2015-09-29T11:13:08.444Z,1443525188.444 [Supervisor](DEBUG): Initializing supervisor.
2015-09-29T11:13:08.447Z,1443525188.447 [SyncHandler](DEBUG): Created PCaller Thread at 4034C4E0
2015-09-29T11:13:08.447Z,1443525188.447 [SyncHandler](INFO): Protected caller Thread ID is 761
2015-09-29T11:13:08.448Z,1443525188.448 [ComponentRegistry](DEBUG): Component "controlThread" handled in its own thread.
2015-09-29T11:13:08.451Z,1443525188.451 [controlThread ThreadHandler](DEBUG): Created PCaller Thread at 4037C4E0
2015-09-29T11:13:08.451Z,1443525188.451 [controlThread ThreadHandler](INFO): Protected caller Thread ID is 762
2015-09-29T11:13:08.454Z,1443525188.454 [ComponentRegistry](DEBUG): SyncComponent "CycleStarter" handled in the control thread.
2015-09-29T11:13:08.466Z,1443525188.466 [ComponentRegistry](DEBUG): Component "CommandLine" handled in its own thread.
2015-09-29T11:13:08.471Z,1443525188.471 [CommandLine ThreadHandler](DEBUG): Created PCaller Thread at 403AC4E0
2015-09-29T11:13:08.471Z,1443525188.471 [CommandLine ThreadHandler](INFO): Protected caller Thread ID is 763
2015-09-29T11:13:08.472Z,1443525188.472 [ComponentRegistry](DEBUG): Component "logger" handled in its own thread.
2015-09-29T11:13:08.475Z,1443525188.475 [logger ThreadHandler](DEBUG): Created PCaller Thread at 403DC4E0
2015-09-29T11:13:08.475Z,1443525188.475 [logger ThreadHandler](INFO): Protected caller Thread ID is 764
2015-09-29T11:13:08.477Z,1443525188.477 [ComponentRegistry](DEBUG): SyncComponent "LogSplitter" handled in the control thread.
2015-09-29T11:13:08.477Z,1443525188.477 [Supervisor](INFO): Looking for Config files in directory: Config/
2015-09-29T11:13:08.481Z,1443525188.481 [Supervisor](INFO): Opening Config file at: Config/Control.cfg
2015-09-29T11:13:08.881Z,1443525188.881 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Control
2015-09-29T11:13:08.883Z,1443525188.883 [Supervisor](INFO): Opening Config file at: Config/BIT.cfg
2015-09-29T11:13:09.075Z,1443525189.075 [ComponentRegistry](DEBUG): Loaded Config Component "Config/BIT
2015-09-29T11:13:09.077Z,1443525189.077 [Supervisor](INFO): Opening Config file at: Config/Derivation.cfg
2015-09-29T11:13:09.223Z,1443525189.223 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Derivation
2015-09-29T11:13:09.224Z,1443525189.224 [Supervisor](INFO): Opening Config file at: Config/Estimation.cfg
2015-09-29T11:13:09.374Z,1443525189.374 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Estimation
2015-09-29T11:13:09.375Z,1443525189.375 [Supervisor](INFO): Opening Config file at: Config/Guidance.cfg
2015-09-29T11:13:09.470Z,1443525189.470 [Supervisor](INFO): Opening Config file at: Config/Navigation.cfg
2015-09-29T11:13:09.695Z,1443525189.695 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Navigation
2015-09-29T11:13:09.696Z,1443525189.696 [Supervisor](INFO): Opening Config file at: Config/Sample.cfg
2015-09-29T11:13:09.791Z,1443525189.791 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Sample
2015-09-29T11:13:09.792Z,1443525189.792 [Supervisor](INFO): Opening Config file at: Config/Science.cfg
2015-09-29T11:13:10.112Z,1443525190.112 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Science
2015-09-29T11:13:10.112Z,1443525190.112 [Supervisor](INFO): Opening Config file at: Config/Sensor.cfg
2015-09-29T11:13:10.519Z,1443525190.519 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Sensor
2015-09-29T11:13:10.520Z,1443525190.520 [Supervisor](INFO): Opening Config file at: Config/Servo.cfg
2015-09-29T11:13:10.892Z,1443525190.892 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Servo
2015-09-29T11:13:10.893Z,1443525190.893 [Supervisor](INFO): Opening Config file at: Config/Simulator.cfg
2015-09-29T11:13:11.504Z,1443525191.504 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Simulator
2015-09-29T11:13:11.505Z,1443525191.505 [Supervisor](INFO): Opening Config file at: Config/logger.cfg
2015-09-29T11:13:11.740Z,1443525191.740 [ComponentRegistry](DEBUG): Loaded Config Component "Config/logger
2015-09-29T11:13:11.740Z,1443525191.740 [Supervisor](INFO): Opening Config file at: Config/secure.cfg
2015-09-29T11:13:11.863Z,1443525191.863 [ComponentRegistry](DEBUG): Loaded Config Component "Config/secure
2015-09-29T11:13:11.864Z,1443525191.864 [Supervisor](INFO): Opening Config file at: Config/vehicle.cfg
2015-09-29T11:13:12.404Z,1443525192.404 [ComponentRegistry](DEBUG): Loaded Config Component "Config/vehicle
2015-09-29T11:13:12.405Z,1443525192.405 [Supervisor](INFO): Opening Config file at: Config/workSite.cfg
2015-09-29T11:13:12.527Z,1443525192.527 [ComponentRegistry](DEBUG): Loaded Config Component "Config/workSite
2015-09-29T11:13:12.529Z,1443525192.529 [Supervisor](INFO): Looking for Config files in directory: Config/(none)/
2015-09-29T11:13:12.529Z,1443525192.529 [Supervisor](FAULT): Ignoring configuration overrides from Data/persisted.cfg
2015-09-29T11:13:12.534Z,1443525192.534 [Module Loader](DEBUG): Loading Module at Modules/Control.so
2015-09-29T11:13:12.608Z,1443525192.608 [VerticalControl](DEBUG): Construct VerticalControl.
2015-09-29T11:13:12.743Z,1443525192.743 [VerticalControl] Loaded
2015-09-29T11:13:12.743Z,1443525192.743 [ComponentRegistry](DEBUG): SyncComponent "VerticalControl" handled in the control thread.
2015-09-29T11:13:12.744Z,1443525192.744 [HorizontalControl](DEBUG): Construct HorizontalControl.
2015-09-29T11:13:12.825Z,1443525192.825 [HorizontalControl] Loaded
2015-09-29T11:13:12.825Z,1443525192.825 [ComponentRegistry](DEBUG): SyncComponent "HorizontalControl" handled in the control thread.
2015-09-29T11:13:12.826Z,1443525192.826 [SpeedControl](DEBUG): Construct SpeedControl.
2015-09-29T11:13:12.832Z,1443525192.832 [SpeedControl] Loaded
2015-09-29T11:13:12.832Z,1443525192.832 [ComponentRegistry](DEBUG): SyncComponent "SpeedControl" handled in the control thread.
2015-09-29T11:13:12.833Z,1443525192.833 [LoopControl](DEBUG): Construct LoopControl.
2015-09-29T11:13:12.833Z,1443525192.833 [LoopControl] Loaded
2015-09-29T11:13:12.833Z,1443525192.833 [ComponentRegistry](DEBUG): SyncComponent "LoopControl" handled in the control thread.
2015-09-29T11:13:12.834Z,1443525192.834 [Module Loader](DEBUG): Loaded Module: Control (Contains the Control components, such as Depth, Heading, and Speed Control)
2015-09-29T11:13:12.839Z,1443525192.839 [Module Loader](DEBUG): Loading Module at Modules/BIT.so
2015-09-29T11:13:12.998Z,1443525192.998 [SBIT](DEBUG): Construct Startup Built In Test.
2015-09-29T11:13:13.010Z,1443525193.010 [SBIT] Loaded
2015-09-29T11:13:13.011Z,1443525193.011 [ComponentRegistry](DEBUG): SyncComponent "SBIT" handled in the control thread.
2015-09-29T11:13:13.012Z,1443525193.012 [IBIT](DEBUG): Construct Initiated Built In Test.
2015-09-29T11:13:13.045Z,1443525193.045 [IBIT] Loaded
2015-09-29T11:13:13.046Z,1443525193.046 [ComponentRegistry](DEBUG): SyncComponent "IBIT" handled in the control thread.
2015-09-29T11:13:13.048Z,1443525193.048 [CBIT](DEBUG): Construct Continuous Built In Test.
2015-09-29T11:13:13.203Z,1443525193.203 [CBIT] Loaded
2015-09-29T11:13:13.203Z,1443525193.203 [ComponentRegistry](DEBUG): SyncComponent "CBIT" handled in the control thread.
2015-09-29T11:13:13.204Z,1443525193.204 [Module Loader](DEBUG): Loaded Module: BIT (Contains the BuiltInTest components, such as C Built In Test)
2015-09-29T11:13:13.204Z,1443525193.204 [Module Loader](DEBUG): Loading Module at Modules/Derivation.so
2015-09-29T11:13:13.245Z,1443525193.245 [DepthRateCalculator] Loaded
2015-09-29T11:13:13.246Z,1443525193.246 [ComponentRegistry](DEBUG): SyncComponent "DepthRateCalculator" handled in the control thread.
2015-09-29T11:13:13.251Z,1443525193.251 [PitchRateCalculator] Loaded
2015-09-29T11:13:13.252Z,1443525193.252 [ComponentRegistry](DEBUG): SyncComponent "PitchRateCalculator" handled in the control thread.
2015-09-29T11:13:13.267Z,1443525193.267 [SpeedCalculator] Loaded
2015-09-29T11:13:13.267Z,1443525193.267 [ComponentRegistry](DEBUG): SyncComponent "SpeedCalculator" handled in the control thread.
2015-09-29T11:13:13.285Z,1443525193.285 [TempGradientCalculator] Loaded
2015-09-29T11:13:13.285Z,1443525193.285 [ComponentRegistry](DEBUG): SyncComponent "TempGradientCalculator" handled in the control thread.
2015-09-29T11:13:13.302Z,1443525193.302 [VerticalTemperatureHomogeneityIndexCalculator] Loaded
2015-09-29T11:13:13.306Z,1443525193.306 [ComponentRegistry](DEBUG): SyncComponent "VerticalTemperatureHomogeneityIndexCalculator" handled in the control thread.
2015-09-29T11:13:13.312Z,1443525193.312 [YawRateCalculator] Loaded
2015-09-29T11:13:13.312Z,1443525193.312 [ComponentRegistry](DEBUG): SyncComponent "YawRateCalculator" handled in the control thread.
2015-09-29T11:13:13.313Z,1443525193.313 [Module Loader](DEBUG): Loaded Module: Derivation (Contains the base derivation components)
2015-09-29T11:13:13.313Z,1443525193.313 [Module Loader](DEBUG): Loading Module at Modules/Estimation.so
2015-09-29T11:13:13.433Z,1443525193.433 [StratificationFrontDetector](INFO): threshold set to: 0.399988 degC
2015-09-29T11:13:13.433Z,1443525193.433 [StratificationFrontDetector](DEBUG): (re)initializing
2015-09-29T11:13:13.433Z,1443525193.433 [StratificationFrontDetector] Loaded
2015-09-29T11:13:13.433Z,1443525193.433 [ComponentRegistry](DEBUG): SyncComponent "StratificationFrontDetector" handled in the control thread.
2015-09-29T11:13:13.434Z,1443525193.434 [Module Loader](DEBUG): Loaded Module: Estimation (Contains the base estimation components)
2015-09-29T11:13:13.439Z,1443525193.439 [Module Loader](DEBUG): Loading Module at Modules/Guidance.so
2015-09-29T11:13:13.732Z,1443525193.732 [Module Loader](DEBUG): Loaded Module: Guidance (Contains behaviors and commands)
2015-09-29T11:13:13.732Z,1443525193.732 [Module Loader](DEBUG): Loading Module at Modules/Navigation.so
2015-09-29T11:13:13.865Z,1443525193.865 [DeadReckonUsingMultipleVelocitySources] Loaded
2015-09-29T11:13:13.866Z,1443525193.866 [ComponentRegistry](DEBUG): SyncComponent "DeadReckonUsingMultipleVelocitySources" handled in the control thread.
2015-09-29T11:13:13.927Z,1443525193.927 [DeadReckonUsingSpeedCalculator] Loaded
2015-09-29T11:13:13.927Z,1443525193.927 [ComponentRegistry](DEBUG): SyncComponent "DeadReckonUsingSpeedCalculator" handled in the control thread.
2015-09-29T11:13:13.949Z,1443525193.949 [NavChart] Loaded
2015-09-29T11:13:13.949Z,1443525193.949 [ComponentRegistry](DEBUG): SyncComponent "NavChart" handled in the control thread.
2015-09-29T11:13:13.954Z,1443525193.954 [UniversalFixResidualReporter] Loaded
2015-09-29T11:13:13.955Z,1443525193.955 [ComponentRegistry](DEBUG): SyncComponent "UniversalFixResidualReporter" handled in the control thread.
2015-09-29T11:13:13.955Z,1443525193.955 [Module Loader](DEBUG): Loaded Module: Navigation (Contains the base navigation components)
2015-09-29T11:13:13.956Z,1443525193.956 [Module Loader](DEBUG): Loading Module at Modules/Sample.so
2015-09-29T11:13:13.964Z,1443525193.964 [Module Loader](DEBUG): Loaded Module: Sample (This is a Sample Module of Sample Components)
2015-09-29T11:13:13.965Z,1443525193.965 [Module Loader](DEBUG): Loading Module at Modules/Science.so
2015-09-29T11:13:14.264Z,1443525194.264 [CTD_NeilBrown] Loaded
2015-09-29T11:13:14.264Z,1443525194.264 [ComponentRegistry](DEBUG): Component "CTD_NeilBrown" handled in its own thread.
2015-09-29T11:13:14.267Z,1443525194.267 [CTD_NeilBrown ThreadHandler](DEBUG): Created PCaller Thread at 4059D4E0
2015-09-29T11:13:14.267Z,1443525194.267 [CTD_NeilBrown ThreadHandler](INFO): Protected caller Thread ID is 810
2015-09-29T11:13:14.280Z,1443525194.280 [ISUS] Loaded
2015-09-29T11:13:14.280Z,1443525194.280 [ComponentRegistry](DEBUG): SyncComponent "ISUS" handled in the control thread.
2015-09-29T11:13:14.299Z,1443525194.299 [PAR_Licor] Loaded
2015-09-29T11:13:14.299Z,1443525194.299 [ComponentRegistry](DEBUG): SyncComponent "PAR_Licor" handled in the control thread.
2015-09-29T11:13:14.355Z,1443525194.355 [WetLabsBB2FL] Loaded
2015-09-29T11:13:14.356Z,1443525194.356 [ComponentRegistry](DEBUG): Component "WetLabsBB2FL" handled in its own thread.
2015-09-29T11:13:14.359Z,1443525194.359 [WetLabsBB2FL ThreadHandler](DEBUG): Created PCaller Thread at 405CD4E0
2015-09-29T11:13:14.359Z,1443525194.359 [WetLabsBB2FL ThreadHandler](INFO): Protected caller Thread ID is 811
2015-09-29T11:13:14.359Z,1443525194.359 [Module Loader](DEBUG): Loaded Module: Science (Contains the science components)
2015-09-29T11:13:14.360Z,1443525194.360 [Module Loader](DEBUG): Loading Module at Modules/Sensor.so
2015-09-29T11:13:15.085Z,1443525195.085 [AHRS_sp3003D] Loaded
2015-09-29T11:13:15.085Z,1443525195.085 [ComponentRegistry](DEBUG): SyncComponent "AHRS_sp3003D" handled in the control thread.
2015-09-29T11:13:15.291Z,1443525195.291 [DataOverHttps] Loaded
2015-09-29T11:13:15.292Z,1443525195.292 [ComponentRegistry](DEBUG): SyncComponent "DataOverHttps" handled in the control thread.
2015-09-29T11:13:15.309Z,1443525195.309 [Depth_Keller] Loaded
2015-09-29T11:13:15.310Z,1443525195.310 [ComponentRegistry](DEBUG): SyncComponent "Depth_Keller" handled in the control thread.
2015-09-29T11:13:15.315Z,1443525195.315 [DropWeight] Loaded
2015-09-29T11:13:15.315Z,1443525195.315 [ComponentRegistry](DEBUG): SyncComponent "DropWeight" handled in the control thread.
2015-09-29T11:13:15.473Z,1443525195.473 [DVL_micro] Loaded
2015-09-29T11:13:15.473Z,1443525195.473 [ComponentRegistry](DEBUG): SyncComponent "DVL_micro" handled in the control thread.
2015-09-29T11:13:15.577Z,1443525195.577 [NAL9602] Loaded
2015-09-29T11:13:15.578Z,1443525195.578 [ComponentRegistry](DEBUG): SyncComponent "NAL9602" handled in the control thread.
2015-09-29T11:13:15.629Z,1443525195.629 [Onboard] Loaded
2015-09-29T11:13:15.629Z,1443525195.629 [ComponentRegistry](DEBUG): SyncComponent "Onboard" handled in the control thread.
2015-09-29T11:13:15.641Z,1443525195.641 [Radio_Surface] Loaded
2015-09-29T11:13:15.641Z,1443525195.641 [ComponentRegistry](DEBUG): Component "Radio_Surface" handled in its own thread.
2015-09-29T11:13:15.643Z,1443525195.643 [Radio_Surface ThreadHandler](DEBUG): Created PCaller Thread at 408114E0
2015-09-29T11:13:15.643Z,1443525195.643 [Radio_Surface ThreadHandler](INFO): Protected caller Thread ID is 812
2015-09-29T11:13:15.803Z,1443525195.803 [DAT] Loaded
2015-09-29T11:13:15.803Z,1443525195.803 [ComponentRegistry](DEBUG): SyncComponent "DAT" handled in the control thread.
2015-09-29T11:13:15.810Z,1443525195.810 [SCPI] Loaded
2015-09-29T11:13:15.810Z,1443525195.810 [ComponentRegistry](DEBUG): SyncComponent "SCPI" handled in the control thread.
2015-09-29T11:13:15.811Z,1443525195.811 [Module Loader](DEBUG): Loaded Module: Sensor (Contains the sensor components)
2015-09-29T11:13:15.812Z,1443525195.812 [Module Loader](DEBUG): Loading Module at Modules/Servo.so
2015-09-29T11:13:15.942Z,1443525195.942 [BuoyancyServo] Loaded
2015-09-29T11:13:15.942Z,1443525195.942 [ComponentRegistry](DEBUG): SyncComponent "BuoyancyServo" handled in the control thread.
2015-09-29T11:13:15.959Z,1443525195.959 [ElevatorServo] Loaded
2015-09-29T11:13:15.959Z,1443525195.959 [ComponentRegistry](DEBUG): SyncComponent "ElevatorServo" handled in the control thread.
2015-09-29T11:13:15.971Z,1443525195.971 [MassServo] Loaded
2015-09-29T11:13:15.971Z,1443525195.971 [ComponentRegistry](DEBUG): SyncComponent "MassServo" handled in the control thread.
2015-09-29T11:13:15.983Z,1443525195.983 [RudderServo] Loaded
2015-09-29T11:13:15.983Z,1443525195.983 [ComponentRegistry](DEBUG): SyncComponent "RudderServo" handled in the control thread.
2015-09-29T11:13:15.999Z,1443525195.999 [ThrusterServo] Loaded
2015-09-29T11:13:15.999Z,1443525195.999 [ComponentRegistry](DEBUG): SyncComponent "ThrusterServo" handled in the control thread.
2015-09-29T11:13:15.000Z,1443525196.000 [Module Loader](DEBUG): Loaded Module: Servo (This is the module containing motor controllers)
2015-09-29T11:13:16.000Z,1443525196.000 [Module Loader](DEBUG): Loading Module at Modules/Simulator.so
2015-09-29T11:13:16.203Z,1443525196.203 [InternalSim] Loaded
2015-09-29T11:13:16.203Z,1443525196.203 [ComponentRegistry](DEBUG): SyncComponent "InternalSim" handled in the control thread.
2015-09-29T11:13:16.204Z,1443525196.204 [Module Loader](DEBUG): Loaded Module: Simulator (This is the module containing the Simulator)
2015-09-29T11:13:16.205Z,1443525196.205 [Module Loader](DEBUG): Loading Module at Modules/Trigger.so
2015-09-29T11:13:16.248Z,1443525196.248 [Module Loader](DEBUG): Loaded Module: Trigger (Contains triggers for use in missions)
2015-09-29T11:13:16.252Z,1443525196.252 [ComponentRegistry](DEBUG): SyncComponent "MissionManager" handled in the control thread.
2015-09-29T11:13:16.253Z,1443525196.253 [ComponentRegistry](DEBUG): SyncComponent "Reporter" handled in the control thread.
2015-09-29T11:13:16.259Z,1443525196.259 [ComponentRegistry](DEBUG): Component "NavChartDb" handled in its own thread.
2015-09-29T11:13:16.263Z,1443525196.263 [NavChartDb ThreadHandler](DEBUG): Created PCaller Thread at 408BF4E0
2015-09-29T11:13:16.263Z,1443525196.263 [NavChartDb ThreadHandler](INFO): Protected caller Thread ID is 813
2015-09-29T11:13:16.268Z,1443525196.268 [Supervisor](INFO): Main Thread ID is 760
2015-09-29T11:13:16.268Z,1443525196.268 [Supervisor](DEBUG): Running supervisor.
2015-09-29T11:13:16.269Z,1443525196.269 [CommandLine ThreadHandler](INFO): Handler Thread ID is 814
2015-09-29T11:13:16.275Z,1443525196.275 [controlThread ThreadHandler](INFO): Handler Thread ID is 815
2015-09-29T11:13:16.276Z,1443525196.276 [controlThread](DEBUG): Initializing ControlThread
2015-09-29T11:13:16.276Z,1443525196.276 [VerticalControl](DEBUG): Initialize VerticalControlComponent.
2015-09-29T11:13:16.278Z,1443525196.278 [HorizontalControl](DEBUG): Initialize HorizontalControlComponent.
2015-09-29T11:13:16.279Z,1443525196.279 [SpeedControl](DEBUG): Initialize SpeedControlComponent.
2015-09-29T11:13:16.280Z,1443525196.280 [LoopControl](DEBUG): Initialize LoopControlComponent.
2015-09-29T11:13:16.280Z,1443525196.280 [SBIT](INFO): Initialize SBIT Component.
2015-09-29T11:13:16.280Z,1443525196.280 [SBIT](IMPORTANT): Tethys CM Info: SVN revision:12634
2015-09-29T11:13:16.282Z,1443525196.282 [SBIT](INFO): Kernel Reporting Different Release From Configuration.
Kernel Expected: 2.6.32-45-generic-pae
Kernel Reported: 2.6.27.8
2015-09-29T11:13:16.282Z,1443525196.282 [SBIT](INFO): Kernel Reporting Different Version From Configuration.
Kernel Expected: #102-Ubuntu SMP Wed Jan 2 22:10:16 UTC 2013
Kernel Reported: #641 PREEMPT Mon Sep 28 16:45:10 PDT 2015
2015-09-29T11:13:16.283Z,1443525196.283 [SBIT](INFO): Beginning SBIT in 20.000000 seconds.
2015-09-29T11:13:16.284Z,1443525196.284 [IBIT](INFO): Initialize IBIT Component.
2015-09-29T11:13:16.284Z,1443525196.284 [CBIT](DEBUG): Initialize CBIT Component.
2015-09-29T11:13:16.285Z,1443525196.285 [CBIT](FAULT): LAST RESTART WAS UNINTENTIONAL.
2015-09-29T11:13:16.285Z,1443525196.285 [CBIT](INFO): Last reboot was NOT due to watchdog timer.
2015-09-29T11:13:16.285Z,1443525196.285 [DepthRateCalculator](DEBUG): Initializing DepthRateCalculator.
2015-09-29T11:13:16.286Z,1443525196.286 [PitchRateCalculator](DEBUG): Initializing PitchRateCalculator.
2015-09-29T11:13:16.286Z,1443525196.286 [SpeedCalculator](DEBUG): Initializing SpeedCalculator.
2015-09-29T11:13:16.286Z,1443525196.286 [TempGradientCalculator](DEBUG): Initializing TempGradientCalculator.
2015-09-29T11:13:16.287Z,1443525196.287 [VerticalTemperatureHomogeneityIndexCalculator](DEBUG): (re)initializing
2015-09-29T11:13:16.287Z,1443525196.287 [YawRateCalculator](DEBUG): Initializing YawRateCalculator.
2015-09-29T11:13:16.288Z,1443525196.288 [DeadReckonUsingMultipleVelocitySources](DEBUG): Initializing DeadReckonUsingMultipleVelocitySources component.
2015-09-29T11:13:16.289Z,1443525196.289 [DeadReckonUsingMultipleVelocitySources](INFO): Will consider orientation measurement stale after 120s.
2015-09-29T11:13:16.289Z,1443525196.289 [DeadReckonUsingMultipleVelocitySources](INFO): Will consider velocity measurement stale after 20s.
2015-09-29T11:13:16.289Z,1443525196.289 [DeadReckonUsingSpeedCalculator](DEBUG): Initializing DeadReckonUsingSpeedCalculator component.
2015-09-29T11:13:16.290Z,1443525196.290 [DeadReckonUsingSpeedCalculator](INFO): Will consider orientation measurement stale after 120s.
2015-09-29T11:13:16.290Z,1443525196.290 [DeadReckonUsingSpeedCalculator](INFO): Will consider velocity measurement stale after 20s.
2015-09-29T11:13:16.291Z,1443525196.291 [NavChart](DEBUG): Initialize NavChart Navigation.
2015-09-29T11:13:16.291Z,1443525196.291 [UniversalFixResidualReporter](DEBUG): Initializing UniversalFixResidualReporter component.
2015-09-29T11:13:16.296Z,1443525196.296 [InternalSim](DEBUG):  InternalSim initializing...
2015-09-29T11:13:16.327Z,1443525196.327 [logger ThreadHandler](INFO): Handler Thread ID is 816
2015-09-29T11:13:16.431Z,1443525196.431 [CTD_NeilBrown ThreadHandler](INFO): Handler Thread ID is 817
2015-09-29T11:13:16.432Z,1443525196.432 [WetLabsBB2FL ThreadHandler](INFO): Handler Thread ID is 818
2015-09-29T11:13:16.443Z,1443525196.443 [Radio_Surface ThreadHandler](INFO): Handler Thread ID is 819
2015-09-29T11:13:16.505Z,1443525196.505 [NavChartDb ThreadHandler](INFO): Handler Thread ID is 820
2015-09-29T11:13:16.512Z,1443525196.512 [NavChartDb](INFO): Looking for Electronic Nav Chart files in directory: Resources
2015-09-29T11:13:16.514Z,1443525196.514 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US1WC07M.000
2015-09-29T11:13:16.515Z,1443525196.515 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US2WC11M.000
2015-09-29T11:13:16.515Z,1443525196.515 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US3CA52M.000
2015-09-29T11:13:16.515Z,1443525196.515 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US4CA60M.000
2015-09-29T11:13:16.515Z,1443525196.515 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA50M.000
2015-09-29T11:13:16.516Z,1443525196.516 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA61M.000
2015-09-29T11:13:16.516Z,1443525196.516 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA62M.000
2015-09-29T11:13:16.516Z,1443525196.516 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA83M.000
2015-09-29T11:13:16.567Z,1443525196.567 [MissionManager](INFO): Loading Mission: Missions/Startup.xml
2015-09-29T11:13:16.597Z,1443525196.597 [Startup:A.GoToSurface](DEBUG): Construct GoToSurface.
2015-09-29T11:13:16.615Z,1443525196.615 [MissionManager](DEBUG): 
<?xml version="1.0" encoding="UTF-8"?>
<Mission xmlns="Tethys"
       xmlns:Control="Tethys/Control"
       xmlns:Guidance="Tethys/Guidance" 
       xmlns:Units="Tethys/Units"
       xmlns:Universal="Tethys/Universal"
       xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
       xsi:schemaLocation="Tethys http://okeanids.mbari.org/tethys/Xml/Tethys.xsd
                           Tethys/Control http://okeanids.mbari.org/tethys/Xml/Control.xsd
                           Tethys/Guidance http://okeanids.mbari.org/tethys/Xml/Guidance.xsd
                           Tethys/Units http://okeanids.mbari.org/tethys/Xml/Units.xsd
                           Tethys/Universal http://okeanids.mbari.org/tethys/Xml/Universal.xsd"
       Id="Startup">

    <Guidance:GoToSurface>
        <Progression/>
    </Guidance:GoToSurface>

    <Aggregate Id="StartupSatComms">

        <Sequence/>

        <ReadDatum>
            <Timeout Duration="P1M" />
            <Universal:latitude_fix/>
        </ReadDatum>

        <ReadDatum>
            <Timeout Duration="P1M" />
            <Universal:platform_communications/>
        </ReadDatum>

    </Aggregate>

</Mission>


2015-09-29T11:13:16.616Z,1443525196.616 [MissionManager](INFO): Loading Mission: Missions/Default.xml
2015-09-29T11:13:16.689Z,1443525196.689 [MissionManager](INFO): DefineArg Default.ElapsedSinceDefaultStarted = 0.000000 min
2015-09-29T11:13:16.706Z,1443525196.706 [Default:A.GoToSurface](DEBUG): Construct GoToSurface.
2015-09-29T11:13:16.734Z,1443525196.734 [Default:CheckIn:Read_Iridium:A_Timeout:A.Execute](DEBUG): Construct Execute.
2015-09-29T11:13:16.737Z,1443525196.737 [Default:CheckIn:C.Wait](DEBUG): Construct Wait.
2015-09-29T11:13:16.767Z,1443525196.767 [Default:D.Execute](DEBUG): Construct Execute.
2015-09-29T11:13:16.770Z,1443525196.770 [MissionManager](DEBUG): 
<?xml version="1.0" encoding="UTF-8"?>
<Mission xmlns="Tethys"
xmlns:Guidance="Tethys/Guidance"
xmlns:Units="Tethys/Units"
xmlns:Universal="Tethys/Universal"
xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
xsi:schemaLocation="Tethys http://okeanids.mbari.org/tethys/Xml/Tethys.xsd
Tethys/Guidance http://okeanids.mbari.org/tethys/Xml/Guidance.xsd
Tethys/Units http://okeanids.mbari.org/tethys/Xml/Units.xsd
Tethys/Universal http://okeanids.mbari.org/tethys/Xml/Universal.xsd"
Id="Default">

    <DefineArg Name="ElapsedSinceDefaultStarted"><Units:minute/><Value>0</Value></DefineArg>

    <Guidance:GoToSurface>
        <Progression/>
    </Guidance:GoToSurface>

    <Aggregate Id="CheckIn">

        <Sequence Repeat="288"/>

        <ReadDatum Id="Read_GPS">
            <Sequence/>
            <Timeout Duration="P5M"/>
            <Universal:time_fix/>
        </ReadDatum>

        <ReadDatum Id="Read_Iridium">
            <Sequence/>
            <Timeout Duration="P2H">
                <Guidance:Execute>
                    <Sequence/>
                    <Setting><Guidance:Execute.command/><String>Burn 300</String></Setting>
                </Guidance:Execute>
                <Syslog Severity="Critical">Dropped weight due to communications timeout.</Syslog>
            </Timeout>
            <Universal:platform_communications/>
        </ReadDatum>

        <Guidance:Wait>
            <Sequence/>
            <Setting><Guidance:Wait.duration/><Units:minute/><Value>5</Value></Setting>
        </Guidance:Wait>

        <Assign><Sequence/><Arg Name="ElapsedSinceDefaultStarted"/><Elapsed><Universal:mission_started/></Elapsed></Assign>

        <Syslog Severity="Important">Default mission has been running for <Arg Name="ElapsedSinceDefaultStarted"/><Units:minute/></Syslog>

    </Aggregate>

    <Syslog Severity="Important">Restarting logs and Default mission.</Syslog>

    <Guidance:Execute>
        <Sequence/>
        <Setting><Guidance:Execute.command/><String>restart logs</String></Setting>
    </Guidance:Execute>

</Mission>


2015-09-29T11:13:16.790Z,1443525196.790 [controlThread](DEBUG): Component order: CycleStarter,InternalSim,ISUS,PAR_Licor,AHRS_sp3003D,DataOverHttps,Depth_Keller,DropWeight,DVL_micro,NAL9602,Onboard,DAT,SCPI,PAR_Licor,Depth_Keller,DepthRateCalculator,PitchRateCalculator,SpeedCalculator,TempGradientCalculator,VerticalTemperatureHomogeneityIndexCalculator,YawRateCalculator,StratificationFrontDetector,DeadReckonUsingMultipleVelocitySources,DeadReckonUsingSpeedCalculator,NavChart,UniversalFixResidualReporter,MissionManager,VerticalControl,HorizontalControl,SpeedControl,LoopControl,BuoyancyServo,ElevatorServo,MassServo,RudderServo,ThrusterServo,SBIT,IBIT,CBIT,Reporter,LogSplitter,
2015-09-29T11:13:16.982Z,1443525196.982 [DVL_micro](INFO): Initializing
2015-09-29T11:13:17.140Z,1443525197.140 [DeadReckonUsingMultipleVelocitySources](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T11:13:17.171Z,1443525197.171 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T11:13:17.291Z,1443525197.291 [BuoyancyServo](DEBUG): Initializing BuoyancyServo.
2015-09-29T11:13:17.303Z,1443525197.303 [ElevatorServo](DEBUG): Initializing ElevatorServo.
2015-09-29T11:13:17.315Z,1443525197.315 [MassServo](DEBUG): Initializing MassServo.
2015-09-29T11:13:17.327Z,1443525197.327 [RudderServo](DEBUG): Initializing RudderServo.
2015-09-29T11:13:17.336Z,1443525197.336 [ThrusterServo](DEBUG): Initializing ThrusterServo.
2015-09-29T11:13:17.581Z,1443525197.581 [DeadReckonUsingMultipleVelocitySources](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T11:13:17.582Z,1443525197.582 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T11:13:26.677Z,1443525206.677 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T11:13:26.991Z,1443525206.991 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T11:13:27.133Z,1443525207.133 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T11:13:27.533Z,1443525207.533 [DataOverHttps](INFO): setting available, lastComms_.elapsed()=0.003100
2015-09-29T11:13:27.537Z,1443525207.537 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T11:13:27.933Z,1443525207.933 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T11:13:28.332Z,1443525208.332 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T11:13:28.732Z,1443525208.732 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T11:13:29.133Z,1443525209.133 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T11:13:29.531Z,1443525209.531 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T11:13:29.932Z,1443525209.932 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T11:13:30.332Z,1443525210.332 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T11:13:30.732Z,1443525210.732 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T11:13:31.132Z,1443525211.132 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T11:13:31.531Z,1443525211.531 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T11:13:31.931Z,1443525211.931 [NAL9602](INFO): No messages in MT queue
2015-09-29T11:13:31.932Z,1443525211.932 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T11:13:32.332Z,1443525212.332 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T11:13:32.735Z,1443525212.735 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T11:13:33.134Z,1443525213.134 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T11:13:33.536Z,1443525213.536 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T11:13:33.934Z,1443525213.934 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T11:13:34.332Z,1443525214.332 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T11:13:34.737Z,1443525214.737 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T11:13:35.136Z,1443525215.136 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T11:13:35.537Z,1443525215.537 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T11:13:35.937Z,1443525215.937 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T11:13:36.337Z,1443525216.337 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T11:13:36.731Z,1443525216.731 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T11:13:36.768Z,1443525216.768 [SBIT](IMPORTANT): Beginning Startup BIT
2015-09-29T11:13:37.131Z,1443525217.131 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T11:13:37.531Z,1443525217.531 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T11:13:37.932Z,1443525217.932 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T11:13:38.332Z,1443525218.332 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T11:13:38.732Z,1443525218.732 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T11:13:39.139Z,1443525219.139 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T11:13:39.533Z,1443525219.533 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T11:13:39.931Z,1443525219.931 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T11:13:40.332Z,1443525220.332 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T11:13:40.732Z,1443525220.732 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T11:13:41.139Z,1443525221.139 [D