2015-09-29T12:16:24.133Z,1443528984.133 [Supervisor](DEBUG): Initializing supervisor.
2015-09-29T12:16:24.137Z,1443528984.137 [SyncHandler](DEBUG): Created PCaller Thread at 4034C4E0
2015-09-29T12:16:24.137Z,1443528984.137 [SyncHandler](INFO): Protected caller Thread ID is 761
2015-09-29T12:16:24.138Z,1443528984.138 [ComponentRegistry](DEBUG): Component "controlThread" handled in its own thread.
2015-09-29T12:16:24.141Z,1443528984.141 [controlThread ThreadHandler](DEBUG): Created PCaller Thread at 4037C4E0
2015-09-29T12:16:24.141Z,1443528984.141 [controlThread ThreadHandler](INFO): Protected caller Thread ID is 762
2015-09-29T12:16:24.144Z,1443528984.144 [ComponentRegistry](DEBUG): SyncComponent "CycleStarter" handled in the control thread.
2015-09-29T12:16:24.156Z,1443528984.156 [ComponentRegistry](DEBUG): Component "CommandLine" handled in its own thread.
2015-09-29T12:16:24.161Z,1443528984.161 [CommandLine ThreadHandler](DEBUG): Created PCaller Thread at 403AC4E0
2015-09-29T12:16:24.161Z,1443528984.161 [CommandLine ThreadHandler](INFO): Protected caller Thread ID is 763
2015-09-29T12:16:24.162Z,1443528984.162 [ComponentRegistry](DEBUG): Component "logger" handled in its own thread.
2015-09-29T12:16:24.165Z,1443528984.165 [logger ThreadHandler](DEBUG): Created PCaller Thread at 403DC4E0
2015-09-29T12:16:24.165Z,1443528984.165 [logger ThreadHandler](INFO): Protected caller Thread ID is 764
2015-09-29T12:16:24.167Z,1443528984.167 [ComponentRegistry](DEBUG): SyncComponent "LogSplitter" handled in the control thread.
2015-09-29T12:16:24.168Z,1443528984.168 [Supervisor](INFO): Looking for Config files in directory: Config/
2015-09-29T12:16:24.171Z,1443528984.171 [Supervisor](INFO): Opening Config file at: Config/Control.cfg
2015-09-29T12:16:24.566Z,1443528984.566 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Control
2015-09-29T12:16:24.568Z,1443528984.568 [Supervisor](INFO): Opening Config file at: Config/BIT.cfg
2015-09-29T12:16:24.762Z,1443528984.762 [ComponentRegistry](DEBUG): Loaded Config Component "Config/BIT
2015-09-29T12:16:24.764Z,1443528984.764 [Supervisor](INFO): Opening Config file at: Config/Derivation.cfg
2015-09-29T12:16:24.908Z,1443528984.908 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Derivation
2015-09-29T12:16:24.909Z,1443528984.909 [Supervisor](INFO): Opening Config file at: Config/Estimation.cfg
2015-09-29T12:16:25.057Z,1443528985.057 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Estimation
2015-09-29T12:16:25.058Z,1443528985.058 [Supervisor](INFO): Opening Config file at: Config/Guidance.cfg
2015-09-29T12:16:25.156Z,1443528985.156 [Supervisor](INFO): Opening Config file at: Config/Navigation.cfg
2015-09-29T12:16:25.377Z,1443528985.377 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Navigation
2015-09-29T12:16:25.378Z,1443528985.378 [Supervisor](INFO): Opening Config file at: Config/Sample.cfg
2015-09-29T12:16:25.473Z,1443528985.473 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Sample
2015-09-29T12:16:25.474Z,1443528985.474 [Supervisor](INFO): Opening Config file at: Config/Science.cfg
2015-09-29T12:16:25.790Z,1443528985.790 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Science
2015-09-29T12:16:25.790Z,1443528985.790 [Supervisor](INFO): Opening Config file at: Config/Sensor.cfg
2015-09-29T12:16:26.190Z,1443528986.190 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Sensor
2015-09-29T12:16:26.190Z,1443528986.190 [Supervisor](INFO): Opening Config file at: Config/Servo.cfg
2015-09-29T12:16:26.546Z,1443528986.546 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Servo
2015-09-29T12:16:26.548Z,1443528986.548 [Supervisor](INFO): Opening Config file at: Config/Simulator.cfg
2015-09-29T12:16:27.150Z,1443528987.150 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Simulator
2015-09-29T12:16:27.151Z,1443528987.151 [Supervisor](INFO): Opening Config file at: Config/logger.cfg
2015-09-29T12:16:27.382Z,1443528987.382 [ComponentRegistry](DEBUG): Loaded Config Component "Config/logger
2015-09-29T12:16:27.382Z,1443528987.382 [Supervisor](INFO): Opening Config file at: Config/secure.cfg
2015-09-29T12:16:27.497Z,1443528987.497 [ComponentRegistry](DEBUG): Loaded Config Component "Config/secure
2015-09-29T12:16:27.498Z,1443528987.498 [Supervisor](INFO): Opening Config file at: Config/vehicle.cfg
2015-09-29T12:16:28.020Z,1443528988.020 [ComponentRegistry](DEBUG): Loaded Config Component "Config/vehicle
2015-09-29T12:16:28.021Z,1443528988.021 [Supervisor](INFO): Opening Config file at: Config/workSite.cfg
2015-09-29T12:16:28.174Z,1443528988.174 [ComponentRegistry](DEBUG): Loaded Config Component "Config/workSite
2015-09-29T12:16:28.176Z,1443528988.176 [Supervisor](INFO): Looking for Config files in directory: Config/(none)/
2015-09-29T12:16:28.176Z,1443528988.176 [Supervisor](FAULT): Ignoring configuration overrides from Data/persisted.cfg
2015-09-29T12:16:28.181Z,1443528988.181 [Module Loader](DEBUG): Loading Module at Modules/Control.so
2015-09-29T12:16:28.256Z,1443528988.256 [VerticalControl](DEBUG): Construct VerticalControl.
2015-09-29T12:16:28.390Z,1443528988.390 [VerticalControl] Loaded
2015-09-29T12:16:28.390Z,1443528988.390 [ComponentRegistry](DEBUG): SyncComponent "VerticalControl" handled in the control thread.
2015-09-29T12:16:28.391Z,1443528988.391 [HorizontalControl](DEBUG): Construct HorizontalControl.
2015-09-29T12:16:28.471Z,1443528988.471 [HorizontalControl] Loaded
2015-09-29T12:16:28.471Z,1443528988.471 [ComponentRegistry](DEBUG): SyncComponent "HorizontalControl" handled in the control thread.
2015-09-29T12:16:28.472Z,1443528988.472 [SpeedControl](DEBUG): Construct SpeedControl.
2015-09-29T12:16:28.478Z,1443528988.478 [SpeedControl] Loaded
2015-09-29T12:16:28.478Z,1443528988.478 [ComponentRegistry](DEBUG): SyncComponent "SpeedControl" handled in the control thread.
2015-09-29T12:16:28.479Z,1443528988.479 [LoopControl](DEBUG): Construct LoopControl.
2015-09-29T12:16:28.479Z,1443528988.479 [LoopControl] Loaded
2015-09-29T12:16:28.480Z,1443528988.480 [ComponentRegistry](DEBUG): SyncComponent "LoopControl" handled in the control thread.
2015-09-29T12:16:28.480Z,1443528988.480 [Module Loader](DEBUG): Loaded Module: Control (Contains the Control components, such as Depth, Heading, and Speed Control)
2015-09-29T12:16:28.485Z,1443528988.485 [Module Loader](DEBUG): Loading Module at Modules/BIT.so
2015-09-29T12:16:28.645Z,1443528988.645 [SBIT](DEBUG): Construct Startup Built In Test.
2015-09-29T12:16:28.658Z,1443528988.658 [SBIT] Loaded
2015-09-29T12:16:28.658Z,1443528988.658 [ComponentRegistry](DEBUG): SyncComponent "SBIT" handled in the control thread.
2015-09-29T12:16:28.659Z,1443528988.659 [IBIT](DEBUG): Construct Initiated Built In Test.
2015-09-29T12:16:28.693Z,1443528988.693 [IBIT] Loaded
2015-09-29T12:16:28.693Z,1443528988.693 [ComponentRegistry](DEBUG): SyncComponent "IBIT" handled in the control thread.
2015-09-29T12:16:28.695Z,1443528988.695 [CBIT](DEBUG): Construct Continuous Built In Test.
2015-09-29T12:16:28.849Z,1443528988.849 [CBIT] Loaded
2015-09-29T12:16:28.850Z,1443528988.850 [ComponentRegistry](DEBUG): SyncComponent "CBIT" handled in the control thread.
2015-09-29T12:16:28.850Z,1443528988.850 [Module Loader](DEBUG): Loaded Module: BIT (Contains the BuiltInTest components, such as C Built In Test)
2015-09-29T12:16:28.851Z,1443528988.851 [Module Loader](DEBUG): Loading Module at Modules/Derivation.so
2015-09-29T12:16:28.892Z,1443528988.892 [DepthRateCalculator] Loaded
2015-09-29T12:16:28.892Z,1443528988.892 [ComponentRegistry](DEBUG): SyncComponent "DepthRateCalculator" handled in the control thread.
2015-09-29T12:16:28.898Z,1443528988.898 [PitchRateCalculator] Loaded
2015-09-29T12:16:28.898Z,1443528988.898 [ComponentRegistry](DEBUG): SyncComponent "PitchRateCalculator" handled in the control thread.
2015-09-29T12:16:28.914Z,1443528988.914 [SpeedCalculator] Loaded
2015-09-29T12:16:28.914Z,1443528988.914 [ComponentRegistry](DEBUG): SyncComponent "SpeedCalculator" handled in the control thread.
2015-09-29T12:16:28.931Z,1443528988.931 [TempGradientCalculator] Loaded
2015-09-29T12:16:28.931Z,1443528988.931 [ComponentRegistry](DEBUG): SyncComponent "TempGradientCalculator" handled in the control thread.
2015-09-29T12:16:28.953Z,1443528988.953 [VerticalTemperatureHomogeneityIndexCalculator] Loaded
2015-09-29T12:16:28.953Z,1443528988.953 [ComponentRegistry](DEBUG): SyncComponent "VerticalTemperatureHomogeneityIndexCalculator" handled in the control thread.
2015-09-29T12:16:28.958Z,1443528988.958 [YawRateCalculator] Loaded
2015-09-29T12:16:28.959Z,1443528988.959 [ComponentRegistry](DEBUG): SyncComponent "YawRateCalculator" handled in the control thread.
2015-09-29T12:16:28.959Z,1443528988.959 [Module Loader](DEBUG): Loaded Module: Derivation (Contains the base derivation components)
2015-09-29T12:16:28.960Z,1443528988.960 [Module Loader](DEBUG): Loading Module at Modules/Estimation.so
2015-09-29T12:16:29.078Z,1443528989.078 [StratificationFrontDetector](INFO): threshold set to: 0.399988 degC
2015-09-29T12:16:29.078Z,1443528989.078 [StratificationFrontDetector](DEBUG): (re)initializing
2015-09-29T12:16:29.078Z,1443528989.078 [StratificationFrontDetector] Loaded
2015-09-29T12:16:29.079Z,1443528989.079 [ComponentRegistry](DEBUG): SyncComponent "StratificationFrontDetector" handled in the control thread.
2015-09-29T12:16:29.079Z,1443528989.079 [Module Loader](DEBUG): Loaded Module: Estimation (Contains the base estimation components)
2015-09-29T12:16:29.080Z,1443528989.080 [Module Loader](DEBUG): Loading Module at Modules/Guidance.so
2015-09-29T12:16:29.371Z,1443528989.371 [Module Loader](DEBUG): Loaded Module: Guidance (Contains behaviors and commands)
2015-09-29T12:16:29.371Z,1443528989.371 [Module Loader](DEBUG): Loading Module at Modules/Navigation.so
2015-09-29T12:16:29.501Z,1443528989.501 [DeadReckonUsingMultipleVelocitySources] Loaded
2015-09-29T12:16:29.501Z,1443528989.501 [ComponentRegistry](DEBUG): SyncComponent "DeadReckonUsingMultipleVelocitySources" handled in the control thread.
2015-09-29T12:16:29.566Z,1443528989.566 [DeadReckonUsingSpeedCalculator] Loaded
2015-09-29T12:16:29.566Z,1443528989.566 [ComponentRegistry](DEBUG): SyncComponent "DeadReckonUsingSpeedCalculator" handled in the control thread.
2015-09-29T12:16:29.584Z,1443528989.584 [NavChart] Loaded
2015-09-29T12:16:29.584Z,1443528989.584 [ComponentRegistry](DEBUG): SyncComponent "NavChart" handled in the control thread.
2015-09-29T12:16:29.589Z,1443528989.589 [UniversalFixResidualReporter] Loaded
2015-09-29T12:16:29.590Z,1443528989.590 [ComponentRegistry](DEBUG): SyncComponent "UniversalFixResidualReporter" handled in the control thread.
2015-09-29T12:16:29.590Z,1443528989.590 [Module Loader](DEBUG): Loaded Module: Navigation (Contains the base navigation components)
2015-09-29T12:16:29.591Z,1443528989.591 [Module Loader](DEBUG): Loading Module at Modules/Sample.so
2015-09-29T12:16:29.599Z,1443528989.599 [Module Loader](DEBUG): Loaded Module: Sample (This is a Sample Module of Sample Components)
2015-09-29T12:16:29.600Z,1443528989.600 [Module Loader](DEBUG): Loading Module at Modules/Science.so
2015-09-29T12:16:29.898Z,1443528989.898 [CTD_NeilBrown] Loaded
2015-09-29T12:16:29.899Z,1443528989.899 [ComponentRegistry](DEBUG): Component "CTD_NeilBrown" handled in its own thread.
2015-09-29T12:16:29.901Z,1443528989.901 [CTD_NeilBrown ThreadHandler](DEBUG): Created PCaller Thread at 4059D4E0
2015-09-29T12:16:29.901Z,1443528989.901 [CTD_NeilBrown ThreadHandler](INFO): Protected caller Thread ID is 810
2015-09-29T12:16:29.914Z,1443528989.914 [ISUS] Loaded
2015-09-29T12:16:29.914Z,1443528989.914 [ComponentRegistry](DEBUG): SyncComponent "ISUS" handled in the control thread.
2015-09-29T12:16:29.929Z,1443528989.929 [PAR_Licor] Loaded
2015-09-29T12:16:29.929Z,1443528989.929 [ComponentRegistry](DEBUG): SyncComponent "PAR_Licor" handled in the control thread.
2015-09-29T12:16:29.989Z,1443528989.989 [WetLabsBB2FL] Loaded
2015-09-29T12:16:29.989Z,1443528989.989 [ComponentRegistry](DEBUG): Component "WetLabsBB2FL" handled in its own thread.
2015-09-29T12:16:29.993Z,1443528989.993 [WetLabsBB2FL ThreadHandler](DEBUG): Created PCaller Thread at 405CD4E0
2015-09-29T12:16:29.993Z,1443528989.993 [WetLabsBB2FL ThreadHandler](INFO): Protected caller Thread ID is 811
2015-09-29T12:16:29.994Z,1443528989.994 [Module Loader](DEBUG): Loaded Module: Science (Contains the science components)
2015-09-29T12:16:29.994Z,1443528989.994 [Module Loader](DEBUG): Loading Module at Modules/Sensor.so
2015-09-29T12:16:30.729Z,1443528990.729 [AHRS_sp3003D] Loaded
2015-09-29T12:16:30.730Z,1443528990.730 [ComponentRegistry](DEBUG): SyncComponent "AHRS_sp3003D" handled in the control thread.
2015-09-29T12:16:30.924Z,1443528990.924 [DataOverHttps] Loaded
2015-09-29T12:16:30.925Z,1443528990.925 [ComponentRegistry](DEBUG): SyncComponent "DataOverHttps" handled in the control thread.
2015-09-29T12:16:30.938Z,1443528990.938 [Depth_Keller] Loaded
2015-09-29T12:16:30.938Z,1443528990.938 [ComponentRegistry](DEBUG): SyncComponent "Depth_Keller" handled in the control thread.
2015-09-29T12:16:30.943Z,1443528990.943 [DropWeight] Loaded
2015-09-29T12:16:30.944Z,1443528990.944 [ComponentRegistry](DEBUG): SyncComponent "DropWeight" handled in the control thread.
2015-09-29T12:16:31.101Z,1443528991.101 [DVL_micro] Loaded
2015-09-29T12:16:31.102Z,1443528991.102 [ComponentRegistry](DEBUG): SyncComponent "DVL_micro" handled in the control thread.
2015-09-29T12:16:31.210Z,1443528991.210 [NAL9602] Loaded
2015-09-29T12:16:31.210Z,1443528991.210 [ComponentRegistry](DEBUG): SyncComponent "NAL9602" handled in the control thread.
2015-09-29T12:16:31.257Z,1443528991.257 [Onboard] Loaded
2015-09-29T12:16:31.258Z,1443528991.258 [ComponentRegistry](DEBUG): SyncComponent "Onboard" handled in the control thread.
2015-09-29T12:16:31.269Z,1443528991.269 [Radio_Surface] Loaded
2015-09-29T12:16:31.270Z,1443528991.270 [ComponentRegistry](DEBUG): Component "Radio_Surface" handled in its own thread.
2015-09-29T12:16:31.273Z,1443528991.273 [Radio_Surface ThreadHandler](DEBUG): Created PCaller Thread at 408114E0
2015-09-29T12:16:31.273Z,1443528991.273 [Radio_Surface ThreadHandler](INFO): Protected caller Thread ID is 812
2015-09-29T12:16:31.432Z,1443528991.432 [DAT] Loaded
2015-09-29T12:16:31.433Z,1443528991.433 [ComponentRegistry](DEBUG): SyncComponent "DAT" handled in the control thread.
2015-09-29T12:16:31.439Z,1443528991.439 [SCPI] Loaded
2015-09-29T12:16:31.440Z,1443528991.440 [ComponentRegistry](DEBUG): SyncComponent "SCPI" handled in the control thread.
2015-09-29T12:16:31.440Z,1443528991.440 [Module Loader](DEBUG): Loaded Module: Sensor (Contains the sensor components)
2015-09-29T12:16:31.441Z,1443528991.441 [Module Loader](DEBUG): Loading Module at Modules/Servo.so
2015-09-29T12:16:31.571Z,1443528991.571 [BuoyancyServo] Loaded
2015-09-29T12:16:31.571Z,1443528991.571 [ComponentRegistry](DEBUG): SyncComponent "BuoyancyServo" handled in the control thread.
2015-09-29T12:16:31.588Z,1443528991.588 [ElevatorServo] Loaded
2015-09-29T12:16:31.588Z,1443528991.588 [ComponentRegistry](DEBUG): SyncComponent "ElevatorServo" handled in the control thread.
2015-09-29T12:16:31.600Z,1443528991.600 [MassServo] Loaded
2015-09-29T12:16:31.600Z,1443528991.600 [ComponentRegistry](DEBUG): SyncComponent "MassServo" handled in the control thread.
2015-09-29T12:16:31.612Z,1443528991.612 [RudderServo] Loaded
2015-09-29T12:16:31.613Z,1443528991.613 [ComponentRegistry](DEBUG): SyncComponent "RudderServo" handled in the control thread.
2015-09-29T12:16:31.628Z,1443528991.628 [ThrusterServo] Loaded
2015-09-29T12:16:31.628Z,1443528991.628 [ComponentRegistry](DEBUG): SyncComponent "ThrusterServo" handled in the control thread.
2015-09-29T12:16:31.629Z,1443528991.629 [Module Loader](DEBUG): Loaded Module: Servo (This is the module containing motor controllers)
2015-09-29T12:16:31.629Z,1443528991.629 [Module Loader](DEBUG): Loading Module at Modules/Simulator.so
2015-09-29T12:16:31.830Z,1443528991.830 [InternalSim] Loaded
2015-09-29T12:16:31.830Z,1443528991.830 [ComponentRegistry](DEBUG): SyncComponent "InternalSim" handled in the control thread.
2015-09-29T12:16:31.831Z,1443528991.831 [Module Loader](DEBUG): Loaded Module: Simulator (This is the module containing the Simulator)
2015-09-29T12:16:31.832Z,1443528991.832 [Module Loader](DEBUG): Loading Module at Modules/Trigger.so
2015-09-29T12:16:31.871Z,1443528991.871 [Module Loader](DEBUG): Loaded Module: Trigger (Contains triggers for use in missions)
2015-09-29T12:16:31.879Z,1443528991.879 [ComponentRegistry](DEBUG): SyncComponent "MissionManager" handled in the control thread.
2015-09-29T12:16:31.880Z,1443528991.880 [ComponentRegistry](DEBUG): SyncComponent "Reporter" handled in the control thread.
2015-09-29T12:16:31.886Z,1443528991.886 [ComponentRegistry](DEBUG): Component "NavChartDb" handled in its own thread.
2015-09-29T12:16:31.889Z,1443528991.889 [NavChartDb ThreadHandler](DEBUG): Created PCaller Thread at 408BF4E0
2015-09-29T12:16:31.889Z,1443528991.889 [NavChartDb ThreadHandler](INFO): Protected caller Thread ID is 813
2015-09-29T12:16:31.894Z,1443528991.894 [Supervisor](INFO): Main Thread ID is 760
2015-09-29T12:16:31.894Z,1443528991.894 [Supervisor](DEBUG): Running supervisor.
2015-09-29T12:16:31.895Z,1443528991.895 [CommandLine ThreadHandler](INFO): Handler Thread ID is 814
2015-09-29T12:16:31.901Z,1443528991.901 [controlThread ThreadHandler](INFO): Handler Thread ID is 815
2015-09-29T12:16:31.902Z,1443528991.902 [controlThread](DEBUG): Initializing ControlThread
2015-09-29T12:16:31.902Z,1443528991.902 [VerticalControl](DEBUG): Initialize VerticalControlComponent.
2015-09-29T12:16:31.904Z,1443528991.904 [HorizontalControl](DEBUG): Initialize HorizontalControlComponent.
2015-09-29T12:16:31.905Z,1443528991.905 [SpeedControl](DEBUG): Initialize SpeedControlComponent.
2015-09-29T12:16:31.906Z,1443528991.906 [LoopControl](DEBUG): Initialize LoopControlComponent.
2015-09-29T12:16:31.906Z,1443528991.906 [SBIT](INFO): Initialize SBIT Component.
2015-09-29T12:16:31.907Z,1443528991.907 [SBIT](IMPORTANT): Tethys CM Info: SVN revision:12634
2015-09-29T12:16:31.908Z,1443528991.908 [SBIT](INFO): Kernel Reporting Different Release From Configuration.
Kernel Expected: 2.6.32-45-generic-pae
Kernel Reported: 2.6.27.8
2015-09-29T12:16:31.908Z,1443528991.908 [SBIT](INFO): Kernel Reporting Different Version From Configuration.
Kernel Expected: #102-Ubuntu SMP Wed Jan 2 22:10:16 UTC 2013
Kernel Reported: #641 PREEMPT Mon Sep 28 16:45:10 PDT 2015
2015-09-29T12:16:31.909Z,1443528991.909 [SBIT](INFO): Beginning SBIT in 20.000000 seconds.
2015-09-29T12:16:31.910Z,1443528991.910 [IBIT](INFO): Initialize IBIT Component.
2015-09-29T12:16:31.911Z,1443528991.911 [CBIT](DEBUG): Initialize CBIT Component.
2015-09-29T12:16:31.911Z,1443528991.911 [CBIT](FAULT): LAST RESTART WAS UNINTENTIONAL.
2015-09-29T12:16:31.911Z,1443528991.911 [CBIT](INFO): Last reboot was NOT due to watchdog timer.
2015-09-29T12:16:31.911Z,1443528991.911 [DepthRateCalculator](DEBUG): Initializing DepthRateCalculator.
2015-09-29T12:16:31.912Z,1443528991.912 [PitchRateCalculator](DEBUG): Initializing PitchRateCalculator.
2015-09-29T12:16:31.912Z,1443528991.912 [SpeedCalculator](DEBUG): Initializing SpeedCalculator.
2015-09-29T12:16:31.912Z,1443528991.912 [TempGradientCalculator](DEBUG): Initializing TempGradientCalculator.
2015-09-29T12:16:31.913Z,1443528991.913 [VerticalTemperatureHomogeneityIndexCalculator](DEBUG): (re)initializing
2015-09-29T12:16:31.914Z,1443528991.914 [YawRateCalculator](DEBUG): Initializing YawRateCalculator.
2015-09-29T12:16:31.914Z,1443528991.914 [DeadReckonUsingMultipleVelocitySources](DEBUG): Initializing DeadReckonUsingMultipleVelocitySources component.
2015-09-29T12:16:31.915Z,1443528991.915 [DeadReckonUsingMultipleVelocitySources](INFO): Will consider orientation measurement stale after 120s.
2015-09-29T12:16:31.915Z,1443528991.915 [DeadReckonUsingMultipleVelocitySources](INFO): Will consider velocity measurement stale after 20s.
2015-09-29T12:16:31.915Z,1443528991.915 [DeadReckonUsingSpeedCalculator](DEBUG): Initializing DeadReckonUsingSpeedCalculator component.
2015-09-29T12:16:31.916Z,1443528991.916 [DeadReckonUsingSpeedCalculator](INFO): Will consider orientation measurement stale after 120s.
2015-09-29T12:16:31.916Z,1443528991.916 [DeadReckonUsingSpeedCalculator](INFO): Will consider velocity measurement stale after 20s.
2015-09-29T12:16:31.917Z,1443528991.917 [NavChart](DEBUG): Initialize NavChart Navigation.
2015-09-29T12:16:31.917Z,1443528991.917 [UniversalFixResidualReporter](DEBUG): Initializing UniversalFixResidualReporter component.
2015-09-29T12:16:31.922Z,1443528991.922 [InternalSim](DEBUG):  InternalSim initializing...
2015-09-29T12:16:31.957Z,1443528991.957 [logger ThreadHandler](INFO): Handler Thread ID is 816
2015-09-29T12:16:32.053Z,1443528992.053 [CTD_NeilBrown ThreadHandler](INFO): Handler Thread ID is 817
2015-09-29T12:16:32.055Z,1443528992.055 [WetLabsBB2FL ThreadHandler](INFO): Handler Thread ID is 818
2015-09-29T12:16:32.133Z,1443528992.133 [Radio_Surface ThreadHandler](INFO): Handler Thread ID is 819
2015-09-29T12:16:32.148Z,1443528992.148 [NavChartDb ThreadHandler](INFO): Handler Thread ID is 820
2015-09-29T12:16:32.155Z,1443528992.155 [NavChartDb](INFO): Looking for Electronic Nav Chart files in directory: Resources
2015-09-29T12:16:32.162Z,1443528992.162 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US1WC07M.000
2015-09-29T12:16:32.162Z,1443528992.162 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US2WC11M.000
2015-09-29T12:16:32.162Z,1443528992.162 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US3CA52M.000
2015-09-29T12:16:32.163Z,1443528992.163 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US4CA60M.000
2015-09-29T12:16:32.163Z,1443528992.163 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA50M.000
2015-09-29T12:16:32.163Z,1443528992.163 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA61M.000
2015-09-29T12:16:32.163Z,1443528992.163 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA62M.000
2015-09-29T12:16:32.164Z,1443528992.164 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA83M.000
2015-09-29T12:16:32.194Z,1443528992.194 [MissionManager](INFO): Loading Mission: Missions/Startup.xml
2015-09-29T12:16:32.242Z,1443528992.242 [Startup:A.GoToSurface](DEBUG): Construct GoToSurface.
2015-09-29T12:16:32.281Z,1443528992.281 [MissionManager](DEBUG): 
<?xml version="1.0" encoding="UTF-8"?>
<Mission xmlns="Tethys"
       xmlns:Control="Tethys/Control"
       xmlns:Guidance="Tethys/Guidance" 
       xmlns:Units="Tethys/Units"
       xmlns:Universal="Tethys/Universal"
       xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
       xsi:schemaLocation="Tethys http://okeanids.mbari.org/tethys/Xml/Tethys.xsd
                           Tethys/Control http://okeanids.mbari.org/tethys/Xml/Control.xsd
                           Tethys/Guidance http://okeanids.mbari.org/tethys/Xml/Guidance.xsd
                           Tethys/Units http://okeanids.mbari.org/tethys/Xml/Units.xsd
                           Tethys/Universal http://okeanids.mbari.org/tethys/Xml/Universal.xsd"
       Id="Startup">

    <Guidance:GoToSurface>
        <Progression/>
    </Guidance:GoToSurface>

    <Aggregate Id="StartupSatComms">

        <Sequence/>

        <ReadDatum>
            <Timeout Duration="P1M" />
            <Universal:latitude_fix/>
        </ReadDatum>

        <ReadDatum>
            <Timeout Duration="P1M" />
            <Universal:platform_communications/>
        </ReadDatum>

    </Aggregate>

</Mission>


2015-09-29T12:16:32.282Z,1443528992.282 [MissionManager](INFO): Loading Mission: Missions/Default.xml
2015-09-29T12:16:32.348Z,1443528992.348 [MissionManager](INFO): DefineArg Default.ElapsedSinceDefaultStarted = 0.000000 min
2015-09-29T12:16:32.349Z,1443528992.349 [Default:A.GoToSurface](DEBUG): Construct GoToSurface.
2015-09-29T12:16:32.376Z,1443528992.376 [Default:CheckIn:Read_Iridium:A_Timeout:A.Execute](DEBUG): Construct Execute.
2015-09-29T12:16:32.404Z,1443528992.404 [Default:CheckIn:C.Wait](DEBUG): Construct Wait.
2015-09-29T12:16:32.410Z,1443528992.410 [Default:D.Execute](DEBUG): Construct Execute.
2015-09-29T12:16:32.429Z,1443528992.429 [MissionManager](DEBUG): 
<?xml version="1.0" encoding="UTF-8"?>
<Mission xmlns="Tethys"
xmlns:Guidance="Tethys/Guidance"
xmlns:Units="Tethys/Units"
xmlns:Universal="Tethys/Universal"
xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
xsi:schemaLocation="Tethys http://okeanids.mbari.org/tethys/Xml/Tethys.xsd
Tethys/Guidance http://okeanids.mbari.org/tethys/Xml/Guidance.xsd
Tethys/Units http://okeanids.mbari.org/tethys/Xml/Units.xsd
Tethys/Universal http://okeanids.mbari.org/tethys/Xml/Universal.xsd"
Id="Default">

    <DefineArg Name="ElapsedSinceDefaultStarted"><Units:minute/><Value>0</Value></DefineArg>

    <Guidance:GoToSurface>
        <Progression/>
    </Guidance:GoToSurface>

    <Aggregate Id="CheckIn">

        <Sequence Repeat="288"/>

        <ReadDatum Id="Read_GPS">
            <Sequence/>
            <Timeout Duration="P5M"/>
            <Universal:time_fix/>
        </ReadDatum>

        <ReadDatum Id="Read_Iridium">
            <Sequence/>
            <Timeout Duration="P2H">
                <Guidance:Execute>
                    <Sequence/>
                    <Setting><Guidance:Execute.command/><String>Burn 300</String></Setting>
                </Guidance:Execute>
                <Syslog Severity="Critical">Dropped weight due to communications timeout.</Syslog>
            </Timeout>
            <Universal:platform_communications/>
        </ReadDatum>

        <Guidance:Wait>
            <Sequence/>
            <Setting><Guidance:Wait.duration/><Units:minute/><Value>5</Value></Setting>
        </Guidance:Wait>

        <Assign><Sequence/><Arg Name="ElapsedSinceDefaultStarted"/><Elapsed><Universal:mission_started/></Elapsed></Assign>

        <Syslog Severity="Important">Default mission has been running for <Arg Name="ElapsedSinceDefaultStarted"/><Units:minute/></Syslog>

    </Aggregate>

    <Syslog Severity="Important">Restarting logs and Default mission.</Syslog>

    <Guidance:Execute>
        <Sequence/>
        <Setting><Guidance:Execute.command/><String>restart logs</String></Setting>
    </Guidance:Execute>

</Mission>


2015-09-29T12:16:32.435Z,1443528992.435 [controlThread](DEBUG): Component order: CycleStarter,InternalSim,ISUS,PAR_Licor,AHRS_sp3003D,DataOverHttps,Depth_Keller,DropWeight,DVL_micro,NAL9602,Onboard,DAT,SCPI,PAR_Licor,Depth_Keller,DepthRateCalculator,PitchRateCalculator,SpeedCalculator,TempGradientCalculator,VerticalTemperatureHomogeneityIndexCalculator,YawRateCalculator,StratificationFrontDetector,DeadReckonUsingMultipleVelocitySources,DeadReckonUsingSpeedCalculator,NavChart,UniversalFixResidualReporter,MissionManager,VerticalControl,HorizontalControl,SpeedControl,LoopControl,BuoyancyServo,ElevatorServo,MassServo,RudderServo,ThrusterServo,SBIT,IBIT,CBIT,Reporter,LogSplitter,
2015-09-29T12:16:32.692Z,1443528992.692 [DVL_micro](INFO): Initializing
2015-09-29T12:16:32.861Z,1443528992.861 [DeadReckonUsingMultipleVelocitySources](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T12:16:32.873Z,1443528992.873 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T12:16:33.002Z,1443528993.002 [BuoyancyServo](DEBUG): Initializing BuoyancyServo.
2015-09-29T12:16:33.016Z,1443528993.016 [ElevatorServo](DEBUG): Initializing ElevatorServo.
2015-09-29T12:16:33.045Z,1443528993.045 [MassServo](DEBUG): Initializing MassServo.
2015-09-29T12:16:33.069Z,1443528993.069 [RudderServo](DEBUG): Initializing RudderServo.
2015-09-29T12:16:33.075Z,1443528993.075 [ThrusterServo](DEBUG): Initializing ThrusterServo.
2015-09-29T12:16:33.331Z,1443528993.331 [DeadReckonUsingMultipleVelocitySources](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T12:16:33.332Z,1443528993.332 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T12:16:42.385Z,1443529002.385 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T12:16:42.708Z,1443529002.708 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T12:16:42.851Z,1443529002.851 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T12:16:43.253Z,1443529003.253 [DataOverHttps](INFO): setting available, lastComms_.elapsed()=0.003400
2015-09-29T12:16:43.256Z,1443529003.256 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T12:16:43.650Z,1443529003.650 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T12:16:44.051Z,1443529004.051 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T12:16:44.450Z,1443529004.450 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T12:16:44.850Z,1443529004.850 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T12:16:45.249Z,1443529005.249 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T12:16:45.650Z,1443529005.650 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T12:16:46.049Z,1443529006.049 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T12:16:46.457Z,1443529006.457 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T12:16:46.849Z,1443529006.849 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T12:16:47.249Z,1443529007.249 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T12:16:47.648Z,1443529007.648 [NAL9602](INFO): No messages in MT queue
2015-09-29T12:16:47.649Z,1443529007.649 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T12:16:48.050Z,1443529008.050 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T12:16:48.449Z,1443529008.449 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T12:16:48.850Z,1443529008.850 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T12:16:49.250Z,1443529009.250 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T12:16:49.650Z,1443529009.650 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T12:16:50.050Z,1443529010.050 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T12:16:50.450Z,1443529010.450 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T12:16:50.850Z,1443529010.850 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T12:16:51.249Z,1443529011.249 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T12:16:51.649Z,1443529011.649 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T12:16:52.049Z,1443529012.049 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T12:16:52.450Z,1443529012.450 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T12:16:52.514Z,1443529012.514 [SBIT](IMPORTANT): Beginning Startup BIT
2015-09-29T12:16:52.849Z,1443529012.849 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T12:16:53.249Z,1443529013.249 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T12:16:53.650Z,1443529013.650 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T12:16:54.049Z,1443529014.049 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T12:16:54.450Z,1443529014.450 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T12:16:54.849Z,1443529014.849 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T12:16:55.259Z,1443529015.259 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T12:16:55.649Z,1443529015.649 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T12:16:56.059Z,1443529016.059 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T12:16:56.449Z,1443529016.449 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T12:16:56.849Z,1443529016.849 [D