2015-09-29T10:57:15.368Z,1443524235.368 [Supervisor](DEBUG): Initializing supervisor.
2015-09-29T10:57:15.371Z,1443524235.371 [SyncHandler](DEBUG): Created PCaller Thread at 4034C4E0
2015-09-29T10:57:15.372Z,1443524235.372 [SyncHandler](INFO): Protected caller Thread ID is 761
2015-09-29T10:57:15.372Z,1443524235.372 [ComponentRegistry](DEBUG): Component "controlThread" handled in its own thread.
2015-09-29T10:57:15.374Z,1443524235.374 [controlThread ThreadHandler](DEBUG): Created PCaller Thread at 4037C4E0
2015-09-29T10:57:15.375Z,1443524235.375 [controlThread ThreadHandler](INFO): Protected caller Thread ID is 762
2015-09-29T10:57:15.377Z,1443524235.377 [ComponentRegistry](DEBUG): SyncComponent "CycleStarter" handled in the control thread.
2015-09-29T10:57:15.390Z,1443524235.390 [ComponentRegistry](DEBUG): Component "CommandLine" handled in its own thread.
2015-09-29T10:57:15.394Z,1443524235.394 [CommandLine ThreadHandler](DEBUG): Created PCaller Thread at 403AC4E0
2015-09-29T10:57:15.395Z,1443524235.395 [CommandLine ThreadHandler](INFO): Protected caller Thread ID is 763
2015-09-29T10:57:15.395Z,1443524235.395 [ComponentRegistry](DEBUG): Component "logger" handled in its own thread.
2015-09-29T10:57:15.398Z,1443524235.398 [logger ThreadHandler](DEBUG): Created PCaller Thread at 403DC4E0
2015-09-29T10:57:15.399Z,1443524235.399 [logger ThreadHandler](INFO): Protected caller Thread ID is 764
2015-09-29T10:57:15.401Z,1443524235.401 [ComponentRegistry](DEBUG): SyncComponent "LogSplitter" handled in the control thread.
2015-09-29T10:57:15.401Z,1443524235.401 [Supervisor](INFO): Looking for Config files in directory: Config/
2015-09-29T10:57:15.405Z,1443524235.405 [Supervisor](INFO): Opening Config file at: Config/Control.cfg
2015-09-29T10:57:15.799Z,1443524235.799 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Control
2015-09-29T10:57:15.801Z,1443524235.801 [Supervisor](INFO): Opening Config file at: Config/BIT.cfg
2015-09-29T10:57:15.994Z,1443524235.994 [ComponentRegistry](DEBUG): Loaded Config Component "Config/BIT
2015-09-29T10:57:15.996Z,1443524235.996 [Supervisor](INFO): Opening Config file at: Config/Derivation.cfg
2015-09-29T10:57:16.139Z,1443524236.139 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Derivation
2015-09-29T10:57:16.140Z,1443524236.140 [Supervisor](INFO): Opening Config file at: Config/Estimation.cfg
2015-09-29T10:57:16.287Z,1443524236.287 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Estimation
2015-09-29T10:57:16.288Z,1443524236.288 [Supervisor](INFO): Opening Config file at: Config/Guidance.cfg
2015-09-29T10:57:16.382Z,1443524236.382 [Supervisor](INFO): Opening Config file at: Config/Navigation.cfg
2015-09-29T10:57:16.603Z,1443524236.603 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Navigation
2015-09-29T10:57:16.604Z,1443524236.604 [Supervisor](INFO): Opening Config file at: Config/Sample.cfg
2015-09-29T10:57:16.699Z,1443524236.699 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Sample
2015-09-29T10:57:16.699Z,1443524236.699 [Supervisor](INFO): Opening Config file at: Config/Science.cfg
2015-09-29T10:57:17.015Z,1443524237.015 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Science
2015-09-29T10:57:17.016Z,1443524237.016 [Supervisor](INFO): Opening Config file at: Config/Sensor.cfg
2015-09-29T10:57:17.415Z,1443524237.415 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Sensor
2015-09-29T10:57:17.416Z,1443524237.416 [Supervisor](INFO): Opening Config file at: Config/Servo.cfg
2015-09-29T10:57:17.767Z,1443524237.767 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Servo
2015-09-29T10:57:17.769Z,1443524237.769 [Supervisor](INFO): Opening Config file at: Config/Simulator.cfg
2015-09-29T10:57:18.368Z,1443524238.368 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Simulator
2015-09-29T10:57:18.368Z,1443524238.368 [Supervisor](INFO): Opening Config file at: Config/logger.cfg
2015-09-29T10:57:18.599Z,1443524238.599 [ComponentRegistry](DEBUG): Loaded Config Component "Config/logger
2015-09-29T10:57:18.600Z,1443524238.600 [Supervisor](INFO): Opening Config file at: Config/secure.cfg
2015-09-29T10:57:18.719Z,1443524238.719 [ComponentRegistry](DEBUG): Loaded Config Component "Config/secure
2015-09-29T10:57:18.720Z,1443524238.720 [Supervisor](INFO): Opening Config file at: Config/vehicle.cfg
2015-09-29T10:57:19.240Z,1443524239.240 [ComponentRegistry](DEBUG): Loaded Config Component "Config/vehicle
2015-09-29T10:57:19.240Z,1443524239.240 [Supervisor](INFO): Opening Config file at: Config/workSite.cfg
2015-09-29T10:57:19.402Z,1443524239.402 [ComponentRegistry](DEBUG): Loaded Config Component "Config/workSite
2015-09-29T10:57:19.404Z,1443524239.404 [Supervisor](INFO): Looking for Config files in directory: Config/(none)/
2015-09-29T10:57:19.404Z,1443524239.404 [Supervisor](FAULT): Ignoring configuration overrides from Data/persisted.cfg
2015-09-29T10:57:19.408Z,1443524239.408 [Module Loader](DEBUG): Loading Module at Modules/Control.so
2015-09-29T10:57:19.483Z,1443524239.483 [VerticalControl](DEBUG): Construct VerticalControl.
2015-09-29T10:57:19.619Z,1443524239.619 [VerticalControl] Loaded
2015-09-29T10:57:19.619Z,1443524239.619 [ComponentRegistry](DEBUG): SyncComponent "VerticalControl" handled in the control thread.
2015-09-29T10:57:19.620Z,1443524239.620 [HorizontalControl](DEBUG): Construct HorizontalControl.
2015-09-29T10:57:19.702Z,1443524239.702 [HorizontalControl] Loaded
2015-09-29T10:57:19.706Z,1443524239.706 [ComponentRegistry](DEBUG): SyncComponent "HorizontalControl" handled in the control thread.
2015-09-29T10:57:19.707Z,1443524239.707 [SpeedControl](DEBUG): Construct SpeedControl.
2015-09-29T10:57:19.713Z,1443524239.713 [SpeedControl] Loaded
2015-09-29T10:57:19.713Z,1443524239.713 [ComponentRegistry](DEBUG): SyncComponent "SpeedControl" handled in the control thread.
2015-09-29T10:57:19.714Z,1443524239.714 [LoopControl](DEBUG): Construct LoopControl.
2015-09-29T10:57:19.714Z,1443524239.714 [LoopControl] Loaded
2015-09-29T10:57:19.715Z,1443524239.715 [ComponentRegistry](DEBUG): SyncComponent "LoopControl" handled in the control thread.
2015-09-29T10:57:19.715Z,1443524239.715 [Module Loader](DEBUG): Loaded Module: Control (Contains the Control components, such as Depth, Heading, and Speed Control)
2015-09-29T10:57:19.716Z,1443524239.716 [Module Loader](DEBUG): Loading Module at Modules/BIT.so
2015-09-29T10:57:19.876Z,1443524239.876 [SBIT](DEBUG): Construct Startup Built In Test.
2015-09-29T10:57:19.892Z,1443524239.892 [SBIT] Loaded
2015-09-29T10:57:19.892Z,1443524239.892 [ComponentRegistry](DEBUG): SyncComponent "SBIT" handled in the control thread.
2015-09-29T10:57:19.893Z,1443524239.893 [IBIT](DEBUG): Construct Initiated Built In Test.
2015-09-29T10:57:19.924Z,1443524239.924 [IBIT] Loaded
2015-09-29T10:57:19.924Z,1443524239.924 [ComponentRegistry](DEBUG): SyncComponent "IBIT" handled in the control thread.
2015-09-29T10:57:19.930Z,1443524239.930 [CBIT](DEBUG): Construct Continuous Built In Test.
2015-09-29T10:57:20.082Z,1443524240.082 [CBIT] Loaded
2015-09-29T10:57:20.086Z,1443524240.086 [ComponentRegistry](DEBUG): SyncComponent "CBIT" handled in the control thread.
2015-09-29T10:57:20.087Z,1443524240.087 [Module Loader](DEBUG): Loaded Module: BIT (Contains the BuiltInTest components, such as C Built In Test)
2015-09-29T10:57:20.087Z,1443524240.087 [Module Loader](DEBUG): Loading Module at Modules/Derivation.so
2015-09-29T10:57:20.132Z,1443524240.132 [DepthRateCalculator] Loaded
2015-09-29T10:57:20.132Z,1443524240.132 [ComponentRegistry](DEBUG): SyncComponent "DepthRateCalculator" handled in the control thread.
2015-09-29T10:57:20.137Z,1443524240.137 [PitchRateCalculator] Loaded
2015-09-29T10:57:20.138Z,1443524240.138 [ComponentRegistry](DEBUG): SyncComponent "PitchRateCalculator" handled in the control thread.
2015-09-29T10:57:20.149Z,1443524240.149 [SpeedCalculator] Loaded
2015-09-29T10:57:20.150Z,1443524240.150 [ComponentRegistry](DEBUG): SyncComponent "SpeedCalculator" handled in the control thread.
2015-09-29T10:57:20.167Z,1443524240.167 [TempGradientCalculator] Loaded
2015-09-29T10:57:20.167Z,1443524240.167 [ComponentRegistry](DEBUG): SyncComponent "TempGradientCalculator" handled in the control thread.
2015-09-29T10:57:20.189Z,1443524240.189 [VerticalTemperatureHomogeneityIndexCalculator] Loaded
2015-09-29T10:57:20.189Z,1443524240.189 [ComponentRegistry](DEBUG): SyncComponent "VerticalTemperatureHomogeneityIndexCalculator" handled in the control thread.
2015-09-29T10:57:20.199Z,1443524240.199 [YawRateCalculator] Loaded
2015-09-29T10:57:20.199Z,1443524240.199 [ComponentRegistry](DEBUG): SyncComponent "YawRateCalculator" handled in the control thread.
2015-09-29T10:57:20.200Z,1443524240.200 [Module Loader](DEBUG): Loaded Module: Derivation (Contains the base derivation components)
2015-09-29T10:57:20.200Z,1443524240.200 [Module Loader](DEBUG): Loading Module at Modules/Estimation.so
2015-09-29T10:57:20.320Z,1443524240.320 [StratificationFrontDetector](INFO): threshold set to: 0.399988 degC
2015-09-29T10:57:20.320Z,1443524240.320 [StratificationFrontDetector](DEBUG): (re)initializing
2015-09-29T10:57:20.320Z,1443524240.320 [StratificationFrontDetector] Loaded
2015-09-29T10:57:20.321Z,1443524240.321 [ComponentRegistry](DEBUG): SyncComponent "StratificationFrontDetector" handled in the control thread.
2015-09-29T10:57:20.321Z,1443524240.321 [Module Loader](DEBUG): Loaded Module: Estimation (Contains the base estimation components)
2015-09-29T10:57:20.326Z,1443524240.326 [Module Loader](DEBUG): Loading Module at Modules/Guidance.so
2015-09-29T10:57:20.625Z,1443524240.625 [Module Loader](DEBUG): Loaded Module: Guidance (Contains behaviors and commands)
2015-09-29T10:57:20.625Z,1443524240.625 [Module Loader](DEBUG): Loading Module at Modules/Navigation.so
2015-09-29T10:57:20.760Z,1443524240.760 [DeadReckonUsingMultipleVelocitySources] Loaded
2015-09-29T10:57:20.760Z,1443524240.760 [ComponentRegistry](DEBUG): SyncComponent "DeadReckonUsingMultipleVelocitySources" handled in the control thread.
2015-09-29T10:57:20.821Z,1443524240.821 [DeadReckonUsingSpeedCalculator] Loaded
2015-09-29T10:57:20.821Z,1443524240.821 [ComponentRegistry](DEBUG): SyncComponent "DeadReckonUsingSpeedCalculator" handled in the control thread.
2015-09-29T10:57:20.839Z,1443524240.839 [NavChart] Loaded
2015-09-29T10:57:20.839Z,1443524240.839 [ComponentRegistry](DEBUG): SyncComponent "NavChart" handled in the control thread.
2015-09-29T10:57:20.849Z,1443524240.849 [UniversalFixResidualReporter] Loaded
2015-09-29T10:57:20.849Z,1443524240.849 [ComponentRegistry](DEBUG): SyncComponent "UniversalFixResidualReporter" handled in the control thread.
2015-09-29T10:57:20.849Z,1443524240.849 [Module Loader](DEBUG): Loaded Module: Navigation (Contains the base navigation components)
2015-09-29T10:57:20.850Z,1443524240.850 [Module Loader](DEBUG): Loading Module at Modules/Sample.so
2015-09-29T10:57:20.863Z,1443524240.863 [Module Loader](DEBUG): Loaded Module: Sample (This is a Sample Module of Sample Components)
2015-09-29T10:57:20.863Z,1443524240.863 [Module Loader](DEBUG): Loading Module at Modules/Science.so
2015-09-29T10:57:21.168Z,1443524241.168 [CTD_NeilBrown] Loaded
2015-09-29T10:57:21.169Z,1443524241.169 [ComponentRegistry](DEBUG): Component "CTD_NeilBrown" handled in its own thread.
2015-09-29T10:57:21.170Z,1443524241.170 [CTD_NeilBrown ThreadHandler](DEBUG): Created PCaller Thread at 4059D4E0
2015-09-29T10:57:21.171Z,1443524241.171 [CTD_NeilBrown ThreadHandler](INFO): Protected caller Thread ID is 810
2015-09-29T10:57:21.184Z,1443524241.184 [ISUS] Loaded
2015-09-29T10:57:21.184Z,1443524241.184 [ComponentRegistry](DEBUG): SyncComponent "ISUS" handled in the control thread.
2015-09-29T10:57:21.199Z,1443524241.199 [PAR_Licor] Loaded
2015-09-29T10:57:21.199Z,1443524241.199 [ComponentRegistry](DEBUG): SyncComponent "PAR_Licor" handled in the control thread.
2015-09-29T10:57:21.259Z,1443524241.259 [WetLabsBB2FL] Loaded
2015-09-29T10:57:21.259Z,1443524241.259 [ComponentRegistry](DEBUG): Component "WetLabsBB2FL" handled in its own thread.
2015-09-29T10:57:21.262Z,1443524241.262 [WetLabsBB2FL ThreadHandler](DEBUG): Created PCaller Thread at 405CD4E0
2015-09-29T10:57:21.263Z,1443524241.263 [WetLabsBB2FL ThreadHandler](INFO): Protected caller Thread ID is 811
2015-09-29T10:57:21.263Z,1443524241.263 [Module Loader](DEBUG): Loaded Module: Science (Contains the science components)
2015-09-29T10:57:21.264Z,1443524241.264 [Module Loader](DEBUG): Loading Module at Modules/Sensor.so
2015-09-29T10:57:22.004Z,1443524242.004 [AHRS_sp3003D] Loaded
2015-09-29T10:57:22.004Z,1443524242.004 [ComponentRegistry](DEBUG): SyncComponent "AHRS_sp3003D" handled in the control thread.
2015-09-29T10:57:22.204Z,1443524242.204 [DataOverHttps] Loaded
2015-09-29T10:57:22.204Z,1443524242.204 [ComponentRegistry](DEBUG): SyncComponent "DataOverHttps" handled in the control thread.
2015-09-29T10:57:22.218Z,1443524242.218 [Depth_Keller] Loaded
2015-09-29T10:57:22.218Z,1443524242.218 [ComponentRegistry](DEBUG): SyncComponent "Depth_Keller" handled in the control thread.
2015-09-29T10:57:22.223Z,1443524242.223 [DropWeight] Loaded
2015-09-29T10:57:22.224Z,1443524242.224 [ComponentRegistry](DEBUG): SyncComponent "DropWeight" handled in the control thread.
2015-09-29T10:57:22.381Z,1443524242.381 [DVL_micro] Loaded
2015-09-29T10:57:22.382Z,1443524242.382 [ComponentRegistry](DEBUG): SyncComponent "DVL_micro" handled in the control thread.
2015-09-29T10:57:22.487Z,1443524242.487 [NAL9602] Loaded
2015-09-29T10:57:22.487Z,1443524242.487 [ComponentRegistry](DEBUG): SyncComponent "NAL9602" handled in the control thread.
2015-09-29T10:57:22.539Z,1443524242.539 [Onboard] Loaded
2015-09-29T10:57:22.539Z,1443524242.539 [ComponentRegistry](DEBUG): SyncComponent "Onboard" handled in the control thread.
2015-09-29T10:57:22.551Z,1443524242.551 [Radio_Surface] Loaded
2015-09-29T10:57:22.551Z,1443524242.551 [ComponentRegistry](DEBUG): Component "Radio_Surface" handled in its own thread.
2015-09-29T10:57:22.554Z,1443524242.554 [Radio_Surface ThreadHandler](DEBUG): Created PCaller Thread at 408114E0
2015-09-29T10:57:22.555Z,1443524242.555 [Radio_Surface ThreadHandler](INFO): Protected caller Thread ID is 812
2015-09-29T10:57:22.716Z,1443524242.716 [DAT] Loaded
2015-09-29T10:57:22.716Z,1443524242.716 [ComponentRegistry](DEBUG): SyncComponent "DAT" handled in the control thread.
2015-09-29T10:57:22.723Z,1443524242.723 [SCPI] Loaded
2015-09-29T10:57:22.723Z,1443524242.723 [ComponentRegistry](DEBUG): SyncComponent "SCPI" handled in the control thread.
2015-09-29T10:57:22.724Z,1443524242.724 [Module Loader](DEBUG): Loaded Module: Sensor (Contains the sensor components)
2015-09-29T10:57:22.724Z,1443524242.724 [Module Loader](DEBUG): Loading Module at Modules/Servo.so
2015-09-29T10:57:22.857Z,1443524242.857 [BuoyancyServo] Loaded
2015-09-29T10:57:22.857Z,1443524242.857 [ComponentRegistry](DEBUG): SyncComponent "BuoyancyServo" handled in the control thread.
2015-09-29T10:57:22.874Z,1443524242.874 [ElevatorServo] Loaded
2015-09-29T10:57:22.874Z,1443524242.874 [ComponentRegistry](DEBUG): SyncComponent "ElevatorServo" handled in the control thread.
2015-09-29T10:57:22.886Z,1443524242.886 [MassServo] Loaded
2015-09-29T10:57:22.887Z,1443524242.887 [ComponentRegistry](DEBUG): SyncComponent "MassServo" handled in the control thread.
2015-09-29T10:57:22.899Z,1443524242.899 [RudderServo] Loaded
2015-09-29T10:57:22.899Z,1443524242.899 [ComponentRegistry](DEBUG): SyncComponent "RudderServo" handled in the control thread.
2015-09-29T10:57:22.915Z,1443524242.915 [ThrusterServo] Loaded
2015-09-29T10:57:22.915Z,1443524242.915 [ComponentRegistry](DEBUG): SyncComponent "ThrusterServo" handled in the control thread.
2015-09-29T10:57:22.916Z,1443524242.916 [Module Loader](DEBUG): Loaded Module: Servo (This is the module containing motor controllers)
2015-09-29T10:57:22.916Z,1443524242.916 [Module Loader](DEBUG): Loading Module at Modules/Simulator.so
2015-09-29T10:57:23.119Z,1443524243.119 [InternalSim] Loaded
2015-09-29T10:57:23.120Z,1443524243.120 [ComponentRegistry](DEBUG): SyncComponent "InternalSim" handled in the control thread.
2015-09-29T10:57:23.120Z,1443524243.120 [Module Loader](DEBUG): Loaded Module: Simulator (This is the module containing the Simulator)
2015-09-29T10:57:23.121Z,1443524243.121 [Module Loader](DEBUG): Loading Module at Modules/Trigger.so
2015-09-29T10:57:23.160Z,1443524243.160 [Module Loader](DEBUG): Loaded Module: Trigger (Contains triggers for use in missions)
2015-09-29T10:57:23.169Z,1443524243.169 [ComponentRegistry](DEBUG): SyncComponent "MissionManager" handled in the control thread.
2015-09-29T10:57:23.169Z,1443524243.169 [ComponentRegistry](DEBUG): SyncComponent "Reporter" handled in the control thread.
2015-09-29T10:57:23.176Z,1443524243.176 [ComponentRegistry](DEBUG): Component "NavChartDb" handled in its own thread.
2015-09-29T10:57:23.178Z,1443524243.178 [NavChartDb ThreadHandler](DEBUG): Created PCaller Thread at 408BF4E0
2015-09-29T10:57:23.179Z,1443524243.179 [NavChartDb ThreadHandler](INFO): Protected caller Thread ID is 813
2015-09-29T10:57:23.183Z,1443524243.183 [Supervisor](INFO): Main Thread ID is 760
2015-09-29T10:57:23.184Z,1443524243.184 [Supervisor](DEBUG): Running supervisor.
2015-09-29T10:57:23.184Z,1443524243.184 [CommandLine ThreadHandler](INFO): Handler Thread ID is 814
2015-09-29T10:57:23.191Z,1443524243.191 [controlThread ThreadHandler](INFO): Handler Thread ID is 815
2015-09-29T10:57:23.191Z,1443524243.191 [controlThread](DEBUG): Initializing ControlThread
2015-09-29T10:57:23.192Z,1443524243.192 [VerticalControl](DEBUG): Initialize VerticalControlComponent.
2015-09-29T10:57:23.194Z,1443524243.194 [HorizontalControl](DEBUG): Initialize HorizontalControlComponent.
2015-09-29T10:57:23.195Z,1443524243.195 [SpeedControl](DEBUG): Initialize SpeedControlComponent.
2015-09-29T10:57:23.195Z,1443524243.195 [LoopControl](DEBUG): Initialize LoopControlComponent.
2015-09-29T10:57:23.196Z,1443524243.196 [SBIT](INFO): Initialize SBIT Component.
2015-09-29T10:57:23.196Z,1443524243.196 [SBIT](IMPORTANT): Tethys CM Info: SVN revision:12634
2015-09-29T10:57:23.197Z,1443524243.197 [SBIT](INFO): Kernel Reporting Different Release From Configuration.
Kernel Expected: 2.6.32-45-generic-pae
Kernel Reported: 2.6.27.8
2015-09-29T10:57:23.198Z,1443524243.198 [SBIT](INFO): Kernel Reporting Different Version From Configuration.
Kernel Expected: #102-Ubuntu SMP Wed Jan 2 22:10:16 UTC 2013
Kernel Reported: #641 PREEMPT Mon Sep 28 16:45:10 PDT 2015
2015-09-29T10:57:23.199Z,1443524243.199 [SBIT](INFO): Beginning SBIT in 20.000000 seconds.
2015-09-29T10:57:23.199Z,1443524243.199 [IBIT](INFO): Initialize IBIT Component.
2015-09-29T10:57:23.200Z,1443524243.200 [CBIT](DEBUG): Initialize CBIT Component.
2015-09-29T10:57:23.200Z,1443524243.200 [CBIT](FAULT): LAST RESTART WAS UNINTENTIONAL.
2015-09-29T10:57:23.200Z,1443524243.200 [CBIT](INFO): Last reboot was NOT due to watchdog timer.
2015-09-29T10:57:23.201Z,1443524243.201 [DepthRateCalculator](DEBUG): Initializing DepthRateCalculator.
2015-09-29T10:57:23.201Z,1443524243.201 [PitchRateCalculator](DEBUG): Initializing PitchRateCalculator.
2015-09-29T10:57:23.201Z,1443524243.201 [SpeedCalculator](DEBUG): Initializing SpeedCalculator.
2015-09-29T10:57:23.202Z,1443524243.202 [TempGradientCalculator](DEBUG): Initializing TempGradientCalculator.
2015-09-29T10:57:23.202Z,1443524243.202 [VerticalTemperatureHomogeneityIndexCalculator](DEBUG): (re)initializing
2015-09-29T10:57:23.203Z,1443524243.203 [YawRateCalculator](DEBUG): Initializing YawRateCalculator.
2015-09-29T10:57:23.204Z,1443524243.204 [DeadReckonUsingMultipleVelocitySources](DEBUG): Initializing DeadReckonUsingMultipleVelocitySources component.
2015-09-29T10:57:23.204Z,1443524243.204 [DeadReckonUsingMultipleVelocitySources](INFO): Will consider orientation measurement stale after 120s.
2015-09-29T10:57:23.205Z,1443524243.205 [DeadReckonUsingMultipleVelocitySources](INFO): Will consider velocity measurement stale after 20s.
2015-09-29T10:57:23.205Z,1443524243.205 [DeadReckonUsingSpeedCalculator](DEBUG): Initializing DeadReckonUsingSpeedCalculator component.
2015-09-29T10:57:23.205Z,1443524243.205 [DeadReckonUsingSpeedCalculator](INFO): Will consider orientation measurement stale after 120s.
2015-09-29T10:57:23.206Z,1443524243.206 [DeadReckonUsingSpeedCalculator](INFO): Will consider velocity measurement stale after 20s.
2015-09-29T10:57:23.206Z,1443524243.206 [NavChart](DEBUG): Initialize NavChart Navigation.
2015-09-29T10:57:23.207Z,1443524243.207 [UniversalFixResidualReporter](DEBUG): Initializing UniversalFixResidualReporter component.
2015-09-29T10:57:23.211Z,1443524243.211 [InternalSim](DEBUG):  InternalSim initializing...
2015-09-29T10:57:23.247Z,1443524243.247 [logger ThreadHandler](INFO): Handler Thread ID is 816
2015-09-29T10:57:23.347Z,1443524243.347 [CTD_NeilBrown ThreadHandler](INFO): Handler Thread ID is 817
2015-09-29T10:57:23.348Z,1443524243.348 [WetLabsBB2FL ThreadHandler](INFO): Handler Thread ID is 818
2015-09-29T10:57:23.415Z,1443524243.415 [Radio_Surface ThreadHandler](INFO): Handler Thread ID is 819
2015-09-29T10:57:23.431Z,1443524243.431 [NavChartDb ThreadHandler](INFO): Handler Thread ID is 820
2015-09-29T10:57:23.438Z,1443524243.438 [MissionManager](INFO): Loading Mission: Missions/Startup.xml
2015-09-29T10:57:23.469Z,1443524243.469 [NavChartDb](INFO): Looking for Electronic Nav Chart files in directory: Resources
2015-09-29T10:57:23.498Z,1443524243.498 [Startup:A.GoToSurface](DEBUG): Construct GoToSurface.
2015-09-29T10:57:23.503Z,1443524243.503 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US1WC07M.000
2015-09-29T10:57:23.503Z,1443524243.503 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US2WC11M.000
2015-09-29T10:57:23.503Z,1443524243.503 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US3CA52M.000
2015-09-29T10:57:23.503Z,1443524243.503 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US4CA60M.000
2015-09-29T10:57:23.504Z,1443524243.504 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA50M.000
2015-09-29T10:57:23.504Z,1443524243.504 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA61M.000
2015-09-29T10:57:23.504Z,1443524243.504 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA62M.000
2015-09-29T10:57:23.504Z,1443524243.504 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA83M.000
2015-09-29T10:57:23.515Z,1443524243.515 [MissionManager](DEBUG): 
<?xml version="1.0" encoding="UTF-8"?>
<Mission xmlns="Tethys"
       xmlns:Control="Tethys/Control"
       xmlns:Guidance="Tethys/Guidance" 
       xmlns:Units="Tethys/Units"
       xmlns:Universal="Tethys/Universal"
       xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
       xsi:schemaLocation="Tethys http://okeanids.mbari.org/tethys/Xml/Tethys.xsd
                           Tethys/Control http://okeanids.mbari.org/tethys/Xml/Control.xsd
                           Tethys/Guidance http://okeanids.mbari.org/tethys/Xml/Guidance.xsd
                           Tethys/Units http://okeanids.mbari.org/tethys/Xml/Units.xsd
                           Tethys/Universal http://okeanids.mbari.org/tethys/Xml/Universal.xsd"
       Id="Startup">

    <Guidance:GoToSurface>
        <Progression/>
    </Guidance:GoToSurface>

    <Aggregate Id="StartupSatComms">

        <Sequence/>

        <ReadDatum>
            <Timeout Duration="P1M" />
            <Universal:latitude_fix/>
        </ReadDatum>

        <ReadDatum>
            <Timeout Duration="P1M" />
            <Universal:platform_communications/>
        </ReadDatum>

    </Aggregate>

</Mission>


2015-09-29T10:57:23.516Z,1443524243.516 [MissionManager](INFO): Loading Mission: Missions/Default.xml
2015-09-29T10:57:23.585Z,1443524243.585 [MissionManager](INFO): DefineArg Default.ElapsedSinceDefaultStarted = 0.000000 min
2015-09-29T10:57:23.586Z,1443524243.586 [Default:A.GoToSurface](DEBUG): Construct GoToSurface.
2015-09-29T10:57:23.622Z,1443524243.622 [Default:CheckIn:Read_Iridium:A_Timeout:A.Execute](DEBUG): Construct Execute.
2015-09-29T10:57:23.633Z,1443524243.633 [Default:CheckIn:C.Wait](DEBUG): Construct Wait.
2015-09-29T10:57:23.655Z,1443524243.655 [Default:D.Execute](DEBUG): Construct Execute.
2015-09-29T10:57:23.659Z,1443524243.659 [MissionManager](DEBUG): 
<?xml version="1.0" encoding="UTF-8"?>
<Mission xmlns="Tethys"
xmlns:Guidance="Tethys/Guidance"
xmlns:Units="Tethys/Units"
xmlns:Universal="Tethys/Universal"
xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
xsi:schemaLocation="Tethys http://okeanids.mbari.org/tethys/Xml/Tethys.xsd
Tethys/Guidance http://okeanids.mbari.org/tethys/Xml/Guidance.xsd
Tethys/Units http://okeanids.mbari.org/tethys/Xml/Units.xsd
Tethys/Universal http://okeanids.mbari.org/tethys/Xml/Universal.xsd"
Id="Default">

    <DefineArg Name="ElapsedSinceDefaultStarted"><Units:minute/><Value>0</Value></DefineArg>

    <Guidance:GoToSurface>
        <Progression/>
    </Guidance:GoToSurface>

    <Aggregate Id="CheckIn">

        <Sequence Repeat="288"/>

        <ReadDatum Id="Read_GPS">
            <Sequence/>
            <Timeout Duration="P5M"/>
            <Universal:time_fix/>
        </ReadDatum>

        <ReadDatum Id="Read_Iridium">
            <Sequence/>
            <Timeout Duration="P2H">
                <Guidance:Execute>
                    <Sequence/>
                    <Setting><Guidance:Execute.command/><String>Burn 300</String></Setting>
                </Guidance:Execute>
                <Syslog Severity="Critical">Dropped weight due to communications timeout.</Syslog>
            </Timeout>
            <Universal:platform_communications/>
        </ReadDatum>

        <Guidance:Wait>
            <Sequence/>
            <Setting><Guidance:Wait.duration/><Units:minute/><Value>5</Value></Setting>
        </Guidance:Wait>

        <Assign><Sequence/><Arg Name="ElapsedSinceDefaultStarted"/><Elapsed><Universal:mission_started/></Elapsed></Assign>

        <Syslog Severity="Important">Default mission has been running for <Arg Name="ElapsedSinceDefaultStarted"/><Units:minute/></Syslog>

    </Aggregate>

    <Syslog Severity="Important">Restarting logs and Default mission.</Syslog>

    <Guidance:Execute>
        <Sequence/>
        <Setting><Guidance:Execute.command/><String>restart logs</String></Setting>
    </Guidance:Execute>

</Mission>


2015-09-29T10:57:23.668Z,1443524243.668 [controlThread](DEBUG): Component order: CycleStarter,InternalSim,ISUS,PAR_Licor,AHRS_sp3003D,DataOverHttps,Depth_Keller,DropWeight,DVL_micro,NAL9602,Onboard,DAT,SCPI,PAR_Licor,Depth_Keller,DepthRateCalculator,PitchRateCalculator,SpeedCalculator,TempGradientCalculator,VerticalTemperatureHomogeneityIndexCalculator,YawRateCalculator,StratificationFrontDetector,DeadReckonUsingMultipleVelocitySources,DeadReckonUsingSpeedCalculator,NavChart,UniversalFixResidualReporter,MissionManager,VerticalControl,HorizontalControl,SpeedControl,LoopControl,BuoyancyServo,ElevatorServo,MassServo,RudderServo,ThrusterServo,SBIT,IBIT,CBIT,Reporter,LogSplitter,
2015-09-29T10:57:23.948Z,1443524243.948 [DVL_micro](INFO): Initializing
2015-09-29T10:57:24.104Z,1443524244.104 [DeadReckonUsingMultipleVelocitySources](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T10:57:24.127Z,1443524244.127 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T10:57:24.234Z,1443524244.234 [BuoyancyServo](DEBUG): Initializing BuoyancyServo.
2015-09-29T10:57:24.259Z,1443524244.259 [ElevatorServo](DEBUG): Initializing ElevatorServo.
2015-09-29T10:57:24.289Z,1443524244.289 [MassServo](DEBUG): Initializing MassServo.
2015-09-29T10:57:24.310Z,1443524244.310 [RudderServo](DEBUG): Initializing RudderServo.
2015-09-29T10:57:24.322Z,1443524244.322 [ThrusterServo](DEBUG): Initializing ThrusterServo.
2015-09-29T10:57:24.557Z,1443524244.557 [DeadReckonUsingMultipleVelocitySources](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T10:57:24.558Z,1443524244.558 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T10:57:33.732Z,1443524253.732 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T10:57:34.064Z,1443524254.064 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T10:57:34.209Z,1443524254.209 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T10:57:34.611Z,1443524254.611 [DataOverHttps](INFO): setting available, lastComms_.elapsed()=0.003300
2015-09-29T10:57:34.614Z,1443524254.614 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T10:57:35.008Z,1443524255.008 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T10:57:35.407Z,1443524255.407 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T10:57:35.808Z,1443524255.808 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T10:57:36.208Z,1443524256.208 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T10:57:36.619Z,1443524256.619 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T10:57:37.008Z,1443524257.008 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T10:57:37.407Z,1443524257.407 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T10:57:37.807Z,1443524257.807 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T10:57:38.207Z,1443524258.207 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T10:57:38.607Z,1443524258.607 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T10:57:39.006Z,1443524259.006 [NAL9602](INFO): No messages in MT queue
2015-09-29T10:57:39.007Z,1443524259.007 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T10:57:39.407Z,1443524259.407 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T10:57:39.808Z,1443524259.808 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T10:57:40.207Z,1443524260.207 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T10:57:40.607Z,1443524260.607 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T10:57:41.007Z,1443524261.007 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T10:57:41.407Z,1443524261.407 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T10:57:41.808Z,1443524261.808 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T10:57:42.207Z,1443524262.207 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T10:57:42.615Z,1443524262.615 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T10:57:43.007Z,1443524263.007 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T10:57:43.407Z,1443524263.407 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T10:57:43.807Z,1443524263.807 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T10:57:43.821Z,1443524263.821 [SBIT](IMPORTANT): Beginning Startup BIT
2015-09-29T10:57:44.207Z,1443524264.207 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T10:57:44.608Z,1443524264.608 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T10:57:45.007Z,1443524265.007 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T10:57:45.409Z,1443524265.409 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T10:57:45.807Z,1443524265.807 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T10:57:46.207Z,1443524266.207 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T10:57:46.607Z,1443524266.607 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T10:57:47.012Z,1443524267.012 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T10:57:47.408Z,1443524267.408 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T10:57:47.808Z,1443524267.808 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T10:57:48.208Z,1443524268.208 [D