2015-09-29T09:38:12.719Z,1443519492.719 [Supervisor](DEBUG): Initializing supervisor.
2015-09-29T09:38:12.722Z,1443519492.722 [SyncHandler](DEBUG): Created PCaller Thread at 4034C4E0
2015-09-29T09:38:12.722Z,1443519492.722 [SyncHandler](INFO): Protected caller Thread ID is 761
2015-09-29T09:38:12.723Z,1443519492.723 [ComponentRegistry](DEBUG): Component "controlThread" handled in its own thread.
2015-09-29T09:38:12.725Z,1443519492.725 [controlThread ThreadHandler](DEBUG): Created PCaller Thread at 4037C4E0
2015-09-29T09:38:12.726Z,1443519492.726 [controlThread ThreadHandler](INFO): Protected caller Thread ID is 762
2015-09-29T09:38:12.729Z,1443519492.729 [ComponentRegistry](DEBUG): SyncComponent "CycleStarter" handled in the control thread.
2015-09-29T09:38:12.741Z,1443519492.741 [ComponentRegistry](DEBUG): Component "CommandLine" handled in its own thread.
2015-09-29T09:38:12.745Z,1443519492.745 [CommandLine ThreadHandler](DEBUG): Created PCaller Thread at 403AC4E0
2015-09-29T09:38:12.746Z,1443519492.746 [CommandLine ThreadHandler](INFO): Protected caller Thread ID is 763
2015-09-29T09:38:12.747Z,1443519492.747 [ComponentRegistry](DEBUG): Component "logger" handled in its own thread.
2015-09-29T09:38:12.749Z,1443519492.749 [logger ThreadHandler](DEBUG): Created PCaller Thread at 403DC4E0
2015-09-29T09:38:12.750Z,1443519492.750 [logger ThreadHandler](INFO): Protected caller Thread ID is 764
2015-09-29T09:38:12.752Z,1443519492.752 [ComponentRegistry](DEBUG): SyncComponent "LogSplitter" handled in the control thread.
2015-09-29T09:38:12.752Z,1443519492.752 [Supervisor](INFO): Looking for Config files in directory: Config/
2015-09-29T09:38:12.756Z,1443519492.756 [Supervisor](INFO): Opening Config file at: Config/Control.cfg
2015-09-29T09:38:13.163Z,1443519493.163 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Control
2015-09-29T09:38:13.165Z,1443519493.165 [Supervisor](INFO): Opening Config file at: Config/BIT.cfg
2015-09-29T09:38:13.357Z,1443519493.357 [ComponentRegistry](DEBUG): Loaded Config Component "Config/BIT
2015-09-29T09:38:13.359Z,1443519493.359 [Supervisor](INFO): Opening Config file at: Config/Derivation.cfg
2015-09-29T09:38:13.506Z,1443519493.506 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Derivation
2015-09-29T09:38:13.507Z,1443519493.507 [Supervisor](INFO): Opening Config file at: Config/Estimation.cfg
2015-09-29T09:38:13.658Z,1443519493.658 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Estimation
2015-09-29T09:38:13.659Z,1443519493.659 [Supervisor](INFO): Opening Config file at: Config/Guidance.cfg
2015-09-29T09:38:13.755Z,1443519493.755 [Supervisor](INFO): Opening Config file at: Config/Navigation.cfg
2015-09-29T09:38:13.978Z,1443519493.978 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Navigation
2015-09-29T09:38:13.979Z,1443519493.979 [Supervisor](INFO): Opening Config file at: Config/Sample.cfg
2015-09-29T09:38:14.078Z,1443519494.078 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Sample
2015-09-29T09:38:14.079Z,1443519494.079 [Supervisor](INFO): Opening Config file at: Config/Science.cfg
2015-09-29T09:38:14.399Z,1443519494.399 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Science
2015-09-29T09:38:14.399Z,1443519494.399 [Supervisor](INFO): Opening Config file at: Config/Sensor.cfg
2015-09-29T09:38:14.803Z,1443519494.803 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Sensor
2015-09-29T09:38:14.804Z,1443519494.804 [Supervisor](INFO): Opening Config file at: Config/Servo.cfg
2015-09-29T09:38:15.166Z,1443519495.166 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Servo
2015-09-29T09:38:15.168Z,1443519495.168 [Supervisor](INFO): Opening Config file at: Config/Simulator.cfg
2015-09-29T09:38:15.771Z,1443519495.771 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Simulator
2015-09-29T09:38:15.772Z,1443519495.772 [Supervisor](INFO): Opening Config file at: Config/logger.cfg
2015-09-29T09:38:16.009Z,1443519496.009 [ComponentRegistry](DEBUG): Loaded Config Component "Config/logger
2015-09-29T09:38:16.010Z,1443519496.010 [Supervisor](INFO): Opening Config file at: Config/secure.cfg
2015-09-29T09:38:16.122Z,1443519496.122 [ComponentRegistry](DEBUG): Loaded Config Component "Config/secure
2015-09-29T09:38:16.123Z,1443519496.123 [Supervisor](INFO): Opening Config file at: Config/vehicle.cfg
2015-09-29T09:38:16.650Z,1443519496.650 [ComponentRegistry](DEBUG): Loaded Config Component "Config/vehicle
2015-09-29T09:38:16.650Z,1443519496.650 [Supervisor](INFO): Opening Config file at: Config/workSite.cfg
2015-09-29T09:38:16.826Z,1443519496.826 [ComponentRegistry](DEBUG): Loaded Config Component "Config/workSite
2015-09-29T09:38:16.828Z,1443519496.828 [Supervisor](INFO): Looking for Config files in directory: Config/(none)/
2015-09-29T09:38:16.829Z,1443519496.829 [Supervisor](FAULT): Ignoring configuration overrides from Data/persisted.cfg
2015-09-29T09:38:16.833Z,1443519496.833 [Module Loader](DEBUG): Loading Module at Modules/Control.so
2015-09-29T09:38:16.909Z,1443519496.909 [VerticalControl](DEBUG): Construct VerticalControl.
2015-09-29T09:38:17.047Z,1443519497.047 [VerticalControl] Loaded
2015-09-29T09:38:17.048Z,1443519497.048 [ComponentRegistry](DEBUG): SyncComponent "VerticalControl" handled in the control thread.
2015-09-29T09:38:17.048Z,1443519497.048 [HorizontalControl](DEBUG): Construct HorizontalControl.
2015-09-29T09:38:17.129Z,1443519497.129 [HorizontalControl] Loaded
2015-09-29T09:38:17.130Z,1443519497.130 [ComponentRegistry](DEBUG): SyncComponent "HorizontalControl" handled in the control thread.
2015-09-29T09:38:17.130Z,1443519497.130 [SpeedControl](DEBUG): Construct SpeedControl.
2015-09-29T09:38:17.136Z,1443519497.136 [SpeedControl] Loaded
2015-09-29T09:38:17.137Z,1443519497.137 [ComponentRegistry](DEBUG): SyncComponent "SpeedControl" handled in the control thread.
2015-09-29T09:38:17.137Z,1443519497.137 [LoopControl](DEBUG): Construct LoopControl.
2015-09-29T09:38:17.138Z,1443519497.138 [LoopControl] Loaded
2015-09-29T09:38:17.138Z,1443519497.138 [ComponentRegistry](DEBUG): SyncComponent "LoopControl" handled in the control thread.
2015-09-29T09:38:17.139Z,1443519497.139 [Module Loader](DEBUG): Loaded Module: Control (Contains the Control components, such as Depth, Heading, and Speed Control)
2015-09-29T09:38:17.139Z,1443519497.139 [Module Loader](DEBUG): Loading Module at Modules/BIT.so
2015-09-29T09:38:17.299Z,1443519497.299 [SBIT](DEBUG): Construct Startup Built In Test.
2015-09-29T09:38:17.315Z,1443519497.315 [SBIT] Loaded
2015-09-29T09:38:17.315Z,1443519497.315 [ComponentRegistry](DEBUG): SyncComponent "SBIT" handled in the control thread.
2015-09-29T09:38:17.316Z,1443519497.316 [IBIT](DEBUG): Construct Initiated Built In Test.
2015-09-29T09:38:17.346Z,1443519497.346 [IBIT] Loaded
2015-09-29T09:38:17.346Z,1443519497.346 [ComponentRegistry](DEBUG): SyncComponent "IBIT" handled in the control thread.
2015-09-29T09:38:17.348Z,1443519497.348 [CBIT](DEBUG): Construct Continuous Built In Test.
2015-09-29T09:38:17.504Z,1443519497.504 [CBIT] Loaded
2015-09-29T09:38:17.504Z,1443519497.504 [ComponentRegistry](DEBUG): SyncComponent "CBIT" handled in the control thread.
2015-09-29T09:38:17.505Z,1443519497.505 [Module Loader](DEBUG): Loaded Module: BIT (Contains the BuiltInTest components, such as C Built In Test)
2015-09-29T09:38:17.505Z,1443519497.505 [Module Loader](DEBUG): Loading Module at Modules/Derivation.so
2015-09-29T09:38:17.547Z,1443519497.547 [DepthRateCalculator] Loaded
2015-09-29T09:38:17.547Z,1443519497.547 [ComponentRegistry](DEBUG): SyncComponent "DepthRateCalculator" handled in the control thread.
2015-09-29T09:38:17.553Z,1443519497.553 [PitchRateCalculator] Loaded
2015-09-29T09:38:17.553Z,1443519497.553 [ComponentRegistry](DEBUG): SyncComponent "PitchRateCalculator" handled in the control thread.
2015-09-29T09:38:17.564Z,1443519497.564 [SpeedCalculator] Loaded
2015-09-29T09:38:17.565Z,1443519497.565 [ComponentRegistry](DEBUG): SyncComponent "SpeedCalculator" handled in the control thread.
2015-09-29T09:38:17.582Z,1443519497.582 [TempGradientCalculator] Loaded
2015-09-29T09:38:17.582Z,1443519497.582 [ComponentRegistry](DEBUG): SyncComponent "TempGradientCalculator" handled in the control thread.
2015-09-29T09:38:17.603Z,1443519497.603 [VerticalTemperatureHomogeneityIndexCalculator] Loaded
2015-09-29T09:38:17.604Z,1443519497.604 [ComponentRegistry](DEBUG): SyncComponent "VerticalTemperatureHomogeneityIndexCalculator" handled in the control thread.
2015-09-29T09:38:17.609Z,1443519497.609 [YawRateCalculator] Loaded
2015-09-29T09:38:17.613Z,1443519497.613 [ComponentRegistry](DEBUG): SyncComponent "YawRateCalculator" handled in the control thread.
2015-09-29T09:38:17.614Z,1443519497.614 [Module Loader](DEBUG): Loaded Module: Derivation (Contains the base derivation components)
2015-09-29T09:38:17.615Z,1443519497.615 [Module Loader](DEBUG): Loading Module at Modules/Estimation.so
2015-09-29T09:38:17.735Z,1443519497.735 [StratificationFrontDetector](INFO): threshold set to: 0.399988 degC
2015-09-29T09:38:17.736Z,1443519497.736 [StratificationFrontDetector](DEBUG): (re)initializing
2015-09-29T09:38:17.736Z,1443519497.736 [StratificationFrontDetector] Loaded
2015-09-29T09:38:17.736Z,1443519497.736 [ComponentRegistry](DEBUG): SyncComponent "StratificationFrontDetector" handled in the control thread.
2015-09-29T09:38:17.737Z,1443519497.737 [Module Loader](DEBUG): Loaded Module: Estimation (Contains the base estimation components)
2015-09-29T09:38:17.737Z,1443519497.737 [Module Loader](DEBUG): Loading Module at Modules/Guidance.so
2015-09-29T09:38:18.031Z,1443519498.031 [Module Loader](DEBUG): Loaded Module: Guidance (Contains behaviors and commands)
2015-09-29T09:38:18.032Z,1443519498.032 [Module Loader](DEBUG): Loading Module at Modules/Navigation.so
2015-09-29T09:38:18.164Z,1443519498.164 [DeadReckonUsingMultipleVelocitySources] Loaded
2015-09-29T09:38:18.165Z,1443519498.165 [ComponentRegistry](DEBUG): SyncComponent "DeadReckonUsingMultipleVelocitySources" handled in the control thread.
2015-09-29T09:38:18.226Z,1443519498.226 [DeadReckonUsingSpeedCalculator] Loaded
2015-09-29T09:38:18.226Z,1443519498.226 [ComponentRegistry](DEBUG): SyncComponent "DeadReckonUsingSpeedCalculator" handled in the control thread.
2015-09-29T09:38:18.244Z,1443519498.244 [NavChart] Loaded
2015-09-29T09:38:18.244Z,1443519498.244 [ComponentRegistry](DEBUG): SyncComponent "NavChart" handled in the control thread.
2015-09-29T09:38:18.253Z,1443519498.253 [UniversalFixResidualReporter] Loaded
2015-09-29T09:38:18.254Z,1443519498.254 [ComponentRegistry](DEBUG): SyncComponent "UniversalFixResidualReporter" handled in the control thread.
2015-09-29T09:38:18.254Z,1443519498.254 [Module Loader](DEBUG): Loaded Module: Navigation (Contains the base navigation components)
2015-09-29T09:38:18.255Z,1443519498.255 [Module Loader](DEBUG): Loading Module at Modules/Sample.so
2015-09-29T09:38:18.263Z,1443519498.263 [Module Loader](DEBUG): Loaded Module: Sample (This is a Sample Module of Sample Components)
2015-09-29T09:38:18.264Z,1443519498.264 [Module Loader](DEBUG): Loading Module at Modules/Science.so
2015-09-29T09:38:18.567Z,1443519498.567 [CTD_NeilBrown] Loaded
2015-09-29T09:38:18.567Z,1443519498.567 [ComponentRegistry](DEBUG): Component "CTD_NeilBrown" handled in its own thread.
2015-09-29T09:38:18.569Z,1443519498.569 [CTD_NeilBrown ThreadHandler](DEBUG): Created PCaller Thread at 4059D4E0
2015-09-29T09:38:18.570Z,1443519498.570 [CTD_NeilBrown ThreadHandler](INFO): Protected caller Thread ID is 810
2015-09-29T09:38:18.583Z,1443519498.583 [ISUS] Loaded
2015-09-29T09:38:18.583Z,1443519498.583 [ComponentRegistry](DEBUG): SyncComponent "ISUS" handled in the control thread.
2015-09-29T09:38:18.602Z,1443519498.602 [PAR_Licor] Loaded
2015-09-29T09:38:18.602Z,1443519498.602 [ComponentRegistry](DEBUG): SyncComponent "PAR_Licor" handled in the control thread.
2015-09-29T09:38:18.658Z,1443519498.658 [WetLabsBB2FL] Loaded
2015-09-29T09:38:18.659Z,1443519498.659 [ComponentRegistry](DEBUG): Component "WetLabsBB2FL" handled in its own thread.
2015-09-29T09:38:18.661Z,1443519498.661 [WetLabsBB2FL ThreadHandler](DEBUG): Created PCaller Thread at 405CD4E0
2015-09-29T09:38:18.662Z,1443519498.662 [WetLabsBB2FL ThreadHandler](INFO): Protected caller Thread ID is 811
2015-09-29T09:38:18.662Z,1443519498.662 [Module Loader](DEBUG): Loaded Module: Science (Contains the science components)
2015-09-29T09:38:18.663Z,1443519498.663 [Module Loader](DEBUG): Loading Module at Modules/Sensor.so
2015-09-29T09:38:19.392Z,1443519499.392 [AHRS_sp3003D] Loaded
2015-09-29T09:38:19.393Z,1443519499.393 [ComponentRegistry](DEBUG): SyncComponent "AHRS_sp3003D" handled in the control thread.
2015-09-29T09:38:19.591Z,1443519499.591 [DataOverHttps] Loaded
2015-09-29T09:38:19.592Z,1443519499.592 [ComponentRegistry](DEBUG): SyncComponent "DataOverHttps" handled in the control thread.
2015-09-29T09:38:19.605Z,1443519499.605 [Depth_Keller] Loaded
2015-09-29T09:38:19.606Z,1443519499.606 [ComponentRegistry](DEBUG): SyncComponent "Depth_Keller" handled in the control thread.
2015-09-29T09:38:19.611Z,1443519499.611 [DropWeight] Loaded
2015-09-29T09:38:19.611Z,1443519499.611 [ComponentRegistry](DEBUG): SyncComponent "DropWeight" handled in the control thread.
2015-09-29T09:38:19.768Z,1443519499.768 [DVL_micro] Loaded
2015-09-29T09:38:19.768Z,1443519499.768 [ComponentRegistry](DEBUG): SyncComponent "DVL_micro" handled in the control thread.
2015-09-29T09:38:19.878Z,1443519499.878 [NAL9602] Loaded
2015-09-29T09:38:19.878Z,1443519499.878 [ComponentRegistry](DEBUG): SyncComponent "NAL9602" handled in the control thread.
2015-09-29T09:38:19.925Z,1443519499.925 [Onboard] Loaded
2015-09-29T09:38:19.925Z,1443519499.925 [ComponentRegistry](DEBUG): SyncComponent "Onboard" handled in the control thread.
2015-09-29T09:38:19.937Z,1443519499.937 [Radio_Surface] Loaded
2015-09-29T09:38:19.937Z,1443519499.937 [ComponentRegistry](DEBUG): Component "Radio_Surface" handled in its own thread.
2015-09-29T09:38:19.941Z,1443519499.941 [Radio_Surface ThreadHandler](DEBUG): Created PCaller Thread at 408114E0
2015-09-29T09:38:19.942Z,1443519499.942 [Radio_Surface ThreadHandler](INFO): Protected caller Thread ID is 812
2015-09-29T09:38:20.102Z,1443519500.102 [DAT] Loaded
2015-09-29T09:38:20.102Z,1443519500.102 [ComponentRegistry](DEBUG): SyncComponent "DAT" handled in the control thread.
2015-09-29T09:38:20.109Z,1443519500.109 [SCPI] Loaded
2015-09-29T09:38:20.109Z,1443519500.109 [ComponentRegistry](DEBUG): SyncComponent "SCPI" handled in the control thread.
2015-09-29T09:38:20.110Z,1443519500.110 [Module Loader](DEBUG): Loaded Module: Sensor (Contains the sensor components)
2015-09-29T09:38:20.110Z,1443519500.110 [Module Loader](DEBUG): Loading Module at Modules/Servo.so
2015-09-29T09:38:20.240Z,1443519500.240 [BuoyancyServo] Loaded
2015-09-29T09:38:20.241Z,1443519500.241 [ComponentRegistry](DEBUG): SyncComponent "BuoyancyServo" handled in the control thread.
2015-09-29T09:38:20.258Z,1443519500.258 [ElevatorServo] Loaded
2015-09-29T09:38:20.258Z,1443519500.258 [ComponentRegistry](DEBUG): SyncComponent "ElevatorServo" handled in the control thread.
2015-09-29T09:38:20.270Z,1443519500.270 [MassServo] Loaded
2015-09-29T09:38:20.270Z,1443519500.270 [ComponentRegistry](DEBUG): SyncComponent "MassServo" handled in the control thread.
2015-09-29T09:38:20.282Z,1443519500.282 [RudderServo] Loaded
2015-09-29T09:38:20.282Z,1443519500.282 [ComponentRegistry](DEBUG): SyncComponent "RudderServo" handled in the control thread.
2015-09-29T09:38:20.298Z,1443519500.298 [ThrusterServo] Loaded
2015-09-29T09:38:20.298Z,1443519500.298 [ComponentRegistry](DEBUG): SyncComponent "ThrusterServo" handled in the control thread.
2015-09-29T09:38:20.299Z,1443519500.299 [Module Loader](DEBUG): Loaded Module: Servo (This is the module containing motor controllers)
2015-09-29T09:38:20.299Z,1443519500.299 [Module Loader](DEBUG): Loading Module at Modules/Simulator.so
2015-09-29T09:38:20.502Z,1443519500.502 [InternalSim] Loaded
2015-09-29T09:38:20.502Z,1443519500.502 [ComponentRegistry](DEBUG): SyncComponent "InternalSim" handled in the control thread.
2015-09-29T09:38:20.503Z,1443519500.503 [Module Loader](DEBUG): Loaded Module: Simulator (This is the module containing the Simulator)
2015-09-29T09:38:20.504Z,1443519500.504 [Module Loader](DEBUG): Loading Module at Modules/Trigger.so
2015-09-29T09:38:20.543Z,1443519500.543 [Module Loader](DEBUG): Loaded Module: Trigger (Contains triggers for use in missions)
2015-09-29T09:38:20.551Z,1443519500.551 [ComponentRegistry](DEBUG): SyncComponent "MissionManager" handled in the control thread.
2015-09-29T09:38:20.552Z,1443519500.552 [ComponentRegistry](DEBUG): SyncComponent "Reporter" handled in the control thread.
2015-09-29T09:38:20.559Z,1443519500.559 [ComponentRegistry](DEBUG): Component "NavChartDb" handled in its own thread.
2015-09-29T09:38:20.562Z,1443519500.562 [NavChartDb ThreadHandler](DEBUG): Created PCaller Thread at 408BF4E0
2015-09-29T09:38:20.562Z,1443519500.562 [NavChartDb ThreadHandler](INFO): Protected caller Thread ID is 813
2015-09-29T09:38:20.567Z,1443519500.567 [Supervisor](INFO): Main Thread ID is 760
2015-09-29T09:38:20.567Z,1443519500.567 [Supervisor](DEBUG): Running supervisor.
2015-09-29T09:38:20.567Z,1443519500.567 [CommandLine ThreadHandler](INFO): Handler Thread ID is 814
2015-09-29T09:38:20.574Z,1443519500.574 [controlThread ThreadHandler](INFO): Handler Thread ID is 815
2015-09-29T09:38:20.574Z,1443519500.574 [controlThread](DEBUG): Initializing ControlThread
2015-09-29T09:38:20.575Z,1443519500.575 [VerticalControl](DEBUG): Initialize VerticalControlComponent.
2015-09-29T09:38:20.577Z,1443519500.577 [HorizontalControl](DEBUG): Initialize HorizontalControlComponent.
2015-09-29T09:38:20.578Z,1443519500.578 [SpeedControl](DEBUG): Initialize SpeedControlComponent.
2015-09-29T09:38:20.578Z,1443519500.578 [LoopControl](DEBUG): Initialize LoopControlComponent.
2015-09-29T09:38:20.579Z,1443519500.579 [SBIT](INFO): Initialize SBIT Component.
2015-09-29T09:38:20.579Z,1443519500.579 [SBIT](IMPORTANT): Tethys CM Info: SVN revision:12634
2015-09-29T09:38:20.581Z,1443519500.581 [SBIT](INFO): Kernel Reporting Different Release From Configuration.
Kernel Expected: 2.6.32-45-generic-pae
Kernel Reported: 2.6.27.8
2015-09-29T09:38:20.581Z,1443519500.581 [SBIT](INFO): Kernel Reporting Different Version From Configuration.
Kernel Expected: #102-Ubuntu SMP Wed Jan 2 22:10:16 UTC 2013
Kernel Reported: #641 PREEMPT Mon Sep 28 16:45:10 PDT 2015
2015-09-29T09:38:20.582Z,1443519500.582 [SBIT](INFO): Beginning SBIT in 20.000000 seconds.
2015-09-29T09:38:20.583Z,1443519500.583 [IBIT](INFO): Initialize IBIT Component.
2015-09-29T09:38:20.583Z,1443519500.583 [CBIT](DEBUG): Initialize CBIT Component.
2015-09-29T09:38:20.584Z,1443519500.584 [CBIT](FAULT): LAST RESTART WAS UNINTENTIONAL.
2015-09-29T09:38:20.584Z,1443519500.584 [CBIT](INFO): Last reboot was NOT due to watchdog timer.
2015-09-29T09:38:20.584Z,1443519500.584 [DepthRateCalculator](DEBUG): Initializing DepthRateCalculator.
2015-09-29T09:38:20.584Z,1443519500.584 [PitchRateCalculator](DEBUG): Initializing PitchRateCalculator.
2015-09-29T09:38:20.585Z,1443519500.585 [SpeedCalculator](DEBUG): Initializing SpeedCalculator.
2015-09-29T09:38:20.585Z,1443519500.585 [TempGradientCalculator](DEBUG): Initializing TempGradientCalculator.
2015-09-29T09:38:20.586Z,1443519500.586 [VerticalTemperatureHomogeneityIndexCalculator](DEBUG): (re)initializing
2015-09-29T09:38:20.586Z,1443519500.586 [YawRateCalculator](DEBUG): Initializing YawRateCalculator.
2015-09-29T09:38:20.587Z,1443519500.587 [DeadReckonUsingMultipleVelocitySources](DEBUG): Initializing DeadReckonUsingMultipleVelocitySources component.
2015-09-29T09:38:20.588Z,1443519500.588 [DeadReckonUsingMultipleVelocitySources](INFO): Will consider orientation measurement stale after 120s.
2015-09-29T09:38:20.588Z,1443519500.588 [DeadReckonUsingMultipleVelocitySources](INFO): Will consider velocity measurement stale after 20s.
2015-09-29T09:38:20.588Z,1443519500.588 [DeadReckonUsingSpeedCalculator](DEBUG): Initializing DeadReckonUsingSpeedCalculator component.
2015-09-29T09:38:20.589Z,1443519500.589 [DeadReckonUsingSpeedCalculator](INFO): Will consider orientation measurement stale after 120s.
2015-09-29T09:38:20.589Z,1443519500.589 [DeadReckonUsingSpeedCalculator](INFO): Will consider velocity measurement stale after 20s.
2015-09-29T09:38:20.590Z,1443519500.590 [NavChart](DEBUG): Initialize NavChart Navigation.
2015-09-29T09:38:20.590Z,1443519500.590 [UniversalFixResidualReporter](DEBUG): Initializing UniversalFixResidualReporter component.
2015-09-29T09:38:20.595Z,1443519500.595 [InternalSim](DEBUG):  InternalSim initializing...
2015-09-29T09:38:20.631Z,1443519500.631 [logger ThreadHandler](INFO): Handler Thread ID is 816
2015-09-29T09:38:20.679Z,1443519500.679 [CTD_NeilBrown ThreadHandler](INFO): Handler Thread ID is 817
2015-09-29T09:38:20.686Z,1443519500.686 [WetLabsBB2FL ThreadHandler](INFO): Handler Thread ID is 818
2015-09-29T09:38:20.726Z,1443519500.726 [Radio_Surface ThreadHandler](INFO): Handler Thread ID is 819
2015-09-29T09:38:20.741Z,1443519500.741 [MissionManager](INFO): Loading Mission: Missions/Startup.xml
2015-09-29T09:38:20.762Z,1443519500.762 [NavChartDb ThreadHandler](INFO): Handler Thread ID is 820
2015-09-29T09:38:20.796Z,1443519500.796 [NavChartDb](INFO): Looking for Electronic Nav Chart files in directory: Resources
2015-09-29T09:38:20.827Z,1443519500.827 [Startup:A.GoToSurface](DEBUG): Construct GoToSurface.
2015-09-29T09:38:20.838Z,1443519500.838 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US1WC07M.000
2015-09-29T09:38:20.838Z,1443519500.838 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US2WC11M.000
2015-09-29T09:38:20.839Z,1443519500.839 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US3CA52M.000
2015-09-29T09:38:20.839Z,1443519500.839 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US4CA60M.000
2015-09-29T09:38:20.839Z,1443519500.839 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA50M.000
2015-09-29T09:38:20.839Z,1443519500.839 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA61M.000
2015-09-29T09:38:20.840Z,1443519500.840 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA62M.000
2015-09-29T09:38:20.840Z,1443519500.840 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA83M.000
2015-09-29T09:38:20.861Z,1443519500.861 [MissionManager](DEBUG): 
<?xml version="1.0" encoding="UTF-8"?>
<Mission xmlns="Tethys"
       xmlns:Control="Tethys/Control"
       xmlns:Guidance="Tethys/Guidance" 
       xmlns:Units="Tethys/Units"
       xmlns:Universal="Tethys/Universal"
       xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
       xsi:schemaLocation="Tethys http://okeanids.mbari.org/tethys/Xml/Tethys.xsd
                           Tethys/Control http://okeanids.mbari.org/tethys/Xml/Control.xsd
                           Tethys/Guidance http://okeanids.mbari.org/tethys/Xml/Guidance.xsd
                           Tethys/Units http://okeanids.mbari.org/tethys/Xml/Units.xsd
                           Tethys/Universal http://okeanids.mbari.org/tethys/Xml/Universal.xsd"
       Id="Startup">

    <Guidance:GoToSurface>
        <Progression/>
    </Guidance:GoToSurface>

    <Aggregate Id="StartupSatComms">

        <Sequence/>

        <ReadDatum>
            <Timeout Duration="P1M" />
            <Universal:latitude_fix/>
        </ReadDatum>

        <ReadDatum>
            <Timeout Duration="P1M" />
            <Universal:platform_communications/>
        </ReadDatum>

    </Aggregate>

</Mission>


2015-09-29T09:38:20.862Z,1443519500.862 [MissionManager](INFO): Loading Mission: Missions/Default.xml
2015-09-29T09:38:20.919Z,1443519500.919 [MissionManager](INFO): DefineArg Default.ElapsedSinceDefaultStarted = 0.000000 min
2015-09-29T09:38:20.920Z,1443519500.920 [Default:A.GoToSurface](DEBUG): Construct GoToSurface.
2015-09-29T09:38:20.958Z,1443519500.958 [Default:CheckIn:Read_Iridium:A_Timeout:A.Execute](DEBUG): Construct Execute.
2015-09-29T09:38:20.961Z,1443519500.961 [Default:CheckIn:C.Wait](DEBUG): Construct Wait.
2015-09-29T09:38:20.987Z,1443519500.987 [Default:D.Execute](DEBUG): Construct Execute.
2015-09-29T09:38:21.014Z,1443519501.014 [MissionManager](DEBUG): 
<?xml version="1.0" encoding="UTF-8"?>
<Mission xmlns="Tethys"
xmlns:Guidance="Tethys/Guidance"
xmlns:Units="Tethys/Units"
xmlns:Universal="Tethys/Universal"
xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
xsi:schemaLocation="Tethys http://okeanids.mbari.org/tethys/Xml/Tethys.xsd
Tethys/Guidance http://okeanids.mbari.org/tethys/Xml/Guidance.xsd
Tethys/Units http://okeanids.mbari.org/tethys/Xml/Units.xsd
Tethys/Universal http://okeanids.mbari.org/tethys/Xml/Universal.xsd"
Id="Default">

    <DefineArg Name="ElapsedSinceDefaultStarted"><Units:minute/><Value>0</Value></DefineArg>

    <Guidance:GoToSurface>
        <Progression/>
    </Guidance:GoToSurface>

    <Aggregate Id="CheckIn">

        <Sequence Repeat="288"/>

        <ReadDatum Id="Read_GPS">
            <Sequence/>
            <Timeout Duration="P5M"/>
            <Universal:time_fix/>
        </ReadDatum>

        <ReadDatum Id="Read_Iridium">
            <Sequence/>
            <Timeout Duration="P2H">
                <Guidance:Execute>
                    <Sequence/>
                    <Setting><Guidance:Execute.command/><String>Burn 300</String></Setting>
                </Guidance:Execute>
                <Syslog Severity="Critical">Dropped weight due to communications timeout.</Syslog>
            </Timeout>
            <Universal:platform_communications/>
        </ReadDatum>

        <Guidance:Wait>
            <Sequence/>
            <Setting><Guidance:Wait.duration/><Units:minute/><Value>5</Value></Setting>
        </Guidance:Wait>

        <Assign><Sequence/><Arg Name="ElapsedSinceDefaultStarted"/><Elapsed><Universal:mission_started/></Elapsed></Assign>

        <Syslog Severity="Important">Default mission has been running for <Arg Name="ElapsedSinceDefaultStarted"/><Units:minute/></Syslog>

    </Aggregate>

    <Syslog Severity="Important">Restarting logs and Default mission.</Syslog>

    <Guidance:Execute>
        <Sequence/>
        <Setting><Guidance:Execute.command/><String>restart logs</String></Setting>
    </Guidance:Execute>

</Mission>


2015-09-29T09:38:21.023Z,1443519501.023 [controlThread](DEBUG): Component order: CycleStarter,InternalSim,ISUS,PAR_Licor,AHRS_sp3003D,DataOverHttps,Depth_Keller,DropWeight,DVL_micro,NAL9602,Onboard,DAT,SCPI,PAR_Licor,Depth_Keller,DepthRateCalculator,PitchRateCalculator,SpeedCalculator,TempGradientCalculator,VerticalTemperatureHomogeneityIndexCalculator,YawRateCalculator,StratificationFrontDetector,DeadReckonUsingMultipleVelocitySources,DeadReckonUsingSpeedCalculator,NavChart,UniversalFixResidualReporter,MissionManager,VerticalControl,HorizontalControl,SpeedControl,LoopControl,BuoyancyServo,ElevatorServo,MassServo,RudderServo,ThrusterServo,SBIT,IBIT,CBIT,Reporter,LogSplitter,
2015-09-29T09:38:21.275Z,1443519501.275 [DVL_micro](INFO): Initializing
2015-09-29T09:38:21.430Z,1443519501.430 [DeadReckonUsingMultipleVelocitySources](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T09:38:21.442Z,1443519501.442 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T09:38:21.562Z,1443519501.562 [BuoyancyServo](DEBUG): Initializing BuoyancyServo.
2015-09-29T09:38:21.574Z,1443519501.574 [ElevatorServo](DEBUG): Initializing ElevatorServo.
2015-09-29T09:38:21.587Z,1443519501.587 [MassServo](DEBUG): Initializing MassServo.
2015-09-29T09:38:21.594Z,1443519501.594 [RudderServo](DEBUG): Initializing RudderServo.
2015-09-29T09:38:21.614Z,1443519501.614 [ThrusterServo](DEBUG): Initializing ThrusterServo.
2015-09-29T09:38:21.876Z,1443519501.876 [DeadReckonUsingMultipleVelocitySources](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T09:38:21.877Z,1443519501.877 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T09:38:30.895Z,1443519510.895 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T09:38:31.229Z,1443519511.229 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T09:38:31.372Z,1443519511.372 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T09:38:31.764Z,1443519511.764 [DataOverHttps](INFO): setting available, lastComms_.elapsed()=0.003100
2015-09-29T09:38:31.768Z,1443519511.768 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T09:38:32.163Z,1443519512.163 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T09:38:32.564Z,1443519512.564 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T09:38:32.963Z,1443519512.963 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T09:38:33.363Z,1443519513.363 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T09:38:33.762Z,1443519513.762 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T09:38:34.162Z,1443519514.162 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T09:38:34.562Z,1443519514.562 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T09:38:34.963Z,1443519514.963 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T09:38:35.363Z,1443519515.363 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T09:38:35.763Z,1443519515.763 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T09:38:36.164Z,1443519516.164 [NAL9602](INFO): No messages in MT queue
2015-09-29T09:38:36.165Z,1443519516.165 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T09:38:36.567Z,1443519516.567 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T09:38:36.968Z,1443519516.968 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T09:38:37.367Z,1443519517.367 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T09:38:37.764Z,1443519517.764 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T09:38:38.167Z,1443519518.167 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T09:38:38.567Z,1443519518.567 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T09:38:38.967Z,1443519518.967 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T09:38:39.365Z,1443519519.365 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T09:38:39.765Z,1443519519.765 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T09:38:40.165Z,1443519520.165 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T09:38:40.567Z,1443519520.567 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T09:38:40.967Z,1443519520.967 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T09:38:41.363Z,1443519521.363 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T09:38:41.415Z,1443519521.415 [SBIT](IMPORTANT): Beginning Startup BIT
2015-09-29T09:38:41.762Z,1443519521.762 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T09:38:42.162Z,1443519522.162 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T09:38:42.563Z,1443519522.563 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T09:38:42.962Z,1443519522.962 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T09:38:43.363Z,1443519523.363 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T09:38:43.762Z,1443519523.762 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T09:38:44.163Z,1443519524.163 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T09:38:44.563Z,1443519524.563 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T09:38:44.963Z,1443519524.963 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T09:38:45.362Z,1443519525.362 [D