1443529937.002 [Module Loader](DEBUG): Loaded Module: Science (Contains the science components)
2015-09-29T12:32:17.003Z,1443529937.003 [Module Loader](DEBUG): Loading Module at Modules/Sensor.so
2015-09-29T12:32:17.728Z,1443529937.728 [AHRS_sp3003D] Loaded
2015-09-29T12:32:17.728Z,1443529937.728 [ComponentRegistry](DEBUG): SyncComponent "AHRS_sp3003D" handled in the control thread.
2015-09-29T12:32:17.927Z,1443529937.927 [DataOverHttps] Loaded
2015-09-29T12:32:17.927Z,1443529937.927 [ComponentRegistry](DEBUG): SyncComponent "DataOverHttps" handled in the control thread.
2015-09-29T12:32:17.941Z,1443529937.941 [Depth_Keller] Loaded
2015-09-29T12:32:17.941Z,1443529937.941 [ComponentRegistry](DEBUG): SyncComponent "Depth_Keller" handled in the control thread.
2015-09-29T12:32:17.950Z,1443529937.950 [DropWeight] Loaded
2015-09-29T12:32:17.950Z,1443529937.950 [ComponentRegistry](DEBUG): SyncComponent "DropWeight" handled in the control thread.
2015-09-29T12:32:18.108Z,1443529938.108 [DVL_micro] Loaded
2015-09-29T12:32:18.108Z,1443529938.108 [ComponentRegistry](DEBUG): SyncComponent "DVL_micro" handled in the control thread.
2015-09-29T12:32:18.213Z,1443529938.213 [NAL9602] Loaded
2015-09-29T12:32:18.213Z,1443529938.213 [ComponentRegistry](DEBUG): SyncComponent "NAL9602" handled in the control thread.
2015-09-29T12:32:18.260Z,1443529938.260 [Onboard] Loaded
2015-09-29T12:32:18.261Z,1443529938.261 [ComponentRegistry](DEBUG): SyncComponent "Onboard" handled in the control thread.
2015-09-29T12:32:18.277Z,1443529938.277 [Radio_Surface] Loaded
2015-09-29T12:32:18.277Z,1443529938.277 [ComponentRegistry](DEBUG): Component "Radio_Surface" handled in its own thread.
2015-09-29T12:32:18.281Z,1443529938.281 [Radio_Surface ThreadHandler](DEBUG): Created PCaller Thread at 408114E0
2015-09-29T12:32:18.282Z,1443529938.282 [Radio_Surface ThreadHandler](INFO): Protected caller Thread ID is 812
2015-09-29T12:32:18.442Z,1443529938.442 [DAT] Loaded
2015-09-29T12:32:18.442Z,1443529938.442 [ComponentRegistry](DEBUG): SyncComponent "DAT" handled in the control thread.
2015-09-29T12:32:18.449Z,1443529938.449 [SCPI] Loaded
2015-09-29T12:32:18.449Z,1443529938.449 [ComponentRegistry](DEBUG): SyncComponent "SCPI" handled in the control thread.
2015-09-29T12:32:18.450Z,1443529938.450 [Module Loader](DEBUG): Loaded Module: Sensor (Contains the sensor components)
2015-09-29T12:32:18.451Z,1443529938.451 [Module Loader](DEBUG): Loading Module at Modules/Servo.so
2015-09-29T12:32:18.586Z,1443529938.586 [BuoyancyServo] Loaded
2015-09-29T12:32:18.586Z,1443529938.586 [ComponentRegistry](DEBUG): SyncComponent "BuoyancyServo" handled in the control thread.
2015-09-29T12:32:18.599Z,1443529938.599 [ElevatorServo] Loaded
2015-09-29T12:32:18.599Z,1443529938.599 [ComponentRegistry](DEBUG): SyncComponent "ElevatorServo" handled in the control thread.
2015-09-29T12:32:18.611Z,1443529938.611 [MassServo] Loaded
2015-09-29T12:32:18.611Z,1443529938.611 [ComponentRegistry](DEBUG): SyncComponent "MassServo" handled in the control thread.
2015-09-29T12:32:18.623Z,1443529938.623 [RudderServo] Loaded
2015-09-29T12:32:18.624Z,1443529938.624 [ComponentRegistry](DEBUG): SyncComponent "RudderServo" handled in the control thread.
2015-09-29T12:32:18.639Z,1443529938.639 [ThrusterServo] Loaded
2015-09-29T12:32:18.640Z,1443529938.640 [ComponentRegistry](DEBUG): SyncComponent "ThrusterServo" handled in the control thread.
2015-09-29T12:32:18.640Z,1443529938.640 [Module Loader](DEBUG): Loaded Module: Servo (This is the module containing motor controllers)
2015-09-29T12:32:18.641Z,1443529938.641 [Module Loader](DEBUG): Loading Module at Modules/Simulator.so
2015-09-29T12:32:18.843Z,1443529938.843 [InternalSim] Loaded
2015-09-29T12:32:18.843Z,1443529938.843 [ComponentRegistry](DEBUG): SyncComponent "InternalSim" handled in the control thread.
2015-09-29T12:32:18.844Z,1443529938.844 [Module Loader](DEBUG): Loaded Module: Simulator (This is the module containing the Simulator)
2015-09-29T12:32:18.845Z,1443529938.845 [Module Loader](DEBUG): Loading Module at Modules/Trigger.so
2015-09-29T12:32:18.888Z,1443529938.888 [Module Loader](DEBUG): Loaded Module: Trigger (Contains triggers for use in missions)
2015-09-29T12:32:18.892Z,1443529938.892 [ComponentRegistry](DEBUG): SyncComponent "MissionManager" handled in the control thread.
2015-09-29T12:32:18.893Z,1443529938.893 [ComponentRegistry](DEBUG): SyncComponent "Reporter" handled in the control thread.
2015-09-29T12:32:18.900Z,1443529938.900 [ComponentRegistry](DEBUG): Component "NavChartDb" handled in its own thread.
2015-09-29T12:32:18.901Z,1443529938.901 [NavChartDb ThreadHandler](DEBUG): Created PCaller Thread at 408BF4E0
2015-09-29T12:32:18.902Z,1443529938.902 [NavChartDb ThreadHandler](INFO): Protected caller Thread ID is 813
2015-09-29T12:32:18.906Z,1443529938.906 [Supervisor](INFO): Main Thread ID is 760
2015-09-29T12:32:18.907Z,1443529938.907 [Supervisor](DEBUG): Running supervisor.
2015-09-29T12:32:18.907Z,1443529938.907 [CommandLine ThreadHandler](INFO): Handler Thread ID is 814
2015-09-29T12:32:18.914Z,1443529938.914 [controlThread ThreadHandler](INFO): Handler Thread ID is 815
2015-09-29T12:32:18.915Z,1443529938.915 [controlThread](DEBUG): Initializing ControlThread
2015-09-29T12:32:18.915Z,1443529938.915 [VerticalControl](DEBUG): Initialize VerticalControlComponent.
2015-09-29T12:32:18.917Z,1443529938.917 [HorizontalControl](DEBUG): Initialize HorizontalControlComponent.
2015-09-29T12:32:18.918Z,1443529938.918 [SpeedControl](DEBUG): Initialize SpeedControlComponent.
2015-09-29T12:32:18.919Z,1443529938.919 [LoopControl](DEBUG): Initialize LoopControlComponent.
2015-09-29T12:32:18.919Z,1443529938.919 [SBIT](INFO): Initialize SBIT Component.
2015-09-29T12:32:18.919Z,1443529938.919 [SBIT](IMPORTANT): Tethys CM Info: SVN revision:12634
2015-09-29T12:32:18.921Z,1443529938.921 [SBIT](INFO): Kernel Reporting Different Release From Configuration.
Kernel Expected: 2.6.32-45-generic-pae
Kernel Reported: 2.6.27.8
2015-09-29T12:32:18.921Z,1443529938.921 [SBIT](INFO): Kernel Reporting Different Version From Configuration.
Kernel Expected: #102-Ubuntu SMP Wed Jan 2 22:10:16 UTC 2013
Kernel Reported: #641 PREEMPT Mon Sep 28 16:45:10 PDT 2015
2015-09-29T12:32:18.922Z,1443529938.922 [SBIT](INFO): Beginning SBIT in 20.000000 seconds.
2015-09-29T12:32:18.923Z,1443529938.923 [IBIT](INFO): Initialize IBIT Component.
2015-09-29T12:32:18.924Z,1443529938.924 [CBIT](DEBUG): Initialize CBIT Component.
2015-09-29T12:32:18.924Z,1443529938.924 [CBIT](FAULT): LAST RESTART WAS UNINTENTIONAL.
2015-09-29T12:32:18.924Z,1443529938.924 [CBIT](INFO): Last reboot was NOT due to watchdog timer.
2015-09-29T12:32:18.924Z,1443529938.924 [DepthRateCalculator](DEBUG): Initializing DepthRateCalculator.
2015-09-29T12:32:18.925Z,1443529938.925 [PitchRateCalculator](DEBUG): Initializing PitchRateCalculator.
2015-09-29T12:32:18.925Z,1443529938.925 [SpeedCalculator](DEBUG): Initializing SpeedCalculator.
2015-09-29T12:32:18.925Z,1443529938.925 [TempGradientCalculator](DEBUG): Initializing TempGradientCalculator.
2015-09-29T12:32:18.926Z,1443529938.926 [VerticalTemperatureHomogeneityIndexCalculator](DEBUG): (re)initializing
2015-09-29T12:32:18.926Z,1443529938.926 [YawRateCalculator](DEBUG): Initializing YawRateCalculator.
2015-09-29T12:32:18.927Z,1443529938.927 [DeadReckonUsingMultipleVelocitySources](DEBUG): Initializing DeadReckonUsingMultipleVelocitySources component.
2015-09-29T12:32:18.928Z,1443529938.928 [DeadReckonUsingMultipleVelocitySources](INFO): Will consider orientation measurement stale after 120s.
2015-09-29T12:32:18.928Z,1443529938.928 [DeadReckonUsingMultipleVelocitySources](INFO): Will consider velocity measurement stale after 20s.
2015-09-29T12:32:18.928Z,1443529938.928 [DeadReckonUsingSpeedCalculator](DEBUG): Initializing DeadReckonUsingSpeedCalculator component.
2015-09-29T12:32:18.929Z,1443529938.929 [DeadReckonUsingSpeedCalculator](INFO): Will consider orientation measurement stale after 120s.
2015-09-29T12:32:18.929Z,1443529938.929 [DeadReckonUsingSpeedCalculator](INFO): Will consider velocity measurement stale after 20s.
2015-09-29T12:32:18.930Z,1443529938.930 [NavChart](DEBUG): Initialize NavChart Navigation.
2015-09-29T12:32:18.930Z,1443529938.930 [UniversalFixResidualReporter](DEBUG): Initializing UniversalFixResidualReporter component.
2015-09-29T12:32:18.935Z,1443529938.935 [InternalSim](DEBUG):  InternalSim initializing...
2015-09-29T12:32:18.958Z,1443529938.958 [logger ThreadHandler](INFO): Handler Thread ID is 816
2015-09-29T12:32:18.998Z,1443529938.998 [CTD_NeilBrown ThreadHandler](INFO): Handler Thread ID is 817
2015-09-29T12:32:19.066Z,1443529939.066 [WetLabsBB2FL ThreadHandler](INFO): Handler Thread ID is 818
2015-09-29T12:32:19.074Z,1443529939.074 [Radio_Surface ThreadHandler](INFO): Handler Thread ID is 819
2015-09-29T12:32:19.142Z,1443529939.142 [NavChartDb ThreadHandler](INFO): Handler Thread ID is 820
2015-09-29T12:32:19.150Z,1443529939.150 [NavChartDb](INFO): Looking for Electronic Nav Chart files in directory: Resources
2015-09-29T12:32:19.154Z,1443529939.154 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US1WC07M.000
2015-09-29T12:32:19.154Z,1443529939.154 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US2WC11M.000
2015-09-29T12:32:19.154Z,1443529939.154 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US3CA52M.000
2015-09-29T12:32:19.154Z,1443529939.154 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US4CA60M.000
2015-09-29T12:32:19.155Z,1443529939.155 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA50M.000
2015-09-29T12:32:19.155Z,1443529939.155 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA61M.000
2015-09-29T12:32:19.155Z,1443529939.155 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA62M.000
2015-09-29T12:32:19.155Z,1443529939.155 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA83M.000
2015-09-29T12:32:19.161Z,1443529939.161 [MissionManager](INFO): Loading Mission: Missions/Startup.xml
2015-09-29T12:32:19.192Z,1443529939.192 [Startup:A.GoToSurface](DEBUG): Construct GoToSurface.
2015-09-29T12:32:19.217Z,1443529939.217 [MissionManager](DEBUG): 
<?xml version="1.0" encoding="UTF-8"?>
<Mission xmlns="Tethys"
       xmlns:Control="Tethys/Control"
       xmlns:Guidance="Tethys/Guidance" 
       xmlns:Units="Tethys/Units"
       xmlns:Universal="Tethys/Universal"
       xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
       xsi:schemaLocation="Tethys http://okeanids.mbari.org/tethys/Xml/Tethys.xsd
                           Tethys/Control http://okeanids.mbari.org/tethys/Xml/Control.xsd
                           Tethys/Guidance http://okeanids.mbari.org/tethys/Xml/Guidance.xsd
                           Tethys/Units http://okeanids.mbari.org/tethys/Xml/Units.xsd
                           Tethys/Universal http://okeanids.mbari.org/tethys/Xml/Universal.xsd"
       Id="Startup">

    <Guidance:GoToSurface>
        <Progression/>
    </Guidance:GoToSurface>

    <Aggregate Id="StartupSatComms">

        <Sequence/>

        <ReadDatum>
            <Timeout Duration="P1M" />
            <Universal:latitude_fix/>
        </ReadDatum>

        <ReadDatum>
            <Timeout Duration="P1M" />
            <Universal:platform_communications/>
        </ReadDatum>

    </Aggregate>

</Mission>


2015-09-29T12:32:19.218Z,1443529939.218 [MissionManager](INFO): Loading Mission: Missions/Default.xml
2015-09-29T12:32:19.291Z,1443529939.291 [MissionManager](INFO): DefineArg Default.ElapsedSinceDefaultStarted = 0.000000 min
2015-09-29T12:32:19.292Z,1443529939.292 [Default:A.GoToSurface](DEBUG): Construct GoToSurface.
2015-09-29T12:32:19.331Z,1443529939.331 [Default:CheckIn:Read_Iridium:A_Timeout:A.Execute](DEBUG): Construct Execute.
2015-09-29T12:32:19.334Z,1443529939.334 [Default:CheckIn:C.Wait](DEBUG): Construct Wait.
2015-09-29T12:32:19.356Z,1443529939.356 [Default:D.Execute](DEBUG): Construct Execute.
2015-09-29T12:32:19.359Z,1443529939.359 [MissionManager](DEBUG): 
<?xml version="1.0" encoding="UTF-8"?>
<Mission xmlns="Tethys"
xmlns:Guidance="Tethys/Guidance"
xmlns:Units="Tethys/Units"
xmlns:Universal="Tethys/Universal"
xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
xsi:schemaLocation="Tethys http://okeanids.mbari.org/tethys/Xml/Tethys.xsd
Tethys/Guidance http://okeanids.mbari.org/tethys/Xml/Guidance.xsd
Tethys/Units http://okeanids.mbari.org/tethys/Xml/Units.xsd
Tethys/Universal http://okeanids.mbari.org/tethys/Xml/Universal.xsd"
Id="Default">

    <DefineArg Name="ElapsedSinceDefaultStarted"><Units:minute/><Value>0</Value></DefineArg>

    <Guidance:GoToSurface>
        <Progression/>
    </Guidance:GoToSurface>

    <Aggregate Id="CheckIn">

        <Sequence Repeat="288"/>

        <ReadDatum Id="Read_GPS">
            <Sequence/>
            <Timeout Duration="P5M"/>
            <Universal:time_fix/>
        </ReadDatum>

        <ReadDatum Id="Read_Iridium">
            <Sequence/>
            <Timeout Duration="P2H">
                <Guidance:Execute>
                    <Sequence/>
                    <Setting><Guidance:Execute.command/><String>Burn 300</String></Setting>
                </Guidance:Execute>
                <Syslog Severity="Critical">Dropped weight due to communications timeout.</Syslog>
            </Timeout>
            <Universal:platform_communications/>
        </ReadDatum>

        <Guidance:Wait>
            <Sequence/>
            <Setting><Guidance:Wait.duration/><Units:minute/><Value>5</Value></Setting>
        </Guidance:Wait>

        <Assign><Sequence/><Arg Name="ElapsedSinceDefaultStarted"/><Elapsed><Universal:mission_started/></Elapsed></Assign>

        <Syslog Severity="Important">Default mission has been running for <Arg Name="ElapsedSinceDefaultStarted"/><Units:minute/></Syslog>

    </Aggregate>

    <Syslog Severity="Important">Restarting logs and Default mission.</Syslog>

    <Guidance:Execute>
        <Sequence/>
        <Setting><Guidance:Execute.command/><String>restart logs</String></Setting>
    </Guidance:Execute>

</Mission>


2015-09-29T12:32:19.375Z,1443529939.375 [controlThread](DEBUG): Component order: CycleStarter,InternalSim,ISUS,PAR_Licor,AHRS_sp3003D,DataOverHttps,Depth_Keller,DropWeight,DVL_micro,NAL9602,Onboard,DAT,SCPI,PAR_Licor,Depth_Keller,DepthRateCalculator,PitchRateCalculator,SpeedCalculator,TempGradientCalculator,VerticalTemperatureHomogeneityIndexCalculator,YawRateCalculator,StratificationFrontDetector,DeadReckonUsingMultipleVelocitySources,DeadReckonUsingSpeedCalculator,NavChart,UniversalFixResidualReporter,MissionManager,VerticalControl,HorizontalControl,SpeedControl,LoopControl,BuoyancyServo,ElevatorServo,MassServo,RudderServo,ThrusterServo,SBIT,IBIT,CBIT,Reporter,LogSplitter,
2015-09-29T12:32:19.645Z,1443529939.645 [DVL_micro](INFO): Initializing
2015-09-29T12:32:19.814Z,1443529939.814 [DeadReckonUsingMultipleVelocitySources](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T12:32:19.837Z,1443529939.837 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T12:32:19.953Z,1443529939.953 [BuoyancyServo](DEBUG): Initializing BuoyancyServo.
2015-09-29T12:32:19.959Z,1443529939.959 [ElevatorServo](DEBUG): Initializing ElevatorServo.
2015-09-29T12:32:19.984Z,1443529939.984 [MassServo](DEBUG): Initializing MassServo.
2015-09-29T12:32:20.006Z,1443529940.006 [RudderServo](DEBUG): Initializing RudderServo.
2015-09-29T12:32:20.022Z,1443529940.022 [ThrusterServo](DEBUG): Initializing ThrusterServo.
2015-09-29T12:32:20.255Z,1443529940.255 [DeadReckonUsingMultipleVelocitySources](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T12:32:20.256Z,1443529940.256 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T12:32:29.406Z,1443529949.406 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T12:32:29.736Z,1443529949.736 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T12:32:29.872Z,1443529949.872 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T12:32:30.273Z,1443529950.273 [DataOverHttps](INFO): setting available, lastComms_.elapsed()=0.003300
2015-09-29T12:32:30.276Z,1443529950.276 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T12:32:30.671Z,1443529950.671 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T12:32:31.070Z,1443529951.070 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T12:32:31.471Z,1443529951.471 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T12:32:31.871Z,1443529951.871 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T12:32:32.270Z,1443529952.270 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T12:32:32.670Z,1443529952.670 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T12:32:33.069Z,1443529953.069 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T12:32:33.470Z,1443529953.470 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T12:32:33.870Z,1443529953.870 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T12:32:34.271Z,1443529954.271 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T12:32:34.669Z,1443529954.669 [NAL9602](INFO): No messages in MT queue
2015-09-29T12:32:34.670Z,1443529954.670 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T12:32:35.070Z,1443529955.070 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T12:32:35.474Z,1443529955.474 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T12:32:35.870Z,1443529955.870 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T12:32:36.270Z,1443529956.270 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T12:32:36.670Z,1443529956.670 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T12:32:37.070Z,1443529957.070 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T12:32:37.469Z,1443529957.469 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T12:32:37.870Z,1443529957.870 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T12:32:38.269Z,1443529958.269 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T12:32:38.670Z,1443529958.670 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T12:32:39.070Z,1443529959.070 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T12:32:39.470Z,1443529959.470 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T12:32:39.504Z,1443529959.504 [SBIT](IMPORTANT): Beginning Startup BIT
2015-09-29T12:32:39.869Z,1443529959.869 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T12:32:40.274Z,1443529960.274 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T12:32:40.675Z,1443529960.675 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T12:32:41.074Z,1443529961.074 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T12:32:41.470Z,1443529961.470 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T12:32:41.870Z,1443529961.870 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T12:32:42.271Z,1443529962.271 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T12:32:42.670Z,1443529962.670 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T12:32:43.070Z,1443529963.070 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T12:32:43.470Z,1443529963.470 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T12:32:43.870Z,1443529963.870 [D