2015-09-29T10:01:56.953Z,1443520916.953 [Supervisor](DEBUG): Initializing supervisor.
2015-09-29T10:01:56.959Z,1443520916.959 [SyncHandler](DEBUG): Created PCaller Thread at 4034C4E0
2015-09-29T10:01:56.960Z,1443520916.960 [SyncHandler](INFO): Protected caller Thread ID is 761
2015-09-29T10:01:56.960Z,1443520916.960 [ComponentRegistry](DEBUG): Component "controlThread" handled in its own thread.
2015-09-29T10:01:56.963Z,1443520916.963 [controlThread ThreadHandler](DEBUG): Created PCaller Thread at 4037C4E0
2015-09-29T10:01:56.964Z,1443520916.964 [controlThread ThreadHandler](INFO): Protected caller Thread ID is 762
2015-09-29T10:01:56.966Z,1443520916.966 [ComponentRegistry](DEBUG): SyncComponent "CycleStarter" handled in the control thread.
2015-09-29T10:01:56.979Z,1443520916.979 [ComponentRegistry](DEBUG): Component "CommandLine" handled in its own thread.
2015-09-29T10:01:56.983Z,1443520916.983 [CommandLine ThreadHandler](DEBUG): Created PCaller Thread at 403AC4E0
2015-09-29T10:01:56.984Z,1443520916.984 [CommandLine ThreadHandler](INFO): Protected caller Thread ID is 763
2015-09-29T10:01:56.984Z,1443520916.984 [ComponentRegistry](DEBUG): Component "logger" handled in its own thread.
2015-09-29T10:01:56.987Z,1443520916.987 [logger ThreadHandler](DEBUG): Created PCaller Thread at 403DC4E0
2015-09-29T10:01:56.988Z,1443520916.988 [logger ThreadHandler](INFO): Protected caller Thread ID is 764
2015-09-29T10:01:56.990Z,1443520916.990 [ComponentRegistry](DEBUG): SyncComponent "LogSplitter" handled in the control thread.
2015-09-29T10:01:56.990Z,1443520916.990 [Supervisor](INFO): Looking for Config files in directory: Config/
2015-09-29T10:01:56.994Z,1443520916.994 [Supervisor](INFO): Opening Config file at: Config/Control.cfg
2015-09-29T10:01:57.390Z,1443520917.390 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Control
2015-09-29T10:01:57.392Z,1443520917.392 [Supervisor](INFO): Opening Config file at: Config/BIT.cfg
2015-09-29T10:01:57.584Z,1443520917.584 [ComponentRegistry](DEBUG): Loaded Config Component "Config/BIT
2015-09-29T10:01:57.586Z,1443520917.586 [Supervisor](INFO): Opening Config file at: Config/Derivation.cfg
2015-09-29T10:01:57.728Z,1443520917.728 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Derivation
2015-09-29T10:01:57.729Z,1443520917.729 [Supervisor](INFO): Opening Config file at: Config/Estimation.cfg
2015-09-29T10:01:57.876Z,1443520917.876 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Estimation
2015-09-29T10:01:57.877Z,1443520917.877 [Supervisor](INFO): Opening Config file at: Config/Guidance.cfg
2015-09-29T10:01:57.971Z,1443520917.971 [Supervisor](INFO): Opening Config file at: Config/Navigation.cfg
2015-09-29T10:01:58.192Z,1443520918.192 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Navigation
2015-09-29T10:01:58.193Z,1443520918.193 [Supervisor](INFO): Opening Config file at: Config/Sample.cfg
2015-09-29T10:01:58.288Z,1443520918.288 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Sample
2015-09-29T10:01:58.288Z,1443520918.288 [Supervisor](INFO): Opening Config file at: Config/Science.cfg
2015-09-29T10:01:58.600Z,1443520918.600 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Science
2015-09-29T10:01:58.601Z,1443520918.601 [Supervisor](INFO): Opening Config file at: Config/Sensor.cfg
2015-09-29T10:01:59.000Z,1443520919.000 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Sensor
2015-09-29T10:01:59.001Z,1443520919.001 [Supervisor](INFO): Opening Config file at: Config/Servo.cfg
2015-09-29T10:01:59.320Z,1443520919.320 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Servo
2015-09-29T10:01:59.321Z,1443520919.321 [Supervisor](INFO): Opening Config file at: Config/Simulator.cfg
2015-09-29T10:01:59.855Z,1443520919.855 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Simulator
2015-09-29T10:01:59.856Z,1443520919.856 [Supervisor](INFO): Opening Config file at: Config/logger.cfg
2015-09-29T10:02:00.065Z,1443520920.065 [ComponentRegistry](DEBUG): Loaded Config Component "Config/logger
2015-09-29T10:02:00.065Z,1443520920.065 [Supervisor](INFO): Opening Config file at: Config/secure.cfg
2015-09-29T10:02:00.171Z,1443520920.171 [ComponentRegistry](DEBUG): Loaded Config Component "Config/secure
2015-09-29T10:02:00.172Z,1443520920.172 [Supervisor](INFO): Opening Config file at: Config/vehicle.cfg
2015-09-29T10:02:00.635Z,1443520920.635 [ComponentRegistry](DEBUG): Loaded Config Component "Config/vehicle
2015-09-29T10:02:00.636Z,1443520920.636 [Supervisor](INFO): Opening Config file at: Config/workSite.cfg
2015-09-29T10:02:00.797Z,1443520920.797 [ComponentRegistry](DEBUG): Loaded Config Component "Config/workSite
2015-09-29T10:02:00.799Z,1443520920.799 [Supervisor](INFO): Looking for Config files in directory: Config/(none)/
2015-09-29T10:02:00.799Z,1443520920.799 [Supervisor](FAULT): Ignoring configuration overrides from Data/persisted.cfg
2015-09-29T10:02:00.803Z,1443520920.803 [Module Loader](DEBUG): Loading Module at Modules/Control.so
2015-09-29T10:02:00.873Z,1443520920.873 [VerticalControl](DEBUG): Construct VerticalControl.
2015-09-29T10:02:00.995Z,1443520920.995 [VerticalControl] Loaded
2015-09-29T10:02:00.996Z,1443520920.996 [ComponentRegistry](DEBUG): SyncComponent "VerticalControl" handled in the control thread.
2015-09-29T10:02:00.996Z,1443520920.996 [HorizontalControl](DEBUG): Construct HorizontalControl.
2015-09-29T10:02:01.068Z,1443520921.068 [HorizontalControl] Loaded
2015-09-29T10:02:01.069Z,1443520921.069 [ComponentRegistry](DEBUG): SyncComponent "HorizontalControl" handled in the control thread.
2015-09-29T10:02:01.069Z,1443520921.069 [SpeedControl](DEBUG): Construct SpeedControl.
2015-09-29T10:02:01.075Z,1443520921.075 [SpeedControl] Loaded
2015-09-29T10:02:01.075Z,1443520921.075 [ComponentRegistry](DEBUG): SyncComponent "SpeedControl" handled in the control thread.
2015-09-29T10:02:01.076Z,1443520921.076 [LoopControl](DEBUG): Construct LoopControl.
2015-09-29T10:02:01.077Z,1443520921.077 [LoopControl] Loaded
2015-09-29T10:02:01.077Z,1443520921.077 [ComponentRegistry](DEBUG): SyncComponent "LoopControl" handled in the control thread.
2015-09-29T10:02:01.077Z,1443520921.077 [Module Loader](DEBUG): Loaded Module: Control (Contains the Control components, such as Depth, Heading, and Speed Control)
2015-09-29T10:02:01.078Z,1443520921.078 [Module Loader](DEBUG): Loading Module at Modules/BIT.so
2015-09-29T10:02:01.223Z,1443520921.223 [SBIT](DEBUG): Construct Startup Built In Test.
2015-09-29T10:02:01.235Z,1443520921.235 [SBIT] Loaded
2015-09-29T10:02:01.236Z,1443520921.236 [ComponentRegistry](DEBUG): SyncComponent "SBIT" handled in the control thread.
2015-09-29T10:02:01.236Z,1443520921.236 [IBIT](DEBUG): Construct Initiated Built In Test.
2015-09-29T10:02:01.266Z,1443520921.266 [IBIT] Loaded
2015-09-29T10:02:01.266Z,1443520921.266 [ComponentRegistry](DEBUG): SyncComponent "IBIT" handled in the control thread.
2015-09-29T10:02:01.268Z,1443520921.268 [CBIT](DEBUG): Construct Continuous Built In Test.
2015-09-29T10:02:01.405Z,1443520921.405 [CBIT] Loaded
2015-09-29T10:02:01.406Z,1443520921.406 [ComponentRegistry](DEBUG): SyncComponent "CBIT" handled in the control thread.
2015-09-29T10:02:01.406Z,1443520921.406 [Module Loader](DEBUG): Loaded Module: BIT (Contains the BuiltInTest components, such as C Built In Test)
2015-09-29T10:02:01.407Z,1443520921.407 [Module Loader](DEBUG): Loading Module at Modules/Derivation.so
2015-09-29T10:02:01.444Z,1443520921.444 [DepthRateCalculator] Loaded
2015-09-29T10:02:01.444Z,1443520921.444 [ComponentRegistry](DEBUG): SyncComponent "DepthRateCalculator" handled in the control thread.
2015-09-29T10:02:01.450Z,1443520921.450 [PitchRateCalculator] Loaded
2015-09-29T10:02:01.450Z,1443520921.450 [ComponentRegistry](DEBUG): SyncComponent "PitchRateCalculator" handled in the control thread.
2015-09-29T10:02:01.462Z,1443520921.462 [SpeedCalculator] Loaded
2015-09-29T10:02:01.462Z,1443520921.462 [ComponentRegistry](DEBUG): SyncComponent "SpeedCalculator" handled in the control thread.
2015-09-29T10:02:01.479Z,1443520921.479 [TempGradientCalculator] Loaded
2015-09-29T10:02:01.479Z,1443520921.479 [ComponentRegistry](DEBUG): SyncComponent "TempGradientCalculator" handled in the control thread.
2015-09-29T10:02:01.496Z,1443520921.496 [VerticalTemperatureHomogeneityIndexCalculator] Loaded
2015-09-29T10:02:01.497Z,1443520921.497 [ComponentRegistry](DEBUG): SyncComponent "VerticalTemperatureHomogeneityIndexCalculator" handled in the control thread.
2015-09-29T10:02:01.502Z,1443520921.502 [YawRateCalculator] Loaded
2015-09-29T10:02:01.502Z,1443520921.502 [ComponentRegistry](DEBUG): SyncComponent "YawRateCalculator" handled in the control thread.
2015-09-29T10:02:01.503Z,1443520921.503 [Module Loader](DEBUG): Loaded Module: Derivation (Contains the base derivation components)
2015-09-29T10:02:01.504Z,1443520921.504 [Module Loader](DEBUG): Loading Module at Modules/Estimation.so
2015-09-29T10:02:01.615Z,1443520921.615 [StratificationFrontDetector](INFO): threshold set to: 0.399988 degC
2015-09-29T10:02:01.615Z,1443520921.615 [StratificationFrontDetector](DEBUG): (re)initializing
2015-09-29T10:02:01.616Z,1443520921.616 [StratificationFrontDetector] Loaded
2015-09-29T10:02:01.616Z,1443520921.616 [ComponentRegistry](DEBUG): SyncComponent "StratificationFrontDetector" handled in the control thread.
2015-09-29T10:02:01.616Z,1443520921.616 [Module Loader](DEBUG): Loaded Module: Estimation (Contains the base estimation components)
2015-09-29T10:02:01.617Z,1443520921.617 [Module Loader](DEBUG): Loading Module at Modules/Guidance.so
2015-09-29T10:02:01.881Z,1443520921.881 [Module Loader](DEBUG): Loaded Module: Guidance (Contains behaviors and commands)
2015-09-29T10:02:01.882Z,1443520921.882 [Module Loader](DEBUG): Loading Module at Modules/Navigation.so
2015-09-29T10:02:02.001Z,1443520922.001 [DeadReckonUsingMultipleVelocitySources] Loaded
2015-09-29T10:02:02.002Z,1443520922.002 [ComponentRegistry](DEBUG): SyncComponent "DeadReckonUsingMultipleVelocitySources" handled in the control thread.
2015-09-29T10:02:02.058Z,1443520922.058 [DeadReckonUsingSpeedCalculator] Loaded
2015-09-29T10:02:02.058Z,1443520922.058 [ComponentRegistry](DEBUG): SyncComponent "DeadReckonUsingSpeedCalculator" handled in the control thread.
2015-09-29T10:02:02.076Z,1443520922.076 [NavChart] Loaded
2015-09-29T10:02:02.076Z,1443520922.076 [ComponentRegistry](DEBUG): SyncComponent "NavChart" handled in the control thread.
2015-09-29T10:02:02.081Z,1443520922.081 [UniversalFixResidualReporter] Loaded
2015-09-29T10:02:02.082Z,1443520922.082 [ComponentRegistry](DEBUG): SyncComponent "UniversalFixResidualReporter" handled in the control thread.
2015-09-29T10:02:02.082Z,1443520922.082 [Module Loader](DEBUG): Loaded Module: Navigation (Contains the base navigation components)
2015-09-29T10:02:02.083Z,1443520922.083 [Module Loader](DEBUG): Loading Module at Modules/Sample.so
2015-09-29T10:02:02.091Z,1443520922.091 [Module Loader](DEBUG): Loaded Module: Sample (This is a Sample Module of Sample Components)
2015-09-29T10:02:02.092Z,1443520922.092 [Module Loader](DEBUG): Loading Module at Modules/Science.so
2015-09-29T10:02:02.376Z,1443520922.376 [CTD_NeilBrown] Loaded
2015-09-29T10:02:02.376Z,1443520922.376 [ComponentRegistry](DEBUG): Component "CTD_NeilBrown" handled in its own thread.
2015-09-29T10:02:02.377Z,1443520922.377 [CTD_NeilBrown ThreadHandler](DEBUG): Created PCaller Thread at 4059D4E0
2015-09-29T10:02:02.378Z,1443520922.378 [CTD_NeilBrown ThreadHandler](INFO): Protected caller Thread ID is 810
2015-09-29T10:02:02.390Z,1443520922.390 [ISUS] Loaded
2015-09-29T10:02:02.391Z,1443520922.391 [ComponentRegistry](DEBUG): SyncComponent "ISUS" handled in the control thread.
2015-09-29T10:02:02.405Z,1443520922.405 [PAR_Licor] Loaded
2015-09-29T10:02:02.405Z,1443520922.405 [ComponentRegistry](DEBUG): SyncComponent "PAR_Licor" handled in the control thread.
2015-09-29T10:02:02.457Z,1443520922.457 [WetLabsBB2FL] Loaded
2015-09-29T10:02:02.457Z,1443520922.457 [ComponentRegistry](DEBUG): Component "WetLabsBB2FL" handled in its own thread.
2015-09-29T10:02:02.458Z,1443520922.458 [WetLabsBB2FL ThreadHandler](DEBUG): Created PCaller Thread at 405CD4E0
2015-09-29T10:02:02.459Z,1443520922.459 [WetLabsBB2FL ThreadHandler](INFO): Protected caller Thread ID is 811
2015-09-29T10:02:02.459Z,1443520922.459 [Module Loader](DEBUG): Loaded Module: Science (Contains the science components)
2015-09-29T10:02:02.460Z,1443520922.460 [Module Loader](DEBUG): Loading Module at Modules/Sensor.so
2015-09-29T10:02:03.105Z,1443520923.105 [AHRS_sp3003D] Loaded
2015-09-29T10:02:03.106Z,1443520923.106 [ComponentRegistry](DEBUG): SyncComponent "AHRS_sp3003D" handled in the control thread.
2015-09-29T10:02:03.274Z,1443520923.274 [DataOverHttps] Loaded
2015-09-29T10:02:03.275Z,1443520923.275 [ComponentRegistry](DEBUG): SyncComponent "DataOverHttps" handled in the control thread.
2015-09-29T10:02:03.288Z,1443520923.288 [Depth_Keller] Loaded
2015-09-29T10:02:03.288Z,1443520923.288 [ComponentRegistry](DEBUG): SyncComponent "Depth_Keller" handled in the control thread.
2015-09-29T10:02:03.293Z,1443520923.293 [DropWeight] Loaded
2015-09-29T10:02:03.294Z,1443520923.294 [ComponentRegistry](DEBUG): SyncComponent "DropWeight" handled in the control thread.
2015-09-29T10:02:03.433Z,1443520923.433 [DVL_micro] Loaded
2015-09-29T10:02:03.433Z,1443520923.433 [ComponentRegistry](DEBUG): SyncComponent "DVL_micro" handled in the control thread.
2015-09-29T10:02:03.529Z,1443520923.529 [NAL9602] Loaded
2015-09-29T10:02:03.529Z,1443520923.529 [ComponentRegistry](DEBUG): SyncComponent "NAL9602" handled in the control thread.
2015-09-29T10:02:03.572Z,1443520923.572 [Onboard] Loaded
2015-09-29T10:02:03.572Z,1443520923.572 [ComponentRegistry](DEBUG): SyncComponent "Onboard" handled in the control thread.
2015-09-29T10:02:03.584Z,1443520923.584 [Radio_Surface] Loaded
2015-09-29T10:02:03.584Z,1443520923.584 [ComponentRegistry](DEBUG): Component "Radio_Surface" handled in its own thread.
2015-09-29T10:02:03.585Z,1443520923.585 [Radio_Surface ThreadHandler](DEBUG): Created PCaller Thread at 408114E0
2015-09-29T10:02:03.585Z,1443520923.585 [Radio_Surface ThreadHandler](INFO): Protected caller Thread ID is 812
2015-09-29T10:02:03.728Z,1443520923.728 [DAT] Loaded
2015-09-29T10:02:03.728Z,1443520923.728 [ComponentRegistry](DEBUG): SyncComponent "DAT" handled in the control thread.
2015-09-29T10:02:03.735Z,1443520923.735 [SCPI] Loaded
2015-09-29T10:02:03.735Z,1443520923.735 [ComponentRegistry](DEBUG): SyncComponent "SCPI" handled in the control thread.
2015-09-29T10:02:03.736Z,1443520923.736 [Module Loader](DEBUG): Loaded Module: Sensor (Contains the sensor components)
2015-09-29T10:02:03.737Z,1443520923.737 [Module Loader](DEBUG): Loading Module at Modules/Servo.so
2015-09-29T10:02:03.858Z,1443520923.858 [BuoyancyServo] Loaded
2015-09-29T10:02:03.859Z,1443520923.859 [ComponentRegistry](DEBUG): SyncComponent "BuoyancyServo" handled in the control thread.
2015-09-29T10:02:03.871Z,1443520923.871 [ElevatorServo] Loaded
2015-09-29T10:02:03.872Z,1443520923.872 [ComponentRegistry](DEBUG): SyncComponent "ElevatorServo" handled in the control thread.
2015-09-29T10:02:03.883Z,1443520923.883 [MassServo] Loaded
2015-09-29T10:02:03.884Z,1443520923.884 [ComponentRegistry](DEBUG): SyncComponent "MassServo" handled in the control thread.
2015-09-29T10:02:03.896Z,1443520923.896 [RudderServo] Loaded
2015-09-29T10:02:03.896Z,1443520923.896 [ComponentRegistry](DEBUG): SyncComponent "RudderServo" handled in the control thread.
2015-09-29T10:02:03.907Z,1443520923.907 [ThrusterServo] Loaded
2015-09-29T10:02:03.907Z,1443520923.907 [ComponentRegistry](DEBUG): SyncComponent "ThrusterServo" handled in the control thread.
2015-09-29T10:02:03.908Z,1443520923.908 [Module Loader](DEBUG): Loaded Module: Servo (This is the module containing motor controllers)
2015-09-29T10:02:03.909Z,1443520923.909 [Module Loader](DEBUG): Loading Module at Modules/Simulator.so
2015-09-29T10:02:04.090Z,1443520924.090 [InternalSim] Loaded
2015-09-29T10:02:04.091Z,1443520924.091 [ComponentRegistry](DEBUG): SyncComponent "InternalSim" handled in the control thread.
2015-09-29T10:02:04.091Z,1443520924.091 [Module Loader](DEBUG): Loaded Module: Simulator (This is the module containing the Simulator)
2015-09-29T10:02:04.092Z,1443520924.092 [Module Loader](DEBUG): Loading Module at Modules/Trigger.so
2015-09-29T10:02:04.131Z,1443520924.131 [Module Loader](DEBUG): Loaded Module: Trigger (Contains triggers for use in missions)
2015-09-29T10:02:04.135Z,1443520924.135 [ComponentRegistry](DEBUG): SyncComponent "MissionManager" handled in the control thread.
2015-09-29T10:02:04.136Z,1443520924.136 [ComponentRegistry](DEBUG): SyncComponent "Reporter" handled in the control thread.
2015-09-29T10:02:04.143Z,1443520924.143 [ComponentRegistry](DEBUG): Component "NavChartDb" handled in its own thread.
2015-09-29T10:02:04.144Z,1443520924.144 [NavChartDb ThreadHandler](DEBUG): Created PCaller Thread at 408BF4E0
2015-09-29T10:02:04.144Z,1443520924.144 [NavChartDb ThreadHandler](INFO): Protected caller Thread ID is 813
2015-09-29T10:02:04.149Z,1443520924.149 [Supervisor](INFO): Main Thread ID is 760
2015-09-29T10:02:04.149Z,1443520924.149 [Supervisor](DEBUG): Running supervisor.
2015-09-29T10:02:04.150Z,1443520924.150 [CommandLine ThreadHandler](INFO): Handler Thread ID is 814
2015-09-29T10:02:04.153Z,1443520924.153 [controlThread ThreadHandler](INFO): Handler Thread ID is 815
2015-09-29T10:02:04.153Z,1443520924.153 [controlThread](DEBUG): Initializing ControlThread
2015-09-29T10:02:04.154Z,1443520924.154 [VerticalControl](DEBUG): Initialize VerticalControlComponent.
2015-09-29T10:02:04.156Z,1443520924.156 [HorizontalControl](DEBUG): Initialize HorizontalControlComponent.
2015-09-29T10:02:04.157Z,1443520924.157 [SpeedControl](DEBUG): Initialize SpeedControlComponent.
2015-09-29T10:02:04.157Z,1443520924.157 [LoopControl](DEBUG): Initialize LoopControlComponent.
2015-09-29T10:02:04.158Z,1443520924.158 [SBIT](INFO): Initialize SBIT Component.
2015-09-29T10:02:04.158Z,1443520924.158 [SBIT](IMPORTANT): Tethys CM Info: SVN revision:12634
2015-09-29T10:02:04.159Z,1443520924.159 [SBIT](INFO): Kernel Reporting Different Release From Configuration.
Kernel Expected: 2.6.32-45-generic-pae
Kernel Reported: 2.6.27.8
2015-09-29T10:02:04.160Z,1443520924.160 [SBIT](INFO): Kernel Reporting Different Version From Configuration.
Kernel Expected: #102-Ubuntu SMP Wed Jan 2 22:10:16 UTC 2013
Kernel Reported: #641 PREEMPT Mon Sep 28 16:45:10 PDT 2015
2015-09-29T10:02:04.161Z,1443520924.161 [SBIT](INFO): Beginning SBIT in 20.000000 seconds.
2015-09-29T10:02:04.161Z,1443520924.161 [IBIT](INFO): Initialize IBIT Component.
2015-09-29T10:02:04.162Z,1443520924.162 [CBIT](DEBUG): Initialize CBIT Component.
2015-09-29T10:02:04.162Z,1443520924.162 [CBIT](FAULT): LAST RESTART WAS UNINTENTIONAL.
2015-09-29T10:02:04.162Z,1443520924.162 [CBIT](INFO): Last reboot was NOT due to watchdog timer.
2015-09-29T10:02:04.163Z,1443520924.163 [DepthRateCalculator](DEBUG): Initializing DepthRateCalculator.
2015-09-29T10:02:04.163Z,1443520924.163 [PitchRateCalculator](DEBUG): Initializing PitchRateCalculator.
2015-09-29T10:02:04.163Z,1443520924.163 [SpeedCalculator](DEBUG): Initializing SpeedCalculator.
2015-09-29T10:02:04.164Z,1443520924.164 [TempGradientCalculator](DEBUG): Initializing TempGradientCalculator.
2015-09-29T10:02:04.164Z,1443520924.164 [VerticalTemperatureHomogeneityIndexCalculator](DEBUG): (re)initializing
2015-09-29T10:02:04.165Z,1443520924.165 [YawRateCalculator](DEBUG): Initializing YawRateCalculator.
2015-09-29T10:02:04.165Z,1443520924.165 [DeadReckonUsingMultipleVelocitySources](DEBUG): Initializing DeadReckonUsingMultipleVelocitySources component.
2015-09-29T10:02:04.166Z,1443520924.166 [DeadReckonUsingMultipleVelocitySources](INFO): Will consider orientation measurement stale after 120s.
2015-09-29T10:02:04.167Z,1443520924.167 [DeadReckonUsingMultipleVelocitySources](INFO): Will consider velocity measurement stale after 20s.
2015-09-29T10:02:04.167Z,1443520924.167 [DeadReckonUsingSpeedCalculator](DEBUG): Initializing DeadReckonUsingSpeedCalculator component.
2015-09-29T10:02:04.167Z,1443520924.167 [DeadReckonUsingSpeedCalculator](INFO): Will consider orientation measurement stale after 120s.
2015-09-29T10:02:04.168Z,1443520924.168 [DeadReckonUsingSpeedCalculator](INFO): Will consider velocity measurement stale after 20s.
2015-09-29T10:02:04.168Z,1443520924.168 [NavChart](DEBUG): Initialize NavChart Navigation.
2015-09-29T10:02:04.168Z,1443520924.168 [UniversalFixResidualReporter](DEBUG): Initializing UniversalFixResidualReporter component.
2015-09-29T10:02:04.174Z,1443520924.174 [InternalSim](DEBUG):  InternalSim initializing...
2015-09-29T10:02:04.192Z,1443520924.192 [logger ThreadHandler](INFO): Handler Thread ID is 816
2015-09-29T10:02:04.232Z,1443520924.232 [CTD_NeilBrown ThreadHandler](INFO): Handler Thread ID is 817
2015-09-29T10:02:04.252Z,1443520924.252 [WetLabsBB2FL ThreadHandler](INFO): Handler Thread ID is 818
2015-09-29T10:02:04.340Z,1443520924.340 [Radio_Surface ThreadHandler](INFO): Handler Thread ID is 819
2015-09-29T10:02:04.401Z,1443520924.401 [NavChartDb ThreadHandler](INFO): Handler Thread ID is 820
2015-09-29T10:02:04.409Z,1443520924.409 [NavChartDb](INFO): Looking for Electronic Nav Chart files in directory: Resources
2015-09-29T10:02:04.411Z,1443520924.411 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US1WC07M.000
2015-09-29T10:02:04.411Z,1443520924.411 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US2WC11M.000
2015-09-29T10:02:04.411Z,1443520924.411 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US3CA52M.000
2015-09-29T10:02:04.412Z,1443520924.412 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US4CA60M.000
2015-09-29T10:02:04.412Z,1443520924.412 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA50M.000
2015-09-29T10:02:04.412Z,1443520924.412 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA61M.000
2015-09-29T10:02:04.412Z,1443520924.412 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA62M.000
2015-09-29T10:02:04.413Z,1443520924.413 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA83M.000
2015-09-29T10:02:04.444Z,1443520924.444 [MissionManager](INFO): Loading Mission: Missions/Startup.xml
2015-09-29T10:02:04.483Z,1443520924.483 [Startup:A.GoToSurface](DEBUG): Construct GoToSurface.
2015-09-29T10:02:04.506Z,1443520924.506 [MissionManager](DEBUG): 
<?xml version="1.0" encoding="UTF-8"?>
<Mission xmlns="Tethys"
       xmlns:Control="Tethys/Control"
       xmlns:Guidance="Tethys/Guidance" 
       xmlns:Units="Tethys/Units"
       xmlns:Universal="Tethys/Universal"
       xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
       xsi:schemaLocation="Tethys http://okeanids.mbari.org/tethys/Xml/Tethys.xsd
                           Tethys/Control http://okeanids.mbari.org/tethys/Xml/Control.xsd
                           Tethys/Guidance http://okeanids.mbari.org/tethys/Xml/Guidance.xsd
                           Tethys/Units http://okeanids.mbari.org/tethys/Xml/Units.xsd
                           Tethys/Universal http://okeanids.mbari.org/tethys/Xml/Universal.xsd"
       Id="Startup">

    <Guidance:GoToSurface>
        <Progression/>
    </Guidance:GoToSurface>

    <Aggregate Id="StartupSatComms">

        <Sequence/>

        <ReadDatum>
            <Timeout Duration="P1M" />
            <Universal:latitude_fix/>
        </ReadDatum>

        <ReadDatum>
            <Timeout Duration="P1M" />
            <Universal:platform_communications/>
        </ReadDatum>

    </Aggregate>

</Mission>


2015-09-29T10:02:04.507Z,1443520924.507 [MissionManager](INFO): Loading Mission: Missions/Default.xml
2015-09-29T10:02:04.579Z,1443520924.579 [MissionManager](INFO): DefineArg Default.ElapsedSinceDefaultStarted = 0.000000 min
2015-09-29T10:02:04.580Z,1443520924.580 [Default:A.GoToSurface](DEBUG): Construct GoToSurface.
2015-09-29T10:02:04.598Z,1443520924.598 [Default:CheckIn:Read_Iridium:A_Timeout:A.Execute](DEBUG): Construct Execute.
2015-09-29T10:02:04.621Z,1443520924.621 [Default:CheckIn:C.Wait](DEBUG): Construct Wait.
2015-09-29T10:02:04.644Z,1443520924.644 [Default:D.Execute](DEBUG): Construct Execute.
2015-09-29T10:02:04.647Z,1443520924.647 [MissionManager](DEBUG): 
<?xml version="1.0" encoding="UTF-8"?>
<Mission xmlns="Tethys"
xmlns:Guidance="Tethys/Guidance"
xmlns:Units="Tethys/Units"
xmlns:Universal="Tethys/Universal"
xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
xsi:schemaLocation="Tethys http://okeanids.mbari.org/tethys/Xml/Tethys.xsd
Tethys/Guidance http://okeanids.mbari.org/tethys/Xml/Guidance.xsd
Tethys/Units http://okeanids.mbari.org/tethys/Xml/Units.xsd
Tethys/Universal http://okeanids.mbari.org/tethys/Xml/Universal.xsd"
Id="Default">

    <DefineArg Name="ElapsedSinceDefaultStarted"><Units:minute/><Value>0</Value></DefineArg>

    <Guidance:GoToSurface>
        <Progression/>
    </Guidance:GoToSurface>

    <Aggregate Id="CheckIn">

        <Sequence Repeat="288"/>

        <ReadDatum Id="Read_GPS">
            <Sequence/>
            <Timeout Duration="P5M"/>
            <Universal:time_fix/>
        </ReadDatum>

        <ReadDatum Id="Read_Iridium">
            <Sequence/>
            <Timeout Duration="P2H">
                <Guidance:Execute>
                    <Sequence/>
                    <Setting><Guidance:Execute.command/><String>Burn 300</String></Setting>
                </Guidance:Execute>
                <Syslog Severity="Critical">Dropped weight due to communications timeout.</Syslog>
            </Timeout>
            <Universal:platform_communications/>
        </ReadDatum>

        <Guidance:Wait>
            <Sequence/>
            <Setting><Guidance:Wait.duration/><Units:minute/><Value>5</Value></Setting>
        </Guidance:Wait>

        <Assign><Sequence/><Arg Name="ElapsedSinceDefaultStarted"/><Elapsed><Universal:mission_started/></Elapsed></Assign>

        <Syslog Severity="Important">Default mission has been running for <Arg Name="ElapsedSinceDefaultStarted"/><Units:minute/></Syslog>

    </Aggregate>

    <Syslog Severity="Important">Restarting logs and Default mission.</Syslog>

    <Guidance:Execute>
        <Sequence/>
        <Setting><Guidance:Execute.command/><String>restart logs</String></Setting>
    </Guidance:Execute>

</Mission>


2015-09-29T10:02:04.664Z,1443520924.664 [controlThread](DEBUG): Component order: CycleStarter,InternalSim,ISUS,PAR_Licor,AHRS_sp3003D,DataOverHttps,Depth_Keller,DropWeight,DVL_micro,NAL9602,Onboard,DAT,SCPI,PAR_Licor,Depth_Keller,DepthRateCalculator,PitchRateCalculator,SpeedCalculator,TempGradientCalculator,VerticalTemperatureHomogeneityIndexCalculator,YawRateCalculator,StratificationFrontDetector,DeadReckonUsingMultipleVelocitySources,DeadReckonUsingSpeedCalculator,NavChart,UniversalFixResidualReporter,MissionManager,VerticalControl,HorizontalControl,SpeedControl,LoopControl,BuoyancyServo,ElevatorServo,MassServo,RudderServo,ThrusterServo,SBIT,IBIT,CBIT,Reporter,LogSplitter,
2015-09-29T10:02:04.879Z,1443520924.879 [DVL_micro](INFO): Initializing
2015-09-29T10:02:05.040Z,1443520925.040 [DeadReckonUsingMultipleVelocitySources](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T10:02:05.052Z,1443520925.052 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T10:02:05.158Z,1443520925.158 [BuoyancyServo](DEBUG): Initializing BuoyancyServo.
2015-09-29T10:02:05.179Z,1443520925.179 [ElevatorServo](DEBUG): Initializing ElevatorServo.
2015-09-29T10:02:05.201Z,1443520925.201 [MassServo](DEBUG): Initializing MassServo.
2015-09-29T10:02:05.206Z,1443520925.206 [RudderServo](DEBUG): Initializing RudderServo.
2015-09-29T10:02:05.231Z,1443520925.231 [ThrusterServo](DEBUG): Initializing ThrusterServo.
2015-09-29T10:02:05.481Z,1443520925.481 [DeadReckonUsingMultipleVelocitySources](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T10:02:05.482Z,1443520925.482 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T10:02:14.347Z,1443520934.347 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T10:02:14.678Z,1443520934.678 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T10:02:14.822Z,1443520934.822 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T10:02:15.222Z,1443520935.222 [DataOverHttps](INFO): setting available, lastComms_.elapsed()=0.003000
2015-09-29T10:02:15.226Z,1443520935.226 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T10:02:15.621Z,1443520935.621 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T10:02:16.022Z,1443520936.022 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T10:02:16.420Z,1443520936.420 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T10:02:16.820Z,1443520936.820 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T10:02:17.220Z,1443520937.220 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T10:02:17.620Z,1443520937.620 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T10:02:18.022Z,1443520938.022 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T10:02:18.422Z,1443520938.422 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T10:02:18.823Z,1443520938.823 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T10:02:19.222Z,1443520939.222 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T10:02:19.621Z,1443520939.621 [NAL9602](INFO): No messages in MT queue
2015-09-29T10:02:19.622Z,1443520939.622 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T10:02:20.023Z,1443520940.023 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T10:02:20.422Z,1443520940.422 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T10:02:20.822Z,1443520940.822 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T10:02:21.223Z,1443520941.223 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T10:02:21.622Z,1443520941.622 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T10:02:22.025Z,1443520942.025 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T10:02:22.422Z,1443520942.422 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T10:02:22.822Z,1443520942.822 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T10:02:23.223Z,1443520943.223 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T10:02:23.623Z,1443520943.623 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T10:02:24.022Z,1443520944.022 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T10:02:24.422Z,1443520944.422 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T10:02:24.822Z,1443520944.822 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T10:02:24.836Z,1443520944.836 [SBIT](IMPORTANT): Beginning Startup BIT
2015-09-29T10:02:25.223Z,1443520945.223 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T10:02:25.622Z,1443520945.622 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T10:02:26.022Z,1443520946.022 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T10:02:26.423Z,1443520946.423 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T10:02:26.822Z,1443520946.822 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T10:02:27.223Z,1443520947.223 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T10:02:27.623Z,1443520947.623 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T10:02:28.022Z,1443520948.022 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T10:02:28.424Z,1443520948.424 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T10:02:28.822Z,1443520948.822 [D