2015-09-29T11:05:15.000Z,1443524715.000 [Supervisor](DEBUG): Initializing supervisor.
2015-09-29T11:05:15.004Z,1443524715.004 [SyncHandler](DEBUG): Created PCaller Thread at 4034C4E0
2015-09-29T11:05:15.004Z,1443524715.004 [SyncHandler](INFO): Protected caller Thread ID is 761
2015-09-29T11:05:15.005Z,1443524715.005 [ComponentRegistry](DEBUG): Component "controlThread" handled in its own thread.
2015-09-29T11:05:15.008Z,1443524715.008 [controlThread ThreadHandler](DEBUG): Created PCaller Thread at 4037C4E0
2015-09-29T11:05:15.008Z,1443524715.008 [controlThread ThreadHandler](INFO): Protected caller Thread ID is 762
2015-09-29T11:05:15.011Z,1443524715.011 [ComponentRegistry](DEBUG): SyncComponent "CycleStarter" handled in the control thread.
2015-09-29T11:05:15.023Z,1443524715.023 [ComponentRegistry](DEBUG): Component "CommandLine" handled in its own thread.
2015-09-29T11:05:15.028Z,1443524715.028 [CommandLine ThreadHandler](DEBUG): Created PCaller Thread at 403AC4E0
2015-09-29T11:05:15.028Z,1443524715.028 [CommandLine ThreadHandler](INFO): Protected caller Thread ID is 763
2015-09-29T11:05:15.029Z,1443524715.029 [ComponentRegistry](DEBUG): Component "logger" handled in its own thread.
2015-09-29T11:05:15.032Z,1443524715.032 [logger ThreadHandler](DEBUG): Created PCaller Thread at 403DC4E0
2015-09-29T11:05:15.032Z,1443524715.032 [logger ThreadHandler](INFO): Protected caller Thread ID is 764
2015-09-29T11:05:15.034Z,1443524715.034 [ComponentRegistry](DEBUG): SyncComponent "LogSplitter" handled in the control thread.
2015-09-29T11:05:15.035Z,1443524715.035 [Supervisor](INFO): Looking for Config files in directory: Config/
2015-09-29T11:05:15.038Z,1443524715.038 [Supervisor](INFO): Opening Config file at: Config/Control.cfg
2015-09-29T11:05:15.439Z,1443524715.439 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Control
2015-09-29T11:05:15.441Z,1443524715.441 [Supervisor](INFO): Opening Config file at: Config/BIT.cfg
2015-09-29T11:05:15.635Z,1443524715.635 [ComponentRegistry](DEBUG): Loaded Config Component "Config/BIT
2015-09-29T11:05:15.637Z,1443524715.637 [Supervisor](INFO): Opening Config file at: Config/Derivation.cfg
2015-09-29T11:05:15.785Z,1443524715.785 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Derivation
2015-09-29T11:05:15.785Z,1443524715.785 [Supervisor](INFO): Opening Config file at: Config/Estimation.cfg
2015-09-29T11:05:15.937Z,1443524715.937 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Estimation
2015-09-29T11:05:15.937Z,1443524715.937 [Supervisor](INFO): Opening Config file at: Config/Guidance.cfg
2015-09-29T11:05:16.033Z,1443524716.033 [Supervisor](INFO): Opening Config file at: Config/Navigation.cfg
2015-09-29T11:05:16.256Z,1443524716.256 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Navigation
2015-09-29T11:05:16.257Z,1443524716.257 [Supervisor](INFO): Opening Config file at: Config/Sample.cfg
2015-09-29T11:05:16.352Z,1443524716.352 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Sample
2015-09-29T11:05:16.353Z,1443524716.353 [Supervisor](INFO): Opening Config file at: Config/Science.cfg
2015-09-29T11:05:16.673Z,1443524716.673 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Science
2015-09-29T11:05:16.673Z,1443524716.673 [Supervisor](INFO): Opening Config file at: Config/Sensor.cfg
2015-09-29T11:05:17.081Z,1443524717.081 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Sensor
2015-09-29T11:05:17.082Z,1443524717.082 [Supervisor](INFO): Opening Config file at: Config/Servo.cfg
2015-09-29T11:05:17.441Z,1443524717.441 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Servo
2015-09-29T11:05:17.443Z,1443524717.443 [Supervisor](INFO): Opening Config file at: Config/Simulator.cfg
2015-09-29T11:05:18.053Z,1443524718.053 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Simulator
2015-09-29T11:05:18.054Z,1443524718.054 [Supervisor](INFO): Opening Config file at: Config/logger.cfg
2015-09-29T11:05:18.293Z,1443524718.293 [ComponentRegistry](DEBUG): Loaded Config Component "Config/logger
2015-09-29T11:05:18.294Z,1443524718.294 [Supervisor](INFO): Opening Config file at: Config/secure.cfg
2015-09-29T11:05:18.411Z,1443524718.411 [ComponentRegistry](DEBUG): Loaded Config Component "Config/secure
2015-09-29T11:05:18.412Z,1443524718.412 [Supervisor](INFO): Opening Config file at: Config/vehicle.cfg
2015-09-29T11:05:18.936Z,1443524718.936 [ComponentRegistry](DEBUG): Loaded Config Component "Config/vehicle
2015-09-29T11:05:18.937Z,1443524718.937 [Supervisor](INFO): Opening Config file at: Config/workSite.cfg
2015-09-29T11:05:19.113Z,1443524719.113 [ComponentRegistry](DEBUG): Loaded Config Component "Config/workSite
2015-09-29T11:05:19.114Z,1443524719.114 [Supervisor](INFO): Looking for Config files in directory: Config/(none)/
2015-09-29T11:05:19.115Z,1443524719.115 [Supervisor](FAULT): Ignoring configuration overrides from Data/persisted.cfg
2015-09-29T11:05:19.119Z,1443524719.119 [Module Loader](DEBUG): Loading Module at Modules/Control.so
2015-09-29T11:05:19.194Z,1443524719.194 [VerticalControl](DEBUG): Construct VerticalControl.
2015-09-29T11:05:19.333Z,1443524719.333 [VerticalControl] Loaded
2015-09-29T11:05:19.333Z,1443524719.333 [ComponentRegistry](DEBUG): SyncComponent "VerticalControl" handled in the control thread.
2015-09-29T11:05:19.334Z,1443524719.334 [HorizontalControl](DEBUG): Construct HorizontalControl.
2015-09-29T11:05:19.415Z,1443524719.415 [HorizontalControl] Loaded
2015-09-29T11:05:19.415Z,1443524719.415 [ComponentRegistry](DEBUG): SyncComponent "HorizontalControl" handled in the control thread.
2015-09-29T11:05:19.416Z,1443524719.416 [SpeedControl](DEBUG): Construct SpeedControl.
2015-09-29T11:05:19.422Z,1443524719.422 [SpeedControl] Loaded
2015-09-29T11:05:19.422Z,1443524719.422 [ComponentRegistry](DEBUG): SyncComponent "SpeedControl" handled in the control thread.
2015-09-29T11:05:19.423Z,1443524719.423 [LoopControl](DEBUG): Construct LoopControl.
2015-09-29T11:05:19.423Z,1443524719.423 [LoopControl] Loaded
2015-09-29T11:05:19.424Z,1443524719.424 [ComponentRegistry](DEBUG): SyncComponent "LoopControl" handled in the control thread.
2015-09-29T11:05:19.424Z,1443524719.424 [Module Loader](DEBUG): Loaded Module: Control (Contains the Control components, such as Depth, Heading, and Speed Control)
2015-09-29T11:05:19.425Z,1443524719.425 [Module Loader](DEBUG): Loading Module at Modules/BIT.so
2015-09-29T11:05:19.584Z,1443524719.584 [SBIT](DEBUG): Construct Startup Built In Test.
2015-09-29T11:05:19.596Z,1443524719.596 [SBIT] Loaded
2015-09-29T11:05:19.597Z,1443524719.597 [ComponentRegistry](DEBUG): SyncComponent "SBIT" handled in the control thread.
2015-09-29T11:05:19.597Z,1443524719.597 [IBIT](DEBUG): Construct Initiated Built In Test.
2015-09-29T11:05:19.631Z,1443524719.631 [IBIT] Loaded
2015-09-29T11:05:19.632Z,1443524719.632 [ComponentRegistry](DEBUG): SyncComponent "IBIT" handled in the control thread.
2015-09-29T11:05:19.634Z,1443524719.634 [CBIT](DEBUG): Construct Continuous Built In Test.
2015-09-29T11:05:19.790Z,1443524719.790 [CBIT] Loaded
2015-09-29T11:05:19.790Z,1443524719.790 [ComponentRegistry](DEBUG): SyncComponent "CBIT" handled in the control thread.
2015-09-29T11:05:19.791Z,1443524719.791 [Module Loader](DEBUG): Loaded Module: BIT (Contains the BuiltInTest components, such as C Built In Test)
2015-09-29T11:05:19.791Z,1443524719.791 [Module Loader](DEBUG): Loading Module at Modules/Derivation.so
2015-09-29T11:05:19.831Z,1443524719.831 [DepthRateCalculator] Loaded
2015-09-29T11:05:19.832Z,1443524719.832 [ComponentRegistry](DEBUG): SyncComponent "DepthRateCalculator" handled in the control thread.
2015-09-29T11:05:19.837Z,1443524719.837 [PitchRateCalculator] Loaded
2015-09-29T11:05:19.838Z,1443524719.838 [ComponentRegistry](DEBUG): SyncComponent "PitchRateCalculator" handled in the control thread.
2015-09-29T11:05:19.849Z,1443524719.849 [SpeedCalculator] Loaded
2015-09-29T11:05:19.849Z,1443524719.849 [ComponentRegistry](DEBUG): SyncComponent "SpeedCalculator" handled in the control thread.
2015-09-29T11:05:19.871Z,1443524719.871 [TempGradientCalculator] Loaded
2015-09-29T11:05:19.871Z,1443524719.871 [ComponentRegistry](DEBUG): SyncComponent "TempGradientCalculator" handled in the control thread.
2015-09-29T11:05:19.888Z,1443524719.888 [VerticalTemperatureHomogeneityIndexCalculator] Loaded
2015-09-29T11:05:19.889Z,1443524719.889 [ComponentRegistry](DEBUG): SyncComponent "VerticalTemperatureHomogeneityIndexCalculator" handled in the control thread.
2015-09-29T11:05:19.894Z,1443524719.894 [YawRateCalculator] Loaded
2015-09-29T11:05:19.894Z,1443524719.894 [ComponentRegistry](DEBUG): SyncComponent "YawRateCalculator" handled in the control thread.
2015-09-29T11:05:19.895Z,1443524719.895 [Module Loader](DEBUG): Loaded Module: Derivation (Contains the base derivation components)
2015-09-29T11:05:19.895Z,1443524719.895 [Module Loader](DEBUG): Loading Module at Modules/Estimation.so
2015-09-29T11:05:20.023Z,1443524720.023 [StratificationFrontDetector](INFO): threshold set to: 0.399988 degC
2015-09-29T11:05:20.023Z,1443524720.023 [StratificationFrontDetector](DEBUG): (re)initializing
2015-09-29T11:05:20.023Z,1443524720.023 [StratificationFrontDetector] Loaded
2015-09-29T11:05:20.023Z,1443524720.023 [ComponentRegistry](DEBUG): SyncComponent "StratificationFrontDetector" handled in the control thread.
2015-09-29T11:05:20.024Z,1443524720.024 [Module Loader](DEBUG): Loaded Module: Estimation (Contains the base estimation components)
2015-09-29T11:05:20.025Z,1443524720.025 [Module Loader](DEBUG): Loading Module at Modules/Guidance.so
2015-09-29T11:05:20.318Z,1443524720.318 [Module Loader](DEBUG): Loaded Module: Guidance (Contains behaviors and commands)
2015-09-29T11:05:20.318Z,1443524720.318 [Module Loader](DEBUG): Loading Module at Modules/Navigation.so
2015-09-29T11:05:20.447Z,1443524720.447 [DeadReckonUsingMultipleVelocitySources] Loaded
2015-09-29T11:05:20.448Z,1443524720.448 [ComponentRegistry](DEBUG): SyncComponent "DeadReckonUsingMultipleVelocitySources" handled in the control thread.
2015-09-29T11:05:20.513Z,1443524720.513 [DeadReckonUsingSpeedCalculator] Loaded
2015-09-29T11:05:20.514Z,1443524720.514 [ComponentRegistry](DEBUG): SyncComponent "DeadReckonUsingSpeedCalculator" handled in the control thread.
2015-09-29T11:05:20.536Z,1443524720.536 [NavChart] Loaded
2015-09-29T11:05:20.536Z,1443524720.536 [ComponentRegistry](DEBUG): SyncComponent "NavChart" handled in the control thread.
2015-09-29T11:05:20.541Z,1443524720.541 [UniversalFixResidualReporter] Loaded
2015-09-29T11:05:20.542Z,1443524720.542 [ComponentRegistry](DEBUG): SyncComponent "UniversalFixResidualReporter" handled in the control thread.
2015-09-29T11:05:20.542Z,1443524720.542 [Module Loader](DEBUG): Loaded Module: Navigation (Contains the base navigation components)
2015-09-29T11:05:20.543Z,1443524720.543 [Module Loader](DEBUG): Loading Module at Modules/Sample.so
2015-09-29T11:05:20.551Z,1443524720.551 [Module Loader](DEBUG): Loaded Module: Sample (This is a Sample Module of Sample Components)
2015-09-29T11:05:20.552Z,1443524720.552 [Module Loader](DEBUG): Loading Module at Modules/Science.so
2015-09-29T11:05:20.849Z,1443524720.849 [CTD_NeilBrown] Loaded
2015-09-29T11:05:20.850Z,1443524720.850 [ComponentRegistry](DEBUG): Component "CTD_NeilBrown" handled in its own thread.
2015-09-29T11:05:20.852Z,1443524720.852 [CTD_NeilBrown ThreadHandler](DEBUG): Created PCaller Thread at 4059D4E0
2015-09-29T11:05:20.852Z,1443524720.852 [CTD_NeilBrown ThreadHandler](INFO): Protected caller Thread ID is 810
2015-09-29T11:05:20.865Z,1443524720.865 [ISUS] Loaded
2015-09-29T11:05:20.865Z,1443524720.865 [ComponentRegistry](DEBUG): SyncComponent "ISUS" handled in the control thread.
2015-09-29T11:05:20.884Z,1443524720.884 [PAR_Licor] Loaded
2015-09-29T11:05:20.885Z,1443524720.885 [ComponentRegistry](DEBUG): SyncComponent "PAR_Licor" handled in the control thread.
2015-09-29T11:05:20.940Z,1443524720.940 [WetLabsBB2FL] Loaded
2015-09-29T11:05:20.941Z,1443524720.941 [ComponentRegistry](DEBUG): Component "WetLabsBB2FL" handled in its own thread.
2015-09-29T11:05:20.944Z,1443524720.944 [WetLabsBB2FL ThreadHandler](DEBUG): Created PCaller Thread at 405CD4E0
2015-09-29T11:05:20.944Z,1443524720.944 [WetLabsBB2FL ThreadHandler](INFO): Protected caller Thread ID is 811
2015-09-29T11:05:20.945Z,1443524720.945 [Module Loader](DEBUG): Loaded Module: Science (Contains the science components)
2015-09-29T11:05:20.945Z,1443524720.945 [Module Loader](DEBUG): Loading Module at Modules/Sensor.so
2015-09-29T11:05:21.681Z,1443524721.681 [AHRS_sp3003D] Loaded
2015-09-29T11:05:21.681Z,1443524721.681 [ComponentRegistry](DEBUG): SyncComponent "AHRS_sp3003D" handled in the control thread.
2015-09-29T11:05:21.875Z,1443524721.875 [DataOverHttps] Loaded
2015-09-29T11:05:21.875Z,1443524721.875 [ComponentRegistry](DEBUG): SyncComponent "DataOverHttps" handled in the control thread.
2015-09-29T11:05:21.889Z,1443524721.889 [Depth_Keller] Loaded
2015-09-29T11:05:21.889Z,1443524721.889 [ComponentRegistry](DEBUG): SyncComponent "Depth_Keller" handled in the control thread.
2015-09-29T11:05:21.894Z,1443524721.894 [DropWeight] Loaded
2015-09-29T11:05:21.894Z,1443524721.894 [ComponentRegistry](DEBUG): SyncComponent "DropWeight" handled in the control thread.
2015-09-29T11:05:22.051Z,1443524722.051 [DVL_micro] Loaded
2015-09-29T11:05:22.052Z,1443524722.052 [ComponentRegistry](DEBUG): SyncComponent "DVL_micro" handled in the control thread.
2015-09-29T11:05:22.161Z,1443524722.161 [NAL9602] Loaded
2015-09-29T11:05:22.161Z,1443524722.161 [ComponentRegistry](DEBUG): SyncComponent "NAL9602" handled in the control thread.
2015-09-29T11:05:22.208Z,1443524722.208 [Onboard] Loaded
2015-09-29T11:05:22.209Z,1443524722.209 [ComponentRegistry](DEBUG): SyncComponent "Onboard" handled in the control thread.
2015-09-29T11:05:22.220Z,1443524722.220 [Radio_Surface] Loaded
2015-09-29T11:05:22.221Z,1443524722.221 [ComponentRegistry](DEBUG): Component "Radio_Surface" handled in its own thread.
2015-09-29T11:05:22.224Z,1443524722.224 [Radio_Surface ThreadHandler](DEBUG): Created PCaller Thread at 408114E0
2015-09-29T11:05:22.224Z,1443524722.224 [Radio_Surface ThreadHandler](INFO): Protected caller Thread ID is 812
2015-09-29T11:05:22.384Z,1443524722.384 [DAT] Loaded
2015-09-29T11:05:22.384Z,1443524722.384 [ComponentRegistry](DEBUG): SyncComponent "DAT" handled in the control thread.
2015-09-29T11:05:22.391Z,1443524722.391 [SCPI] Loaded
2015-09-29T11:05:22.391Z,1443524722.391 [ComponentRegistry](DEBUG): SyncComponent "SCPI" handled in the control thread.
2015-09-29T11:05:22.392Z,1443524722.392 [Module Loader](DEBUG): Loaded Module: Sensor (Contains the sensor components)
2015-09-29T11:05:22.393Z,1443524722.393 [Module Loader](DEBUG): Loading Module at Modules/Servo.so
2015-09-29T11:05:22.523Z,1443524722.523 [BuoyancyServo] Loaded
2015-09-29T11:05:22.523Z,1443524722.523 [ComponentRegistry](DEBUG): SyncComponent "BuoyancyServo" handled in the control thread.
2015-09-29T11:05:22.536Z,1443524722.536 [ElevatorServo] Loaded
2015-09-29T11:05:22.536Z,1443524722.536 [ComponentRegistry](DEBUG): SyncComponent "ElevatorServo" handled in the control thread.
2015-09-29T11:05:22.552Z,1443524722.552 [MassServo] Loaded
2015-09-29T11:05:22.553Z,1443524722.553 [ComponentRegistry](DEBUG): SyncComponent "MassServo" handled in the control thread.
2015-09-29T11:05:22.569Z,1443524722.569 [RudderServo] Loaded
2015-09-29T11:05:22.569Z,1443524722.569 [ComponentRegistry](DEBUG): SyncComponent "RudderServo" handled in the control thread.
2015-09-29T11:05:22.581Z,1443524722.581 [ThrusterServo] Loaded
2015-09-29T11:05:22.581Z,1443524722.581 [ComponentRegistry](DEBUG): SyncComponent "ThrusterServo" handled in the control thread.
2015-09-29T11:05:22.581Z,1443524722.581 [Module Loader](DEBUG): Loaded Module: Servo (This is the module containing motor controllers)
2015-09-29T11:05:22.582Z,1443524722.582 [Module Loader](DEBUG): Loading Module at Modules/Simulator.so
2015-09-29T11:05:22.785Z,1443524722.785 [InternalSim] Loaded
2015-09-29T11:05:22.785Z,1443524722.785 [ComponentRegistry](DEBUG): SyncComponent "InternalSim" handled in the control thread.
2015-09-29T11:05:22.786Z,1443524722.786 [Module Loader](DEBUG): Loaded Module: Simulator (This is the module containing the Simulator)
2015-09-29T11:05:22.787Z,1443524722.787 [Module Loader](DEBUG): Loading Module at Modules/Trigger.so
2015-09-29T11:05:22.826Z,1443524722.826 [Module Loader](DEBUG): Loaded Module: Trigger (Contains triggers for use in missions)
2015-09-29T11:05:22.835Z,1443524722.835 [ComponentRegistry](DEBUG): SyncComponent "MissionManager" handled in the control thread.
2015-09-29T11:05:22.836Z,1443524722.836 [ComponentRegistry](DEBUG): SyncComponent "Reporter" handled in the control thread.
2015-09-29T11:05:22.842Z,1443524722.842 [ComponentRegistry](DEBUG): Component "NavChartDb" handled in its own thread.
2015-09-29T11:05:22.844Z,1443524722.844 [NavChartDb ThreadHandler](DEBUG): Created PCaller Thread at 408BF4E0
2015-09-29T11:05:22.844Z,1443524722.844 [NavChartDb ThreadHandler](INFO): Protected caller Thread ID is 813
2015-09-29T11:05:22.849Z,1443524722.849 [Supervisor](INFO): Main Thread ID is 760
2015-09-29T11:05:22.849Z,1443524722.849 [Supervisor](DEBUG): Running supervisor.
2015-09-29T11:05:22.850Z,1443524722.850 [CommandLine ThreadHandler](INFO): Handler Thread ID is 814
2015-09-29T11:05:22.856Z,1443524722.856 [controlThread ThreadHandler](INFO): Handler Thread ID is 815
2015-09-29T11:05:22.857Z,1443524722.857 [controlThread](DEBUG): Initializing ControlThread
2015-09-29T11:05:22.858Z,1443524722.858 [VerticalControl](DEBUG): Initialize VerticalControlComponent.
2015-09-29T11:05:22.859Z,1443524722.859 [HorizontalControl](DEBUG): Initialize HorizontalControlComponent.
2015-09-29T11:05:22.860Z,1443524722.860 [SpeedControl](DEBUG): Initialize SpeedControlComponent.
2015-09-29T11:05:22.861Z,1443524722.861 [LoopControl](DEBUG): Initialize LoopControlComponent.
2015-09-29T11:05:22.861Z,1443524722.861 [SBIT](INFO): Initialize SBIT Component.
2015-09-29T11:05:22.862Z,1443524722.862 [SBIT](IMPORTANT): Tethys CM Info: SVN revision:12634
2015-09-29T11:05:22.863Z,1443524722.863 [SBIT](INFO): Kernel Reporting Different Release From Configuration.
Kernel Expected: 2.6.32-45-generic-pae
Kernel Reported: 2.6.27.8
2015-09-29T11:05:22.863Z,1443524722.863 [SBIT](INFO): Kernel Reporting Different Version From Configuration.
Kernel Expected: #102-Ubuntu SMP Wed Jan 2 22:10:16 UTC 2013
Kernel Reported: #641 PREEMPT Mon Sep 28 16:45:10 PDT 2015
2015-09-29T11:05:22.864Z,1443524722.864 [SBIT](INFO): Beginning SBIT in 20.000000 seconds.
2015-09-29T11:05:22.865Z,1443524722.865 [IBIT](INFO): Initialize IBIT Component.
2015-09-29T11:05:22.866Z,1443524722.866 [CBIT](DEBUG): Initialize CBIT Component.
2015-09-29T11:05:22.866Z,1443524722.866 [CBIT](FAULT): LAST RESTART WAS UNINTENTIONAL.
2015-09-29T11:05:22.866Z,1443524722.866 [CBIT](INFO): Last reboot was NOT due to watchdog timer.
2015-09-29T11:05:22.866Z,1443524722.866 [DepthRateCalculator](DEBUG): Initializing DepthRateCalculator.
2015-09-29T11:05:22.867Z,1443524722.867 [PitchRateCalculator](DEBUG): Initializing PitchRateCalculator.
2015-09-29T11:05:22.867Z,1443524722.867 [SpeedCalculator](DEBUG): Initializing SpeedCalculator.
2015-09-29T11:05:22.867Z,1443524722.867 [TempGradientCalculator](DEBUG): Initializing TempGradientCalculator.
2015-09-29T11:05:22.868Z,1443524722.868 [VerticalTemperatureHomogeneityIndexCalculator](DEBUG): (re)initializing
2015-09-29T11:05:22.869Z,1443524722.869 [YawRateCalculator](DEBUG): Initializing YawRateCalculator.
2015-09-29T11:05:22.869Z,1443524722.869 [DeadReckonUsingMultipleVelocitySources](DEBUG): Initializing DeadReckonUsingMultipleVelocitySources component.
2015-09-29T11:05:22.870Z,1443524722.870 [DeadReckonUsingMultipleVelocitySources](INFO): Will consider orientation measurement stale after 120s.
2015-09-29T11:05:22.870Z,1443524722.870 [DeadReckonUsingMultipleVelocitySources](INFO): Will consider velocity measurement stale after 20s.
2015-09-29T11:05:22.871Z,1443524722.871 [DeadReckonUsingSpeedCalculator](DEBUG): Initializing DeadReckonUsingSpeedCalculator component.
2015-09-29T11:05:22.871Z,1443524722.871 [DeadReckonUsingSpeedCalculator](INFO): Will consider orientation measurement stale after 120s.
2015-09-29T11:05:22.871Z,1443524722.871 [DeadReckonUsingSpeedCalculator](INFO): Will consider velocity measurement stale after 20s.
2015-09-29T11:05:22.872Z,1443524722.872 [NavChart](DEBUG): Initialize NavChart Navigation.
2015-09-29T11:05:22.872Z,1443524722.872 [UniversalFixResidualReporter](DEBUG): Initializing UniversalFixResidualReporter component.
2015-09-29T11:05:22.877Z,1443524722.877 [InternalSim](DEBUG):  InternalSim initializing...
2015-09-29T11:05:22.912Z,1443524722.912 [logger ThreadHandler](INFO): Handler Thread ID is 816
2015-09-29T11:05:23.040Z,1443524723.040 [CTD_NeilBrown ThreadHandler](INFO): Handler Thread ID is 817
2015-09-29T11:05:23.052Z,1443524723.052 [MissionManager](INFO): Loading Mission: Missions/Startup.xml
2015-09-29T11:05:23.062Z,1443524723.062 [WetLabsBB2FL ThreadHandler](INFO): Handler Thread ID is 818
2015-09-29T11:05:23.064Z,1443524723.064 [Radio_Surface ThreadHandler](INFO): Handler Thread ID is 819
2015-09-29T11:05:23.074Z,1443524723.074 [NavChartDb ThreadHandler](INFO): Handler Thread ID is 820
2015-09-29T11:05:23.084Z,1443524723.084 [NavChartDb](INFO): Looking for Electronic Nav Chart files in directory: Resources
2015-09-29T11:05:23.086Z,1443524723.086 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US1WC07M.000
2015-09-29T11:05:23.086Z,1443524723.086 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US2WC11M.000
2015-09-29T11:05:23.086Z,1443524723.086 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US3CA52M.000
2015-09-29T11:05:23.087Z,1443524723.087 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US4CA60M.000
2015-09-29T11:05:23.087Z,1443524723.087 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA50M.000
2015-09-29T11:05:23.087Z,1443524723.087 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA61M.000
2015-09-29T11:05:23.088Z,1443524723.088 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA62M.000
2015-09-29T11:05:23.088Z,1443524723.088 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA83M.000
2015-09-29T11:05:23.135Z,1443524723.135 [Startup:A.GoToSurface](DEBUG): Construct GoToSurface.
2015-09-29T11:05:23.150Z,1443524723.150 [MissionManager](DEBUG): 
<?xml version="1.0" encoding="UTF-8"?>
<Mission xmlns="Tethys"
       xmlns:Control="Tethys/Control"
       xmlns:Guidance="Tethys/Guidance" 
       xmlns:Units="Tethys/Units"
       xmlns:Universal="Tethys/Universal"
       xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
       xsi:schemaLocation="Tethys http://okeanids.mbari.org/tethys/Xml/Tethys.xsd
                           Tethys/Control http://okeanids.mbari.org/tethys/Xml/Control.xsd
                           Tethys/Guidance http://okeanids.mbari.org/tethys/Xml/Guidance.xsd
                           Tethys/Units http://okeanids.mbari.org/tethys/Xml/Units.xsd
                           Tethys/Universal http://okeanids.mbari.org/tethys/Xml/Universal.xsd"
       Id="Startup">

    <Guidance:GoToSurface>
        <Progression/>
    </Guidance:GoToSurface>

    <Aggregate Id="StartupSatComms">

        <Sequence/>

        <ReadDatum>
            <Timeout Duration="P1M" />
            <Universal:latitude_fix/>
        </ReadDatum>

        <ReadDatum>
            <Timeout Duration="P1M" />
            <Universal:platform_communications/>
        </ReadDatum>

    </Aggregate>

</Mission>


2015-09-29T11:05:23.151Z,1443524723.151 [MissionManager](INFO): Loading Mission: Missions/Default.xml
2015-09-29T11:05:23.238Z,1443524723.238 [MissionManager](INFO): DefineArg Default.ElapsedSinceDefaultStarted = 0.000000 min
2015-09-29T11:05:23.240Z,1443524723.240 [Default:A.GoToSurface](DEBUG): Construct GoToSurface.
2015-09-29T11:05:23.278Z,1443524723.278 [Default:CheckIn:Read_Iridium:A_Timeout:A.Execute](DEBUG): Construct Execute.
2015-09-29T11:05:23.293Z,1443524723.293 [Default:CheckIn:C.Wait](DEBUG): Construct Wait.
2015-09-29T11:05:23.318Z,1443524723.318 [Default:D.Execute](DEBUG): Construct Execute.
2015-09-29T11:05:23.329Z,1443524723.329 [MissionManager](DEBUG): 
<?xml version="1.0" encoding="UTF-8"?>
<Mission xmlns="Tethys"
xmlns:Guidance="Tethys/Guidance"
xmlns:Units="Tethys/Units"
xmlns:Universal="Tethys/Universal"
xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
xsi:schemaLocation="Tethys http://okeanids.mbari.org/tethys/Xml/Tethys.xsd
Tethys/Guidance http://okeanids.mbari.org/tethys/Xml/Guidance.xsd
Tethys/Units http://okeanids.mbari.org/tethys/Xml/Units.xsd
Tethys/Universal http://okeanids.mbari.org/tethys/Xml/Universal.xsd"
Id="Default">

    <DefineArg Name="ElapsedSinceDefaultStarted"><Units:minute/><Value>0</Value></DefineArg>

    <Guidance:GoToSurface>
        <Progression/>
    </Guidance:GoToSurface>

    <Aggregate Id="CheckIn">

        <Sequence Repeat="288"/>

        <ReadDatum Id="Read_GPS">
            <Sequence/>
            <Timeout Duration="P5M"/>
            <Universal:time_fix/>
        </ReadDatum>

        <ReadDatum Id="Read_Iridium">
            <Sequence/>
            <Timeout Duration="P2H">
                <Guidance:Execute>
                    <Sequence/>
                    <Setting><Guidance:Execute.command/><String>Burn 300</String></Setting>
                </Guidance:Execute>
                <Syslog Severity="Critical">Dropped weight due to communications timeout.</Syslog>
            </Timeout>
            <Universal:platform_communications/>
        </ReadDatum>

        <Guidance:Wait>
            <Sequence/>
            <Setting><Guidance:Wait.duration/><Units:minute/><Value>5</Value></Setting>
        </Guidance:Wait>

        <Assign><Sequence/><Arg Name="ElapsedSinceDefaultStarted"/><Elapsed><Universal:mission_started/></Elapsed></Assign>

        <Syslog Severity="Important">Default mission has been running for <Arg Name="ElapsedSinceDefaultStarted"/><Units:minute/></Syslog>

    </Aggregate>

    <Syslog Severity="Important">Restarting logs and Default mission.</Syslog>

    <Guidance:Execute>
        <Sequence/>
        <Setting><Guidance:Execute.command/><String>restart logs</String></Setting>
    </Guidance:Execute>

</Mission>


2015-09-29T11:05:23.335Z,1443524723.335 [controlThread](DEBUG): Component order: CycleStarter,InternalSim,ISUS,PAR_Licor,AHRS_sp3003D,DataOverHttps,Depth_Keller,DropWeight,DVL_micro,NAL9602,Onboard,DAT,SCPI,PAR_Licor,Depth_Keller,DepthRateCalculator,PitchRateCalculator,SpeedCalculator,TempGradientCalculator,VerticalTemperatureHomogeneityIndexCalculator,YawRateCalculator,StratificationFrontDetector,DeadReckonUsingMultipleVelocitySources,DeadReckonUsingSpeedCalculator,NavChart,UniversalFixResidualReporter,MissionManager,VerticalControl,HorizontalControl,SpeedControl,LoopControl,BuoyancyServo,ElevatorServo,MassServo,RudderServo,ThrusterServo,SBIT,IBIT,CBIT,Reporter,LogSplitter,
2015-09-29T11:05:23.544Z,1443524723.544 [DVL_micro](INFO): Initializing
2015-09-29T11:05:23.705Z,1443524723.705 [DeadReckonUsingMultipleVelocitySources](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T11:05:23.725Z,1443524723.725 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T11:05:23.852Z,1443524723.852 [BuoyancyServo](DEBUG): Initializing BuoyancyServo.
2015-09-29T11:05:23.858Z,1443524723.858 [ElevatorServo](DEBUG): Initializing ElevatorServo.
2015-09-29T11:05:23.876Z,1443524723.876 [MassServo](DEBUG): Initializing MassServo.
2015-09-29T11:05:23.882Z,1443524723.882 [RudderServo](DEBUG): Initializing RudderServo.
2015-09-29T11:05:23.900Z,1443524723.900 [ThrusterServo](DEBUG): Initializing ThrusterServo.
2015-09-29T11:05:24.146Z,1443524724.146 [DeadReckonUsingMultipleVelocitySources](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T11:05:24.147Z,1443524724.147 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T11:05:32.993Z,1443524732.993 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T11:05:33.307Z,1443524733.307 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T11:05:33.451Z,1443524733.451 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T11:05:33.851Z,1443524733.851 [DataOverHttps](INFO): setting available, lastComms_.elapsed()=0.003100
2015-09-29T11:05:33.854Z,1443524733.854 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T11:05:34.249Z,1443524734.249 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T11:05:34.649Z,1443524734.649 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T11:05:35.049Z,1443524735.049 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T11:05:35.448Z,1443524735.448 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T11:05:35.848Z,1443524735.848 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T11:05:36.248Z,1443524736.248 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T11:05:36.647Z,1443524736.647 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T11:05:37.050Z,1443524737.050 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T11:05:37.450Z,1443524737.450 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T11:05:37.850Z,1443524737.850 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T11:05:38.248Z,1443524738.248 [NAL9602](INFO): No messages in MT queue
2015-09-29T11:05:38.249Z,1443524738.249 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T11:05:38.650Z,1443524738.650 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T11:05:39.051Z,1443524739.051 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T11:05:39.449Z,1443524739.449 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T11:05:39.848Z,1443524739.848 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T11:05:40.254Z,1443524740.254 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T11:05:40.654Z,1443524740.654 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T11:05:41.054Z,1443524741.054 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T11:05:41.455Z,1443524741.455 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T11:05:41.852Z,1443524741.852 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T11:05:42.259Z,1443524742.259 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T11:05:42.658Z,1443524742.658 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T11:05:43.058Z,1443524743.058 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T11:05:43.458Z,1443524743.458 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T11:05:43.478Z,1443524743.478 [SBIT](IMPORTANT): Beginning Startup BIT
2015-09-29T11:05:43.859Z,1443524743.859 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T11:05:44.258Z,1443524744.258 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T11:05:44.658Z,1443524744.658 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T11:05:45.059Z,1443524745.059 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T11:05:45.458Z,1443524745.458 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T11:05:45.853Z,1443524745.853 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T11:05:46.249Z,1443524746.249 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T11:05:46.649Z,1443524746.649 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T11:05:47.049Z,1443524747.049 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T11:05:47.450Z,1443524747.450 [D