2015-09-29T10:09:52.510Z,1443521392.510 [Supervisor](DEBUG): Initializing supervisor.
2015-09-29T10:09:52.514Z,1443521392.514 [SyncHandler](DEBUG): Created PCaller Thread at 4034C4E0
2015-09-29T10:09:52.514Z,1443521392.514 [SyncHandler](INFO): Protected caller Thread ID is 761
2015-09-29T10:09:52.515Z,1443521392.515 [ComponentRegistry](DEBUG): Component "controlThread" handled in its own thread.
2015-09-29T10:09:52.519Z,1443521392.519 [controlThread ThreadHandler](DEBUG): Created PCaller Thread at 4037C4E0
2015-09-29T10:09:52.520Z,1443521392.520 [controlThread ThreadHandler](INFO): Protected caller Thread ID is 762
2015-09-29T10:09:52.523Z,1443521392.523 [ComponentRegistry](DEBUG): SyncComponent "CycleStarter" handled in the control thread.
2015-09-29T10:09:52.535Z,1443521392.535 [ComponentRegistry](DEBUG): Component "CommandLine" handled in its own thread.
2015-09-29T10:09:52.539Z,1443521392.539 [CommandLine ThreadHandler](DEBUG): Created PCaller Thread at 403AC4E0
2015-09-29T10:09:52.540Z,1443521392.540 [CommandLine ThreadHandler](INFO): Protected caller Thread ID is 763
2015-09-29T10:09:52.541Z,1443521392.541 [ComponentRegistry](DEBUG): Component "logger" handled in its own thread.
2015-09-29T10:09:52.543Z,1443521392.543 [logger ThreadHandler](DEBUG): Created PCaller Thread at 403DC4E0
2015-09-29T10:09:52.544Z,1443521392.544 [logger ThreadHandler](INFO): Protected caller Thread ID is 764
2015-09-29T10:09:52.546Z,1443521392.546 [ComponentRegistry](DEBUG): SyncComponent "LogSplitter" handled in the control thread.
2015-09-29T10:09:52.546Z,1443521392.546 [Supervisor](INFO): Looking for Config files in directory: Config/
2015-09-29T10:09:52.550Z,1443521392.550 [Supervisor](INFO): Opening Config file at: Config/Control.cfg
2015-09-29T10:09:52.944Z,1443521392.944 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Control
2015-09-29T10:09:52.946Z,1443521392.946 [Supervisor](INFO): Opening Config file at: Config/BIT.cfg
2015-09-29T10:09:53.139Z,1443521393.139 [ComponentRegistry](DEBUG): Loaded Config Component "Config/BIT
2015-09-29T10:09:53.141Z,1443521393.141 [Supervisor](INFO): Opening Config file at: Config/Derivation.cfg
2015-09-29T10:09:53.284Z,1443521393.284 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Derivation
2015-09-29T10:09:53.285Z,1443521393.285 [Supervisor](INFO): Opening Config file at: Config/Estimation.cfg
2015-09-29T10:09:53.432Z,1443521393.432 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Estimation
2015-09-29T10:09:53.433Z,1443521393.433 [Supervisor](INFO): Opening Config file at: Config/Guidance.cfg
2015-09-29T10:09:53.527Z,1443521393.527 [Supervisor](INFO): Opening Config file at: Config/Navigation.cfg
2015-09-29T10:09:53.748Z,1443521393.748 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Navigation
2015-09-29T10:09:53.749Z,1443521393.749 [Supervisor](INFO): Opening Config file at: Config/Sample.cfg
2015-09-29T10:09:53.848Z,1443521393.848 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Sample
2015-09-29T10:09:53.849Z,1443521393.849 [Supervisor](INFO): Opening Config file at: Config/Science.cfg
2015-09-29T10:09:54.160Z,1443521394.160 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Science
2015-09-29T10:09:54.161Z,1443521394.161 [Supervisor](INFO): Opening Config file at: Config/Sensor.cfg
2015-09-29T10:09:54.562Z,1443521394.562 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Sensor
2015-09-29T10:09:54.563Z,1443521394.563 [Supervisor](INFO): Opening Config file at: Config/Servo.cfg
2015-09-29T10:09:54.917Z,1443521394.917 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Servo
2015-09-29T10:09:54.918Z,1443521394.918 [Supervisor](INFO): Opening Config file at: Config/Simulator.cfg
2015-09-29T10:09:55.513Z,1443521395.513 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Simulator
2015-09-29T10:09:55.514Z,1443521395.514 [Supervisor](INFO): Opening Config file at: Config/logger.cfg
2015-09-29T10:09:55.745Z,1443521395.745 [ComponentRegistry](DEBUG): Loaded Config Component "Config/logger
2015-09-29T10:09:55.745Z,1443521395.745 [Supervisor](INFO): Opening Config file at: Config/secure.cfg
2015-09-29T10:09:55.864Z,1443521395.864 [ComponentRegistry](DEBUG): Loaded Config Component "Config/secure
2015-09-29T10:09:55.865Z,1443521395.865 [Supervisor](INFO): Opening Config file at: Config/vehicle.cfg
2015-09-29T10:09:56.393Z,1443521396.393 [ComponentRegistry](DEBUG): Loaded Config Component "Config/vehicle
2015-09-29T10:09:56.394Z,1443521396.394 [Supervisor](INFO): Opening Config file at: Config/workSite.cfg
2015-09-29T10:09:56.519Z,1443521396.519 [ComponentRegistry](DEBUG): Loaded Config Component "Config/workSite
2015-09-29T10:09:56.521Z,1443521396.521 [Supervisor](INFO): Looking for Config files in directory: Config/(none)/
2015-09-29T10:09:56.522Z,1443521396.522 [Supervisor](FAULT): Ignoring configuration overrides from Data/persisted.cfg
2015-09-29T10:09:56.526Z,1443521396.526 [Module Loader](DEBUG): Loading Module at Modules/Control.so
2015-09-29T10:09:56.601Z,1443521396.601 [VerticalControl](DEBUG): Construct VerticalControl.
2015-09-29T10:09:56.737Z,1443521396.737 [VerticalControl] Loaded
2015-09-29T10:09:56.737Z,1443521396.737 [ComponentRegistry](DEBUG): SyncComponent "VerticalControl" handled in the control thread.
2015-09-29T10:09:56.738Z,1443521396.738 [HorizontalControl](DEBUG): Construct HorizontalControl.
2015-09-29T10:09:56.824Z,1443521396.824 [HorizontalControl] Loaded
2015-09-29T10:09:56.825Z,1443521396.825 [ComponentRegistry](DEBUG): SyncComponent "HorizontalControl" handled in the control thread.
2015-09-29T10:09:56.825Z,1443521396.825 [SpeedControl](DEBUG): Construct SpeedControl.
2015-09-29T10:09:56.831Z,1443521396.831 [SpeedControl] Loaded
2015-09-29T10:09:56.832Z,1443521396.832 [ComponentRegistry](DEBUG): SyncComponent "SpeedControl" handled in the control thread.
2015-09-29T10:09:56.832Z,1443521396.832 [LoopControl](DEBUG): Construct LoopControl.
2015-09-29T10:09:56.833Z,1443521396.833 [LoopControl] Loaded
2015-09-29T10:09:56.833Z,1443521396.833 [ComponentRegistry](DEBUG): SyncComponent "LoopControl" handled in the control thread.
2015-09-29T10:09:56.834Z,1443521396.834 [Module Loader](DEBUG): Loaded Module: Control (Contains the Control components, such as Depth, Heading, and Speed Control)
2015-09-29T10:09:56.834Z,1443521396.834 [Module Loader](DEBUG): Loading Module at Modules/BIT.so
2015-09-29T10:09:56.993Z,1443521396.993 [SBIT](DEBUG): Construct Startup Built In Test.
2015-09-29T10:09:57.010Z,1443521397.010 [SBIT] Loaded
2015-09-29T10:09:57.010Z,1443521397.010 [ComponentRegistry](DEBUG): SyncComponent "SBIT" handled in the control thread.
2015-09-29T10:09:57.011Z,1443521397.011 [IBIT](DEBUG): Construct Initiated Built In Test.
2015-09-29T10:09:57.041Z,1443521397.041 [IBIT] Loaded
2015-09-29T10:09:57.041Z,1443521397.041 [ComponentRegistry](DEBUG): SyncComponent "IBIT" handled in the control thread.
2015-09-29T10:09:57.048Z,1443521397.048 [CBIT](DEBUG): Construct Continuous Built In Test.
2015-09-29T10:09:57.204Z,1443521397.204 [CBIT] Loaded
2015-09-29T10:09:57.204Z,1443521397.204 [ComponentRegistry](DEBUG): SyncComponent "CBIT" handled in the control thread.
2015-09-29T10:09:57.204Z,1443521397.204 [Module Loader](DEBUG): Loaded Module: BIT (Contains the BuiltInTest components, such as C Built In Test)
2015-09-29T10:09:57.205Z,1443521397.205 [Module Loader](DEBUG): Loading Module at Modules/Derivation.so
2015-09-29T10:09:57.247Z,1443521397.247 [DepthRateCalculator] Loaded
2015-09-29T10:09:57.247Z,1443521397.247 [ComponentRegistry](DEBUG): SyncComponent "DepthRateCalculator" handled in the control thread.
2015-09-29T10:09:57.253Z,1443521397.253 [PitchRateCalculator] Loaded
2015-09-29T10:09:57.253Z,1443521397.253 [ComponentRegistry](DEBUG): SyncComponent "PitchRateCalculator" handled in the control thread.
2015-09-29T10:09:57.264Z,1443521397.264 [SpeedCalculator] Loaded
2015-09-29T10:09:57.265Z,1443521397.265 [ComponentRegistry](DEBUG): SyncComponent "SpeedCalculator" handled in the control thread.
2015-09-29T10:09:57.286Z,1443521397.286 [TempGradientCalculator] Loaded
2015-09-29T10:09:57.287Z,1443521397.287 [ComponentRegistry](DEBUG): SyncComponent "TempGradientCalculator" handled in the control thread.
2015-09-29T10:09:57.304Z,1443521397.304 [VerticalTemperatureHomogeneityIndexCalculator] Loaded
2015-09-29T10:09:57.304Z,1443521397.304 [ComponentRegistry](DEBUG): SyncComponent "VerticalTemperatureHomogeneityIndexCalculator" handled in the control thread.
2015-09-29T10:09:57.310Z,1443521397.310 [YawRateCalculator] Loaded
2015-09-29T10:09:57.310Z,1443521397.310 [ComponentRegistry](DEBUG): SyncComponent "YawRateCalculator" handled in the control thread.
2015-09-29T10:09:57.311Z,1443521397.311 [Module Loader](DEBUG): Loaded Module: Derivation (Contains the base derivation components)
2015-09-29T10:09:57.311Z,1443521397.311 [Module Loader](DEBUG): Loading Module at Modules/Estimation.so
2015-09-29T10:09:57.433Z,1443521397.433 [StratificationFrontDetector](INFO): threshold set to: 0.399988 degC
2015-09-29T10:09:57.433Z,1443521397.433 [StratificationFrontDetector](DEBUG): (re)initializing
2015-09-29T10:09:57.434Z,1443521397.434 [StratificationFrontDetector] Loaded
2015-09-29T10:09:57.434Z,1443521397.434 [ComponentRegistry](DEBUG): SyncComponent "StratificationFrontDetector" handled in the control thread.
2015-09-29T10:09:57.434Z,1443521397.434 [Module Loader](DEBUG): Loaded Module: Estimation (Contains the base estimation components)
2015-09-29T10:09:57.435Z,1443521397.435 [Module Loader](DEBUG): Loading Module at Modules/Guidance.so
2015-09-29T10:09:57.737Z,1443521397.737 [Module Loader](DEBUG): Loaded Module: Guidance (Contains behaviors and commands)
2015-09-29T10:09:57.737Z,1443521397.737 [Module Loader](DEBUG): Loading Module at Modules/Navigation.so
2015-09-29T10:09:57.871Z,1443521397.871 [DeadReckonUsingMultipleVelocitySources] Loaded
2015-09-29T10:09:57.871Z,1443521397.871 [ComponentRegistry](DEBUG): SyncComponent "DeadReckonUsingMultipleVelocitySources" handled in the control thread.
2015-09-29T10:09:57.932Z,1443521397.932 [DeadReckonUsingSpeedCalculator] Loaded
2015-09-29T10:09:57.932Z,1443521397.932 [ComponentRegistry](DEBUG): SyncComponent "DeadReckonUsingSpeedCalculator" handled in the control thread.
2015-09-29T10:09:57.954Z,1443521397.954 [NavChart] Loaded
2015-09-29T10:09:57.955Z,1443521397.955 [ComponentRegistry](DEBUG): SyncComponent "NavChart" handled in the control thread.
2015-09-29T10:09:57.960Z,1443521397.960 [UniversalFixResidualReporter] Loaded
2015-09-29T10:09:57.960Z,1443521397.960 [ComponentRegistry](DEBUG): SyncComponent "UniversalFixResidualReporter" handled in the control thread.
2015-09-29T10:09:57.961Z,1443521397.961 [Module Loader](DEBUG): Loaded Module: Navigation (Contains the base navigation components)
2015-09-29T10:09:57.961Z,1443521397.961 [Module Loader](DEBUG): Loading Module at Modules/Sample.so
2015-09-29T10:09:57.970Z,1443521397.970 [Module Loader](DEBUG): Loaded Module: Sample (This is a Sample Module of Sample Components)
2015-09-29T10:09:57.971Z,1443521397.971 [Module Loader](DEBUG): Loading Module at Modules/Science.so
2015-09-29T10:09:58.273Z,1443521398.273 [CTD_NeilBrown] Loaded
2015-09-29T10:09:58.273Z,1443521398.273 [ComponentRegistry](DEBUG): Component "CTD_NeilBrown" handled in its own thread.
2015-09-29T10:09:58.275Z,1443521398.275 [CTD_NeilBrown ThreadHandler](DEBUG): Created PCaller Thread at 4059D4E0
2015-09-29T10:09:58.276Z,1443521398.276 [CTD_NeilBrown ThreadHandler](INFO): Protected caller Thread ID is 810
2015-09-29T10:09:58.289Z,1443521398.289 [ISUS] Loaded
2015-09-29T10:09:58.289Z,1443521398.289 [ComponentRegistry](DEBUG): SyncComponent "ISUS" handled in the control thread.
2015-09-29T10:09:58.308Z,1443521398.308 [PAR_Licor] Loaded
2015-09-29T10:09:58.308Z,1443521398.308 [ComponentRegistry](DEBUG): SyncComponent "PAR_Licor" handled in the control thread.
2015-09-29T10:09:58.365Z,1443521398.365 [WetLabsBB2FL] Loaded
2015-09-29T10:09:58.365Z,1443521398.365 [ComponentRegistry](DEBUG): Component "WetLabsBB2FL" handled in its own thread.
2015-09-29T10:09:58.367Z,1443521398.367 [WetLabsBB2FL ThreadHandler](DEBUG): Created PCaller Thread at 405CD4E0
2015-09-29T10:09:58.368Z,1443521398.368 [WetLabsBB2FL ThreadHandler](INFO): Protected caller Thread ID is 811
2015-09-29T10:09:58.368Z,1443521398.368 [Module Loader](DEBUG): Loaded Module: Science (Contains the science components)
2015-09-29T10:09:58.369Z,1443521398.369 [Module Loader](DEBUG): Loading Module at Modules/Sensor.so
2015-09-29T10:09:59.109Z,1443521399.109 [AHRS_sp3003D] Loaded
2015-09-29T10:09:59.110Z,1443521399.110 [ComponentRegistry](DEBUG): SyncComponent "AHRS_sp3003D" handled in the control thread.
2015-09-29T10:09:59.305Z,1443521399.305 [DataOverHttps] Loaded
2015-09-29T10:09:59.305Z,1443521399.305 [ComponentRegistry](DEBUG): SyncComponent "DataOverHttps" handled in the control thread.
2015-09-29T10:09:59.319Z,1443521399.319 [Depth_Keller] Loaded
2015-09-29T10:09:59.323Z,1443521399.323 [ComponentRegistry](DEBUG): SyncComponent "Depth_Keller" handled in the control thread.
2015-09-29T10:09:59.329Z,1443521399.329 [DropWeight] Loaded
2015-09-29T10:09:59.329Z,1443521399.329 [ComponentRegistry](DEBUG): SyncComponent "DropWeight" handled in the control thread.
2015-09-29T10:09:59.482Z,1443521399.482 [DVL_micro] Loaded
2015-09-29T10:09:59.482Z,1443521399.482 [ComponentRegistry](DEBUG): SyncComponent "DVL_micro" handled in the control thread.
2015-09-29T10:09:59.591Z,1443521399.591 [NAL9602] Loaded
2015-09-29T10:09:59.592Z,1443521399.592 [ComponentRegistry](DEBUG): SyncComponent "NAL9602" handled in the control thread.
2015-09-29T10:09:59.639Z,1443521399.639 [Onboard] Loaded
2015-09-29T10:09:59.640Z,1443521399.640 [ComponentRegistry](DEBUG): SyncComponent "Onboard" handled in the control thread.
2015-09-29T10:09:59.656Z,1443521399.656 [Radio_Surface] Loaded
2015-09-29T10:09:59.656Z,1443521399.656 [ComponentRegistry](DEBUG): Component "Radio_Surface" handled in its own thread.
2015-09-29T10:09:59.660Z,1443521399.660 [Radio_Surface ThreadHandler](DEBUG): Created PCaller Thread at 408114E0
2015-09-29T10:09:59.660Z,1443521399.660 [Radio_Surface ThreadHandler](INFO): Protected caller Thread ID is 812
2015-09-29T10:09:59.822Z,1443521399.822 [DAT] Loaded
2015-09-29T10:09:59.823Z,1443521399.823 [ComponentRegistry](DEBUG): SyncComponent "DAT" handled in the control thread.
2015-09-29T10:09:59.830Z,1443521399.830 [SCPI] Loaded
2015-09-29T10:09:59.830Z,1443521399.830 [ComponentRegistry](DEBUG): SyncComponent "SCPI" handled in the control thread.
2015-09-29T10:09:59.831Z,1443521399.831 [Module Loader](DEBUG): Loaded Module: Sensor (Contains the sensor components)
2015-09-29T10:09:59.831Z,1443521399.831 [Module Loader](DEBUG): Loading Module at Modules/Servo.so
2015-09-29T10:09:59.971Z,1443521399.971 [BuoyancyServo] Loaded
2015-09-29T10:09:59.972Z,1443521399.972 [ComponentRegistry](DEBUG): SyncComponent "BuoyancyServo" handled in the control thread.
2015-09-29T10:09:59.985Z,1443521399.985 [ElevatorServo] Loaded
2015-09-29T10:09:59.985Z,1443521399.985 [ComponentRegistry](DEBUG): SyncComponent "ElevatorServo" handled in the control thread.
2015-09-29T10:09:59.997Z,1443521399.997 [MassServo] Loaded
2015-09-29T10:09:59.997Z,1443521399.997 [ComponentRegistry](DEBUG): SyncComponent "MassServo" handled in the control thread.
2015-09-29T10:10:00.014Z,1443521400.014 [RudderServo] Loaded
2015-09-29T10:10:00.014Z,1443521400.014 [ComponentRegistry](DEBUG): SyncComponent "RudderServo" handled in the control thread.
2015-09-29T10:10:00.026Z,1443521400.026 [ThrusterServo] Loaded
2015-09-29T10:10:00.026Z,1443521400.026 [ComponentRegistry](DEBUG): SyncComponent "ThrusterServo" handled in the control thread.
2015-09-29T10:10:00.026Z,1443521400.026 [Module Loader](DEBUG): Loaded Module: Servo (This is the module containing motor controllers)
2015-09-29T10:10:00.027Z,1443521400.027 [Module Loader](DEBUG): Loading Module at Modules/Simulator.so
2015-09-29T10:10:00.228Z,1443521400.228 [InternalSim] Loaded
2015-09-29T10:10:00.228Z,1443521400.228 [ComponentRegistry](DEBUG): SyncComponent "InternalSim" handled in the control thread.
2015-09-29T10:10:00.229Z,1443521400.229 [Module Loader](DEBUG): Loaded Module: Simulator (This is the module containing the Simulator)
2015-09-29T10:10:00.229Z,1443521400.229 [Module Loader](DEBUG): Loading Module at Modules/Trigger.so
2015-09-29T10:10:00.273Z,1443521400.273 [Module Loader](DEBUG): Loaded Module: Trigger (Contains triggers for use in missions)
2015-09-29T10:10:00.277Z,1443521400.277 [ComponentRegistry](DEBUG): SyncComponent "MissionManager" handled in the control thread.
2015-09-29T10:10:00.278Z,1443521400.278 [ComponentRegistry](DEBUG): SyncComponent "Reporter" handled in the control thread.
2015-09-29T10:10:00.285Z,1443521400.285 [ComponentRegistry](DEBUG): Component "NavChartDb" handled in its own thread.
2015-09-29T10:10:00.288Z,1443521400.288 [NavChartDb ThreadHandler](DEBUG): Created PCaller Thread at 408BF4E0
2015-09-29T10:10:00.288Z,1443521400.288 [NavChartDb ThreadHandler](INFO): Protected caller Thread ID is 813
2015-09-29T10:10:00.293Z,1443521400.293 [Supervisor](INFO): Main Thread ID is 760
2015-09-29T10:10:00.293Z,1443521400.293 [Supervisor](DEBUG): Running supervisor.
2015-09-29T10:10:00.294Z,1443521400.294 [CommandLine ThreadHandler](INFO): Handler Thread ID is 814
2015-09-29T10:10:00.300Z,1443521400.300 [controlThread ThreadHandler](INFO): Handler Thread ID is 815
2015-09-29T10:10:00.300Z,1443521400.300 [controlThread](DEBUG): Initializing ControlThread
2015-09-29T10:10:00.301Z,1443521400.301 [VerticalControl](DEBUG): Initialize VerticalControlComponent.
2015-09-29T10:10:00.303Z,1443521400.303 [HorizontalControl](DEBUG): Initialize HorizontalControlComponent.
2015-09-29T10:10:00.304Z,1443521400.304 [SpeedControl](DEBUG): Initialize SpeedControlComponent.
2015-09-29T10:10:00.304Z,1443521400.304 [LoopControl](DEBUG): Initialize LoopControlComponent.
2015-09-29T10:10:00.305Z,1443521400.305 [SBIT](INFO): Initialize SBIT Component.
2015-09-29T10:10:00.305Z,1443521400.305 [SBIT](IMPORTANT): Tethys CM Info: SVN revision:12634
2015-09-29T10:10:00.307Z,1443521400.307 [SBIT](INFO): Kernel Reporting Different Release From Configuration.
Kernel Expected: 2.6.32-45-generic-pae
Kernel Reported: 2.6.27.8
2015-09-29T10:10:00.307Z,1443521400.307 [SBIT](INFO): Kernel Reporting Different Version From Configuration.
Kernel Expected: #102-Ubuntu SMP Wed Jan 2 22:10:16 UTC 2013
Kernel Reported: #641 PREEMPT Mon Sep 28 16:45:10 PDT 2015
2015-09-29T10:10:00.308Z,1443521400.308 [SBIT](INFO): Beginning SBIT in 20.000000 seconds.
2015-09-29T10:10:00.309Z,1443521400.309 [IBIT](INFO): Initialize IBIT Component.
2015-09-29T10:10:00.309Z,1443521400.309 [CBIT](DEBUG): Initialize CBIT Component.
2015-09-29T10:10:00.310Z,1443521400.310 [CBIT](FAULT): LAST RESTART WAS UNINTENTIONAL.
2015-09-29T10:10:00.310Z,1443521400.310 [CBIT](INFO): Last reboot was NOT due to watchdog timer.
2015-09-29T10:10:00.310Z,1443521400.310 [DepthRateCalculator](DEBUG): Initializing DepthRateCalculator.
2015-09-29T10:10:00.310Z,1443521400.310 [PitchRateCalculator](DEBUG): Initializing PitchRateCalculator.
2015-09-29T10:10:00.311Z,1443521400.311 [SpeedCalculator](DEBUG): Initializing SpeedCalculator.
2015-09-29T10:10:00.311Z,1443521400.311 [TempGradientCalculator](DEBUG): Initializing TempGradientCalculator.
2015-09-29T10:10:00.312Z,1443521400.312 [VerticalTemperatureHomogeneityIndexCalculator](DEBUG): (re)initializing
2015-09-29T10:10:00.312Z,1443521400.312 [YawRateCalculator](DEBUG): Initializing YawRateCalculator.
2015-09-29T10:10:00.313Z,1443521400.313 [DeadReckonUsingMultipleVelocitySources](DEBUG): Initializing DeadReckonUsingMultipleVelocitySources component.
2015-09-29T10:10:00.314Z,1443521400.314 [DeadReckonUsingMultipleVelocitySources](INFO): Will consider orientation measurement stale after 120s.
2015-09-29T10:10:00.314Z,1443521400.314 [DeadReckonUsingMultipleVelocitySources](INFO): Will consider velocity measurement stale after 20s.
2015-09-29T10:10:00.314Z,1443521400.314 [DeadReckonUsingSpeedCalculator](DEBUG): Initializing DeadReckonUsingSpeedCalculator component.
2015-09-29T10:10:00.315Z,1443521400.315 [DeadReckonUsingSpeedCalculator](INFO): Will consider orientation measurement stale after 120s.
2015-09-29T10:10:00.315Z,1443521400.315 [DeadReckonUsingSpeedCalculator](INFO): Will consider velocity measurement stale after 20s.
2015-09-29T10:10:00.316Z,1443521400.316 [NavChart](DEBUG): Initialize NavChart Navigation.
2015-09-29T10:10:00.316Z,1443521400.316 [UniversalFixResidualReporter](DEBUG): Initializing UniversalFixResidualReporter component.
2015-09-29T10:10:00.321Z,1443521400.321 [InternalSim](DEBUG):  InternalSim initializing...
2015-09-29T10:10:00.356Z,1443521400.356 [logger ThreadHandler](INFO): Handler Thread ID is 816
2015-09-29T10:10:00.443Z,1443521400.443 [CTD_NeilBrown ThreadHandler](INFO): Handler Thread ID is 817
2015-09-29T10:10:00.453Z,1443521400.453 [WetLabsBB2FL ThreadHandler](INFO): Handler Thread ID is 818
2015-09-29T10:10:00.526Z,1443521400.526 [Radio_Surface ThreadHandler](INFO): Handler Thread ID is 819
2015-09-29T10:10:00.543Z,1443521400.543 [MissionManager](INFO): Loading Mission: Missions/Startup.xml
2015-09-29T10:10:00.568Z,1443521400.568 [NavChartDb ThreadHandler](INFO): Handler Thread ID is 820
2015-09-29T10:10:00.610Z,1443521400.610 [NavChartDb](INFO): Looking for Electronic Nav Chart files in directory: Resources
2015-09-29T10:10:00.612Z,1443521400.612 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US1WC07M.000
2015-09-29T10:10:00.613Z,1443521400.613 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US2WC11M.000
2015-09-29T10:10:00.613Z,1443521400.613 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US3CA52M.000
2015-09-29T10:10:00.613Z,1443521400.613 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US4CA60M.000
2015-09-29T10:10:00.613Z,1443521400.613 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA50M.000
2015-09-29T10:10:00.613Z,1443521400.613 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA61M.000
2015-09-29T10:10:00.614Z,1443521400.614 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA62M.000
2015-09-29T10:10:00.614Z,1443521400.614 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA83M.000
2015-09-29T10:10:00.652Z,1443521400.652 [Startup:A.GoToSurface](DEBUG): Construct GoToSurface.
2015-09-29T10:10:00.693Z,1443521400.693 [MissionManager](DEBUG): 
<?xml version="1.0" encoding="UTF-8"?>
<Mission xmlns="Tethys"
       xmlns:Control="Tethys/Control"
       xmlns:Guidance="Tethys/Guidance" 
       xmlns:Units="Tethys/Units"
       xmlns:Universal="Tethys/Universal"
       xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
       xsi:schemaLocation="Tethys http://okeanids.mbari.org/tethys/Xml/Tethys.xsd
                           Tethys/Control http://okeanids.mbari.org/tethys/Xml/Control.xsd
                           Tethys/Guidance http://okeanids.mbari.org/tethys/Xml/Guidance.xsd
                           Tethys/Units http://okeanids.mbari.org/tethys/Xml/Units.xsd
                           Tethys/Universal http://okeanids.mbari.org/tethys/Xml/Universal.xsd"
       Id="Startup">

    <Guidance:GoToSurface>
        <Progression/>
    </Guidance:GoToSurface>

    <Aggregate Id="StartupSatComms">

        <Sequence/>

        <ReadDatum>
            <Timeout Duration="P1M" />
            <Universal:latitude_fix/>
        </ReadDatum>

        <ReadDatum>
            <Timeout Duration="P1M" />
            <Universal:platform_communications/>
        </ReadDatum>

    </Aggregate>

</Mission>


2015-09-29T10:10:00.693Z,1443521400.693 [MissionManager](INFO): Loading Mission: Missions/Default.xml
2015-09-29T10:10:00.746Z,1443521400.746 [MissionManager](INFO): DefineArg Default.ElapsedSinceDefaultStarted = 0.000000 min
2015-09-29T10:10:00.764Z,1443521400.764 [Default:A.GoToSurface](DEBUG): Construct GoToSurface.
2015-09-29T10:10:00.792Z,1443521400.792 [Default:CheckIn:Read_Iridium:A_Timeout:A.Execute](DEBUG): Construct Execute.
2015-09-29T10:10:00.795Z,1443521400.795 [Default:CheckIn:C.Wait](DEBUG): Construct Wait.
2015-09-29T10:10:00.825Z,1443521400.825 [Default:D.Execute](DEBUG): Construct Execute.
2015-09-29T10:10:00.844Z,1443521400.844 [MissionManager](DEBUG): 
<?xml version="1.0" encoding="UTF-8"?>
<Mission xmlns="Tethys"
xmlns:Guidance="Tethys/Guidance"
xmlns:Units="Tethys/Units"
xmlns:Universal="Tethys/Universal"
xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
xsi:schemaLocation="Tethys http://okeanids.mbari.org/tethys/Xml/Tethys.xsd
Tethys/Guidance http://okeanids.mbari.org/tethys/Xml/Guidance.xsd
Tethys/Units http://okeanids.mbari.org/tethys/Xml/Units.xsd
Tethys/Universal http://okeanids.mbari.org/tethys/Xml/Universal.xsd"
Id="Default">

    <DefineArg Name="ElapsedSinceDefaultStarted"><Units:minute/><Value>0</Value></DefineArg>

    <Guidance:GoToSurface>
        <Progression/>
    </Guidance:GoToSurface>

    <Aggregate Id="CheckIn">

        <Sequence Repeat="288"/>

        <ReadDatum Id="Read_GPS">
            <Sequence/>
            <Timeout Duration="P5M"/>
            <Universal:time_fix/>
        </ReadDatum>

        <ReadDatum Id="Read_Iridium">
            <Sequence/>
            <Timeout Duration="P2H">
                <Guidance:Execute>
                    <Sequence/>
                    <Setting><Guidance:Execute.command/><String>Burn 300</String></Setting>
                </Guidance:Execute>
                <Syslog Severity="Critical">Dropped weight due to communications timeout.</Syslog>
            </Timeout>
            <Universal:platform_communications/>
        </ReadDatum>

        <Guidance:Wait>
            <Sequence/>
            <Setting><Guidance:Wait.duration/><Units:minute/><Value>5</Value></Setting>
        </Guidance:Wait>

        <Assign><Sequence/><Arg Name="ElapsedSinceDefaultStarted"/><Elapsed><Universal:mission_started/></Elapsed></Assign>

        <Syslog Severity="Important">Default mission has been running for <Arg Name="ElapsedSinceDefaultStarted"/><Units:minute/></Syslog>

    </Aggregate>

    <Syslog Severity="Important">Restarting logs and Default mission.</Syslog>

    <Guidance:Execute>
        <Sequence/>
        <Setting><Guidance:Execute.command/><String>restart logs</String></Setting>
    </Guidance:Execute>

</Mission>


2015-09-29T10:10:00.850Z,1443521400.850 [controlThread](DEBUG): Component order: CycleStarter,InternalSim,ISUS,PAR_Licor,AHRS_sp3003D,DataOverHttps,Depth_Keller,DropWeight,DVL_micro,NAL9602,Onboard,DAT,SCPI,PAR_Licor,Depth_Keller,DepthRateCalculator,PitchRateCalculator,SpeedCalculator,TempGradientCalculator,VerticalTemperatureHomogeneityIndexCalculator,YawRateCalculator,StratificationFrontDetector,DeadReckonUsingMultipleVelocitySources,DeadReckonUsingSpeedCalculator,NavChart,UniversalFixResidualReporter,MissionManager,VerticalControl,HorizontalControl,SpeedControl,LoopControl,BuoyancyServo,ElevatorServo,MassServo,RudderServo,ThrusterServo,SBIT,IBIT,CBIT,Reporter,LogSplitter,
2015-09-29T10:10:01.050Z,1443521401.050 [DVL_micro](INFO): Initializing
2015-09-29T10:10:01.212Z,1443521401.212 [DeadReckonUsingMultipleVelocitySources](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T10:10:01.222Z,1443521401.222 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T10:10:01.348Z,1443521401.348 [BuoyancyServo](DEBUG): Initializing BuoyancyServo.
2015-09-29T10:10:01.360Z,1443521401.360 [ElevatorServo](DEBUG): Initializing ElevatorServo.
2015-09-29T10:10:01.372Z,1443521401.372 [MassServo](DEBUG): Initializing MassServo.
2015-09-29T10:10:01.384Z,1443521401.384 [RudderServo](DEBUG): Initializing RudderServo.
2015-09-29T10:10:01.396Z,1443521401.396 [ThrusterServo](DEBUG): Initializing ThrusterServo.
2015-09-29T10:10:01.681Z,1443521401.681 [DeadReckonUsingMultipleVelocitySources](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T10:10:01.682Z,1443521401.682 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T10:10:10.791Z,1443521410.791 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T10:10:11.155Z,1443521411.155 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T10:10:11.290Z,1443521411.290 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T10:10:11.690Z,1443521411.690 [DataOverHttps](INFO): setting available, lastComms_.elapsed()=0.003100
2015-09-29T10:10:11.694Z,1443521411.694 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T10:10:12.088Z,1443521412.088 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T10:10:12.489Z,1443521412.489 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T10:10:12.889Z,1443521412.889 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T10:10:13.288Z,1443521413.288 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T10:10:13.689Z,1443521413.689 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T10:10:14.088Z,1443521414.088 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T10:10:14.503Z,1443521414.503 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T10:10:14.888Z,1443521414.888 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T10:10:15.288Z,1443521415.288 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T10:10:15.689Z,1443521415.689 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T10:10:16.087Z,1443521416.087 [NAL9602](INFO): No messages in MT queue
2015-09-29T10:10:16.088Z,1443521416.088 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T10:10:16.488Z,1443521416.488 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T10:10:16.888Z,1443521416.888 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T10:10:17.288Z,1443521417.288 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T10:10:17.688Z,1443521417.688 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T10:10:18.093Z,1443521418.093 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T10:10:18.488Z,1443521418.488 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T10:10:18.888Z,1443521418.888 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T10:10:19.288Z,1443521419.288 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T10:10:19.688Z,1443521419.688 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T10:10:20.088Z,1443521420.088 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T10:10:20.489Z,1443521420.489 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T10:10:20.888Z,1443521420.888 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T10:10:20.904Z,1443521420.904 [SBIT](IMPORTANT): Beginning Startup BIT
2015-09-29T10:10:21.288Z,1443521421.288 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T10:10:21.688Z,1443521421.688 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T10:10:22.089Z,1443521422.089 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T10:10:22.488Z,1443521422.488 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T10:10:22.888Z,1443521422.888 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T10:10:23.288Z,1443521423.288 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T10:10:23.688Z,1443521423.688 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T10:10:24.088Z,1443521424.088 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T10:10:24.488Z,1443521424.488 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T10:10:24.889Z,1443521424.889 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T10:10:25.289Z,1443521425.289 [D