2015-09-29T09:54:01.232Z,1443520441.232 [Supervisor](DEBUG): Initializing supervisor.
2015-09-29T09:54:01.235Z,1443520441.235 [SyncHandler](DEBUG): Created PCaller Thread at 4034C4E0
2015-09-29T09:54:01.235Z,1443520441.235 [SyncHandler](INFO): Protected caller Thread ID is 762
2015-09-29T09:54:01.236Z,1443520441.236 [ComponentRegistry](DEBUG): Component "controlThread" handled in its own thread.
2015-09-29T09:54:01.239Z,1443520441.239 [controlThread ThreadHandler](DEBUG): Created PCaller Thread at 4037C4E0
2015-09-29T09:54:01.239Z,1443520441.239 [controlThread ThreadHandler](INFO): Protected caller Thread ID is 763
2015-09-29T09:54:01.242Z,1443520441.242 [ComponentRegistry](DEBUG): SyncComponent "CycleStarter" handled in the control thread.
2015-09-29T09:54:01.254Z,1443520441.254 [ComponentRegistry](DEBUG): Component "CommandLine" handled in its own thread.
2015-09-29T09:54:01.259Z,1443520441.259 [CommandLine ThreadHandler](DEBUG): Created PCaller Thread at 403AC4E0
2015-09-29T09:54:01.259Z,1443520441.259 [CommandLine ThreadHandler](INFO): Protected caller Thread ID is 764
2015-09-29T09:54:01.260Z,1443520441.260 [ComponentRegistry](DEBUG): Component "logger" handled in its own thread.
2015-09-29T09:54:01.263Z,1443520441.263 [logger ThreadHandler](DEBUG): Created PCaller Thread at 403DC4E0
2015-09-29T09:54:01.263Z,1443520441.263 [logger ThreadHandler](INFO): Protected caller Thread ID is 765
2015-09-29T09:54:01.265Z,1443520441.265 [ComponentRegistry](DEBUG): SyncComponent "LogSplitter" handled in the control thread.
2015-09-29T09:54:01.266Z,1443520441.266 [Supervisor](INFO): Looking for Config files in directory: Config/
2015-09-29T09:54:01.269Z,1443520441.269 [Supervisor](INFO): Opening Config file at: Config/Control.cfg
2015-09-29T09:54:01.660Z,1443520441.660 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Control
2015-09-29T09:54:01.662Z,1443520441.662 [Supervisor](INFO): Opening Config file at: Config/BIT.cfg
2015-09-29T09:54:01.855Z,1443520441.855 [ComponentRegistry](DEBUG): Loaded Config Component "Config/BIT
2015-09-29T09:54:01.857Z,1443520441.857 [Supervisor](INFO): Opening Config file at: Config/Derivation.cfg
2015-09-29T09:54:01.999Z,1443520441.999 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Derivation
2015-09-29T09:54:02.000Z,1443520442.000 [Supervisor](INFO): Opening Config file at: Config/Estimation.cfg
2015-09-29T09:54:02.147Z,1443520442.147 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Estimation
2015-09-29T09:54:02.148Z,1443520442.148 [Supervisor](INFO): Opening Config file at: Config/Guidance.cfg
2015-09-29T09:54:02.243Z,1443520442.243 [Supervisor](INFO): Opening Config file at: Config/Navigation.cfg
2015-09-29T09:54:02.463Z,1443520442.463 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Navigation
2015-09-29T09:54:02.464Z,1443520442.464 [Supervisor](INFO): Opening Config file at: Config/Sample.cfg
2015-09-29T09:54:02.559Z,1443520442.559 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Sample
2015-09-29T09:54:02.560Z,1443520442.560 [Supervisor](INFO): Opening Config file at: Config/Science.cfg
2015-09-29T09:54:02.874Z,1443520442.874 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Science
2015-09-29T09:54:02.875Z,1443520442.875 [Supervisor](INFO): Opening Config file at: Config/Sensor.cfg
2015-09-29T09:54:03.280Z,1443520443.280 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Sensor
2015-09-29T09:54:03.280Z,1443520443.280 [Supervisor](INFO): Opening Config file at: Config/Servo.cfg
2015-09-29T09:54:03.632Z,1443520443.632 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Servo
2015-09-29T09:54:03.634Z,1443520443.634 [Supervisor](INFO): Opening Config file at: Config/Simulator.cfg
2015-09-29T09:54:04.224Z,1443520444.224 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Simulator
2015-09-29T09:54:04.225Z,1443520444.225 [Supervisor](INFO): Opening Config file at: Config/logger.cfg
2015-09-29T09:54:04.456Z,1443520444.456 [ComponentRegistry](DEBUG): Loaded Config Component "Config/logger
2015-09-29T09:54:04.456Z,1443520444.456 [Supervisor](INFO): Opening Config file at: Config/secure.cfg
2015-09-29T09:54:04.568Z,1443520444.568 [ComponentRegistry](DEBUG): Loaded Config Component "Config/secure
2015-09-29T09:54:04.568Z,1443520444.568 [Supervisor](INFO): Opening Config file at: Config/vehicle.cfg
2015-09-29T09:54:05.090Z,1443520445.090 [ComponentRegistry](DEBUG): Loaded Config Component "Config/vehicle
2015-09-29T09:54:05.091Z,1443520445.091 [Supervisor](INFO): Opening Config file at: Config/workSite.cfg
2015-09-29T09:54:05.217Z,1443520445.217 [ComponentRegistry](DEBUG): Loaded Config Component "Config/workSite
2015-09-29T09:54:05.218Z,1443520445.218 [Supervisor](INFO): Looking for Config files in directory: Config/(none)/
2015-09-29T09:54:05.219Z,1443520445.219 [Supervisor](FAULT): Ignoring configuration overrides from Data/persisted.cfg
2015-09-29T09:54:05.223Z,1443520445.223 [Module Loader](DEBUG): Loading Module at Modules/Control.so
2015-09-29T09:54:05.298Z,1443520445.298 [VerticalControl](DEBUG): Construct VerticalControl.
2015-09-29T09:54:05.431Z,1443520445.431 [VerticalControl] Loaded
2015-09-29T09:54:05.431Z,1443520445.431 [ComponentRegistry](DEBUG): SyncComponent "VerticalControl" handled in the control thread.
2015-09-29T09:54:05.432Z,1443520445.432 [HorizontalControl](DEBUG): Construct HorizontalControl.
2015-09-29T09:54:05.516Z,1443520445.516 [HorizontalControl] Loaded
2015-09-29T09:54:05.517Z,1443520445.517 [ComponentRegistry](DEBUG): SyncComponent "HorizontalControl" handled in the control thread.
2015-09-29T09:54:05.517Z,1443520445.517 [SpeedControl](DEBUG): Construct SpeedControl.
2015-09-29T09:54:05.523Z,1443520445.523 [SpeedControl] Loaded
2015-09-29T09:54:05.524Z,1443520445.524 [ComponentRegistry](DEBUG): SyncComponent "SpeedControl" handled in the control thread.
2015-09-29T09:54:05.524Z,1443520445.524 [LoopControl](DEBUG): Construct LoopControl.
2015-09-29T09:54:05.525Z,1443520445.525 [LoopControl] Loaded
2015-09-29T09:54:05.525Z,1443520445.525 [ComponentRegistry](DEBUG): SyncComponent "LoopControl" handled in the control thread.
2015-09-29T09:54:05.526Z,1443520445.526 [Module Loader](DEBUG): Loaded Module: Control (Contains the Control components, such as Depth, Heading, and Speed Control)
2015-09-29T09:54:05.526Z,1443520445.526 [Module Loader](DEBUG): Loading Module at Modules/BIT.so
2015-09-29T09:54:05.685Z,1443520445.685 [SBIT](DEBUG): Construct Startup Built In Test.
2015-09-29T09:54:05.697Z,1443520445.697 [SBIT] Loaded
2015-09-29T09:54:05.697Z,1443520445.697 [ComponentRegistry](DEBUG): SyncComponent "SBIT" handled in the control thread.
2015-09-29T09:54:05.698Z,1443520445.698 [IBIT](DEBUG): Construct Initiated Built In Test.
2015-09-29T09:54:05.732Z,1443520445.732 [IBIT] Loaded
2015-09-29T09:54:05.732Z,1443520445.732 [ComponentRegistry](DEBUG): SyncComponent "IBIT" handled in the control thread.
2015-09-29T09:54:05.734Z,1443520445.734 [CBIT](DEBUG): Construct Continuous Built In Test.
2015-09-29T09:54:05.888Z,1443520445.888 [CBIT] Loaded
2015-09-29T09:54:05.889Z,1443520445.889 [ComponentRegistry](DEBUG): SyncComponent "CBIT" handled in the control thread.
2015-09-29T09:54:05.889Z,1443520445.889 [Module Loader](DEBUG): Loaded Module: BIT (Contains the BuiltInTest components, such as C Built In Test)
2015-09-29T09:54:05.890Z,1443520445.890 [Module Loader](DEBUG): Loading Module at Modules/Derivation.so
2015-09-29T09:54:05.929Z,1443520445.929 [DepthRateCalculator] Loaded
2015-09-29T09:54:05.929Z,1443520445.929 [ComponentRegistry](DEBUG): SyncComponent "DepthRateCalculator" handled in the control thread.
2015-09-29T09:54:05.939Z,1443520445.939 [PitchRateCalculator] Loaded
2015-09-29T09:54:05.939Z,1443520445.939 [ComponentRegistry](DEBUG): SyncComponent "PitchRateCalculator" handled in the control thread.
2015-09-29T09:54:05.951Z,1443520445.951 [SpeedCalculator] Loaded
2015-09-29T09:54:05.951Z,1443520445.951 [ComponentRegistry](DEBUG): SyncComponent "SpeedCalculator" handled in the control thread.
2015-09-29T09:54:05.968Z,1443520445.968 [TempGradientCalculator] Loaded
2015-09-29T09:54:05.968Z,1443520445.968 [ComponentRegistry](DEBUG): SyncComponent "TempGradientCalculator" handled in the control thread.
2015-09-29T09:54:05.989Z,1443520445.989 [VerticalTemperatureHomogeneityIndexCalculator] Loaded
2015-09-29T09:54:05.989Z,1443520445.989 [ComponentRegistry](DEBUG): SyncComponent "VerticalTemperatureHomogeneityIndexCalculator" handled in the control thread.
2015-09-29T09:54:05.995Z,1443520445.995 [YawRateCalculator] Loaded
2015-09-29T09:54:05.995Z,1443520445.995 [ComponentRegistry](DEBUG): SyncComponent "YawRateCalculator" handled in the control thread.
2015-09-29T09:54:05.996Z,1443520445.996 [Module Loader](DEBUG): Loaded Module: Derivation (Contains the base derivation components)
2015-09-29T09:54:05.996Z,1443520445.996 [Module Loader](DEBUG): Loading Module at Modules/Estimation.so
2015-09-29T09:54:06.112Z,1443520446.112 [StratificationFrontDetector](INFO): threshold set to: 0.399988 degC
2015-09-29T09:54:06.112Z,1443520446.112 [StratificationFrontDetector](DEBUG): (re)initializing
2015-09-29T09:54:06.112Z,1443520446.112 [StratificationFrontDetector] Loaded
2015-09-29T09:54:06.112Z,1443520446.112 [ComponentRegistry](DEBUG): SyncComponent "StratificationFrontDetector" handled in the control thread.
2015-09-29T09:54:06.113Z,1443520446.113 [Module Loader](DEBUG): Loaded Module: Estimation (Contains the base estimation components)
2015-09-29T09:54:06.114Z,1443520446.114 [Module Loader](DEBUG): Loading Module at Modules/Guidance.so
2015-09-29T09:54:06.405Z,1443520446.405 [Module Loader](DEBUG): Loaded Module: Guidance (Contains behaviors and commands)
2015-09-29T09:54:06.405Z,1443520446.405 [Module Loader](DEBUG): Loading Module at Modules/Navigation.so
2015-09-29T09:54:06.530Z,1443520446.530 [DeadReckonUsingMultipleVelocitySources] Loaded
2015-09-29T09:54:06.530Z,1443520446.530 [ComponentRegistry](DEBUG): SyncComponent "DeadReckonUsingMultipleVelocitySources" handled in the control thread.
2015-09-29T09:54:06.590Z,1443520446.590 [DeadReckonUsingSpeedCalculator] Loaded
2015-09-29T09:54:06.591Z,1443520446.591 [ComponentRegistry](DEBUG): SyncComponent "DeadReckonUsingSpeedCalculator" handled in the control thread.
2015-09-29T09:54:06.612Z,1443520446.612 [NavChart] Loaded
2015-09-29T09:54:06.613Z,1443520446.613 [ComponentRegistry](DEBUG): SyncComponent "NavChart" handled in the control thread.
2015-09-29T09:54:06.618Z,1443520446.618 [UniversalFixResidualReporter] Loaded
2015-09-29T09:54:06.618Z,1443520446.618 [ComponentRegistry](DEBUG): SyncComponent "UniversalFixResidualReporter" handled in the control thread.
2015-09-29T09:54:06.619Z,1443520446.619 [Module Loader](DEBUG): Loaded Module: Navigation (Contains the base navigation components)
2015-09-29T09:54:06.619Z,1443520446.619 [Module Loader](DEBUG): Loading Module at Modules/Sample.so
2015-09-29T09:54:06.628Z,1443520446.628 [Module Loader](DEBUG): Loaded Module: Sample (This is a Sample Module of Sample Components)
2015-09-29T09:54:06.629Z,1443520446.629 [Module Loader](DEBUG): Loading Module at Modules/Science.so
2015-09-29T09:54:06.928Z,1443520446.928 [CTD_NeilBrown] Loaded
2015-09-29T09:54:06.928Z,1443520446.928 [ComponentRegistry](DEBUG): Component "CTD_NeilBrown" handled in its own thread.
2015-09-29T09:54:06.931Z,1443520446.931 [CTD_NeilBrown ThreadHandler](DEBUG): Created PCaller Thread at 4059D4E0
2015-09-29T09:54:06.931Z,1443520446.931 [CTD_NeilBrown ThreadHandler](INFO): Protected caller Thread ID is 811
2015-09-29T09:54:06.944Z,1443520446.944 [ISUS] Loaded
2015-09-29T09:54:06.944Z,1443520446.944 [ComponentRegistry](DEBUG): SyncComponent "ISUS" handled in the control thread.
2015-09-29T09:54:06.959Z,1443520446.959 [PAR_Licor] Loaded
2015-09-29T09:54:06.959Z,1443520446.959 [ComponentRegistry](DEBUG): SyncComponent "PAR_Licor" handled in the control thread.
2015-09-29T09:54:07.014Z,1443520447.014 [WetLabsBB2FL] Loaded
2015-09-29T09:54:07.019Z,1443520447.019 [ComponentRegistry](DEBUG): Component "WetLabsBB2FL" handled in its own thread.
2015-09-29T09:54:07.023Z,1443520447.023 [WetLabsBB2FL ThreadHandler](DEBUG): Created PCaller Thread at 405CD4E0
2015-09-29T09:54:07.023Z,1443520447.023 [WetLabsBB2FL ThreadHandler](INFO): Protected caller Thread ID is 812
2015-09-29T09:54:07.024Z,1443520447.024 [Module Loader](DEBUG): Loaded Module: Science (Contains the science components)
2015-09-29T09:54:07.024Z,1443520447.024 [Module Loader](DEBUG): Loading Module at Modules/Sensor.so
2015-09-29T09:54:07.777Z,1443520447.777 [AHRS_sp3003D] Loaded
2015-09-29T09:54:07.777Z,1443520447.777 [ComponentRegistry](DEBUG): SyncComponent "AHRS_sp3003D" handled in the control thread.
2015-09-29T09:54:07.972Z,1443520447.972 [DataOverHttps] Loaded
2015-09-29T09:54:07.972Z,1443520447.972 [ComponentRegistry](DEBUG): SyncComponent "DataOverHttps" handled in the control thread.
2015-09-29T09:54:07.986Z,1443520447.986 [Depth_Keller] Loaded
2015-09-29T09:54:07.986Z,1443520447.986 [ComponentRegistry](DEBUG): SyncComponent "Depth_Keller" handled in the control thread.
2015-09-29T09:54:07.995Z,1443520447.995 [DropWeight] Loaded
2015-09-29T09:54:07.996Z,1443520447.996 [ComponentRegistry](DEBUG): SyncComponent "DropWeight" handled in the control thread.
2015-09-29T09:54:08.147Z,1443520448.147 [DVL_micro] Loaded
2015-09-29T09:54:08.147Z,1443520448.147 [ComponentRegistry](DEBUG): SyncComponent "DVL_micro" handled in the control thread.
2015-09-29T09:54:08.255Z,1443520448.255 [NAL9602] Loaded
2015-09-29T09:54:08.255Z,1443520448.255 [ComponentRegistry](DEBUG): SyncComponent "NAL9602" handled in the control thread.
2015-09-29T09:54:08.302Z,1443520448.302 [Onboard] Loaded
2015-09-29T09:54:08.302Z,1443520448.302 [ComponentRegistry](DEBUG): SyncComponent "Onboard" handled in the control thread.
2015-09-29T09:54:08.314Z,1443520448.314 [Radio_Surface] Loaded
2015-09-29T09:54:08.314Z,1443520448.314 [ComponentRegistry](DEBUG): Component "Radio_Surface" handled in its own thread.
2015-09-29T09:54:08.323Z,1443520448.323 [Radio_Surface ThreadHandler](DEBUG): Created PCaller Thread at 408114E0
2015-09-29T09:54:08.323Z,1443520448.323 [Radio_Surface ThreadHandler](INFO): Protected caller Thread ID is 813
2015-09-29T09:54:08.482Z,1443520448.482 [DAT] Loaded
2015-09-29T09:54:08.482Z,1443520448.482 [ComponentRegistry](DEBUG): SyncComponent "DAT" handled in the control thread.
2015-09-29T09:54:08.488Z,1443520448.488 [SCPI] Loaded
2015-09-29T09:54:08.489Z,1443520448.489 [ComponentRegistry](DEBUG): SyncComponent "SCPI" handled in the control thread.
2015-09-29T09:54:08.489Z,1443520448.489 [Module Loader](DEBUG): Loaded Module: Sensor (Contains the sensor components)
2015-09-29T09:54:08.490Z,1443520448.490 [Module Loader](DEBUG): Loading Module at Modules/Servo.so
2015-09-29T09:54:08.621Z,1443520448.621 [BuoyancyServo] Loaded
2015-09-29T09:54:08.622Z,1443520448.622 [ComponentRegistry](DEBUG): SyncComponent "BuoyancyServo" handled in the control thread.
2015-09-29T09:54:08.638Z,1443520448.638 [ElevatorServo] Loaded
2015-09-29T09:54:08.639Z,1443520448.639 [ComponentRegistry](DEBUG): SyncComponent "ElevatorServo" handled in the control thread.
2015-09-29T09:54:08.650Z,1443520448.650 [MassServo] Loaded
2015-09-29T09:54:08.651Z,1443520448.651 [ComponentRegistry](DEBUG): SyncComponent "MassServo" handled in the control thread.
2015-09-29T09:54:08.663Z,1443520448.663 [RudderServo] Loaded
2015-09-29T09:54:08.663Z,1443520448.663 [ComponentRegistry](DEBUG): SyncComponent "RudderServo" handled in the control thread.
2015-09-29T09:54:08.678Z,1443520448.678 [ThrusterServo] Loaded
2015-09-29T09:54:08.678Z,1443520448.678 [ComponentRegistry](DEBUG): SyncComponent "ThrusterServo" handled in the control thread.
2015-09-29T09:54:08.679Z,1443520448.679 [Module Loader](DEBUG): Loaded Module: Servo (This is the module containing motor controllers)
2015-09-29T09:54:08.680Z,1443520448.680 [Module Loader](DEBUG): Loading Module at Modules/Simulator.so
2015-09-29T09:54:08.878Z,1443520448.878 [InternalSim] Loaded
2015-09-29T09:54:08.879Z,1443520448.879 [ComponentRegistry](DEBUG): SyncComponent "InternalSim" handled in the control thread.
2015-09-29T09:54:08.879Z,1443520448.879 [Module Loader](DEBUG): Loaded Module: Simulator (This is the module containing the Simulator)
2015-09-29T09:54:08.880Z,1443520448.880 [Module Loader](DEBUG): Loading Module at Modules/Trigger.so
2015-09-29T09:54:08.923Z,1443520448.923 [Module Loader](DEBUG): Loaded Module: Trigger (Contains triggers for use in missions)
2015-09-29T09:54:08.931Z,1443520448.931 [ComponentRegistry](DEBUG): SyncComponent "MissionManager" handled in the control thread.
2015-09-29T09:54:08.932Z,1443520448.932 [ComponentRegistry](DEBUG): SyncComponent "Reporter" handled in the control thread.
2015-09-29T09:54:08.938Z,1443520448.938 [ComponentRegistry](DEBUG): Component "NavChartDb" handled in its own thread.
2015-09-29T09:54:08.943Z,1443520448.943 [NavChartDb ThreadHandler](DEBUG): Created PCaller Thread at 408BF4E0
2015-09-29T09:54:08.943Z,1443520448.943 [NavChartDb ThreadHandler](INFO): Protected caller Thread ID is 814
2015-09-29T09:54:08.948Z,1443520448.948 [Supervisor](INFO): Main Thread ID is 761
2015-09-29T09:54:08.948Z,1443520448.948 [Supervisor](DEBUG): Running supervisor.
2015-09-29T09:54:08.949Z,1443520448.949 [CommandLine ThreadHandler](INFO): Handler Thread ID is 815
2015-09-29T09:54:08.955Z,1443520448.955 [controlThread ThreadHandler](INFO): Handler Thread ID is 816
2015-09-29T09:54:08.956Z,1443520448.956 [controlThread](DEBUG): Initializing ControlThread
2015-09-29T09:54:08.956Z,1443520448.956 [VerticalControl](DEBUG): Initialize VerticalControlComponent.
2015-09-29T09:54:08.958Z,1443520448.958 [HorizontalControl](DEBUG): Initialize HorizontalControlComponent.
2015-09-29T09:54:08.959Z,1443520448.959 [SpeedControl](DEBUG): Initialize SpeedControlComponent.
2015-09-29T09:54:08.960Z,1443520448.960 [LoopControl](DEBUG): Initialize LoopControlComponent.
2015-09-29T09:54:08.960Z,1443520448.960 [SBIT](INFO): Initialize SBIT Component.
2015-09-29T09:54:08.961Z,1443520448.961 [SBIT](IMPORTANT): Tethys CM Info: SVN revision:12634
2015-09-29T09:54:08.962Z,1443520448.962 [SBIT](INFO): Kernel Reporting Different Release From Configuration.
Kernel Expected: 2.6.32-45-generic-pae
Kernel Reported: 2.6.27.8
2015-09-29T09:54:08.962Z,1443520448.962 [SBIT](INFO): Kernel Reporting Different Version From Configuration.
Kernel Expected: #102-Ubuntu SMP Wed Jan 2 22:10:16 UTC 2013
Kernel Reported: #641 PREEMPT Mon Sep 28 16:45:10 PDT 2015
2015-09-29T09:54:08.963Z,1443520448.963 [SBIT](INFO): Beginning SBIT in 20.000000 seconds.
2015-09-29T09:54:08.964Z,1443520448.964 [IBIT](INFO): Initialize IBIT Component.
2015-09-29T09:54:08.965Z,1443520448.965 [CBIT](DEBUG): Initialize CBIT Component.
2015-09-29T09:54:08.965Z,1443520448.965 [CBIT](FAULT): LAST RESTART WAS UNINTENTIONAL.
2015-09-29T09:54:08.965Z,1443520448.965 [CBIT](INFO): Last reboot was NOT due to watchdog timer.
2015-09-29T09:54:08.965Z,1443520448.965 [DepthRateCalculator](DEBUG): Initializing DepthRateCalculator.
2015-09-29T09:54:08.966Z,1443520448.966 [PitchRateCalculator](DEBUG): Initializing PitchRateCalculator.
2015-09-29T09:54:08.966Z,1443520448.966 [SpeedCalculator](DEBUG): Initializing SpeedCalculator.
2015-09-29T09:54:08.966Z,1443520448.966 [TempGradientCalculator](DEBUG): Initializing TempGradientCalculator.
2015-09-29T09:54:08.967Z,1443520448.967 [VerticalTemperatureHomogeneityIndexCalculator](DEBUG): (re)initializing
2015-09-29T09:54:08.967Z,1443520448.967 [YawRateCalculator](DEBUG): Initializing YawRateCalculator.
2015-09-29T09:54:08.968Z,1443520448.968 [DeadReckonUsingMultipleVelocitySources](DEBUG): Initializing DeadReckonUsingMultipleVelocitySources component.
2015-09-29T09:54:08.969Z,1443520448.969 [DeadReckonUsingMultipleVelocitySources](INFO): Will consider orientation measurement stale after 120s.
2015-09-29T09:54:08.969Z,1443520448.969 [DeadReckonUsingMultipleVelocitySources](INFO): Will consider velocity measurement stale after 20s.
2015-09-29T09:54:08.969Z,1443520448.969 [DeadReckonUsingSpeedCalculator](DEBUG): Initializing DeadReckonUsingSpeedCalculator component.
2015-09-29T09:54:08.970Z,1443520448.970 [DeadReckonUsingSpeedCalculator](INFO): Will consider orientation measurement stale after 120s.
2015-09-29T09:54:08.970Z,1443520448.970 [DeadReckonUsingSpeedCalculator](INFO): Will consider velocity measurement stale after 20s.
2015-09-29T09:54:08.971Z,1443520448.971 [NavChart](DEBUG): Initialize NavChart Navigation.
2015-09-29T09:54:08.971Z,1443520448.971 [UniversalFixResidualReporter](DEBUG): Initializing UniversalFixResidualReporter component.
2015-09-29T09:54:08.976Z,1443520448.976 [InternalSim](DEBUG):  InternalSim initializing...
2015-09-29T09:54:09.011Z,1443520449.011 [logger ThreadHandler](INFO): Handler Thread ID is 817
2015-09-29T09:54:09.099Z,1443520449.099 [CTD_NeilBrown ThreadHandler](INFO): Handler Thread ID is 818
2015-09-29T09:54:09.108Z,1443520449.108 [WetLabsBB2FL ThreadHandler](INFO): Handler Thread ID is 819
2015-09-29T09:54:09.171Z,1443520449.171 [Radio_Surface ThreadHandler](INFO): Handler Thread ID is 820
2015-09-29T09:54:09.186Z,1443520449.186 [MissionManager](INFO): Loading Mission: Missions/Startup.xml
2015-09-29T09:54:09.198Z,1443520449.198 [NavChartDb ThreadHandler](INFO): Handler Thread ID is 821
2015-09-29T09:54:09.270Z,1443520449.270 [NavChartDb](INFO): Looking for Electronic Nav Chart files in directory: Resources
2015-09-29T09:54:09.272Z,1443520449.272 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US1WC07M.000
2015-09-29T09:54:09.273Z,1443520449.273 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US2WC11M.000
2015-09-29T09:54:09.273Z,1443520449.273 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US3CA52M.000
2015-09-29T09:54:09.273Z,1443520449.273 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US4CA60M.000
2015-09-29T09:54:09.273Z,1443520449.273 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA50M.000
2015-09-29T09:54:09.274Z,1443520449.274 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA61M.000
2015-09-29T09:54:09.274Z,1443520449.274 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA62M.000
2015-09-29T09:54:09.274Z,1443520449.274 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA83M.000
2015-09-29T09:54:09.304Z,1443520449.304 [Startup:A.GoToSurface](DEBUG): Construct GoToSurface.
2015-09-29T09:54:09.332Z,1443520449.332 [MissionManager](DEBUG): 
<?xml version="1.0" encoding="UTF-8"?>
<Mission xmlns="Tethys"
       xmlns:Control="Tethys/Control"
       xmlns:Guidance="Tethys/Guidance" 
       xmlns:Units="Tethys/Units"
       xmlns:Universal="Tethys/Universal"
       xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
       xsi:schemaLocation="Tethys http://okeanids.mbari.org/tethys/Xml/Tethys.xsd
                           Tethys/Control http://okeanids.mbari.org/tethys/Xml/Control.xsd
                           Tethys/Guidance http://okeanids.mbari.org/tethys/Xml/Guidance.xsd
                           Tethys/Units http://okeanids.mbari.org/tethys/Xml/Units.xsd
                           Tethys/Universal http://okeanids.mbari.org/tethys/Xml/Universal.xsd"
       Id="Startup">

    <Guidance:GoToSurface>
        <Progression/>
    </Guidance:GoToSurface>

    <Aggregate Id="StartupSatComms">

        <Sequence/>

        <ReadDatum>
            <Timeout Duration="P1M" />
            <Universal:latitude_fix/>
        </ReadDatum>

        <ReadDatum>
            <Timeout Duration="P1M" />
            <Universal:platform_communications/>
        </ReadDatum>

    </Aggregate>

</Mission>


2015-09-29T09:54:09.333Z,1443520449.333 [MissionManager](INFO): Loading Mission: Missions/Default.xml
2015-09-29T09:54:09.399Z,1443520449.399 [MissionManager](INFO): DefineArg Default.ElapsedSinceDefaultStarted = 0.000000 min
2015-09-29T09:54:09.400Z,1443520449.400 [Default:A.GoToSurface](DEBUG): Construct GoToSurface.
2015-09-29T09:54:09.428Z,1443520449.428 [Default:CheckIn:Read_Iridium:A_Timeout:A.Execute](DEBUG): Construct Execute.
2015-09-29T09:54:09.451Z,1443520449.451 [Default:CheckIn:C.Wait](DEBUG): Construct Wait.
2015-09-29T09:54:09.457Z,1443520449.457 [Default:D.Execute](DEBUG): Construct Execute.
2015-09-29T09:54:09.476Z,1443520449.476 [MissionManager](DEBUG): 
<?xml version="1.0" encoding="UTF-8"?>
<Mission xmlns="Tethys"
xmlns:Guidance="Tethys/Guidance"
xmlns:Units="Tethys/Units"
xmlns:Universal="Tethys/Universal"
xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
xsi:schemaLocation="Tethys http://okeanids.mbari.org/tethys/Xml/Tethys.xsd
Tethys/Guidance http://okeanids.mbari.org/tethys/Xml/Guidance.xsd
Tethys/Units http://okeanids.mbari.org/tethys/Xml/Units.xsd
Tethys/Universal http://okeanids.mbari.org/tethys/Xml/Universal.xsd"
Id="Default">

    <DefineArg Name="ElapsedSinceDefaultStarted"><Units:minute/><Value>0</Value></DefineArg>

    <Guidance:GoToSurface>
        <Progression/>
    </Guidance:GoToSurface>

    <Aggregate Id="CheckIn">

        <Sequence Repeat="288"/>

        <ReadDatum Id="Read_GPS">
            <Sequence/>
            <Timeout Duration="P5M"/>
            <Universal:time_fix/>
        </ReadDatum>

        <ReadDatum Id="Read_Iridium">
            <Sequence/>
            <Timeout Duration="P2H">
                <Guidance:Execute>
                    <Sequence/>
                    <Setting><Guidance:Execute.command/><String>Burn 300</String></Setting>
                </Guidance:Execute>
                <Syslog Severity="Critical">Dropped weight due to communications timeout.</Syslog>
            </Timeout>
            <Universal:platform_communications/>
        </ReadDatum>

        <Guidance:Wait>
            <Sequence/>
            <Setting><Guidance:Wait.duration/><Units:minute/><Value>5</Value></Setting>
        </Guidance:Wait>

        <Assign><Sequence/><Arg Name="ElapsedSinceDefaultStarted"/><Elapsed><Universal:mission_started/></Elapsed></Assign>

        <Syslog Severity="Important">Default mission has been running for <Arg Name="ElapsedSinceDefaultStarted"/><Units:minute/></Syslog>

    </Aggregate>

    <Syslog Severity="Important">Restarting logs and Default mission.</Syslog>

    <Guidance:Execute>
        <Sequence/>
        <Setting><Guidance:Execute.command/><String>restart logs</String></Setting>
    </Guidance:Execute>

</Mission>


2015-09-29T09:54:09.482Z,1443520449.482 [controlThread](DEBUG): Component order: CycleStarter,InternalSim,ISUS,PAR_Licor,AHRS_sp3003D,DataOverHttps,Depth_Keller,DropWeight,DVL_micro,NAL9602,Onboard,DAT,SCPI,PAR_Licor,Depth_Keller,DepthRateCalculator,PitchRateCalculator,SpeedCalculator,TempGradientCalculator,VerticalTemperatureHomogeneityIndexCalculator,YawRateCalculator,StratificationFrontDetector,DeadReckonUsingMultipleVelocitySources,DeadReckonUsingSpeedCalculator,NavChart,UniversalFixResidualReporter,MissionManager,VerticalControl,HorizontalControl,SpeedControl,LoopControl,BuoyancyServo,ElevatorServo,MassServo,RudderServo,ThrusterServo,SBIT,IBIT,CBIT,Reporter,LogSplitter,
2015-09-29T09:54:09.694Z,1443520449.694 [DVL_micro](INFO): Initializing
2015-09-29T09:54:09.856Z,1443520449.856 [DeadReckonUsingMultipleVelocitySources](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T09:54:09.880Z,1443520449.880 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T09:54:09.983Z,1443520449.983 [BuoyancyServo](DEBUG): Initializing BuoyancyServo.
2015-09-29T09:54:09.995Z,1443520449.995 [ElevatorServo](DEBUG): Initializing ElevatorServo.
2015-09-29T09:54:10.007Z,1443520450.007 [MassServo](DEBUG): Initializing MassServo.
2015-09-29T09:54:10.034Z,1443520450.034 [RudderServo](DEBUG): Initializing RudderServo.
2015-09-29T09:54:10.058Z,1443520450.058 [ThrusterServo](DEBUG): Initializing ThrusterServo.
2015-09-29T09:54:10.305Z,1443520450.305 [DeadReckonUsingMultipleVelocitySources](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T09:54:10.307Z,1443520450.307 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T09:54:19.429Z,1443520459.429 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T09:54:19.759Z,1443520459.759 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T09:54:19.894Z,1443520459.894 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T09:54:20.294Z,1443520460.294 [DataOverHttps](INFO): setting available, lastComms_.elapsed()=0.003000
2015-09-29T09:54:20.297Z,1443520460.297 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T09:54:20.692Z,1443520460.692 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T09:54:21.092Z,1443520461.092 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T09:54:21.493Z,1443520461.493 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T09:54:21.892Z,1443520461.892 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T09:54:22.291Z,1443520462.291 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T09:54:22.692Z,1443520462.692 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T09:54:23.091Z,1443520463.091 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T09:54:23.492Z,1443520463.492 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T09:54:23.893Z,1443520463.893 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T09:54:24.291Z,1443520464.291 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T09:54:24.691Z,1443520464.691 [NAL9602](INFO): No messages in MT queue
2015-09-29T09:54:24.691Z,1443520464.691 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T09:54:25.099Z,1443520465.099 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T09:54:25.495Z,1443520465.495 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T09:54:25.891Z,1443520465.891 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T09:54:26.292Z,1443520466.292 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T09:54:26.691Z,1443520466.691 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T09:54:27.091Z,1443520467.091 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T09:54:27.492Z,1443520467.492 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T09:54:27.891Z,1443520467.891 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T09:54:28.294Z,1443520468.294 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T09:54:28.691Z,1443520468.691 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T09:54:29.091Z,1443520469.091 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T09:54:29.491Z,1443520469.491 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T09:54:29.505Z,1443520469.505 [SBIT](IMPORTANT): Beginning Startup BIT
2015-09-29T09:54:29.891Z,1443520469.891 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T09:54:30.294Z,1443520470.294 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T09:54:30.698Z,1443520470.698 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T09:54:31.093Z,1443520471.093 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T09:54:31.498Z,1443520471.498 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T09:54:31.897Z,1443520471.897 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T09:54:32.297Z,1443520472.297 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T09:54:32.697Z,1443520472.697 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T09:54:33.094Z,1443520473.094 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T09:54:33.497Z,1443520473.497 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T09:54:33.894Z,1443520473.894 [D