2015-09-29T09:46:07.977Z,1443519967.977 [Supervisor](DEBUG): Initializing supervisor.
2015-09-29T09:46:07.981Z,1443519967.981 [SyncHandler](DEBUG): Created PCaller Thread at 4034C4E0
2015-09-29T09:46:07.981Z,1443519967.981 [SyncHandler](INFO): Protected caller Thread ID is 761
2015-09-29T09:46:07.982Z,1443519967.982 [ComponentRegistry](DEBUG): Component "controlThread" handled in its own thread.
2015-09-29T09:46:07.986Z,1443519967.986 [controlThread ThreadHandler](DEBUG): Created PCaller Thread at 4037C4E0
2015-09-29T09:46:07.987Z,1443519967.987 [controlThread ThreadHandler](INFO): Protected caller Thread ID is 762
2015-09-29T09:46:07.990Z,1443519967.990 [ComponentRegistry](DEBUG): SyncComponent "CycleStarter" handled in the control thread.
2015-09-29T09:46:08.003Z,1443519968.003 [ComponentRegistry](DEBUG): Component "CommandLine" handled in its own thread.
2015-09-29T09:46:08.006Z,1443519968.006 [CommandLine ThreadHandler](DEBUG): Created PCaller Thread at 403AC4E0
2015-09-29T09:46:08.007Z,1443519968.007 [CommandLine ThreadHandler](INFO): Protected caller Thread ID is 763
2015-09-29T09:46:08.008Z,1443519968.008 [ComponentRegistry](DEBUG): Component "logger" handled in its own thread.
2015-09-29T09:46:08.010Z,1443519968.010 [logger ThreadHandler](DEBUG): Created PCaller Thread at 403DC4E0
2015-09-29T09:46:08.011Z,1443519968.011 [logger ThreadHandler](INFO): Protected caller Thread ID is 764
2015-09-29T09:46:08.013Z,1443519968.013 [ComponentRegistry](DEBUG): SyncComponent "LogSplitter" handled in the control thread.
2015-09-29T09:46:08.013Z,1443519968.013 [Supervisor](INFO): Looking for Config files in directory: Config/
2015-09-29T09:46:08.017Z,1443519968.017 [Supervisor](INFO): Opening Config file at: Config/Control.cfg
2015-09-29T09:46:08.432Z,1443519968.432 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Control
2015-09-29T09:46:08.434Z,1443519968.434 [Supervisor](INFO): Opening Config file at: Config/BIT.cfg
2015-09-29T09:46:08.635Z,1443519968.635 [ComponentRegistry](DEBUG): Loaded Config Component "Config/BIT
2015-09-29T09:46:08.637Z,1443519968.637 [Supervisor](INFO): Opening Config file at: Config/Derivation.cfg
2015-09-29T09:46:08.783Z,1443519968.783 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Derivation
2015-09-29T09:46:08.784Z,1443519968.784 [Supervisor](INFO): Opening Config file at: Config/Estimation.cfg
2015-09-29T09:46:08.938Z,1443519968.938 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Estimation
2015-09-29T09:46:08.939Z,1443519968.939 [Supervisor](INFO): Opening Config file at: Config/Guidance.cfg
2015-09-29T09:46:09.034Z,1443519969.034 [Supervisor](INFO): Opening Config file at: Config/Navigation.cfg
2015-09-29T09:46:09.263Z,1443519969.263 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Navigation
2015-09-29T09:46:09.264Z,1443519969.264 [Supervisor](INFO): Opening Config file at: Config/Sample.cfg
2015-09-29T09:46:09.363Z,1443519969.363 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Sample
2015-09-29T09:46:09.364Z,1443519969.364 [Supervisor](INFO): Opening Config file at: Config/Science.cfg
2015-09-29T09:46:09.687Z,1443519969.687 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Science
2015-09-29T09:46:09.688Z,1443519969.688 [Supervisor](INFO): Opening Config file at: Config/Sensor.cfg
2015-09-29T09:46:10.107Z,1443519970.107 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Sensor
2015-09-29T09:46:10.108Z,1443519970.108 [Supervisor](INFO): Opening Config file at: Config/Servo.cfg
2015-09-29T09:46:10.480Z,1443519970.480 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Servo
2015-09-29T09:46:10.482Z,1443519970.482 [Supervisor](INFO): Opening Config file at: Config/Simulator.cfg
2015-09-29T09:46:11.100Z,1443519971.100 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Simulator
2015-09-29T09:46:11.101Z,1443519971.101 [Supervisor](INFO): Opening Config file at: Config/logger.cfg
2015-09-29T09:46:11.346Z,1443519971.346 [ComponentRegistry](DEBUG): Loaded Config Component "Config/logger
2015-09-29T09:46:11.347Z,1443519971.347 [Supervisor](INFO): Opening Config file at: Config/secure.cfg
2015-09-29T09:46:11.465Z,1443519971.465 [ComponentRegistry](DEBUG): Loaded Config Component "Config/secure
2015-09-29T09:46:11.466Z,1443519971.466 [Supervisor](INFO): Opening Config file at: Config/vehicle.cfg
2015-09-29T09:46:12.016Z,1443519972.016 [ComponentRegistry](DEBUG): Loaded Config Component "Config/vehicle
2015-09-29T09:46:12.017Z,1443519972.017 [Supervisor](INFO): Opening Config file at: Config/workSite.cfg
2015-09-29T09:46:12.142Z,1443519972.142 [ComponentRegistry](DEBUG): Loaded Config Component "Config/workSite
2015-09-29T09:46:12.144Z,1443519972.144 [Supervisor](INFO): Looking for Config files in directory: Config/(none)/
2015-09-29T09:46:12.144Z,1443519972.144 [Supervisor](FAULT): Ignoring configuration overrides from Data/persisted.cfg
2015-09-29T09:46:12.149Z,1443519972.149 [Module Loader](DEBUG): Loading Module at Modules/Control.so
2015-09-29T09:46:12.223Z,1443519972.223 [VerticalControl](DEBUG): Construct VerticalControl.
2015-09-29T09:46:12.361Z,1443519972.361 [VerticalControl] Loaded
2015-09-29T09:46:12.361Z,1443519972.361 [ComponentRegistry](DEBUG): SyncComponent "VerticalControl" handled in the control thread.
2015-09-29T09:46:12.362Z,1443519972.362 [HorizontalControl](DEBUG): Construct HorizontalControl.
2015-09-29T09:46:12.445Z,1443519972.445 [HorizontalControl] Loaded
2015-09-29T09:46:12.445Z,1443519972.445 [ComponentRegistry](DEBUG): SyncComponent "HorizontalControl" handled in the control thread.
2015-09-29T09:46:12.446Z,1443519972.446 [SpeedControl](DEBUG): Construct SpeedControl.
2015-09-29T09:46:12.456Z,1443519972.456 [SpeedControl] Loaded
2015-09-29T09:46:12.456Z,1443519972.456 [ComponentRegistry](DEBUG): SyncComponent "SpeedControl" handled in the control thread.
2015-09-29T09:46:12.457Z,1443519972.457 [LoopControl](DEBUG): Construct LoopControl.
2015-09-29T09:46:12.458Z,1443519972.458 [LoopControl] Loaded
2015-09-29T09:46:12.458Z,1443519972.458 [ComponentRegistry](DEBUG): SyncComponent "LoopControl" handled in the control thread.
2015-09-29T09:46:12.458Z,1443519972.458 [Module Loader](DEBUG): Loaded Module: Control (Contains the Control components, such as Depth, Heading, and Speed Control)
2015-09-29T09:46:12.459Z,1443519972.459 [Module Loader](DEBUG): Loading Module at Modules/BIT.so
2015-09-29T09:46:12.620Z,1443519972.620 [SBIT](DEBUG): Construct Startup Built In Test.
2015-09-29T09:46:12.633Z,1443519972.633 [SBIT] Loaded
2015-09-29T09:46:12.633Z,1443519972.633 [ComponentRegistry](DEBUG): SyncComponent "SBIT" handled in the control thread.
2015-09-29T09:46:12.634Z,1443519972.634 [IBIT](DEBUG): Construct Initiated Built In Test.
2015-09-29T09:46:12.669Z,1443519972.669 [IBIT] Loaded
2015-09-29T09:46:12.669Z,1443519972.669 [ComponentRegistry](DEBUG): SyncComponent "IBIT" handled in the control thread.
2015-09-29T09:46:12.671Z,1443519972.671 [CBIT](DEBUG): Construct Continuous Built In Test.
2015-09-29T09:46:12.829Z,1443519972.829 [CBIT] Loaded
2015-09-29T09:46:12.829Z,1443519972.829 [ComponentRegistry](DEBUG): SyncComponent "CBIT" handled in the control thread.
2015-09-29T09:46:12.830Z,1443519972.830 [Module Loader](DEBUG): Loaded Module: BIT (Contains the BuiltInTest components, such as C Built In Test)
2015-09-29T09:46:12.831Z,1443519972.831 [Module Loader](DEBUG): Loading Module at Modules/Derivation.so
2015-09-29T09:46:12.872Z,1443519972.872 [DepthRateCalculator] Loaded
2015-09-29T09:46:12.872Z,1443519972.872 [ComponentRegistry](DEBUG): SyncComponent "DepthRateCalculator" handled in the control thread.
2015-09-29T09:46:12.878Z,1443519972.878 [PitchRateCalculator] Loaded
2015-09-29T09:46:12.882Z,1443519972.882 [ComponentRegistry](DEBUG): SyncComponent "PitchRateCalculator" handled in the control thread.
2015-09-29T09:46:12.894Z,1443519972.894 [SpeedCalculator] Loaded
2015-09-29T09:46:12.894Z,1443519972.894 [ComponentRegistry](DEBUG): SyncComponent "SpeedCalculator" handled in the control thread.
2015-09-29T09:46:12.912Z,1443519972.912 [TempGradientCalculator] Loaded
2015-09-29T09:46:12.912Z,1443519972.912 [ComponentRegistry](DEBUG): SyncComponent "TempGradientCalculator" handled in the control thread.
2015-09-29T09:46:12.934Z,1443519972.934 [VerticalTemperatureHomogeneityIndexCalculator] Loaded
2015-09-29T09:46:12.934Z,1443519972.934 [ComponentRegistry](DEBUG): SyncComponent "VerticalTemperatureHomogeneityIndexCalculator" handled in the control thread.
2015-09-29T09:46:12.940Z,1443519972.940 [YawRateCalculator] Loaded
2015-09-29T09:46:12.940Z,1443519972.940 [ComponentRegistry](DEBUG): SyncComponent "YawRateCalculator" handled in the control thread.
2015-09-29T09:46:12.940Z,1443519972.940 [Module Loader](DEBUG): Loaded Module: Derivation (Contains the base derivation components)
2015-09-29T09:46:12.941Z,1443519972.941 [Module Loader](DEBUG): Loading Module at Modules/Estimation.so
2015-09-29T09:46:13.066Z,1443519973.066 [StratificationFrontDetector](INFO): threshold set to: 0.399988 degC
2015-09-29T09:46:13.066Z,1443519973.066 [StratificationFrontDetector](DEBUG): (re)initializing
2015-09-29T09:46:13.066Z,1443519973.066 [StratificationFrontDetector] Loaded
2015-09-29T09:46:13.066Z,1443519973.066 [ComponentRegistry](DEBUG): SyncComponent "StratificationFrontDetector" handled in the control thread.
2015-09-29T09:46:13.067Z,1443519973.067 [Module Loader](DEBUG): Loaded Module: Estimation (Contains the base estimation components)
2015-09-29T09:46:13.068Z,1443519973.068 [Module Loader](DEBUG): Loading Module at Modules/Guidance.so
2015-09-29T09:46:13.364Z,1443519973.364 [Module Loader](DEBUG): Loaded Module: Guidance (Contains behaviors and commands)
2015-09-29T09:46:13.364Z,1443519973.364 [Module Loader](DEBUG): Loading Module at Modules/Navigation.so
2015-09-29T09:46:13.499Z,1443519973.499 [DeadReckonUsingMultipleVelocitySources] Loaded
2015-09-29T09:46:13.499Z,1443519973.499 [ComponentRegistry](DEBUG): SyncComponent "DeadReckonUsingMultipleVelocitySources" handled in the control thread.
2015-09-29T09:46:13.561Z,1443519973.561 [DeadReckonUsingSpeedCalculator] Loaded
2015-09-29T09:46:13.561Z,1443519973.561 [ComponentRegistry](DEBUG): SyncComponent "DeadReckonUsingSpeedCalculator" handled in the control thread.
2015-09-29T09:46:13.583Z,1443519973.583 [NavChart] Loaded
2015-09-29T09:46:13.584Z,1443519973.584 [ComponentRegistry](DEBUG): SyncComponent "NavChart" handled in the control thread.
2015-09-29T09:46:13.589Z,1443519973.589 [UniversalFixResidualReporter] Loaded
2015-09-29T09:46:13.589Z,1443519973.589 [ComponentRegistry](DEBUG): SyncComponent "UniversalFixResidualReporter" handled in the control thread.
2015-09-29T09:46:13.590Z,1443519973.590 [Module Loader](DEBUG): Loaded Module: Navigation (Contains the base navigation components)
2015-09-29T09:46:13.590Z,1443519973.590 [Module Loader](DEBUG): Loading Module at Modules/Sample.so
2015-09-29T09:46:13.599Z,1443519973.599 [Module Loader](DEBUG): Loaded Module: Sample (This is a Sample Module of Sample Components)
2015-09-29T09:46:13.600Z,1443519973.600 [Module Loader](DEBUG): Loading Module at Modules/Science.so
2015-09-29T09:46:13.905Z,1443519973.905 [CTD_NeilBrown] Loaded
2015-09-29T09:46:13.905Z,1443519973.905 [ComponentRegistry](DEBUG): Component "CTD_NeilBrown" handled in its own thread.
2015-09-29T09:46:13.910Z,1443519973.910 [CTD_NeilBrown ThreadHandler](DEBUG): Created PCaller Thread at 4059D4E0
2015-09-29T09:46:13.911Z,1443519973.911 [CTD_NeilBrown ThreadHandler](INFO): Protected caller Thread ID is 810
2015-09-29T09:46:13.924Z,1443519973.924 [ISUS] Loaded
2015-09-29T09:46:13.924Z,1443519973.924 [ComponentRegistry](DEBUG): SyncComponent "ISUS" handled in the control thread.
2015-09-29T09:46:13.943Z,1443519973.943 [PAR_Licor] Loaded
2015-09-29T09:46:13.943Z,1443519973.943 [ComponentRegistry](DEBUG): SyncComponent "PAR_Licor" handled in the control thread.
2015-09-29T09:46:14.000Z,1443519974.000 [WetLabsBB2FL] Loaded
2015-09-29T09:46:14.000Z,1443519974.000 [ComponentRegistry](DEBUG): Component "WetLabsBB2FL" handled in its own thread.
2015-09-29T09:46:14.002Z,1443519974.002 [WetLabsBB2FL ThreadHandler](DEBUG): Created PCaller Thread at 405CD4E0
2015-09-29T09:46:14.003Z,1443519974.003 [WetLabsBB2FL ThreadHandler](INFO): Protected caller Thread ID is 811
2015-09-29T09:46:14.003Z,1443519974.003 [Module Loader](DEBUG): Loaded Module: Science (Contains the science components)
2015-09-29T09:46:14.004Z,1443519974.004 [Module Loader](DEBUG): Loading Module at Modules/Sensor.so
2015-09-29T09:46:14.731Z,1443519974.731 [AHRS_sp3003D] Loaded
2015-09-29T09:46:14.732Z,1443519974.732 [ComponentRegistry](DEBUG): SyncComponent "AHRS_sp3003D" handled in the control thread.
2015-09-29T09:46:14.919Z,1443519974.919 [DataOverHttps] Loaded
2015-09-29T09:46:14.919Z,1443519974.919 [ComponentRegistry](DEBUG): SyncComponent "DataOverHttps" handled in the control thread.
2015-09-29T09:46:14.933Z,1443519974.933 [Depth_Keller] Loaded
2015-09-29T09:46:14.933Z,1443519974.933 [ComponentRegistry](DEBUG): SyncComponent "Depth_Keller" handled in the control thread.
2015-09-29T09:46:14.938Z,1443519974.938 [DropWeight] Loaded
2015-09-29T09:46:14.939Z,1443519974.939 [ComponentRegistry](DEBUG): SyncComponent "DropWeight" handled in the control thread.
2015-09-29T09:46:15.097Z,1443519975.097 [DVL_micro] Loaded
2015-09-29T09:46:15.097Z,1443519975.097 [ComponentRegistry](DEBUG): SyncComponent "DVL_micro" handled in the control thread.
2015-09-29T09:46:15.207Z,1443519975.207 [NAL9602] Loaded
2015-09-29T09:46:15.208Z,1443519975.208 [ComponentRegistry](DEBUG): SyncComponent "NAL9602" handled in the control thread.
2015-09-29T09:46:15.256Z,1443519975.256 [Onboard] Loaded
2015-09-29T09:46:15.256Z,1443519975.256 [ComponentRegistry](DEBUG): SyncComponent "Onboard" handled in the control thread.
2015-09-29T09:46:15.268Z,1443519975.268 [Radio_Surface] Loaded
2015-09-29T09:46:15.268Z,1443519975.268 [ComponentRegistry](DEBUG): Component "Radio_Surface" handled in its own thread.
2015-09-29T09:46:15.270Z,1443519975.270 [Radio_Surface ThreadHandler](DEBUG): Created PCaller Thread at 408114E0
2015-09-29T09:46:15.271Z,1443519975.271 [Radio_Surface ThreadHandler](INFO): Protected caller Thread ID is 812
2015-09-29T09:46:15.433Z,1443519975.433 [DAT] Loaded
2015-09-29T09:46:15.433Z,1443519975.433 [ComponentRegistry](DEBUG): SyncComponent "DAT" handled in the control thread.
2015-09-29T09:46:15.440Z,1443519975.440 [SCPI] Loaded
2015-09-29T09:46:15.440Z,1443519975.440 [ComponentRegistry](DEBUG): SyncComponent "SCPI" handled in the control thread.
2015-09-29T09:46:15.441Z,1443519975.441 [Module Loader](DEBUG): Loaded Module: Sensor (Contains the sensor components)
2015-09-29T09:46:15.442Z,1443519975.442 [Module Loader](DEBUG): Loading Module at Modules/Servo.so
2015-09-29T09:46:15.579Z,1443519975.579 [BuoyancyServo] Loaded
2015-09-29T09:46:15.580Z,1443519975.580 [ComponentRegistry](DEBUG): SyncComponent "BuoyancyServo" handled in the control thread.
2015-09-29T09:46:15.593Z,1443519975.593 [ElevatorServo] Loaded
2015-09-29T09:46:15.593Z,1443519975.593 [ComponentRegistry](DEBUG): SyncComponent "ElevatorServo" handled in the control thread.
2015-09-29T09:46:15.605Z,1443519975.605 [MassServo] Loaded
2015-09-29T09:46:15.605Z,1443519975.605 [ComponentRegistry](DEBUG): SyncComponent "MassServo" handled in the control thread.
2015-09-29T09:46:15.622Z,1443519975.622 [RudderServo] Loaded
2015-09-29T09:46:15.622Z,1443519975.622 [ComponentRegistry](DEBUG): SyncComponent "RudderServo" handled in the control thread.
2015-09-29T09:46:15.633Z,1443519975.633 [ThrusterServo] Loaded
2015-09-29T09:46:15.634Z,1443519975.634 [ComponentRegistry](DEBUG): SyncComponent "ThrusterServo" handled in the control thread.
2015-09-29T09:46:15.634Z,1443519975.634 [Module Loader](DEBUG): Loaded Module: Servo (This is the module containing motor controllers)
2015-09-29T09:46:15.635Z,1443519975.635 [Module Loader](DEBUG): Loading Module at Modules/Simulator.so
2015-09-29T09:46:15.838Z,1443519975.838 [InternalSim] Loaded
2015-09-29T09:46:15.838Z,1443519975.838 [ComponentRegistry](DEBUG): SyncComponent "InternalSim" handled in the control thread.
2015-09-29T09:46:15.839Z,1443519975.839 [Module Loader](DEBUG): Loaded Module: Simulator (This is the module containing the Simulator)
2015-09-29T09:46:15.839Z,1443519975.839 [Module Loader](DEBUG): Loading Module at Modules/Trigger.so
2015-09-29T09:46:15.883Z,1443519975.883 [Module Loader](DEBUG): Loaded Module: Trigger (Contains triggers for use in missions)
2015-09-29T09:46:15.888Z,1443519975.888 [ComponentRegistry](DEBUG): SyncComponent "MissionManager" handled in the control thread.
2015-09-29T09:46:15.888Z,1443519975.888 [ComponentRegistry](DEBUG): SyncComponent "Reporter" handled in the control thread.
2015-09-29T09:46:15.895Z,1443519975.895 [ComponentRegistry](DEBUG): Component "NavChartDb" handled in its own thread.
2015-09-29T09:46:15.898Z,1443519975.898 [NavChartDb ThreadHandler](DEBUG): Created PCaller Thread at 408BF4E0
2015-09-29T09:46:15.899Z,1443519975.899 [NavChartDb ThreadHandler](INFO): Protected caller Thread ID is 813
2015-09-29T09:46:15.904Z,1443519975.904 [Supervisor](INFO): Main Thread ID is 760
2015-09-29T09:46:15.904Z,1443519975.904 [Supervisor](DEBUG): Running supervisor.
2015-09-29T09:46:15.905Z,1443519975.905 [CommandLine ThreadHandler](INFO): Handler Thread ID is 814
2015-09-29T09:46:15.911Z,1443519975.911 [controlThread ThreadHandler](INFO): Handler Thread ID is 815
2015-09-29T09:46:15.911Z,1443519975.911 [controlThread](DEBUG): Initializing ControlThread
2015-09-29T09:46:15.912Z,1443519975.912 [VerticalControl](DEBUG): Initialize VerticalControlComponent.
2015-09-29T09:46:15.914Z,1443519975.914 [HorizontalControl](DEBUG): Initialize HorizontalControlComponent.
2015-09-29T09:46:15.915Z,1443519975.915 [SpeedControl](DEBUG): Initialize SpeedControlComponent.
2015-09-29T09:46:15.915Z,1443519975.915 [LoopControl](DEBUG): Initialize LoopControlComponent.
2015-09-29T09:46:15.916Z,1443519975.916 [SBIT](INFO): Initialize SBIT Component.
2015-09-29T09:46:15.916Z,1443519975.916 [SBIT](IMPORTANT): Tethys CM Info: SVN revision:12634
2015-09-29T09:46:15.918Z,1443519975.918 [SBIT](INFO): Kernel Reporting Different Release From Configuration.
Kernel Expected: 2.6.32-45-generic-pae
Kernel Reported: 2.6.27.8
2015-09-29T09:46:15.918Z,1443519975.918 [SBIT](INFO): Kernel Reporting Different Version From Configuration.
Kernel Expected: #102-Ubuntu SMP Wed Jan 2 22:10:16 UTC 2013
Kernel Reported: #641 PREEMPT Mon Sep 28 16:45:10 PDT 2015
2015-09-29T09:46:15.919Z,1443519975.919 [SBIT](INFO): Beginning SBIT in 20.000000 seconds.
2015-09-29T09:46:15.919Z,1443519975.919 [IBIT](INFO): Initialize IBIT Component.
2015-09-29T09:46:15.920Z,1443519975.920 [CBIT](DEBUG): Initialize CBIT Component.
2015-09-29T09:46:15.920Z,1443519975.920 [CBIT](FAULT): LAST RESTART WAS UNINTENTIONAL.
2015-09-29T09:46:15.921Z,1443519975.921 [CBIT](INFO): Last reboot was NOT due to watchdog timer.
2015-09-29T09:46:15.921Z,1443519975.921 [DepthRateCalculator](DEBUG): Initializing DepthRateCalculator.
2015-09-29T09:46:15.921Z,1443519975.921 [PitchRateCalculator](DEBUG): Initializing PitchRateCalculator.
2015-09-29T09:46:15.922Z,1443519975.922 [SpeedCalculator](DEBUG): Initializing SpeedCalculator.
2015-09-29T09:46:15.922Z,1443519975.922 [TempGradientCalculator](DEBUG): Initializing TempGradientCalculator.
2015-09-29T09:46:15.922Z,1443519975.922 [VerticalTemperatureHomogeneityIndexCalculator](DEBUG): (re)initializing
2015-09-29T09:46:15.923Z,1443519975.923 [YawRateCalculator](DEBUG): Initializing YawRateCalculator.
2015-09-29T09:46:15.924Z,1443519975.924 [DeadReckonUsingMultipleVelocitySources](DEBUG): Initializing DeadReckonUsingMultipleVelocitySources component.
2015-09-29T09:46:15.924Z,1443519975.924 [DeadReckonUsingMultipleVelocitySources](INFO): Will consider orientation measurement stale after 120s.
2015-09-29T09:46:15.925Z,1443519975.925 [DeadReckonUsingMultipleVelocitySources](INFO): Will consider velocity measurement stale after 20s.
2015-09-29T09:46:15.925Z,1443519975.925 [DeadReckonUsingSpeedCalculator](DEBUG): Initializing DeadReckonUsingSpeedCalculator component.
2015-09-29T09:46:15.926Z,1443519975.926 [DeadReckonUsingSpeedCalculator](INFO): Will consider orientation measurement stale after 120s.
2015-09-29T09:46:15.926Z,1443519975.926 [DeadReckonUsingSpeedCalculator](INFO): Will consider velocity measurement stale after 20s.
2015-09-29T09:46:15.926Z,1443519975.926 [NavChart](DEBUG): Initialize NavChart Navigation.
2015-09-29T09:46:15.927Z,1443519975.927 [UniversalFixResidualReporter](DEBUG): Initializing UniversalFixResidualReporter component.
2015-09-29T09:46:15.932Z,1443519975.932 [InternalSim](DEBUG):  InternalSim initializing...
2015-09-29T09:46:15.963Z,1443519975.963 [logger ThreadHandler](INFO): Handler Thread ID is 816
2015-09-29T09:46:16.067Z,1443519976.067 [CTD_NeilBrown ThreadHandler](INFO): Handler Thread ID is 817
2015-09-29T09:46:16.068Z,1443519976.068 [WetLabsBB2FL ThreadHandler](INFO): Handler Thread ID is 818
2015-09-29T09:46:16.079Z,1443519976.079 [Radio_Surface ThreadHandler](INFO): Handler Thread ID is 819
2015-09-29T09:46:16.126Z,1443519976.126 [NavChartDb ThreadHandler](INFO): Handler Thread ID is 820
2015-09-29T09:46:16.133Z,1443519976.133 [NavChartDb](INFO): Looking for Electronic Nav Chart files in directory: Resources
2015-09-29T09:46:16.135Z,1443519976.135 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US1WC07M.000
2015-09-29T09:46:16.135Z,1443519976.135 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US2WC11M.000
2015-09-29T09:46:16.136Z,1443519976.136 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US3CA52M.000
2015-09-29T09:46:16.136Z,1443519976.136 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US4CA60M.000
2015-09-29T09:46:16.136Z,1443519976.136 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA50M.000
2015-09-29T09:46:16.136Z,1443519976.136 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA61M.000
2015-09-29T09:46:16.137Z,1443519976.137 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA62M.000
2015-09-29T09:46:16.137Z,1443519976.137 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA83M.000
2015-09-29T09:46:16.155Z,1443519976.155 [MissionManager](INFO): Loading Mission: Missions/Startup.xml
2015-09-29T09:46:16.232Z,1443519976.232 [Startup:A.GoToSurface](DEBUG): Construct GoToSurface.
2015-09-29T09:46:16.242Z,1443519976.242 [MissionManager](DEBUG): 
<?xml version="1.0" encoding="UTF-8"?>
<Mission xmlns="Tethys"
       xmlns:Control="Tethys/Control"
       xmlns:Guidance="Tethys/Guidance" 
       xmlns:Units="Tethys/Units"
       xmlns:Universal="Tethys/Universal"
       xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
       xsi:schemaLocation="Tethys http://okeanids.mbari.org/tethys/Xml/Tethys.xsd
                           Tethys/Control http://okeanids.mbari.org/tethys/Xml/Control.xsd
                           Tethys/Guidance http://okeanids.mbari.org/tethys/Xml/Guidance.xsd
                           Tethys/Units http://okeanids.mbari.org/tethys/Xml/Units.xsd
                           Tethys/Universal http://okeanids.mbari.org/tethys/Xml/Universal.xsd"
       Id="Startup">

    <Guidance:GoToSurface>
        <Progression/>
    </Guidance:GoToSurface>

    <Aggregate Id="StartupSatComms">

        <Sequence/>

        <ReadDatum>
            <Timeout Duration="P1M" />
            <Universal:latitude_fix/>
        </ReadDatum>

        <ReadDatum>
            <Timeout Duration="P1M" />
            <Universal:platform_communications/>
        </ReadDatum>

    </Aggregate>

</Mission>


2015-09-29T09:46:16.267Z,1443519976.267 [MissionManager](INFO): Loading Mission: Missions/Default.xml
2015-09-29T09:46:16.322Z,1443519976.322 [MissionManager](INFO): DefineArg Default.ElapsedSinceDefaultStarted = 0.000000 min
2015-09-29T09:46:16.347Z,1443519976.347 [Default:A.GoToSurface](DEBUG): Construct GoToSurface.
2015-09-29T09:46:16.373Z,1443519976.373 [Default:CheckIn:Read_Iridium:A_Timeout:A.Execute](DEBUG): Construct Execute.
2015-09-29T09:46:16.376Z,1443519976.376 [Default:CheckIn:C.Wait](DEBUG): Construct Wait.
2015-09-29T09:46:16.398Z,1443519976.398 [Default:D.Execute](DEBUG): Construct Execute.
2015-09-29T09:46:16.401Z,1443519976.401 [MissionManager](DEBUG): 
<?xml version="1.0" encoding="UTF-8"?>
<Mission xmlns="Tethys"
xmlns:Guidance="Tethys/Guidance"
xmlns:Units="Tethys/Units"
xmlns:Universal="Tethys/Universal"
xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
xsi:schemaLocation="Tethys http://okeanids.mbari.org/tethys/Xml/Tethys.xsd
Tethys/Guidance http://okeanids.mbari.org/tethys/Xml/Guidance.xsd
Tethys/Units http://okeanids.mbari.org/tethys/Xml/Units.xsd
Tethys/Universal http://okeanids.mbari.org/tethys/Xml/Universal.xsd"
Id="Default">

    <DefineArg Name="ElapsedSinceDefaultStarted"><Units:minute/><Value>0</Value></DefineArg>

    <Guidance:GoToSurface>
        <Progression/>
    </Guidance:GoToSurface>

    <Aggregate Id="CheckIn">

        <Sequence Repeat="288"/>

        <ReadDatum Id="Read_GPS">
            <Sequence/>
            <Timeout Duration="P5M"/>
            <Universal:time_fix/>
        </ReadDatum>

        <ReadDatum Id="Read_Iridium">
            <Sequence/>
            <Timeout Duration="P2H">
                <Guidance:Execute>
                    <Sequence/>
                    <Setting><Guidance:Execute.command/><String>Burn 300</String></Setting>
                </Guidance:Execute>
                <Syslog Severity="Critical">Dropped weight due to communications timeout.</Syslog>
            </Timeout>
            <Universal:platform_communications/>
        </ReadDatum>

        <Guidance:Wait>
            <Sequence/>
            <Setting><Guidance:Wait.duration/><Units:minute/><Value>5</Value></Setting>
        </Guidance:Wait>

        <Assign><Sequence/><Arg Name="ElapsedSinceDefaultStarted"/><Elapsed><Universal:mission_started/></Elapsed></Assign>

        <Syslog Severity="Important">Default mission has been running for <Arg Name="ElapsedSinceDefaultStarted"/><Units:minute/></Syslog>

    </Aggregate>

    <Syslog Severity="Important">Restarting logs and Default mission.</Syslog>

    <Guidance:Execute>
        <Sequence/>
        <Setting><Guidance:Execute.command/><String>restart logs</String></Setting>
    </Guidance:Execute>

</Mission>


2015-09-29T09:46:16.412Z,1443519976.412 [controlThread](DEBUG): Component order: CycleStarter,InternalSim,ISUS,PAR_Licor,AHRS_sp3003D,DataOverHttps,Depth_Keller,DropWeight,DVL_micro,NAL9602,Onboard,DAT,SCPI,PAR_Licor,Depth_Keller,DepthRateCalculator,PitchRateCalculator,SpeedCalculator,TempGradientCalculator,VerticalTemperatureHomogeneityIndexCalculator,YawRateCalculator,StratificationFrontDetector,DeadReckonUsingMultipleVelocitySources,DeadReckonUsingSpeedCalculator,NavChart,UniversalFixResidualReporter,MissionManager,VerticalControl,HorizontalControl,SpeedControl,LoopControl,BuoyancyServo,ElevatorServo,MassServo,RudderServo,ThrusterServo,SBIT,IBIT,CBIT,Reporter,LogSplitter,
2015-09-29T09:46:16.646Z,1443519976.646 [DVL_micro](INFO): Initializing
2015-09-29T09:46:16.815Z,1443519976.815 [DeadReckonUsingMultipleVelocitySources](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T09:46:16.827Z,1443519976.827 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T09:46:16.939Z,1443519976.939 [BuoyancyServo](DEBUG): Initializing BuoyancyServo.
2015-09-29T09:46:16.950Z,1443519976.950 [ElevatorServo](DEBUG): Initializing ElevatorServo.
2015-09-29T09:46:16.962Z,1443519976.962 [MassServo](DEBUG): Initializing MassServo.
2015-09-29T09:46:16.975Z,1443519976.975 [RudderServo](DEBUG): Initializing RudderServo.
2015-09-29T09:46:16.987Z,1443519976.987 [ThrusterServo](DEBUG): Initializing ThrusterServo.
2015-09-29T09:46:17.212Z,1443519977.212 [DeadReckonUsingMultipleVelocitySources](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T09:46:17.213Z,1443519977.213 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T09:46:26.102Z,1443519986.102 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T09:46:26.441Z,1443519986.441 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T09:46:26.573Z,1443519986.573 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T09:46:26.975Z,1443519986.975 [DataOverHttps](INFO): setting available, lastComms_.elapsed()=0.003200
2015-09-29T09:46:26.979Z,1443519986.979 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T09:46:27.372Z,1443519987.372 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T09:46:27.772Z,1443519987.772 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T09:46:28.171Z,1443519988.171 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T09:46:28.582Z,1443519988.582 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T09:46:28.972Z,1443519988.972 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T09:46:29.372Z,1443519989.372 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T09:46:29.770Z,1443519989.770 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T09:46:30.176Z,1443519990.176 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T09:46:30.577Z,1443519990.577 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T09:46:30.977Z,1443519990.977 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T09:46:31.376Z,1443519991.376 [NAL9602](INFO): No messages in MT queue
2015-09-29T09:46:31.377Z,1443519991.377 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T09:46:31.776Z,1443519991.776 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T09:46:32.176Z,1443519992.176 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T09:46:32.576Z,1443519992.576 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T09:46:32.977Z,1443519992.977 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T09:46:33.377Z,1443519993.377 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T09:46:33.775Z,1443519993.775 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T09:46:34.181Z,1443519994.181 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T09:46:34.580Z,1443519994.580 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T09:46:34.980Z,1443519994.980 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T09:46:35.381Z,1443519995.381 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T09:46:35.779Z,1443519995.779 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T09:46:36.179Z,1443519996.179 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T09:46:36.580Z,1443519996.580 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T09:46:36.607Z,1443519996.607 [SBIT](IMPORTANT): Beginning Startup BIT
2015-09-29T09:46:36.981Z,1443519996.981 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T09:46:37.381Z,1443519997.381 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T09:46:37.776Z,1443519997.776 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T09:46:38.171Z,1443519998.171 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T09:46:38.571Z,1443519998.571 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T09:46:38.971Z,1443519998.971 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T09:46:39.372Z,1443519999.372 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T09:46:39.791Z,1443519999.791 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T09:46:40.172Z,1443520000.172 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T09:46:40.571Z,1443520000.571 [D