2015-09-29T11:28:54.462Z,1443526134.462 [Supervisor](DEBUG): Initializing supervisor.
2015-09-29T11:28:54.465Z,1443526134.465 [SyncHandler](DEBUG): Created PCaller Thread at 4034C4E0
2015-09-29T11:28:54.466Z,1443526134.466 [SyncHandler](INFO): Protected caller Thread ID is 761
2015-09-29T11:28:54.466Z,1443526134.466 [ComponentRegistry](DEBUG): Component "controlThread" handled in its own thread.
2015-09-29T11:28:54.468Z,1443526134.468 [controlThread ThreadHandler](DEBUG): Created PCaller Thread at 4037C4E0
2015-09-29T11:28:54.468Z,1443526134.468 [controlThread ThreadHandler](INFO): Protected caller Thread ID is 762
2015-09-29T11:28:54.471Z,1443526134.471 [ComponentRegistry](DEBUG): SyncComponent "CycleStarter" handled in the control thread.
2015-09-29T11:28:54.483Z,1443526134.483 [ComponentRegistry](DEBUG): Component "CommandLine" handled in its own thread.
2015-09-29T11:28:54.488Z,1443526134.488 [CommandLine ThreadHandler](DEBUG): Created PCaller Thread at 403AC4E0
2015-09-29T11:28:54.488Z,1443526134.488 [CommandLine ThreadHandler](INFO): Protected caller Thread ID is 763
2015-09-29T11:28:54.489Z,1443526134.489 [ComponentRegistry](DEBUG): Component "logger" handled in its own thread.
2015-09-29T11:28:54.492Z,1443526134.492 [logger ThreadHandler](DEBUG): Created PCaller Thread at 403DC4E0
2015-09-29T11:28:54.492Z,1443526134.492 [logger ThreadHandler](INFO): Protected caller Thread ID is 764
2015-09-29T11:28:54.495Z,1443526134.495 [ComponentRegistry](DEBUG): SyncComponent "LogSplitter" handled in the control thread.
2015-09-29T11:28:54.495Z,1443526134.495 [Supervisor](INFO): Looking for Config files in directory: Config/
2015-09-29T11:28:54.499Z,1443526134.499 [Supervisor](INFO): Opening Config file at: Config/Control.cfg
2015-09-29T11:28:54.879Z,1443526134.879 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Control
2015-09-29T11:28:54.881Z,1443526134.881 [Supervisor](INFO): Opening Config file at: Config/BIT.cfg
2015-09-29T11:28:55.073Z,1443526135.073 [ComponentRegistry](DEBUG): Loaded Config Component "Config/BIT
2015-09-29T11:28:55.075Z,1443526135.075 [Supervisor](INFO): Opening Config file at: Config/Derivation.cfg
2015-09-29T11:28:55.220Z,1443526135.220 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Derivation
2015-09-29T11:28:55.221Z,1443526135.221 [Supervisor](INFO): Opening Config file at: Config/Estimation.cfg
2015-09-29T11:28:55.365Z,1443526135.365 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Estimation
2015-09-29T11:28:55.366Z,1443526135.366 [Supervisor](INFO): Opening Config file at: Config/Guidance.cfg
2015-09-29T11:28:55.461Z,1443526135.461 [Supervisor](INFO): Opening Config file at: Config/Navigation.cfg
2015-09-29T11:28:55.681Z,1443526135.681 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Navigation
2015-09-29T11:28:55.682Z,1443526135.682 [Supervisor](INFO): Opening Config file at: Config/Sample.cfg
2015-09-29T11:28:55.777Z,1443526135.777 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Sample
2015-09-29T11:28:55.777Z,1443526135.777 [Supervisor](INFO): Opening Config file at: Config/Science.cfg
2015-09-29T11:28:56.089Z,1443526136.089 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Science
2015-09-29T11:28:56.090Z,1443526136.090 [Supervisor](INFO): Opening Config file at: Config/Sensor.cfg
2015-09-29T11:28:56.485Z,1443526136.485 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Sensor
2015-09-29T11:28:56.486Z,1443526136.486 [Supervisor](INFO): Opening Config file at: Config/Servo.cfg
2015-09-29T11:28:56.837Z,1443526136.837 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Servo
2015-09-29T11:28:56.839Z,1443526136.839 [Supervisor](INFO): Opening Config file at: Config/Simulator.cfg
2015-09-29T11:28:57.431Z,1443526137.431 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Simulator
2015-09-29T11:28:57.432Z,1443526137.432 [Supervisor](INFO): Opening Config file at: Config/logger.cfg
2015-09-29T11:28:57.661Z,1443526137.661 [ComponentRegistry](DEBUG): Loaded Config Component "Config/logger
2015-09-29T11:28:57.662Z,1443526137.662 [Supervisor](INFO): Opening Config file at: Config/secure.cfg
2015-09-29T11:28:57.781Z,1443526137.781 [ComponentRegistry](DEBUG): Loaded Config Component "Config/secure
2015-09-29T11:28:57.781Z,1443526137.781 [Supervisor](INFO): Opening Config file at: Config/vehicle.cfg
2015-09-29T11:28:58.291Z,1443526138.291 [ComponentRegistry](DEBUG): Loaded Config Component "Config/vehicle
2015-09-29T11:28:58.292Z,1443526138.292 [Supervisor](INFO): Opening Config file at: Config/workSite.cfg
2015-09-29T11:28:58.457Z,1443526138.457 [ComponentRegistry](DEBUG): Loaded Config Component "Config/workSite
2015-09-29T11:28:58.459Z,1443526138.459 [Supervisor](INFO): Looking for Config files in directory: Config/(none)/
2015-09-29T11:28:58.459Z,1443526138.459 [Supervisor](FAULT): Ignoring configuration overrides from Data/persisted.cfg
2015-09-29T11:28:58.464Z,1443526138.464 [Module Loader](DEBUG): Loading Module at Modules/Control.so
2015-09-29T11:28:58.537Z,1443526138.537 [VerticalControl](DEBUG): Construct VerticalControl.
2015-09-29T11:28:58.670Z,1443526138.670 [VerticalControl] Loaded
2015-09-29T11:28:58.670Z,1443526138.670 [ComponentRegistry](DEBUG): SyncComponent "VerticalControl" handled in the control thread.
2015-09-29T11:28:58.671Z,1443526138.671 [HorizontalControl](DEBUG): Construct HorizontalControl.
2015-09-29T11:28:58.751Z,1443526138.751 [HorizontalControl] Loaded
2015-09-29T11:28:58.751Z,1443526138.751 [ComponentRegistry](DEBUG): SyncComponent "HorizontalControl" handled in the control thread.
2015-09-29T11:28:58.752Z,1443526138.752 [SpeedControl](DEBUG): Construct SpeedControl.
2015-09-29T11:28:58.758Z,1443526138.758 [SpeedControl] Loaded
2015-09-29T11:28:58.758Z,1443526138.758 [ComponentRegistry](DEBUG): SyncComponent "SpeedControl" handled in the control thread.
2015-09-29T11:28:58.759Z,1443526138.759 [LoopControl](DEBUG): Construct LoopControl.
2015-09-29T11:28:58.759Z,1443526138.759 [LoopControl] Loaded
2015-09-29T11:28:58.760Z,1443526138.760 [ComponentRegistry](DEBUG): SyncComponent "LoopControl" handled in the control thread.
2015-09-29T11:28:58.760Z,1443526138.760 [Module Loader](DEBUG): Loaded Module: Control (Contains the Control components, such as Depth, Heading, and Speed Control)
2015-09-29T11:28:58.761Z,1443526138.761 [Module Loader](DEBUG): Loading Module at Modules/BIT.so
2015-09-29T11:28:58.921Z,1443526138.921 [SBIT](DEBUG): Construct Startup Built In Test.
2015-09-29T11:28:58.938Z,1443526138.938 [SBIT] Loaded
2015-09-29T11:28:58.938Z,1443526138.938 [ComponentRegistry](DEBUG): SyncComponent "SBIT" handled in the control thread.
2015-09-29T11:28:58.939Z,1443526138.939 [IBIT](DEBUG): Construct Initiated Built In Test.
2015-09-29T11:28:58.968Z,1443526138.968 [IBIT] Loaded
2015-09-29T11:28:58.969Z,1443526138.969 [ComponentRegistry](DEBUG): SyncComponent "IBIT" handled in the control thread.
2015-09-29T11:28:58.971Z,1443526138.971 [CBIT](DEBUG): Construct Continuous Built In Test.
2015-09-29T11:28:59.124Z,1443526139.124 [CBIT] Loaded
2015-09-29T11:28:59.125Z,1443526139.125 [ComponentRegistry](DEBUG): SyncComponent "CBIT" handled in the control thread.
2015-09-29T11:28:59.125Z,1443526139.125 [Module Loader](DEBUG): Loaded Module: BIT (Contains the BuiltInTest components, such as C Built In Test)
2015-09-29T11:28:59.126Z,1443526139.126 [Module Loader](DEBUG): Loading Module at Modules/Derivation.so
2015-09-29T11:28:59.166Z,1443526139.166 [DepthRateCalculator] Loaded
2015-09-29T11:28:59.166Z,1443526139.166 [ComponentRegistry](DEBUG): SyncComponent "DepthRateCalculator" handled in the control thread.
2015-09-29T11:28:59.172Z,1443526139.172 [PitchRateCalculator] Loaded
2015-09-29T11:28:59.172Z,1443526139.172 [ComponentRegistry](DEBUG): SyncComponent "PitchRateCalculator" handled in the control thread.
2015-09-29T11:28:59.184Z,1443526139.184 [SpeedCalculator] Loaded
2015-09-29T11:28:59.184Z,1443526139.184 [ComponentRegistry](DEBUG): SyncComponent "SpeedCalculator" handled in the control thread.
2015-09-29T11:28:59.205Z,1443526139.205 [TempGradientCalculator] Loaded
2015-09-29T11:28:59.206Z,1443526139.206 [ComponentRegistry](DEBUG): SyncComponent "TempGradientCalculator" handled in the control thread.
2015-09-29T11:28:59.223Z,1443526139.223 [VerticalTemperatureHomogeneityIndexCalculator] Loaded
2015-09-29T11:28:59.223Z,1443526139.223 [ComponentRegistry](DEBUG): SyncComponent "VerticalTemperatureHomogeneityIndexCalculator" handled in the control thread.
2015-09-29T11:28:59.228Z,1443526139.228 [YawRateCalculator] Loaded
2015-09-29T11:28:59.228Z,1443526139.228 [ComponentRegistry](DEBUG): SyncComponent "YawRateCalculator" handled in the control thread.
2015-09-29T11:28:59.229Z,1443526139.229 [Module Loader](DEBUG): Loaded Module: Derivation (Contains the base derivation components)
2015-09-29T11:28:59.230Z,1443526139.230 [Module Loader](DEBUG): Loading Module at Modules/Estimation.so
2015-09-29T11:28:59.349Z,1443526139.349 [StratificationFrontDetector](INFO): threshold set to: 0.399988 degC
2015-09-29T11:28:59.349Z,1443526139.349 [StratificationFrontDetector](DEBUG): (re)initializing
2015-09-29T11:28:59.349Z,1443526139.349 [StratificationFrontDetector] Loaded
2015-09-29T11:28:59.349Z,1443526139.349 [ComponentRegistry](DEBUG): SyncComponent "StratificationFrontDetector" handled in the control thread.
2015-09-29T11:28:59.350Z,1443526139.350 [Module Loader](DEBUG): Loaded Module: Estimation (Contains the base estimation components)
2015-09-29T11:28:59.351Z,1443526139.351 [Module Loader](DEBUG): Loading Module at Modules/Guidance.so
2015-09-29T11:28:59.639Z,1443526139.639 [Module Loader](DEBUG): Loaded Module: Guidance (Contains behaviors and commands)
2015-09-29T11:28:59.640Z,1443526139.640 [Module Loader](DEBUG): Loading Module at Modules/Navigation.so
2015-09-29T11:28:59.768Z,1443526139.768 [DeadReckonUsingMultipleVelocitySources] Loaded
2015-09-29T11:28:59.768Z,1443526139.768 [ComponentRegistry](DEBUG): SyncComponent "DeadReckonUsingMultipleVelocitySources" handled in the control thread.
2015-09-29T11:28:59.832Z,1443526139.832 [DeadReckonUsingSpeedCalculator] Loaded
2015-09-29T11:28:59.832Z,1443526139.832 [ComponentRegistry](DEBUG): SyncComponent "DeadReckonUsingSpeedCalculator" handled in the control thread.
2015-09-29T11:28:59.850Z,1443526139.850 [NavChart] Loaded
2015-09-29T11:28:59.850Z,1443526139.850 [ComponentRegistry](DEBUG): SyncComponent "NavChart" handled in the control thread.
2015-09-29T11:28:59.855Z,1443526139.855 [UniversalFixResidualReporter] Loaded
2015-09-29T11:28:59.856Z,1443526139.856 [ComponentRegistry](DEBUG): SyncComponent "UniversalFixResidualReporter" handled in the control thread.
2015-09-29T11:28:59.856Z,1443526139.856 [Module Loader](DEBUG): Loaded Module: Navigation (Contains the base navigation components)
2015-09-29T11:28:59.857Z,1443526139.857 [Module Loader](DEBUG): Loading Module at Modules/Sample.so
2015-09-29T11:28:59.866Z,1443526139.866 [Module Loader](DEBUG): Loaded Module: Sample (This is a Sample Module of Sample Components)
2015-09-29T11:28:59.866Z,1443526139.866 [Module Loader](DEBUG): Loading Module at Modules/Science.so
2015-09-29T11:29:00.165Z,1443526140.165 [CTD_NeilBrown] Loaded
2015-09-29T11:29:00.165Z,1443526140.165 [ComponentRegistry](DEBUG): Component "CTD_NeilBrown" handled in its own thread.
2015-09-29T11:29:00.168Z,1443526140.168 [CTD_NeilBrown ThreadHandler](DEBUG): Created PCaller Thread at 4059D4E0
2015-09-29T11:29:00.168Z,1443526140.168 [CTD_NeilBrown ThreadHandler](INFO): Protected caller Thread ID is 810
2015-09-29T11:29:00.181Z,1443526140.181 [ISUS] Loaded
2015-09-29T11:29:00.182Z,1443526140.182 [ComponentRegistry](DEBUG): SyncComponent "ISUS" handled in the control thread.
2015-09-29T11:29:00.196Z,1443526140.196 [PAR_Licor] Loaded
2015-09-29T11:29:00.196Z,1443526140.196 [ComponentRegistry](DEBUG): SyncComponent "PAR_Licor" handled in the control thread.
2015-09-29T11:29:00.252Z,1443526140.252 [WetLabsBB2FL] Loaded
2015-09-29T11:29:00.252Z,1443526140.252 [ComponentRegistry](DEBUG): Component "WetLabsBB2FL" handled in its own thread.
2015-09-29T11:29:00.260Z,1443526140.260 [WetLabsBB2FL ThreadHandler](DEBUG): Created PCaller Thread at 405CD4E0
2015-09-29T11:29:00.260Z,1443526140.260 [WetLabsBB2FL ThreadHandler](INFO): Protected caller Thread ID is 811
2015-09-29T11:29:00.261Z,1443526140.261 [Module Loader](DEBUG): Loaded Module: Science (Contains the science components)
2015-09-29T11:29:00.262Z,1443526140.262 [Module Loader](DEBUG): Loading Module at Modules/Sensor.so
2015-09-29T11:29:00.997Z,1443526140.997 [AHRS_sp3003D] Loaded
2015-09-29T11:29:00.997Z,1443526140.997 [ComponentRegistry](DEBUG): SyncComponent "AHRS_sp3003D" handled in the control thread.
2015-09-29T11:29:01.192Z,1443526141.192 [DataOverHttps] Loaded
2015-09-29T11:29:01.192Z,1443526141.192 [ComponentRegistry](DEBUG): SyncComponent "DataOverHttps" handled in the control thread.
2015-09-29T11:29:01.205Z,1443526141.205 [Depth_Keller] Loaded
2015-09-29T11:29:01.206Z,1443526141.206 [ComponentRegistry](DEBUG): SyncComponent "Depth_Keller" handled in the control thread.
2015-09-29T11:29:01.211Z,1443526141.211 [DropWeight] Loaded
2015-09-29T11:29:01.211Z,1443526141.211 [ComponentRegistry](DEBUG): SyncComponent "DropWeight" handled in the control thread.
2015-09-29T11:29:01.367Z,1443526141.367 [DVL_micro] Loaded
2015-09-29T11:29:01.367Z,1443526141.367 [ComponentRegistry](DEBUG): SyncComponent "DVL_micro" handled in the control thread.
2015-09-29T11:29:01.474Z,1443526141.474 [NAL9602] Loaded
2015-09-29T11:29:01.474Z,1443526141.474 [ComponentRegistry](DEBUG): SyncComponent "NAL9602" handled in the control thread.
2015-09-29T11:29:01.521Z,1443526141.521 [Onboard] Loaded
2015-09-29T11:29:01.521Z,1443526141.521 [ComponentRegistry](DEBUG): SyncComponent "Onboard" handled in the control thread.
2015-09-29T11:29:01.533Z,1443526141.533 [Radio_Surface] Loaded
2015-09-29T11:29:01.533Z,1443526141.533 [ComponentRegistry](DEBUG): Component "Radio_Surface" handled in its own thread.
2015-09-29T11:29:01.536Z,1443526141.536 [Radio_Surface ThreadHandler](DEBUG): Created PCaller Thread at 408114E0
2015-09-29T11:29:01.536Z,1443526141.536 [Radio_Surface ThreadHandler](INFO): Protected caller Thread ID is 812
2015-09-29T11:29:01.694Z,1443526141.694 [DAT] Loaded
2015-09-29T11:29:01.694Z,1443526141.694 [ComponentRegistry](DEBUG): SyncComponent "DAT" handled in the control thread.
2015-09-29T11:29:01.701Z,1443526141.701 [SCPI] Loaded
2015-09-29T11:29:01.701Z,1443526141.701 [ComponentRegistry](DEBUG): SyncComponent "SCPI" handled in the control thread.
2015-09-29T11:29:01.702Z,1443526141.702 [Module Loader](DEBUG): Loaded Module: Sensor (Contains the sensor components)
2015-09-29T11:29:01.703Z,1443526141.703 [Module Loader](DEBUG): Loading Module at Modules/Servo.so
2015-09-29T11:29:01.833Z,1443526141.833 [BuoyancyServo] Loaded
2015-09-29T11:29:01.833Z,1443526141.833 [ComponentRegistry](DEBUG): SyncComponent "BuoyancyServo" handled in the control thread.
2015-09-29T11:29:01.850Z,1443526141.850 [ElevatorServo] Loaded
2015-09-29T11:29:01.850Z,1443526141.850 [ComponentRegistry](DEBUG): SyncComponent "ElevatorServo" handled in the control thread.
2015-09-29T11:29:01.862Z,1443526141.862 [MassServo] Loaded
2015-09-29T11:29:01.863Z,1443526141.863 [ComponentRegistry](DEBUG): SyncComponent "MassServo" handled in the control thread.
2015-09-29T11:29:01.874Z,1443526141.874 [RudderServo] Loaded
2015-09-29T11:29:01.875Z,1443526141.875 [ComponentRegistry](DEBUG): SyncComponent "RudderServo" handled in the control thread.
2015-09-29T11:29:01.886Z,1443526141.886 [ThrusterServo] Loaded
2015-09-29T11:29:01.886Z,1443526141.886 [ComponentRegistry](DEBUG): SyncComponent "ThrusterServo" handled in the control thread.
2015-09-29T11:29:01.887Z,1443526141.887 [Module Loader](DEBUG): Loaded Module: Servo (This is the module containing motor controllers)
2015-09-29T11:29:01.887Z,1443526141.887 [Module Loader](DEBUG): Loading Module at Modules/Simulator.so
2015-09-29T11:29:02.092Z,1443526142.092 [InternalSim] Loaded
2015-09-29T11:29:02.092Z,1443526142.092 [ComponentRegistry](DEBUG): SyncComponent "InternalSim" handled in the control thread.
2015-09-29T11:29:02.093Z,1443526142.093 [Module Loader](DEBUG): Loaded Module: Simulator (This is the module containing the Simulator)
2015-09-29T11:29:02.093Z,1443526142.093 [Module Loader](DEBUG): Loading Module at Modules/Trigger.so
2015-09-29T11:29:02.136Z,1443526142.136 [Module Loader](DEBUG): Loaded Module: Trigger (Contains triggers for use in missions)
2015-09-29T11:29:02.140Z,1443526142.140 [ComponentRegistry](DEBUG): SyncComponent "MissionManager" handled in the control thread.
2015-09-29T11:29:02.141Z,1443526142.141 [ComponentRegistry](DEBUG): SyncComponent "Reporter" handled in the control thread.
2015-09-29T11:29:02.148Z,1443526142.148 [ComponentRegistry](DEBUG): Component "NavChartDb" handled in its own thread.
2015-09-29T11:29:02.152Z,1443526142.152 [NavChartDb ThreadHandler](DEBUG): Created PCaller Thread at 408BF4E0
2015-09-29T11:29:02.153Z,1443526142.153 [NavChartDb ThreadHandler](INFO): Protected caller Thread ID is 813
2015-09-29T11:29:02.157Z,1443526142.157 [Supervisor](INFO): Main Thread ID is 760
2015-09-29T11:29:02.157Z,1443526142.157 [Supervisor](DEBUG): Running supervisor.
2015-09-29T11:29:02.158Z,1443526142.158 [CommandLine ThreadHandler](INFO): Handler Thread ID is 814
2015-09-29T11:29:02.165Z,1443526142.165 [controlThread ThreadHandler](INFO): Handler Thread ID is 815
2015-09-29T11:29:02.165Z,1443526142.165 [controlThread](DEBUG): Initializing ControlThread
2015-09-29T11:29:02.166Z,1443526142.166 [VerticalControl](DEBUG): Initialize VerticalControlComponent.
2015-09-29T11:29:02.168Z,1443526142.168 [HorizontalControl](DEBUG): Initialize HorizontalControlComponent.
2015-09-29T11:29:02.169Z,1443526142.169 [SpeedControl](DEBUG): Initialize SpeedControlComponent.
2015-09-29T11:29:02.169Z,1443526142.169 [LoopControl](DEBUG): Initialize LoopControlComponent.
2015-09-29T11:29:02.169Z,1443526142.169 [SBIT](INFO): Initialize SBIT Component.
2015-09-29T11:29:02.170Z,1443526142.170 [SBIT](IMPORTANT): Tethys CM Info: SVN revision:12634
2015-09-29T11:29:02.171Z,1443526142.171 [SBIT](INFO): Kernel Reporting Different Release From Configuration.
Kernel Expected: 2.6.32-45-generic-pae
Kernel Reported: 2.6.27.8
2015-09-29T11:29:02.172Z,1443526142.172 [SBIT](INFO): Kernel Reporting Different Version From Configuration.
Kernel Expected: #102-Ubuntu SMP Wed Jan 2 22:10:16 UTC 2013
Kernel Reported: #641 PREEMPT Mon Sep 28 16:45:10 PDT 2015
2015-09-29T11:29:02.173Z,1443526142.173 [SBIT](INFO): Beginning SBIT in 20.000000 seconds.
2015-09-29T11:29:02.173Z,1443526142.173 [IBIT](INFO): Initialize IBIT Component.
2015-09-29T11:29:02.174Z,1443526142.174 [CBIT](DEBUG): Initialize CBIT Component.
2015-09-29T11:29:02.174Z,1443526142.174 [CBIT](FAULT): LAST RESTART WAS UNINTENTIONAL.
2015-09-29T11:29:02.174Z,1443526142.174 [CBIT](INFO): Last reboot was NOT due to watchdog timer.
2015-09-29T11:29:02.175Z,1443526142.175 [DepthRateCalculator](DEBUG): Initializing DepthRateCalculator.
2015-09-29T11:29:02.175Z,1443526142.175 [PitchRateCalculator](DEBUG): Initializing PitchRateCalculator.
2015-09-29T11:29:02.175Z,1443526142.175 [SpeedCalculator](DEBUG): Initializing SpeedCalculator.
2015-09-29T11:29:02.176Z,1443526142.176 [TempGradientCalculator](DEBUG): Initializing TempGradientCalculator.
2015-09-29T11:29:02.176Z,1443526142.176 [VerticalTemperatureHomogeneityIndexCalculator](DEBUG): (re)initializing
2015-09-29T11:29:02.177Z,1443526142.177 [YawRateCalculator](DEBUG): Initializing YawRateCalculator.
2015-09-29T11:29:02.177Z,1443526142.177 [DeadReckonUsingMultipleVelocitySources](DEBUG): Initializing DeadReckonUsingMultipleVelocitySources component.
2015-09-29T11:29:02.178Z,1443526142.178 [DeadReckonUsingMultipleVelocitySources](INFO): Will consider orientation measurement stale after 120s.
2015-09-29T11:29:02.178Z,1443526142.178 [DeadReckonUsingMultipleVelocitySources](INFO): Will consider velocity measurement stale after 20s.
2015-09-29T11:29:02.179Z,1443526142.179 [DeadReckonUsingSpeedCalculator](DEBUG): Initializing DeadReckonUsingSpeedCalculator component.
2015-09-29T11:29:02.179Z,1443526142.179 [DeadReckonUsingSpeedCalculator](INFO): Will consider orientation measurement stale after 120s.
2015-09-29T11:29:02.180Z,1443526142.180 [DeadReckonUsingSpeedCalculator](INFO): Will consider velocity measurement stale after 20s.
2015-09-29T11:29:02.180Z,1443526142.180 [NavChart](DEBUG): Initialize NavChart Navigation.
2015-09-29T11:29:02.180Z,1443526142.180 [UniversalFixResidualReporter](DEBUG): Initializing UniversalFixResidualReporter component.
2015-09-29T11:29:02.185Z,1443526142.185 [InternalSim](DEBUG):  InternalSim initializing...
2015-09-29T11:29:02.221Z,1443526142.221 [logger ThreadHandler](INFO): Handler Thread ID is 816
2015-09-29T11:29:02.309Z,1443526142.309 [CTD_NeilBrown ThreadHandler](INFO): Handler Thread ID is 817
2015-09-29T11:29:02.317Z,1443526142.317 [WetLabsBB2FL ThreadHandler](INFO): Handler Thread ID is 818
2015-09-29T11:29:02.380Z,1443526142.380 [Radio_Surface ThreadHandler](INFO): Handler Thread ID is 819
2015-09-29T11:29:02.395Z,1443526142.395 [MissionManager](INFO): Loading Mission: Missions/Startup.xml
2015-09-29T11:29:02.407Z,1443526142.407 [NavChartDb ThreadHandler](INFO): Handler Thread ID is 820
2015-09-29T11:29:02.449Z,1443526142.449 [NavChartDb](INFO): Looking for Electronic Nav Chart files in directory: Resources
2015-09-29T11:29:02.453Z,1443526142.453 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US1WC07M.000
2015-09-29T11:29:02.453Z,1443526142.453 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US2WC11M.000
2015-09-29T11:29:02.453Z,1443526142.453 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US3CA52M.000
2015-09-29T11:29:02.453Z,1443526142.453 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US4CA60M.000
2015-09-29T11:29:02.454Z,1443526142.454 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA50M.000
2015-09-29T11:29:02.454Z,1443526142.454 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA61M.000
2015-09-29T11:29:02.454Z,1443526142.454 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA62M.000
2015-09-29T11:29:02.454Z,1443526142.454 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA83M.000
2015-09-29T11:29:02.585Z,1443526142.585 [Startup:A.GoToSurface](DEBUG): Construct GoToSurface.
2015-09-29T11:29:02.596Z,1443526142.596 [MissionManager](DEBUG): 
<?xml version="1.0" encoding="UTF-8"?>
<Mission xmlns="Tethys"
       xmlns:Control="Tethys/Control"
       xmlns:Guidance="Tethys/Guidance" 
       xmlns:Units="Tethys/Units"
       xmlns:Universal="Tethys/Universal"
       xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
       xsi:schemaLocation="Tethys http://okeanids.mbari.org/tethys/Xml/Tethys.xsd
                           Tethys/Control http://okeanids.mbari.org/tethys/Xml/Control.xsd
                           Tethys/Guidance http://okeanids.mbari.org/tethys/Xml/Guidance.xsd
                           Tethys/Units http://okeanids.mbari.org/tethys/Xml/Units.xsd
                           Tethys/Universal http://okeanids.mbari.org/tethys/Xml/Universal.xsd"
       Id="Startup">

    <Guidance:GoToSurface>
        <Progression/>
    </Guidance:GoToSurface>

    <Aggregate Id="StartupSatComms">

        <Sequence/>

        <ReadDatum>
            <Timeout Duration="P1M" />
            <Universal:latitude_fix/>
        </ReadDatum>

        <ReadDatum>
            <Timeout Duration="P1M" />
            <Universal:platform_communications/>
        </ReadDatum>

    </Aggregate>

</Mission>


2015-09-29T11:29:02.601Z,1443526142.601 [MissionManager](INFO): Loading Mission: Missions/Default.xml
2015-09-29T11:29:02.652Z,1443526142.652 [MissionManager](INFO): DefineArg Default.ElapsedSinceDefaultStarted = 0.000000 min
2015-09-29T11:29:02.653Z,1443526142.653 [Default:A.GoToSurface](DEBUG): Construct GoToSurface.
2015-09-29T11:29:02.675Z,1443526142.675 [Default:CheckIn:Read_Iridium:A_Timeout:A.Execute](DEBUG): Construct Execute.
2015-09-29T11:29:02.694Z,1443526142.694 [Default:CheckIn:C.Wait](DEBUG): Construct Wait.
2015-09-29T11:29:02.716Z,1443526142.716 [Default:D.Execute](DEBUG): Construct Execute.
2015-09-29T11:29:02.719Z,1443526142.719 [MissionManager](DEBUG): 
<?xml version="1.0" encoding="UTF-8"?>
<Mission xmlns="Tethys"
xmlns:Guidance="Tethys/Guidance"
xmlns:Units="Tethys/Units"
xmlns:Universal="Tethys/Universal"
xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
xsi:schemaLocation="Tethys http://okeanids.mbari.org/tethys/Xml/Tethys.xsd
Tethys/Guidance http://okeanids.mbari.org/tethys/Xml/Guidance.xsd
Tethys/Units http://okeanids.mbari.org/tethys/Xml/Units.xsd
Tethys/Universal http://okeanids.mbari.org/tethys/Xml/Universal.xsd"
Id="Default">

    <DefineArg Name="ElapsedSinceDefaultStarted"><Units:minute/><Value>0</Value></DefineArg>

    <Guidance:GoToSurface>
        <Progression/>
    </Guidance:GoToSurface>

    <Aggregate Id="CheckIn">

        <Sequence Repeat="288"/>

        <ReadDatum Id="Read_GPS">
            <Sequence/>
            <Timeout Duration="P5M"/>
            <Universal:time_fix/>
        </ReadDatum>

        <ReadDatum Id="Read_Iridium">
            <Sequence/>
            <Timeout Duration="P2H">
                <Guidance:Execute>
                    <Sequence/>
                    <Setting><Guidance:Execute.command/><String>Burn 300</String></Setting>
                </Guidance:Execute>
                <Syslog Severity="Critical">Dropped weight due to communications timeout.</Syslog>
            </Timeout>
            <Universal:platform_communications/>
        </ReadDatum>

        <Guidance:Wait>
            <Sequence/>
            <Setting><Guidance:Wait.duration/><Units:minute/><Value>5</Value></Setting>
        </Guidance:Wait>

        <Assign><Sequence/><Arg Name="ElapsedSinceDefaultStarted"/><Elapsed><Universal:mission_started/></Elapsed></Assign>

        <Syslog Severity="Important">Default mission has been running for <Arg Name="ElapsedSinceDefaultStarted"/><Units:minute/></Syslog>

    </Aggregate>

    <Syslog Severity="Important">Restarting logs and Default mission.</Syslog>

    <Guidance:Execute>
        <Sequence/>
        <Setting><Guidance:Execute.command/><String>restart logs</String></Setting>
    </Guidance:Execute>

</Mission>


2015-09-29T11:29:02.725Z,1443526142.725 [controlThread](DEBUG): Component order: CycleStarter,InternalSim,ISUS,PAR_Licor,AHRS_sp3003D,DataOverHttps,Depth_Keller,DropWeight,DVL_micro,NAL9602,Onboard,DAT,SCPI,PAR_Licor,Depth_Keller,DepthRateCalculator,PitchRateCalculator,SpeedCalculator,TempGradientCalculator,VerticalTemperatureHomogeneityIndexCalculator,YawRateCalculator,StratificationFrontDetector,DeadReckonUsingMultipleVelocitySources,DeadReckonUsingSpeedCalculator,NavChart,UniversalFixResidualReporter,MissionManager,VerticalControl,HorizontalControl,SpeedControl,LoopControl,BuoyancyServo,ElevatorServo,MassServo,RudderServo,ThrusterServo,SBIT,IBIT,CBIT,Reporter,LogSplitter,
2015-09-29T11:29:02.946Z,1443526142.946 [DVL_micro](INFO): Initializing
2015-09-29T11:29:03.096Z,1443526143.096 [DeadReckonUsingMultipleVelocitySources](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T11:29:03.108Z,1443526143.108 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T11:29:03.220Z,1443526143.220 [BuoyancyServo](DEBUG): Initializing BuoyancyServo.
2015-09-29T11:29:03.233Z,1443526143.233 [ElevatorServo](DEBUG): Initializing ElevatorServo.
2015-09-29T11:29:03.252Z,1443526143.252 [MassServo](DEBUG): Initializing MassServo.
2015-09-29T11:29:03.259Z,1443526143.259 [RudderServo](DEBUG): Initializing RudderServo.
2015-09-29T11:29:03.284Z,1443526143.284 [ThrusterServo](DEBUG): Initializing ThrusterServo.
2015-09-29T11:29:03.562Z,1443526143.562 [DeadReckonUsingMultipleVelocitySources](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T11:29:03.563Z,1443526143.563 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T11:29:12.695Z,1443526152.695 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T11:29:13.043Z,1443526153.043 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T11:29:13.167Z,1443526153.167 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T11:29:13.568Z,1443526153.568 [DataOverHttps](INFO): setting available, lastComms_.elapsed()=0.003000
2015-09-29T11:29:13.572Z,1443526153.572 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T11:29:13.966Z,1443526153.966 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T11:29:14.366Z,1443526154.366 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T11:29:14.765Z,1443526154.765 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T11:29:15.165Z,1443526155.165 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T11:29:15.565Z,1443526155.565 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T11:29:15.965Z,1443526155.965 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T11:29:16.365Z,1443526156.365 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T11:29:16.770Z,1443526156.770 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T11:29:17.170Z,1443526157.170 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T11:29:17.568Z,1443526157.568 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T11:29:17.970Z,1443526157.970 [NAL9602](INFO): No messages in MT queue
2015-09-29T11:29:17.971Z,1443526157.971 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T11:29:18.370Z,1443526158.370 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T11:29:18.769Z,1443526158.769 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T11:29:19.170Z,1443526159.170 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T11:29:19.571Z,1443526159.571 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T11:29:19.974Z,1443526159.974 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T11:29:20.370Z,1443526160.370 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T11:29:20.767Z,1443526160.767 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T11:29:21.165Z,1443526161.165 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T11:29:21.564Z,1443526161.564 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T11:29:21.978Z,1443526161.978 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T11:29:22.374Z,1443526162.374 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T11:29:22.775Z,1443526162.775 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T11:29:22.789Z,1443526162.789 [SBIT](IMPORTANT): Beginning Startup BIT
2015-09-29T11:29:23.165Z,1443526163.165 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T11:29:23.566Z,1443526163.566 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T11:29:23.966Z,1443526163.966 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T11:29:24.365Z,1443526164.365 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T11:29:24.765Z,1443526164.765 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T11:29:25.165Z,1443526165.165 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T11:29:25.566Z,1443526165.566 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T11:29:25.965Z,1443526165.965 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T11:29:26.365Z,1443526166.365 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T11:29:26.765Z,1443526166.765 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T11:29:27.165Z,1443526167.165 [D