2015-09-29T11:44:42.053Z,1443527082.053 [Supervisor](DEBUG): Initializing supervisor.
2015-09-29T11:44:42.056Z,1443527082.056 [SyncHandler](DEBUG): Created PCaller Thread at 4034C4E0
2015-09-29T11:44:42.057Z,1443527082.057 [SyncHandler](INFO): Protected caller Thread ID is 761
2015-09-29T11:44:42.057Z,1443527082.057 [ComponentRegistry](DEBUG): Component "controlThread" handled in its own thread.
2015-09-29T11:44:42.059Z,1443527082.059 [controlThread ThreadHandler](DEBUG): Created PCaller Thread at 4037C4E0
2015-09-29T11:44:42.060Z,1443527082.060 [controlThread ThreadHandler](INFO): Protected caller Thread ID is 762
2015-09-29T11:44:42.062Z,1443527082.062 [ComponentRegistry](DEBUG): SyncComponent "CycleStarter" handled in the control thread.
2015-09-29T11:44:42.075Z,1443527082.075 [ComponentRegistry](DEBUG): Component "CommandLine" handled in its own thread.
2015-09-29T11:44:42.079Z,1443527082.079 [CommandLine ThreadHandler](DEBUG): Created PCaller Thread at 403AC4E0
2015-09-29T11:44:42.080Z,1443527082.080 [CommandLine ThreadHandler](INFO): Protected caller Thread ID is 763
2015-09-29T11:44:42.080Z,1443527082.080 [ComponentRegistry](DEBUG): Component "logger" handled in its own thread.
2015-09-29T11:44:42.083Z,1443527082.083 [logger ThreadHandler](DEBUG): Created PCaller Thread at 403DC4E0
2015-09-29T11:44:42.084Z,1443527082.084 [logger ThreadHandler](INFO): Protected caller Thread ID is 764
2015-09-29T11:44:42.086Z,1443527082.086 [ComponentRegistry](DEBUG): SyncComponent "LogSplitter" handled in the control thread.
2015-09-29T11:44:42.086Z,1443527082.086 [Supervisor](INFO): Looking for Config files in directory: Config/
2015-09-29T11:44:42.090Z,1443527082.090 [Supervisor](INFO): Opening Config file at: Config/Control.cfg
2015-09-29T11:44:42.494Z,1443527082.494 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Control
2015-09-29T11:44:42.496Z,1443527082.496 [Supervisor](INFO): Opening Config file at: Config/BIT.cfg
2015-09-29T11:44:42.688Z,1443527082.688 [ComponentRegistry](DEBUG): Loaded Config Component "Config/BIT
2015-09-29T11:44:42.690Z,1443527082.690 [Supervisor](INFO): Opening Config file at: Config/Derivation.cfg
2015-09-29T11:44:42.836Z,1443527082.836 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Derivation
2015-09-29T11:44:42.837Z,1443527082.837 [Supervisor](INFO): Opening Config file at: Config/Estimation.cfg
2015-09-29T11:44:42.988Z,1443527082.988 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Estimation
2015-09-29T11:44:42.989Z,1443527082.989 [Supervisor](INFO): Opening Config file at: Config/Guidance.cfg
2015-09-29T11:44:43.084Z,1443527083.084 [Supervisor](INFO): Opening Config file at: Config/Navigation.cfg
2015-09-29T11:44:43.308Z,1443527083.308 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Navigation
2015-09-29T11:44:43.309Z,1443527083.309 [Supervisor](INFO): Opening Config file at: Config/Sample.cfg
2015-09-29T11:44:43.404Z,1443527083.404 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Sample
2015-09-29T11:44:43.404Z,1443527083.404 [Supervisor](INFO): Opening Config file at: Config/Science.cfg
2015-09-29T11:44:43.724Z,1443527083.724 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Science
2015-09-29T11:44:43.725Z,1443527083.725 [Supervisor](INFO): Opening Config file at: Config/Sensor.cfg
2015-09-29T11:44:44.128Z,1443527084.128 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Sensor
2015-09-29T11:44:44.129Z,1443527084.129 [Supervisor](INFO): Opening Config file at: Config/Servo.cfg
2015-09-29T11:44:44.490Z,1443527084.490 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Servo
2015-09-29T11:44:44.492Z,1443527084.492 [Supervisor](INFO): Opening Config file at: Config/Simulator.cfg
2015-09-29T11:44:45.097Z,1443527085.097 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Simulator
2015-09-29T11:44:45.098Z,1443527085.098 [Supervisor](INFO): Opening Config file at: Config/logger.cfg
2015-09-29T11:44:45.336Z,1443527085.336 [ComponentRegistry](DEBUG): Loaded Config Component "Config/logger
2015-09-29T11:44:45.337Z,1443527085.337 [Supervisor](INFO): Opening Config file at: Config/secure.cfg
2015-09-29T11:44:45.452Z,1443527085.452 [ComponentRegistry](DEBUG): Loaded Config Component "Config/secure
2015-09-29T11:44:45.452Z,1443527085.452 [Supervisor](INFO): Opening Config file at: Config/vehicle.cfg
2015-09-29T11:44:45.975Z,1443527085.975 [ComponentRegistry](DEBUG): Loaded Config Component "Config/vehicle
2015-09-29T11:44:45.976Z,1443527085.976 [Supervisor](INFO): Opening Config file at: Config/workSite.cfg
2015-09-29T11:44:46.148Z,1443527086.148 [ComponentRegistry](DEBUG): Loaded Config Component "Config/workSite
2015-09-29T11:44:46.150Z,1443527086.150 [Supervisor](INFO): Looking for Config files in directory: Config/(none)/
2015-09-29T11:44:46.150Z,1443527086.150 [Supervisor](FAULT): Ignoring configuration overrides from Data/persisted.cfg
2015-09-29T11:44:46.155Z,1443527086.155 [Module Loader](DEBUG): Loading Module at Modules/Control.so
2015-09-29T11:44:46.229Z,1443527086.229 [VerticalControl](DEBUG): Construct VerticalControl.
2015-09-29T11:44:46.367Z,1443527086.367 [VerticalControl] Loaded
2015-09-29T11:44:46.368Z,1443527086.368 [ComponentRegistry](DEBUG): SyncComponent "VerticalControl" handled in the control thread.
2015-09-29T11:44:46.368Z,1443527086.368 [HorizontalControl](DEBUG): Construct HorizontalControl.
2015-09-29T11:44:46.446Z,1443527086.446 [HorizontalControl] Loaded
2015-09-29T11:44:46.446Z,1443527086.446 [ComponentRegistry](DEBUG): SyncComponent "HorizontalControl" handled in the control thread.
2015-09-29T11:44:46.447Z,1443527086.447 [SpeedControl](DEBUG): Construct SpeedControl.
2015-09-29T11:44:46.457Z,1443527086.457 [SpeedControl] Loaded
2015-09-29T11:44:46.457Z,1443527086.457 [ComponentRegistry](DEBUG): SyncComponent "SpeedControl" handled in the control thread.
2015-09-29T11:44:46.458Z,1443527086.458 [LoopControl](DEBUG): Construct LoopControl.
2015-09-29T11:44:46.458Z,1443527086.458 [LoopControl] Loaded
2015-09-29T11:44:46.458Z,1443527086.458 [ComponentRegistry](DEBUG): SyncComponent "LoopControl" handled in the control thread.
2015-09-29T11:44:46.459Z,1443527086.459 [Module Loader](DEBUG): Loaded Module: Control (Contains the Control components, such as Depth, Heading, and Speed Control)
2015-09-29T11:44:46.460Z,1443527086.460 [Module Loader](DEBUG): Loading Module at Modules/BIT.so
2015-09-29T11:44:46.610Z,1443527086.610 [SBIT](DEBUG): Construct Startup Built In Test.
2015-09-29T11:44:46.627Z,1443527086.627 [SBIT] Loaded
2015-09-29T11:44:46.627Z,1443527086.627 [ComponentRegistry](DEBUG): SyncComponent "SBIT" handled in the control thread.
2015-09-29T11:44:46.628Z,1443527086.628 [IBIT](DEBUG): Construct Initiated Built In Test.
2015-09-29T11:44:46.662Z,1443527086.662 [IBIT] Loaded
2015-09-29T11:44:46.662Z,1443527086.662 [ComponentRegistry](DEBUG): SyncComponent "IBIT" handled in the control thread.
2015-09-29T11:44:46.664Z,1443527086.664 [CBIT](DEBUG): Construct Continuous Built In Test.
2015-09-29T11:44:46.820Z,1443527086.820 [CBIT] Loaded
2015-09-29T11:44:46.820Z,1443527086.820 [ComponentRegistry](DEBUG): SyncComponent "CBIT" handled in the control thread.
2015-09-29T11:44:46.820Z,1443527086.820 [Module Loader](DEBUG): Loaded Module: BIT (Contains the BuiltInTest components, such as C Built In Test)
2015-09-29T11:44:46.821Z,1443527086.821 [Module Loader](DEBUG): Loading Module at Modules/Derivation.so
2015-09-29T11:44:46.862Z,1443527086.862 [DepthRateCalculator] Loaded
2015-09-29T11:44:46.863Z,1443527086.863 [ComponentRegistry](DEBUG): SyncComponent "DepthRateCalculator" handled in the control thread.
2015-09-29T11:44:46.868Z,1443527086.868 [PitchRateCalculator] Loaded
2015-09-29T11:44:46.868Z,1443527086.868 [ComponentRegistry](DEBUG): SyncComponent "PitchRateCalculator" handled in the control thread.
2015-09-29T11:44:46.880Z,1443527086.880 [SpeedCalculator] Loaded
2015-09-29T11:44:46.880Z,1443527086.880 [ComponentRegistry](DEBUG): SyncComponent "SpeedCalculator" handled in the control thread.
2015-09-29T11:44:46.902Z,1443527086.902 [TempGradientCalculator] Loaded
2015-09-29T11:44:46.902Z,1443527086.902 [ComponentRegistry](DEBUG): SyncComponent "TempGradientCalculator" handled in the control thread.
2015-09-29T11:44:46.919Z,1443527086.919 [VerticalTemperatureHomogeneityIndexCalculator] Loaded
2015-09-29T11:44:46.919Z,1443527086.919 [ComponentRegistry](DEBUG): SyncComponent "VerticalTemperatureHomogeneityIndexCalculator" handled in the control thread.
2015-09-29T11:44:46.925Z,1443527086.925 [YawRateCalculator] Loaded
2015-09-29T11:44:46.925Z,1443527086.925 [ComponentRegistry](DEBUG): SyncComponent "YawRateCalculator" handled in the control thread.
2015-09-29T11:44:46.926Z,1443527086.926 [Module Loader](DEBUG): Loaded Module: Derivation (Contains the base derivation components)
2015-09-29T11:44:46.926Z,1443527086.926 [Module Loader](DEBUG): Loading Module at Modules/Estimation.so
2015-09-29T11:44:47.049Z,1443527087.049 [StratificationFrontDetector](INFO): threshold set to: 0.399988 degC
2015-09-29T11:44:47.049Z,1443527087.049 [StratificationFrontDetector](DEBUG): (re)initializing
2015-09-29T11:44:47.049Z,1443527087.049 [StratificationFrontDetector] Loaded
2015-09-29T11:44:47.049Z,1443527087.049 [ComponentRegistry](DEBUG): SyncComponent "StratificationFrontDetector" handled in the control thread.
2015-09-29T11:44:47.050Z,1443527087.050 [Module Loader](DEBUG): Loaded Module: Estimation (Contains the base estimation components)
2015-09-29T11:44:47.051Z,1443527087.051 [Module Loader](DEBUG): Loading Module at Modules/Guidance.so
2015-09-29T11:44:47.345Z,1443527087.345 [Module Loader](DEBUG): Loaded Module: Guidance (Contains behaviors and commands)
2015-09-29T11:44:47.345Z,1443527087.345 [Module Loader](DEBUG): Loading Module at Modules/Navigation.so
2015-09-29T11:44:47.478Z,1443527087.478 [DeadReckonUsingMultipleVelocitySources] Loaded
2015-09-29T11:44:47.478Z,1443527087.478 [ComponentRegistry](DEBUG): SyncComponent "DeadReckonUsingMultipleVelocitySources" handled in the control thread.
2015-09-29T11:44:47.539Z,1443527087.539 [DeadReckonUsingSpeedCalculator] Loaded
2015-09-29T11:44:47.540Z,1443527087.540 [ComponentRegistry](DEBUG): SyncComponent "DeadReckonUsingSpeedCalculator" handled in the control thread.
2015-09-29T11:44:47.557Z,1443527087.557 [NavChart] Loaded
2015-09-29T11:44:47.558Z,1443527087.558 [ComponentRegistry](DEBUG): SyncComponent "NavChart" handled in the control thread.
2015-09-29T11:44:47.567Z,1443527087.567 [UniversalFixResidualReporter] Loaded
2015-09-29T11:44:47.567Z,1443527087.567 [ComponentRegistry](DEBUG): SyncComponent "UniversalFixResidualReporter" handled in the control thread.
2015-09-29T11:44:47.568Z,1443527087.568 [Module Loader](DEBUG): Loaded Module: Navigation (Contains the base navigation components)
2015-09-29T11:44:47.569Z,1443527087.569 [Module Loader](DEBUG): Loading Module at Modules/Sample.so
2015-09-29T11:44:47.577Z,1443527087.577 [Module Loader](DEBUG): Loaded Module: Sample (This is a Sample Module of Sample Components)
2015-09-29T11:44:47.578Z,1443527087.578 [Module Loader](DEBUG): Loading Module at Modules/Science.so
2015-09-29T11:44:47.873Z,1443527087.873 [CTD_NeilBrown] Loaded
2015-09-29T11:44:47.873Z,1443527087.873 [ComponentRegistry](DEBUG): Component "CTD_NeilBrown" handled in its own thread.
2015-09-29T11:44:47.875Z,1443527087.875 [CTD_NeilBrown ThreadHandler](DEBUG): Created PCaller Thread at 4059D4E0
2015-09-29T11:44:47.876Z,1443527087.876 [CTD_NeilBrown ThreadHandler](INFO): Protected caller Thread ID is 810
2015-09-29T11:44:47.889Z,1443527087.889 [ISUS] Loaded
2015-09-29T11:44:47.889Z,1443527087.889 [ComponentRegistry](DEBUG): SyncComponent "ISUS" handled in the control thread.
2015-09-29T11:44:47.904Z,1443527087.904 [PAR_Licor] Loaded
2015-09-29T11:44:47.904Z,1443527087.904 [ComponentRegistry](DEBUG): SyncComponent "PAR_Licor" handled in the control thread.
2015-09-29T11:44:47.964Z,1443527087.964 [WetLabsBB2FL] Loaded
2015-09-29T11:44:47.964Z,1443527087.964 [ComponentRegistry](DEBUG): Component "WetLabsBB2FL" handled in its own thread.
2015-09-29T11:44:47.967Z,1443527087.967 [WetLabsBB2FL ThreadHandler](DEBUG): Created PCaller Thread at 405CD4E0
2015-09-29T11:44:47.968Z,1443527087.968 [WetLabsBB2FL ThreadHandler](INFO): Protected caller Thread ID is 811
2015-09-29T11:44:47.968Z,1443527087.968 [Module Loader](DEBUG): Loaded Module: Science (Contains the science components)
2015-09-29T11:44:47.969Z,1443527087.969 [Module Loader](DEBUG): Loading Module at Modules/Sensor.so
2015-09-29T11:44:48.695Z,1443527088.695 [AHRS_sp3003D] Loaded
2015-09-29T11:44:48.695Z,1443527088.695 [ComponentRegistry](DEBUG): SyncComponent "AHRS_sp3003D" handled in the control thread.
2015-09-29T11:44:48.887Z,1443527088.887 [DataOverHttps] Loaded
2015-09-29T11:44:48.888Z,1443527088.888 [ComponentRegistry](DEBUG): SyncComponent "DataOverHttps" handled in the control thread.
2015-09-29T11:44:48.901Z,1443527088.901 [Depth_Keller] Loaded
2015-09-29T11:44:48.901Z,1443527088.901 [ComponentRegistry](DEBUG): SyncComponent "Depth_Keller" handled in the control thread.
2015-09-29T11:44:48.906Z,1443527088.906 [DropWeight] Loaded
2015-09-29T11:44:48.907Z,1443527088.907 [ComponentRegistry](DEBUG): SyncComponent "DropWeight" handled in the control thread.
2015-09-29T11:44:49.063Z,1443527089.063 [DVL_micro] Loaded
2015-09-29T11:44:49.064Z,1443527089.064 [ComponentRegistry](DEBUG): SyncComponent "DVL_micro" handled in the control thread.
2015-09-29T11:44:49.169Z,1443527089.169 [NAL9602] Loaded
2015-09-29T11:44:49.169Z,1443527089.169 [ComponentRegistry](DEBUG): SyncComponent "NAL9602" handled in the control thread.
2015-09-29T11:44:49.216Z,1443527089.216 [Onboard] Loaded
2015-09-29T11:44:49.216Z,1443527089.216 [ComponentRegistry](DEBUG): SyncComponent "Onboard" handled in the control thread.
2015-09-29T11:44:49.232Z,1443527089.232 [Radio_Surface] Loaded
2015-09-29T11:44:49.233Z,1443527089.233 [ComponentRegistry](DEBUG): Component "Radio_Surface" handled in its own thread.
2015-09-29T11:44:49.235Z,1443527089.235 [Radio_Surface ThreadHandler](DEBUG): Created PCaller Thread at 408114E0
2015-09-29T11:44:49.236Z,1443527089.236 [Radio_Surface ThreadHandler](INFO): Protected caller Thread ID is 812
2015-09-29T11:44:49.395Z,1443527089.395 [DAT] Loaded
2015-09-29T11:44:49.396Z,1443527089.396 [ComponentRegistry](DEBUG): SyncComponent "DAT" handled in the control thread.
2015-09-29T11:44:49.402Z,1443527089.402 [SCPI] Loaded
2015-09-29T11:44:49.403Z,1443527089.403 [ComponentRegistry](DEBUG): SyncComponent "SCPI" handled in the control thread.
2015-09-29T11:44:49.403Z,1443527089.403 [Module Loader](DEBUG): Loaded Module: Sensor (Contains the sensor components)
2015-09-29T11:44:49.404Z,1443527089.404 [Module Loader](DEBUG): Loading Module at Modules/Servo.so
2015-09-29T11:44:49.534Z,1443527089.534 [BuoyancyServo] Loaded
2015-09-29T11:44:49.534Z,1443527089.534 [ComponentRegistry](DEBUG): SyncComponent "BuoyancyServo" handled in the control thread.
2015-09-29T11:44:49.551Z,1443527089.551 [ElevatorServo] Loaded
2015-09-29T11:44:49.552Z,1443527089.552 [ComponentRegistry](DEBUG): SyncComponent "ElevatorServo" handled in the control thread.
2015-09-29T11:44:49.563Z,1443527089.563 [MassServo] Loaded
2015-09-29T11:44:49.564Z,1443527089.564 [ComponentRegistry](DEBUG): SyncComponent "MassServo" handled in the control thread.
2015-09-29T11:44:49.576Z,1443527089.576 [RudderServo] Loaded
2015-09-29T11:44:49.576Z,1443527089.576 [ComponentRegistry](DEBUG): SyncComponent "RudderServo" handled in the control thread.
2015-09-29T11:44:49.592Z,1443527089.592 [ThrusterServo] Loaded
2015-09-29T11:44:49.592Z,1443527089.592 [ComponentRegistry](DEBUG): SyncComponent "ThrusterServo" handled in the control thread.
2015-09-29T11:44:49.592Z,1443527089.592 [Module Loader](DEBUG): Loaded Module: Servo (This is the module containing motor controllers)
2015-09-29T11:44:49.593Z,1443527089.593 [Module Loader](DEBUG): Loading Module at Modules/Simulator.so
2015-09-29T11:44:49.795Z,1443527089.795 [InternalSim] Loaded
2015-09-29T11:44:49.795Z,1443527089.795 [ComponentRegistry](DEBUG): SyncComponent "InternalSim" handled in the control thread.
2015-09-29T11:44:49.795Z,1443527089.795 [Module Loader](DEBUG): Loaded Module: Simulator (This is the module containing the Simulator)
2015-09-29T11:44:49.796Z,1443527089.796 [Module Loader](DEBUG): Loading Module at Modules/Trigger.so
2015-09-29T11:44:49.839Z,1443527089.839 [Module Loader](DEBUG): Loaded Module: Trigger (Contains triggers for use in missions)
2015-09-29T11:44:49.844Z,1443527089.844 [ComponentRegistry](DEBUG): SyncComponent "MissionManager" handled in the control thread.
2015-09-29T11:44:49.845Z,1443527089.845 [ComponentRegistry](DEBUG): SyncComponent "Reporter" handled in the control thread.
2015-09-29T11:44:49.851Z,1443527089.851 [ComponentRegistry](DEBUG): Component "NavChartDb" handled in its own thread.
2015-09-29T11:44:49.855Z,1443527089.855 [NavChartDb ThreadHandler](DEBUG): Created PCaller Thread at 408BF4E0
2015-09-29T11:44:49.856Z,1443527089.856 [NavChartDb ThreadHandler](INFO): Protected caller Thread ID is 813
2015-09-29T11:44:49.860Z,1443527089.860 [Supervisor](INFO): Main Thread ID is 760
2015-09-29T11:44:49.861Z,1443527089.861 [Supervisor](DEBUG): Running supervisor.
2015-09-29T11:44:49.861Z,1443527089.861 [CommandLine ThreadHandler](INFO): Handler Thread ID is 814
2015-09-29T11:44:49.868Z,1443527089.868 [controlThread ThreadHandler](INFO): Handler Thread ID is 815
2015-09-29T11:44:49.868Z,1443527089.868 [controlThread](DEBUG): Initializing ControlThread
2015-09-29T11:44:49.869Z,1443527089.869 [VerticalControl](DEBUG): Initialize VerticalControlComponent.
2015-09-29T11:44:49.871Z,1443527089.871 [HorizontalControl](DEBUG): Initialize HorizontalControlComponent.
2015-09-29T11:44:49.872Z,1443527089.872 [SpeedControl](DEBUG): Initialize SpeedControlComponent.
2015-09-29T11:44:49.872Z,1443527089.872 [LoopControl](DEBUG): Initialize LoopControlComponent.
2015-09-29T11:44:49.873Z,1443527089.873 [SBIT](INFO): Initialize SBIT Component.
2015-09-29T11:44:49.873Z,1443527089.873 [SBIT](IMPORTANT): Tethys CM Info: SVN revision:12634
2015-09-29T11:44:49.874Z,1443527089.874 [SBIT](INFO): Kernel Reporting Different Release From Configuration.
Kernel Expected: 2.6.32-45-generic-pae
Kernel Reported: 2.6.27.8
2015-09-29T11:44:49.875Z,1443527089.875 [SBIT](INFO): Kernel Reporting Different Version From Configuration.
Kernel Expected: #102-Ubuntu SMP Wed Jan 2 22:10:16 UTC 2013
Kernel Reported: #641 PREEMPT Mon Sep 28 16:45:10 PDT 2015
2015-09-29T11:44:49.876Z,1443527089.876 [SBIT](INFO): Beginning SBIT in 20.000000 seconds.
2015-09-29T11:44:49.876Z,1443527089.876 [IBIT](INFO): Initialize IBIT Component.
2015-09-29T11:44:49.877Z,1443527089.877 [CBIT](DEBUG): Initialize CBIT Component.
2015-09-29T11:44:49.877Z,1443527089.877 [CBIT](FAULT): LAST RESTART WAS UNINTENTIONAL.
2015-09-29T11:44:49.878Z,1443527089.878 [CBIT](INFO): Last reboot was NOT due to watchdog timer.
2015-09-29T11:44:49.878Z,1443527089.878 [DepthRateCalculator](DEBUG): Initializing DepthRateCalculator.
2015-09-29T11:44:49.878Z,1443527089.878 [PitchRateCalculator](DEBUG): Initializing PitchRateCalculator.
2015-09-29T11:44:49.878Z,1443527089.878 [SpeedCalculator](DEBUG): Initializing SpeedCalculator.
2015-09-29T11:44:49.879Z,1443527089.879 [TempGradientCalculator](DEBUG): Initializing TempGradientCalculator.
2015-09-29T11:44:49.879Z,1443527089.879 [VerticalTemperatureHomogeneityIndexCalculator](DEBUG): (re)initializing
2015-09-29T11:44:49.880Z,1443527089.880 [YawRateCalculator](DEBUG): Initializing YawRateCalculator.
2015-09-29T11:44:49.880Z,1443527089.880 [DeadReckonUsingMultipleVelocitySources](DEBUG): Initializing DeadReckonUsingMultipleVelocitySources component.
2015-09-29T11:44:49.881Z,1443527089.881 [DeadReckonUsingMultipleVelocitySources](INFO): Will consider orientation measurement stale after 120s.
2015-09-29T11:44:49.882Z,1443527089.882 [DeadReckonUsingMultipleVelocitySources](INFO): Will consider velocity measurement stale after 20s.
2015-09-29T11:44:49.882Z,1443527089.882 [DeadReckonUsingSpeedCalculator](DEBUG): Initializing DeadReckonUsingSpeedCalculator component.
2015-09-29T11:44:49.882Z,1443527089.882 [DeadReckonUsingSpeedCalculator](INFO): Will consider orientation measurement stale after 120s.
2015-09-29T11:44:49.883Z,1443527089.883 [DeadReckonUsingSpeedCalculator](INFO): Will consider velocity measurement stale after 20s.
2015-09-29T11:44:49.883Z,1443527089.883 [NavChart](DEBUG): Initialize NavChart Navigation.
2015-09-29T11:44:49.884Z,1443527089.884 [UniversalFixResidualReporter](DEBUG): Initializing UniversalFixResidualReporter component.
2015-09-29T11:44:49.888Z,1443527089.888 [InternalSim](DEBUG):  InternalSim initializing...
2015-09-29T11:44:49.924Z,1443527089.924 [logger ThreadHandler](INFO): Handler Thread ID is 816
2015-09-29T11:44:50.012Z,1443527090.012 [CTD_NeilBrown ThreadHandler](INFO): Handler Thread ID is 817
2015-09-29T11:44:50.020Z,1443527090.020 [WetLabsBB2FL ThreadHandler](INFO): Handler Thread ID is 818
2015-09-29T11:44:50.085Z,1443527090.085 [Radio_Surface ThreadHandler](INFO): Handler Thread ID is 819
2015-09-29T11:44:50.112Z,1443527090.112 [MissionManager](INFO): Loading Mission: Missions/Startup.xml
2015-09-29T11:44:50.132Z,1443527090.132 [NavChartDb ThreadHandler](INFO): Handler Thread ID is 820
2015-09-29T11:44:50.148Z,1443527090.148 [NavChartDb](INFO): Looking for Electronic Nav Chart files in directory: Resources
2015-09-29T11:44:50.150Z,1443527090.150 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US1WC07M.000
2015-09-29T11:44:50.150Z,1443527090.150 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US2WC11M.000
2015-09-29T11:44:50.150Z,1443527090.150 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US3CA52M.000
2015-09-29T11:44:50.151Z,1443527090.151 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US4CA60M.000
2015-09-29T11:44:50.151Z,1443527090.151 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA50M.000
2015-09-29T11:44:50.151Z,1443527090.151 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA61M.000
2015-09-29T11:44:50.151Z,1443527090.151 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA62M.000
2015-09-29T11:44:50.152Z,1443527090.152 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA83M.000
2015-09-29T11:44:50.175Z,1443527090.175 [Startup:A.GoToSurface](DEBUG): Construct GoToSurface.
2015-09-29T11:44:50.186Z,1443527090.186 [MissionManager](DEBUG): 
<?xml version="1.0" encoding="UTF-8"?>
<Mission xmlns="Tethys"
       xmlns:Control="Tethys/Control"
       xmlns:Guidance="Tethys/Guidance" 
       xmlns:Units="Tethys/Units"
       xmlns:Universal="Tethys/Universal"
       xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
       xsi:schemaLocation="Tethys http://okeanids.mbari.org/tethys/Xml/Tethys.xsd
                           Tethys/Control http://okeanids.mbari.org/tethys/Xml/Control.xsd
                           Tethys/Guidance http://okeanids.mbari.org/tethys/Xml/Guidance.xsd
                           Tethys/Units http://okeanids.mbari.org/tethys/Xml/Units.xsd
                           Tethys/Universal http://okeanids.mbari.org/tethys/Xml/Universal.xsd"
       Id="Startup">

    <Guidance:GoToSurface>
        <Progression/>
    </Guidance:GoToSurface>

    <Aggregate Id="StartupSatComms">

        <Sequence/>

        <ReadDatum>
            <Timeout Duration="P1M" />
            <Universal:latitude_fix/>
        </ReadDatum>

        <ReadDatum>
            <Timeout Duration="P1M" />
            <Universal:platform_communications/>
        </ReadDatum>

    </Aggregate>

</Mission>


2015-09-29T11:44:50.187Z,1443527090.187 [MissionManager](INFO): Loading Mission: Missions/Default.xml
2015-09-29T11:44:50.268Z,1443527090.268 [MissionManager](INFO): DefineArg Default.ElapsedSinceDefaultStarted = 0.000000 min
2015-09-29T11:44:50.269Z,1443527090.269 [Default:A.GoToSurface](DEBUG): Construct GoToSurface.
2015-09-29T11:44:50.311Z,1443527090.311 [Default:CheckIn:Read_Iridium:A_Timeout:A.Execute](DEBUG): Construct Execute.
2015-09-29T11:44:50.314Z,1443527090.314 [Default:CheckIn:C.Wait](DEBUG): Construct Wait.
2015-09-29T11:44:50.337Z,1443527090.337 [Default:D.Execute](DEBUG): Construct Execute.
2015-09-29T11:44:50.340Z,1443527090.340 [MissionManager](DEBUG): 
<?xml version="1.0" encoding="UTF-8"?>
<Mission xmlns="Tethys"
xmlns:Guidance="Tethys/Guidance"
xmlns:Units="Tethys/Units"
xmlns:Universal="Tethys/Universal"
xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
xsi:schemaLocation="Tethys http://okeanids.mbari.org/tethys/Xml/Tethys.xsd
Tethys/Guidance http://okeanids.mbari.org/tethys/Xml/Guidance.xsd
Tethys/Units http://okeanids.mbari.org/tethys/Xml/Units.xsd
Tethys/Universal http://okeanids.mbari.org/tethys/Xml/Universal.xsd"
Id="Default">

    <DefineArg Name="ElapsedSinceDefaultStarted"><Units:minute/><Value>0</Value></DefineArg>

    <Guidance:GoToSurface>
        <Progression/>
    </Guidance:GoToSurface>

    <Aggregate Id="CheckIn">

        <Sequence Repeat="288"/>

        <ReadDatum Id="Read_GPS">
            <Sequence/>
            <Timeout Duration="P5M"/>
            <Universal:time_fix/>
        </ReadDatum>

        <ReadDatum Id="Read_Iridium">
            <Sequence/>
            <Timeout Duration="P2H">
                <Guidance:Execute>
                    <Sequence/>
                    <Setting><Guidance:Execute.command/><String>Burn 300</String></Setting>
                </Guidance:Execute>
                <Syslog Severity="Critical">Dropped weight due to communications timeout.</Syslog>
            </Timeout>
            <Universal:platform_communications/>
        </ReadDatum>

        <Guidance:Wait>
            <Sequence/>
            <Setting><Guidance:Wait.duration/><Units:minute/><Value>5</Value></Setting>
        </Guidance:Wait>

        <Assign><Sequence/><Arg Name="ElapsedSinceDefaultStarted"/><Elapsed><Universal:mission_started/></Elapsed></Assign>

        <Syslog Severity="Important">Default mission has been running for <Arg Name="ElapsedSinceDefaultStarted"/><Units:minute/></Syslog>

    </Aggregate>

    <Syslog Severity="Important">Restarting logs and Default mission.</Syslog>

    <Guidance:Execute>
        <Sequence/>
        <Setting><Guidance:Execute.command/><String>restart logs</String></Setting>
    </Guidance:Execute>

</Mission>


2015-09-29T11:44:50.361Z,1443527090.361 [controlThread](DEBUG): Component order: CycleStarter,InternalSim,ISUS,PAR_Licor,AHRS_sp3003D,DataOverHttps,Depth_Keller,DropWeight,DVL_micro,NAL9602,Onboard,DAT,SCPI,PAR_Licor,Depth_Keller,DepthRateCalculator,PitchRateCalculator,SpeedCalculator,TempGradientCalculator,VerticalTemperatureHomogeneityIndexCalculator,YawRateCalculator,StratificationFrontDetector,DeadReckonUsingMultipleVelocitySources,DeadReckonUsingSpeedCalculator,NavChart,UniversalFixResidualReporter,MissionManager,VerticalControl,HorizontalControl,SpeedControl,LoopControl,BuoyancyServo,ElevatorServo,MassServo,RudderServo,ThrusterServo,SBIT,IBIT,CBIT,Reporter,LogSplitter,
2015-09-29T11:44:50.615Z,1443527090.615 [DVL_micro](INFO): Initializing
2015-09-29T11:44:50.788Z,1443527090.788 [DeadReckonUsingMultipleVelocitySources](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T11:44:50.809Z,1443527090.809 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T11:44:50.924Z,1443527090.924 [BuoyancyServo](DEBUG): Initializing BuoyancyServo.
2015-09-29T11:44:50.939Z,1443527090.939 [ElevatorServo](DEBUG): Initializing ElevatorServo.
2015-09-29T11:44:50.951Z,1443527090.951 [MassServo](DEBUG): Initializing MassServo.
2015-09-29T11:44:50.963Z,1443527090.963 [RudderServo](DEBUG): Initializing RudderServo.
2015-09-29T11:44:50.979Z,1443527090.979 [ThrusterServo](DEBUG): Initializing ThrusterServo.
2015-09-29T11:44:51.201Z,1443527091.201 [DeadReckonUsingMultipleVelocitySources](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T11:44:51.202Z,1443527091.202 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T11:45:00.295Z,1443527100.295 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T11:45:00.619Z,1443527100.619 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T11:45:00.766Z,1443527100.766 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T11:45:01.170Z,1443527101.170 [DataOverHttps](INFO): setting available, lastComms_.elapsed()=0.003100
2015-09-29T11:45:01.176Z,1443527101.176 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T11:45:01.565Z,1443527101.565 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T11:45:01.965Z,1443527101.965 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T11:45:02.365Z,1443527102.365 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T11:45:02.765Z,1443527102.765 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T11:45:03.164Z,1443527103.164 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T11:45:03.564Z,1443527103.564 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T11:45:03.963Z,1443527103.963 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T11:45:04.364Z,1443527104.364 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T11:45:04.772Z,1443527104.772 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T11:45:05.164Z,1443527105.164 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T11:45:05.563Z,1443527105.563 [NAL9602](INFO): No messages in MT queue
2015-09-29T11:45:05.564Z,1443527105.564 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T11:45:05.964Z,1443527105.964 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T11:45:06.364Z,1443527106.364 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T11:45:06.764Z,1443527106.764 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T11:45:07.164Z,1443527107.164 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T11:45:07.565Z,1443527107.565 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T11:45:07.966Z,1443527107.966 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T11:45:08.365Z,1443527108.365 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T11:45:08.765Z,1443527108.765 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T11:45:09.165Z,1443527109.165 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T11:45:09.565Z,1443527109.565 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T11:45:09.964Z,1443527109.964 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T11:45:10.374Z,1443527110.374 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T11:45:10.401Z,1443527110.401 [SBIT](IMPORTANT): Beginning Startup BIT
2015-09-29T11:45:10.773Z,1443527110.773 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T11:45:11.174Z,1443527111.174 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T11:45:11.574Z,1443527111.574 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T11:45:11.973Z,1443527111.973 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T11:45:12.404Z,1443527112.404 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T11:45:12.774Z,1443527112.774 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T11:45:13.174Z,1443527113.174 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T11:45:13.574Z,1443527113.574 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T11:45:13.975Z,1443527113.975 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T11:45:14.376Z,1443527114.376 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T11:45:14.774Z,1443527114.774 [D