2015-09-29T12:00:33.220Z,1443528033.220 [Supervisor](DEBUG): Initializing supervisor.
2015-09-29T12:00:33.223Z,1443528033.223 [SyncHandler](DEBUG): Created PCaller Thread at 4034C4E0
2015-09-29T12:00:33.223Z,1443528033.223 [SyncHandler](INFO): Protected caller Thread ID is 761
2015-09-29T12:00:33.224Z,1443528033.224 [ComponentRegistry](DEBUG): Component "controlThread" handled in its own thread.
2015-09-29T12:00:33.226Z,1443528033.226 [controlThread ThreadHandler](DEBUG): Created PCaller Thread at 4037C4E0
2015-09-29T12:00:33.226Z,1443528033.226 [controlThread ThreadHandler](INFO): Protected caller Thread ID is 762
2015-09-29T12:00:33.229Z,1443528033.229 [ComponentRegistry](DEBUG): SyncComponent "CycleStarter" handled in the control thread.
2015-09-29T12:00:33.242Z,1443528033.242 [ComponentRegistry](DEBUG): Component "CommandLine" handled in its own thread.
2015-09-29T12:00:33.246Z,1443528033.246 [CommandLine ThreadHandler](DEBUG): Created PCaller Thread at 403AC4E0
2015-09-29T12:00:33.246Z,1443528033.246 [CommandLine ThreadHandler](INFO): Protected caller Thread ID is 763
2015-09-29T12:00:33.247Z,1443528033.247 [ComponentRegistry](DEBUG): Component "logger" handled in its own thread.
2015-09-29T12:00:33.250Z,1443528033.250 [logger ThreadHandler](DEBUG): Created PCaller Thread at 403DC4E0
2015-09-29T12:00:33.250Z,1443528033.250 [logger ThreadHandler](INFO): Protected caller Thread ID is 764
2015-09-29T12:00:33.252Z,1443528033.252 [ComponentRegistry](DEBUG): SyncComponent "LogSplitter" handled in the control thread.
2015-09-29T12:00:33.253Z,1443528033.253 [Supervisor](INFO): Looking for Config files in directory: Config/
2015-09-29T12:00:33.256Z,1443528033.256 [Supervisor](INFO): Opening Config file at: Config/Control.cfg
2015-09-29T12:00:33.672Z,1443528033.672 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Control
2015-09-29T12:00:33.674Z,1443528033.674 [Supervisor](INFO): Opening Config file at: Config/BIT.cfg
2015-09-29T12:00:33.874Z,1443528033.874 [ComponentRegistry](DEBUG): Loaded Config Component "Config/BIT
2015-09-29T12:00:33.876Z,1443528033.876 [Supervisor](INFO): Opening Config file at: Config/Derivation.cfg
2015-09-29T12:00:34.025Z,1443528034.025 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Derivation
2015-09-29T12:00:34.026Z,1443528034.026 [Supervisor](INFO): Opening Config file at: Config/Estimation.cfg
2015-09-29T12:00:34.179Z,1443528034.179 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Estimation
2015-09-29T12:00:34.180Z,1443528034.180 [Supervisor](INFO): Opening Config file at: Config/Guidance.cfg
2015-09-29T12:00:34.278Z,1443528034.278 [Supervisor](INFO): Opening Config file at: Config/Navigation.cfg
2015-09-29T12:00:34.506Z,1443528034.506 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Navigation
2015-09-29T12:00:34.507Z,1443528034.507 [Supervisor](INFO): Opening Config file at: Config/Sample.cfg
2015-09-29T12:00:34.606Z,1443528034.606 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Sample
2015-09-29T12:00:34.607Z,1443528034.607 [Supervisor](INFO): Opening Config file at: Config/Science.cfg
2015-09-29T12:00:34.939Z,1443528034.939 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Science
2015-09-29T12:00:34.940Z,1443528034.940 [Supervisor](INFO): Opening Config file at: Config/Sensor.cfg
2015-09-29T12:00:35.359Z,1443528035.359 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Sensor
2015-09-29T12:00:35.360Z,1443528035.360 [Supervisor](INFO): Opening Config file at: Config/Servo.cfg
2015-09-29T12:00:35.730Z,1443528035.730 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Servo
2015-09-29T12:00:35.731Z,1443528035.731 [Supervisor](INFO): Opening Config file at: Config/Simulator.cfg
2015-09-29T12:00:36.363Z,1443528036.363 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Simulator
2015-09-29T12:00:36.364Z,1443528036.364 [Supervisor](INFO): Opening Config file at: Config/logger.cfg
2015-09-29T12:00:36.609Z,1443528036.609 [ComponentRegistry](DEBUG): Loaded Config Component "Config/logger
2015-09-29T12:00:36.610Z,1443528036.610 [Supervisor](INFO): Opening Config file at: Config/secure.cfg
2015-09-29T12:00:36.754Z,1443528036.754 [ComponentRegistry](DEBUG): Loaded Config Component "Config/secure
2015-09-29T12:00:36.755Z,1443528036.755 [Supervisor](INFO): Opening Config file at: Config/vehicle.cfg
2015-09-29T12:00:37.295Z,1443528037.295 [ComponentRegistry](DEBUG): Loaded Config Component "Config/vehicle
2015-09-29T12:00:37.296Z,1443528037.296 [Supervisor](INFO): Opening Config file at: Config/workSite.cfg
2015-09-29T12:00:37.421Z,1443528037.421 [ComponentRegistry](DEBUG): Loaded Config Component "Config/workSite
2015-09-29T12:00:37.423Z,1443528037.423 [Supervisor](INFO): Looking for Config files in directory: Config/(none)/
2015-09-29T12:00:37.423Z,1443528037.423 [Supervisor](FAULT): Ignoring configuration overrides from Data/persisted.cfg
2015-09-29T12:00:37.428Z,1443528037.428 [Module Loader](DEBUG): Loading Module at Modules/Control.so
2015-09-29T12:00:37.505Z,1443528037.505 [VerticalControl](DEBUG): Construct VerticalControl.
2015-09-29T12:00:37.648Z,1443528037.648 [VerticalControl] Loaded
2015-09-29T12:00:37.649Z,1443528037.649 [ComponentRegistry](DEBUG): SyncComponent "VerticalControl" handled in the control thread.
2015-09-29T12:00:37.649Z,1443528037.649 [HorizontalControl](DEBUG): Construct HorizontalControl.
2015-09-29T12:00:37.740Z,1443528037.740 [HorizontalControl] Loaded
2015-09-29T12:00:37.740Z,1443528037.740 [ComponentRegistry](DEBUG): SyncComponent "HorizontalControl" handled in the control thread.
2015-09-29T12:00:37.741Z,1443528037.741 [SpeedControl](DEBUG): Construct SpeedControl.
2015-09-29T12:00:37.747Z,1443528037.747 [SpeedControl] Loaded
2015-09-29T12:00:37.747Z,1443528037.747 [ComponentRegistry](DEBUG): SyncComponent "SpeedControl" handled in the control thread.
2015-09-29T12:00:37.748Z,1443528037.748 [LoopControl](DEBUG): Construct LoopControl.
2015-09-29T12:00:37.748Z,1443528037.748 [LoopControl] Loaded
2015-09-29T12:00:37.749Z,1443528037.749 [ComponentRegistry](DEBUG): SyncComponent "LoopControl" handled in the control thread.
2015-09-29T12:00:37.749Z,1443528037.749 [Module Loader](DEBUG): Loaded Module: Control (Contains the Control components, such as Depth, Heading, and Speed Control)
2015-09-29T12:00:37.750Z,1443528037.750 [Module Loader](DEBUG): Loading Module at Modules/BIT.so
2015-09-29T12:00:37.925Z,1443528037.925 [SBIT](DEBUG): Construct Startup Built In Test.
2015-09-29T12:00:37.938Z,1443528037.938 [SBIT] Loaded
2015-09-29T12:00:37.939Z,1443528037.939 [ComponentRegistry](DEBUG): SyncComponent "SBIT" handled in the control thread.
2015-09-29T12:00:37.939Z,1443528037.939 [IBIT](DEBUG): Construct Initiated Built In Test.
2015-09-29T12:00:37.975Z,1443528037.975 [IBIT] Loaded
2015-09-29T12:00:37.975Z,1443528037.975 [ComponentRegistry](DEBUG): SyncComponent "IBIT" handled in the control thread.
2015-09-29T12:00:37.978Z,1443528037.978 [CBIT](DEBUG): Construct Continuous Built In Test.
2015-09-29T12:00:38.143Z,1443528038.143 [CBIT] Loaded
2015-09-29T12:00:38.143Z,1443528038.143 [ComponentRegistry](DEBUG): SyncComponent "CBIT" handled in the control thread.
2015-09-29T12:00:38.144Z,1443528038.144 [Module Loader](DEBUG): Loaded Module: BIT (Contains the BuiltInTest components, such as C Built In Test)
2015-09-29T12:00:38.144Z,1443528038.144 [Module Loader](DEBUG): Loading Module at Modules/Derivation.so
2015-09-29T12:00:38.187Z,1443528038.187 [DepthRateCalculator] Loaded
2015-09-29T12:00:38.187Z,1443528038.187 [ComponentRegistry](DEBUG): SyncComponent "DepthRateCalculator" handled in the control thread.
2015-09-29T12:00:38.193Z,1443528038.193 [PitchRateCalculator] Loaded
2015-09-29T12:00:38.193Z,1443528038.193 [ComponentRegistry](DEBUG): SyncComponent "PitchRateCalculator" handled in the control thread.
2015-09-29T12:00:38.210Z,1443528038.210 [SpeedCalculator] Loaded
2015-09-29T12:00:38.210Z,1443528038.210 [ComponentRegistry](DEBUG): SyncComponent "SpeedCalculator" handled in the control thread.
2015-09-29T12:00:38.228Z,1443528038.228 [TempGradientCalculator] Loaded
2015-09-29T12:00:38.229Z,1443528038.229 [ComponentRegistry](DEBUG): SyncComponent "TempGradientCalculator" handled in the control thread.
2015-09-29T12:00:38.251Z,1443528038.251 [VerticalTemperatureHomogeneityIndexCalculator] Loaded
2015-09-29T12:00:38.252Z,1443528038.252 [ComponentRegistry](DEBUG): SyncComponent "VerticalTemperatureHomogeneityIndexCalculator" handled in the control thread.
2015-09-29T12:00:38.257Z,1443528038.257 [YawRateCalculator] Loaded
2015-09-29T12:00:38.258Z,1443528038.258 [ComponentRegistry](DEBUG): SyncComponent "YawRateCalculator" handled in the control thread.
2015-09-29T12:00:38.258Z,1443528038.258 [Module Loader](DEBUG): Loaded Module: Derivation (Contains the base derivation components)
2015-09-29T12:00:38.259Z,1443528038.259 [Module Loader](DEBUG): Loading Module at Modules/Estimation.so
2015-09-29T12:00:38.384Z,1443528038.384 [StratificationFrontDetector](INFO): threshold set to: 0.399988 degC
2015-09-29T12:00:38.385Z,1443528038.385 [StratificationFrontDetector](DEBUG): (re)initializing
2015-09-29T12:00:38.385Z,1443528038.385 [StratificationFrontDetector] Loaded
2015-09-29T12:00:38.385Z,1443528038.385 [ComponentRegistry](DEBUG): SyncComponent "StratificationFrontDetector" handled in the control thread.
2015-09-29T12:00:38.386Z,1443528038.386 [Module Loader](DEBUG): Loaded Module: Estimation (Contains the base estimation components)
2015-09-29T12:00:38.386Z,1443528038.386 [Module Loader](DEBUG): Loading Module at Modules/Guidance.so
2015-09-29T12:00:38.695Z,1443528038.695 [Module Loader](DEBUG): Loaded Module: Guidance (Contains behaviors and commands)
2015-09-29T12:00:38.696Z,1443528038.696 [Module Loader](DEBUG): Loading Module at Modules/Navigation.so
2015-09-29T12:00:38.835Z,1443528038.835 [DeadReckonUsingMultipleVelocitySources] Loaded
2015-09-29T12:00:38.836Z,1443528038.836 [ComponentRegistry](DEBUG): SyncComponent "DeadReckonUsingMultipleVelocitySources" handled in the control thread.
2015-09-29T12:00:38.900Z,1443528038.900 [DeadReckonUsingSpeedCalculator] Loaded
2015-09-29T12:00:38.900Z,1443528038.900 [ComponentRegistry](DEBUG): SyncComponent "DeadReckonUsingSpeedCalculator" handled in the control thread.
2015-09-29T12:00:38.924Z,1443528038.924 [NavChart] Loaded
2015-09-29T12:00:38.924Z,1443528038.924 [ComponentRegistry](DEBUG): SyncComponent "NavChart" handled in the control thread.
2015-09-29T12:00:38.929Z,1443528038.929 [UniversalFixResidualReporter] Loaded
2015-09-29T12:00:38.930Z,1443528038.930 [ComponentRegistry](DEBUG): SyncComponent "UniversalFixResidualReporter" handled in the control thread.
2015-09-29T12:00:38.930Z,1443528038.930 [Module Loader](DEBUG): Loaded Module: Navigation (Contains the base navigation components)
2015-09-29T12:00:38.931Z,1443528038.931 [Module Loader](DEBUG): Loading Module at Modules/Sample.so
2015-09-29T12:00:38.939Z,1443528038.939 [Module Loader](DEBUG): Loaded Module: Sample (This is a Sample Module of Sample Components)
2015-09-29T12:00:38.940Z,1443528038.940 [Module Loader](DEBUG): Loading Module at Modules/Science.so
2015-09-29T12:00:39.257Z,1443528039.257 [CTD_NeilBrown] Loaded
2015-09-29T12:00:39.257Z,1443528039.257 [ComponentRegistry](DEBUG): Component "CTD_NeilBrown" handled in its own thread.
2015-09-29T12:00:39.262Z,1443528039.262 [CTD_NeilBrown ThreadHandler](DEBUG): Created PCaller Thread at 4059D4E0
2015-09-29T12:00:39.262Z,1443528039.262 [CTD_NeilBrown ThreadHandler](INFO): Protected caller Thread ID is 810
2015-09-29T12:00:39.276Z,1443528039.276 [ISUS] Loaded
2015-09-29T12:00:39.276Z,1443528039.276 [ComponentRegistry](DEBUG): SyncComponent "ISUS" handled in the control thread.
2015-09-29T12:00:39.296Z,1443528039.296 [PAR_Licor] Loaded
2015-09-29T12:00:39.296Z,1443528039.296 [ComponentRegistry](DEBUG): SyncComponent "PAR_Licor" handled in the control thread.
2015-09-29T12:00:39.356Z,1443528039.356 [WetLabsBB2FL] Loaded
2015-09-29T12:00:39.357Z,1443528039.357 [ComponentRegistry](DEBUG): Component "WetLabsBB2FL" handled in its own thread.
2015-09-29T12:00:39.362Z,1443528039.362 [WetLabsBB2FL ThreadHandler](DEBUG): Created PCaller Thread at 405CD4E0
2015-09-29T12:00:39.362Z,1443528039.362 [WetLabsBB2FL ThreadHandler](INFO): Protected caller Thread ID is 811
2015-09-29T12:00:39.363Z,1443528039.363 [Module Loader](DEBUG): Loaded Module: Science (Contains the science components)
2015-09-29T12:00:39.363Z,1443528039.363 [Module Loader](DEBUG): Loading Module at Modules/Sensor.so
2015-09-29T12:00:40.114Z,1443528040.114 [AHRS_sp3003D] Loaded
2015-09-29T12:00:40.114Z,1443528040.114 [ComponentRegistry](DEBUG): SyncComponent "AHRS_sp3003D" handled in the control thread.
2015-09-29T12:00:40.312Z,1443528040.312 [DataOverHttps] Loaded
2015-09-29T12:00:40.312Z,1443528040.312 [ComponentRegistry](DEBUG): SyncComponent "DataOverHttps" handled in the control thread.
2015-09-29T12:00:40.326Z,1443528040.326 [Depth_Keller] Loaded
2015-09-29T12:00:40.327Z,1443528040.327 [ComponentRegistry](DEBUG): SyncComponent "Depth_Keller" handled in the control thread.
2015-09-29T12:00:40.332Z,1443528040.332 [DropWeight] Loaded
2015-09-29T12:00:40.332Z,1443528040.332 [ComponentRegistry](DEBUG): SyncComponent "DropWeight" handled in the control thread.
2015-09-29T12:00:40.495Z,1443528040.495 [DVL_micro] Loaded
2015-09-29T12:00:40.495Z,1443528040.495 [ComponentRegistry](DEBUG): SyncComponent "DVL_micro" handled in the control thread.
2015-09-29T12:00:40.598Z,1443528040.598 [NAL9602] Loaded
2015-09-29T12:00:40.598Z,1443528040.598 [ComponentRegistry](DEBUG): SyncComponent "NAL9602" handled in the control thread.
2015-09-29T12:00:40.644Z,1443528040.644 [Onboard] Loaded
2015-09-29T12:00:40.644Z,1443528040.644 [ComponentRegistry](DEBUG): SyncComponent "Onboard" handled in the control thread.
2015-09-29T12:00:40.657Z,1443528040.657 [Radio_Surface] Loaded
2015-09-29T12:00:40.657Z,1443528040.657 [ComponentRegistry](DEBUG): Component "Radio_Surface" handled in its own thread.
2015-09-29T12:00:40.658Z,1443528040.658 [Radio_Surface ThreadHandler](DEBUG): Created PCaller Thread at 408114E0
2015-09-29T12:00:40.659Z,1443528040.659 [Radio_Surface ThreadHandler](INFO): Protected caller Thread ID is 812
2015-09-29T12:00:40.812Z,1443528040.812 [DAT] Loaded
2015-09-29T12:00:40.812Z,1443528040.812 [ComponentRegistry](DEBUG): SyncComponent "DAT" handled in the control thread.
2015-09-29T12:00:40.819Z,1443528040.819 [SCPI] Loaded
2015-09-29T12:00:40.819Z,1443528040.819 [ComponentRegistry](DEBUG): SyncComponent "SCPI" handled in the control thread.
2015-09-29T12:00:40.820Z,1443528040.820 [Module Loader](DEBUG): Loaded Module: Sensor (Contains the sensor components)
2015-09-29T12:00:40.821Z,1443528040.821 [Module Loader](DEBUG): Loading Module at Modules/Servo.so
2015-09-29T12:00:40.948Z,1443528040.948 [BuoyancyServo] Loaded
2015-09-29T12:00:40.949Z,1443528040.949 [ComponentRegistry](DEBUG): SyncComponent "BuoyancyServo" handled in the control thread.
2015-09-29T12:00:40.962Z,1443528040.962 [ElevatorServo] Loaded
2015-09-29T12:00:40.963Z,1443528040.963 [ComponentRegistry](DEBUG): SyncComponent "ElevatorServo" handled in the control thread.
2015-09-29T12:00:40.975Z,1443528040.975 [MassServo] Loaded
2015-09-29T12:00:40.976Z,1443528040.976 [ComponentRegistry](DEBUG): SyncComponent "MassServo" handled in the control thread.
2015-09-29T12:00:40.988Z,1443528040.988 [RudderServo] Loaded
2015-09-29T12:00:40.989Z,1443528040.989 [ComponentRegistry](DEBUG): SyncComponent "RudderServo" handled in the control thread.
2015-09-29T12:00:41.001Z,1443528041.001 [ThrusterServo] Loaded
2015-09-29T12:00:41.001Z,1443528041.001 [ComponentRegistry](DEBUG): SyncComponent "ThrusterServo" handled in the control thread.
2015-09-29T12:00:41.001Z,1443528041.001 [Module Loader](DEBUG): Loaded Module: Servo (This is the module containing motor controllers)
2015-09-29T12:00:41.002Z,1443528041.002 [Module Loader](DEBUG): Loading Module at Modules/Simulator.so
2015-09-29T12:00:41.196Z,1443528041.196 [InternalSim] Loaded
2015-09-29T12:00:41.196Z,1443528041.196 [ComponentRegistry](DEBUG): SyncComponent "InternalSim" handled in the control thread.
2015-09-29T12:00:41.196Z,1443528041.196 [Module Loader](DEBUG): Loaded Module: Simulator (This is the module containing the Simulator)
2015-09-29T12:00:41.197Z,1443528041.197 [Module Loader](DEBUG): Loading Module at Modules/Trigger.so
2015-09-29T12:00:41.237Z,1443528041.237 [Module Loader](DEBUG): Loaded Module: Trigger (Contains triggers for use in missions)
2015-09-29T12:00:41.242Z,1443528041.242 [ComponentRegistry](DEBUG): SyncComponent "MissionManager" handled in the control thread.
2015-09-29T12:00:41.243Z,1443528041.243 [ComponentRegistry](DEBUG): SyncComponent "Reporter" handled in the control thread.
2015-09-29T12:00:41.249Z,1443528041.249 [ComponentRegistry](DEBUG): Component "NavChartDb" handled in its own thread.
2015-09-29T12:00:41.250Z,1443528041.250 [NavChartDb ThreadHandler](DEBUG): Created PCaller Thread at 408BF4E0
2015-09-29T12:00:41.251Z,1443528041.251 [NavChartDb ThreadHandler](INFO): Protected caller Thread ID is 813
2015-09-29T12:00:41.256Z,1443528041.256 [Supervisor](INFO): Main Thread ID is 760
2015-09-29T12:00:41.256Z,1443528041.256 [Supervisor](DEBUG): Running supervisor.
2015-09-29T12:00:41.256Z,1443528041.256 [CommandLine ThreadHandler](INFO): Handler Thread ID is 814
2015-09-29T12:00:41.259Z,1443528041.259 [controlThread ThreadHandler](INFO): Handler Thread ID is 815
2015-09-29T12:00:41.260Z,1443528041.260 [controlThread](DEBUG): Initializing ControlThread
2015-09-29T12:00:41.261Z,1443528041.261 [VerticalControl](DEBUG): Initialize VerticalControlComponent.
2015-09-29T12:00:41.263Z,1443528041.263 [HorizontalControl](DEBUG): Initialize HorizontalControlComponent.
2015-09-29T12:00:41.263Z,1443528041.263 [SpeedControl](DEBUG): Initialize SpeedControlComponent.
2015-09-29T12:00:41.264Z,1443528041.264 [LoopControl](DEBUG): Initialize LoopControlComponent.
2015-09-29T12:00:41.264Z,1443528041.264 [SBIT](INFO): Initialize SBIT Component.
2015-09-29T12:00:41.265Z,1443528041.265 [SBIT](IMPORTANT): Tethys CM Info: SVN revision:12634
2015-09-29T12:00:41.266Z,1443528041.266 [SBIT](INFO): Kernel Reporting Different Release From Configuration.
Kernel Expected: 2.6.32-45-generic-pae
Kernel Reported: 2.6.27.8
2015-09-29T12:00:41.267Z,1443528041.267 [SBIT](INFO): Kernel Reporting Different Version From Configuration.
Kernel Expected: #102-Ubuntu SMP Wed Jan 2 22:10:16 UTC 2013
Kernel Reported: #641 PREEMPT Mon Sep 28 16:45:10 PDT 2015
2015-09-29T12:00:41.267Z,1443528041.267 [SBIT](INFO): Beginning SBIT in 20.000000 seconds.
2015-09-29T12:00:41.268Z,1443528041.268 [IBIT](INFO): Initialize IBIT Component.
2015-09-29T12:00:41.269Z,1443528041.269 [CBIT](DEBUG): Initialize CBIT Component.
2015-09-29T12:00:41.269Z,1443528041.269 [CBIT](FAULT): LAST RESTART WAS UNINTENTIONAL.
2015-09-29T12:00:41.269Z,1443528041.269 [CBIT](INFO): Last reboot was NOT due to watchdog timer.
2015-09-29T12:00:41.270Z,1443528041.270 [DepthRateCalculator](DEBUG): Initializing DepthRateCalculator.
2015-09-29T12:00:41.270Z,1443528041.270 [PitchRateCalculator](DEBUG): Initializing PitchRateCalculator.
2015-09-29T12:00:41.270Z,1443528041.270 [SpeedCalculator](DEBUG): Initializing SpeedCalculator.
2015-09-29T12:00:41.270Z,1443528041.270 [TempGradientCalculator](DEBUG): Initializing TempGradientCalculator.
2015-09-29T12:00:41.271Z,1443528041.271 [VerticalTemperatureHomogeneityIndexCalculator](DEBUG): (re)initializing
2015-09-29T12:00:41.272Z,1443528041.272 [YawRateCalculator](DEBUG): Initializing YawRateCalculator.
2015-09-29T12:00:41.272Z,1443528041.272 [DeadReckonUsingMultipleVelocitySources](DEBUG): Initializing DeadReckonUsingMultipleVelocitySources component.
2015-09-29T12:00:41.273Z,1443528041.273 [DeadReckonUsingMultipleVelocitySources](INFO): Will consider orientation measurement stale after 120s.
2015-09-29T12:00:41.273Z,1443528041.273 [DeadReckonUsingMultipleVelocitySources](INFO): Will consider velocity measurement stale after 20s.
2015-09-29T12:00:41.274Z,1443528041.274 [DeadReckonUsingSpeedCalculator](DEBUG): Initializing DeadReckonUsingSpeedCalculator component.
2015-09-29T12:00:41.274Z,1443528041.274 [DeadReckonUsingSpeedCalculator](INFO): Will consider orientation measurement stale after 120s.
2015-09-29T12:00:41.274Z,1443528041.274 [DeadReckonUsingSpeedCalculator](INFO): Will consider velocity measurement stale after 20s.
2015-09-29T12:00:41.275Z,1443528041.275 [NavChart](DEBUG): Initialize NavChart Navigation.
2015-09-29T12:00:41.275Z,1443528041.275 [UniversalFixResidualReporter](DEBUG): Initializing UniversalFixResidualReporter component.
2015-09-29T12:00:41.280Z,1443528041.280 [InternalSim](DEBUG):  InternalSim initializing...
2015-09-29T12:00:41.298Z,1443528041.298 [logger ThreadHandler](INFO): Handler Thread ID is 816
2015-09-29T12:00:41.338Z,1443528041.338 [CTD_NeilBrown ThreadHandler](INFO): Handler Thread ID is 817
2015-09-29T12:00:41.394Z,1443528041.394 [WetLabsBB2FL ThreadHandler](INFO): Handler Thread ID is 818
2015-09-29T12:00:41.403Z,1443528041.403 [Radio_Surface ThreadHandler](INFO): Handler Thread ID is 819
2015-09-29T12:00:41.459Z,1443528041.459 [NavChartDb ThreadHandler](INFO): Handler Thread ID is 820
2015-09-29T12:00:41.471Z,1443528041.471 [NavChartDb](INFO): Looking for Electronic Nav Chart files in directory: Resources
2015-09-29T12:00:41.472Z,1443528041.472 [MissionManager](INFO): Loading Mission: Missions/Startup.xml
2015-09-29T12:00:41.473Z,1443528041.473 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US1WC07M.000
2015-09-29T12:00:41.474Z,1443528041.474 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US2WC11M.000
2015-09-29T12:00:41.474Z,1443528041.474 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US3CA52M.000
2015-09-29T12:00:41.474Z,1443528041.474 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US4CA60M.000
2015-09-29T12:00:41.474Z,1443528041.474 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA50M.000
2015-09-29T12:00:41.475Z,1443528041.475 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA61M.000
2015-09-29T12:00:41.475Z,1443528041.475 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA62M.000
2015-09-29T12:00:41.475Z,1443528041.475 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA83M.000
2015-09-29T12:00:41.559Z,1443528041.559 [Startup:A.GoToSurface](DEBUG): Construct GoToSurface.
2015-09-29T12:00:41.585Z,1443528041.585 [MissionManager](DEBUG): 
<?xml version="1.0" encoding="UTF-8"?>
<Mission xmlns="Tethys"
       xmlns:Control="Tethys/Control"
       xmlns:Guidance="Tethys/Guidance" 
       xmlns:Units="Tethys/Units"
       xmlns:Universal="Tethys/Universal"
       xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
       xsi:schemaLocation="Tethys http://okeanids.mbari.org/tethys/Xml/Tethys.xsd
                           Tethys/Control http://okeanids.mbari.org/tethys/Xml/Control.xsd
                           Tethys/Guidance http://okeanids.mbari.org/tethys/Xml/Guidance.xsd
                           Tethys/Units http://okeanids.mbari.org/tethys/Xml/Units.xsd
                           Tethys/Universal http://okeanids.mbari.org/tethys/Xml/Universal.xsd"
       Id="Startup">

    <Guidance:GoToSurface>
        <Progression/>
    </Guidance:GoToSurface>

    <Aggregate Id="StartupSatComms">

        <Sequence/>

        <ReadDatum>
            <Timeout Duration="P1M" />
            <Universal:latitude_fix/>
        </ReadDatum>

        <ReadDatum>
            <Timeout Duration="P1M" />
            <Universal:platform_communications/>
        </ReadDatum>

    </Aggregate>

</Mission>


2015-09-29T12:00:41.586Z,1443528041.586 [MissionManager](INFO): Loading Mission: Missions/Default.xml
2015-09-29T12:00:41.653Z,1443528041.653 [MissionManager](INFO): DefineArg Default.ElapsedSinceDefaultStarted = 0.000000 min
2015-09-29T12:00:41.654Z,1443528041.654 [Default:A.GoToSurface](DEBUG): Construct GoToSurface.
2015-09-29T12:00:41.724Z,1443528041.724 [Default:CheckIn:Read_Iridium:A_Timeout:A.Execute](DEBUG): Construct Execute.
2015-09-29T12:00:41.727Z,1443528041.727 [Default:CheckIn:C.Wait](DEBUG): Construct Wait.
2015-09-29T12:00:41.749Z,1443528041.749 [Default:D.Execute](DEBUG): Construct Execute.
2015-09-29T12:00:41.756Z,1443528041.756 [MissionManager](DEBUG): 
<?xml version="1.0" encoding="UTF-8"?>
<Mission xmlns="Tethys"
xmlns:Guidance="Tethys/Guidance"
xmlns:Units="Tethys/Units"
xmlns:Universal="Tethys/Universal"
xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
xsi:schemaLocation="Tethys http://okeanids.mbari.org/tethys/Xml/Tethys.xsd
Tethys/Guidance http://okeanids.mbari.org/tethys/Xml/Guidance.xsd
Tethys/Units http://okeanids.mbari.org/tethys/Xml/Units.xsd
Tethys/Universal http://okeanids.mbari.org/tethys/Xml/Universal.xsd"
Id="Default">

    <DefineArg Name="ElapsedSinceDefaultStarted"><Units:minute/><Value>0</Value></DefineArg>

    <Guidance:GoToSurface>
        <Progression/>
    </Guidance:GoToSurface>

    <Aggregate Id="CheckIn">

        <Sequence Repeat="288"/>

        <ReadDatum Id="Read_GPS">
            <Sequence/>
            <Timeout Duration="P5M"/>
            <Universal:time_fix/>
        </ReadDatum>

        <ReadDatum Id="Read_Iridium">
            <Sequence/>
            <Timeout Duration="P2H">
                <Guidance:Execute>
                    <Sequence/>
                    <Setting><Guidance:Execute.command/><String>Burn 300</String></Setting>
                </Guidance:Execute>
                <Syslog Severity="Critical">Dropped weight due to communications timeout.</Syslog>
            </Timeout>
            <Universal:platform_communications/>
        </ReadDatum>

        <Guidance:Wait>
            <Sequence/>
            <Setting><Guidance:Wait.duration/><Units:minute/><Value>5</Value></Setting>
        </Guidance:Wait>

        <Assign><Sequence/><Arg Name="ElapsedSinceDefaultStarted"/><Elapsed><Universal:mission_started/></Elapsed></Assign>

        <Syslog Severity="Important">Default mission has been running for <Arg Name="ElapsedSinceDefaultStarted"/><Units:minute/></Syslog>

    </Aggregate>

    <Syslog Severity="Important">Restarting logs and Default mission.</Syslog>

    <Guidance:Execute>
        <Sequence/>
        <Setting><Guidance:Execute.command/><String>restart logs</String></Setting>
    </Guidance:Execute>

</Mission>


2015-09-29T12:00:41.763Z,1443528041.763 [controlThread](DEBUG): Component order: CycleStarter,InternalSim,ISUS,PAR_Licor,AHRS_sp3003D,DataOverHttps,Depth_Keller,DropWeight,DVL_micro,NAL9602,Onboard,DAT,SCPI,PAR_Licor,Depth_Keller,DepthRateCalculator,PitchRateCalculator,SpeedCalculator,TempGradientCalculator,VerticalTemperatureHomogeneityIndexCalculator,YawRateCalculator,StratificationFrontDetector,DeadReckonUsingMultipleVelocitySources,DeadReckonUsingSpeedCalculator,NavChart,UniversalFixResidualReporter,MissionManager,VerticalControl,HorizontalControl,SpeedControl,LoopControl,BuoyancyServo,ElevatorServo,MassServo,RudderServo,ThrusterServo,SBIT,IBIT,CBIT,Reporter,LogSplitter,
2015-09-29T12:00:41.982Z,1443528041.982 [DVL_micro](INFO): Initializing
2015-09-29T12:00:42.135Z,1443528042.135 [DeadReckonUsingMultipleVelocitySources](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T12:00:42.158Z,1443528042.158 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T12:00:42.279Z,1443528042.279 [BuoyancyServo](DEBUG): Initializing BuoyancyServo.
2015-09-29T12:00:42.286Z,1443528042.286 [ElevatorServo](DEBUG): Initializing ElevatorServo.
2015-09-29T12:00:42.310Z,1443528042.310 [MassServo](DEBUG): Initializing MassServo.
2015-09-29T12:00:42.316Z,1443528042.316 [RudderServo](DEBUG): Initializing RudderServo.
2015-09-29T12:00:42.334Z,1443528042.334 [ThrusterServo](DEBUG): Initializing ThrusterServo.
2015-09-29T12:00:42.568Z,1443528042.568 [DeadReckonUsingMultipleVelocitySources](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T12:00:42.569Z,1443528042.569 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T12:00:51.461Z,1443528051.461 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T12:00:51.788Z,1443528051.788 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T12:00:51.922Z,1443528051.922 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T12:00:52.322Z,1443528052.322 [DataOverHttps](INFO): setting available, lastComms_.elapsed()=0.004000
2015-09-29T12:00:52.325Z,1443528052.325 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T12:00:52.724Z,1443528052.724 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T12:00:53.119Z,1443528053.119 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T12:00:53.519Z,1443528053.519 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T12:00:53.922Z,1443528053.922 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T12:00:54.319Z,1443528054.319 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T12:00:54.718Z,1443528054.718 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T12:00:55.122Z,1443528055.122 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T12:00:55.521Z,1443528055.521 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T12:00:55.921Z,1443528055.921 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T12:00:56.321Z,1443528056.321 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T12:00:56.720Z,1443528056.720 [NAL9602](INFO): No messages in MT queue
2015-09-29T12:00:56.721Z,1443528056.721 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T12:00:57.134Z,1443528057.134 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T12:00:57.521Z,1443528057.521 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T12:00:57.921Z,1443528057.921 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T12:00:58.322Z,1443528058.322 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T12:00:58.721Z,1443528058.721 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T12:00:59.121Z,1443528059.121 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T12:00:59.524Z,1443528059.524 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T12:00:59.921Z,1443528059.921 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T12:01:00.320Z,1443528060.320 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T12:01:00.729Z,1443528060.729 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T12:01:01.128Z,1443528061.128 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T12:01:01.528Z,1443528061.528 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T12:01:01.918Z,1443528061.918 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T12:01:01.940Z,1443528061.940 [SBIT](IMPORTANT): Beginning Startup BIT
2015-09-29T12:01:02.332Z,1443528062.332 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T12:01:02.718Z,1443528062.718 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T12:01:03.119Z,1443528063.119 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T12:01:03.520Z,1443528063.520 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T12:01:03.919Z,1443528063.919 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T12:01:04.319Z,1443528064.319 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T12:01:04.719Z,1443528064.719 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T12:01:05.119Z,1443528065.119 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T12:01:05.519Z,1443528065.519 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T12:01:05.919Z,1443528065.919 [D