2015-09-29T09:30:18.853Z,1443519018.853 [Supervisor](DEBUG): Initializing supervisor.
2015-09-29T09:30:18.856Z,1443519018.856 [SyncHandler](DEBUG): Created PCaller Thread at 4034C4E0
2015-09-29T09:30:18.856Z,1443519018.856 [SyncHandler](INFO): Protected caller Thread ID is 761
2015-09-29T09:30:18.857Z,1443519018.857 [ComponentRegistry](DEBUG): Component "controlThread" handled in its own thread.
2015-09-29T09:30:18.859Z,1443519018.859 [controlThread ThreadHandler](DEBUG): Created PCaller Thread at 4037C4E0
2015-09-29T09:30:18.860Z,1443519018.860 [controlThread ThreadHandler](INFO): Protected caller Thread ID is 762
2015-09-29T09:30:18.863Z,1443519018.863 [ComponentRegistry](DEBUG): SyncComponent "CycleStarter" handled in the control thread.
2015-09-29T09:30:18.879Z,1443519018.879 [ComponentRegistry](DEBUG): Component "CommandLine" handled in its own thread.
2015-09-29T09:30:18.883Z,1443519018.883 [CommandLine ThreadHandler](DEBUG): Created PCaller Thread at 403AC4E0
2015-09-29T09:30:18.884Z,1443519018.884 [CommandLine ThreadHandler](INFO): Protected caller Thread ID is 763
2015-09-29T09:30:18.884Z,1443519018.884 [ComponentRegistry](DEBUG): Component "logger" handled in its own thread.
2015-09-29T09:30:18.887Z,1443519018.887 [logger ThreadHandler](DEBUG): Created PCaller Thread at 403DC4E0
2015-09-29T09:30:18.888Z,1443519018.888 [logger ThreadHandler](INFO): Protected caller Thread ID is 764
2015-09-29T09:30:18.890Z,1443519018.890 [ComponentRegistry](DEBUG): SyncComponent "LogSplitter" handled in the control thread.
2015-09-29T09:30:18.890Z,1443519018.890 [Supervisor](INFO): Looking for Config files in directory: Config/
2015-09-29T09:30:18.894Z,1443519018.894 [Supervisor](INFO): Opening Config file at: Config/Control.cfg
2015-09-29T09:30:19.282Z,1443519019.282 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Control
2015-09-29T09:30:19.284Z,1443519019.284 [Supervisor](INFO): Opening Config file at: Config/BIT.cfg
2015-09-29T09:30:19.472Z,1443519019.472 [ComponentRegistry](DEBUG): Loaded Config Component "Config/BIT
2015-09-29T09:30:19.474Z,1443519019.474 [Supervisor](INFO): Opening Config file at: Config/Derivation.cfg
2015-09-29T09:30:19.616Z,1443519019.616 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Derivation
2015-09-29T09:30:19.617Z,1443519019.617 [Supervisor](INFO): Opening Config file at: Config/Estimation.cfg
2015-09-29T09:30:19.764Z,1443519019.764 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Estimation
2015-09-29T09:30:19.765Z,1443519019.765 [Supervisor](INFO): Opening Config file at: Config/Guidance.cfg
2015-09-29T09:30:19.859Z,1443519019.859 [Supervisor](INFO): Opening Config file at: Config/Navigation.cfg
2015-09-29T09:30:20.076Z,1443519020.076 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Navigation
2015-09-29T09:30:20.077Z,1443519020.077 [Supervisor](INFO): Opening Config file at: Config/Sample.cfg
2015-09-29T09:30:20.172Z,1443519020.172 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Sample
2015-09-29T09:30:20.173Z,1443519020.173 [Supervisor](INFO): Opening Config file at: Config/Science.cfg
2015-09-29T09:30:20.484Z,1443519020.484 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Science
2015-09-29T09:30:20.485Z,1443519020.485 [Supervisor](INFO): Opening Config file at: Config/Sensor.cfg
2015-09-29T09:30:20.884Z,1443519020.884 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Sensor
2015-09-29T09:30:20.885Z,1443519020.885 [Supervisor](INFO): Opening Config file at: Config/Servo.cfg
2015-09-29T09:30:21.236Z,1443519021.236 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Servo
2015-09-29T09:30:21.238Z,1443519021.238 [Supervisor](INFO): Opening Config file at: Config/Simulator.cfg
2015-09-29T09:30:21.829Z,1443519021.829 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Simulator
2015-09-29T09:30:21.830Z,1443519021.830 [Supervisor](INFO): Opening Config file at: Config/logger.cfg
2015-09-29T09:30:22.056Z,1443519022.056 [ComponentRegistry](DEBUG): Loaded Config Component "Config/logger
2015-09-29T09:30:22.057Z,1443519022.057 [Supervisor](INFO): Opening Config file at: Config/secure.cfg
2015-09-29T09:30:22.168Z,1443519022.168 [ComponentRegistry](DEBUG): Loaded Config Component "Config/secure
2015-09-29T09:30:22.169Z,1443519022.169 [Supervisor](INFO): Opening Config file at: Config/vehicle.cfg
2015-09-29T09:30:22.680Z,1443519022.680 [ComponentRegistry](DEBUG): Loaded Config Component "Config/vehicle
2015-09-29T09:30:22.680Z,1443519022.680 [Supervisor](INFO): Opening Config file at: Config/workSite.cfg
2015-09-29T09:30:22.867Z,1443519022.867 [ComponentRegistry](DEBUG): Loaded Config Component "Config/workSite
2015-09-29T09:30:22.869Z,1443519022.869 [Supervisor](INFO): Looking for Config files in directory: Config/(none)/
2015-09-29T09:30:22.869Z,1443519022.869 [Supervisor](FAULT): Ignoring configuration overrides from Data/persisted.cfg
2015-09-29T09:30:22.874Z,1443519022.874 [Module Loader](DEBUG): Loading Module at Modules/Control.so
2015-09-29T09:30:22.948Z,1443519022.948 [VerticalControl](DEBUG): Construct VerticalControl.
2015-09-29T09:30:23.086Z,1443519023.086 [VerticalControl] Loaded
2015-09-29T09:30:23.086Z,1443519023.086 [ComponentRegistry](DEBUG): SyncComponent "VerticalControl" handled in the control thread.
2015-09-29T09:30:23.087Z,1443519023.087 [HorizontalControl](DEBUG): Construct HorizontalControl.
2015-09-29T09:30:23.168Z,1443519023.168 [HorizontalControl] Loaded
2015-09-29T09:30:23.168Z,1443519023.168 [ComponentRegistry](DEBUG): SyncComponent "HorizontalControl" handled in the control thread.
2015-09-29T09:30:23.169Z,1443519023.169 [SpeedControl](DEBUG): Construct SpeedControl.
2015-09-29T09:30:23.174Z,1443519023.174 [SpeedControl] Loaded
2015-09-29T09:30:23.175Z,1443519023.175 [ComponentRegistry](DEBUG): SyncComponent "SpeedControl" handled in the control thread.
2015-09-29T09:30:23.175Z,1443519023.175 [LoopControl](DEBUG): Construct LoopControl.
2015-09-29T09:30:23.176Z,1443519023.176 [LoopControl] Loaded
2015-09-29T09:30:23.176Z,1443519023.176 [ComponentRegistry](DEBUG): SyncComponent "LoopControl" handled in the control thread.
2015-09-29T09:30:23.177Z,1443519023.177 [Module Loader](DEBUG): Loaded Module: Control (Contains the Control components, such as Depth, Heading, and Speed Control)
2015-09-29T09:30:23.177Z,1443519023.177 [Module Loader](DEBUG): Loading Module at Modules/BIT.so
2015-09-29T09:30:23.337Z,1443519023.337 [SBIT](DEBUG): Construct Startup Built In Test.
2015-09-29T09:30:23.349Z,1443519023.349 [SBIT] Loaded
2015-09-29T09:30:23.349Z,1443519023.349 [ComponentRegistry](DEBUG): SyncComponent "SBIT" handled in the control thread.
2015-09-29T09:30:23.350Z,1443519023.350 [IBIT](DEBUG): Construct Initiated Built In Test.
2015-09-29T09:30:23.384Z,1443519023.384 [IBIT] Loaded
2015-09-29T09:30:23.384Z,1443519023.384 [ComponentRegistry](DEBUG): SyncComponent "IBIT" handled in the control thread.
2015-09-29T09:30:23.386Z,1443519023.386 [CBIT](DEBUG): Construct Continuous Built In Test.
2015-09-29T09:30:23.541Z,1443519023.541 [CBIT] Loaded
2015-09-29T09:30:23.541Z,1443519023.541 [ComponentRegistry](DEBUG): SyncComponent "CBIT" handled in the control thread.
2015-09-29T09:30:23.542Z,1443519023.542 [Module Loader](DEBUG): Loaded Module: BIT (Contains the BuiltInTest components, such as C Built In Test)
2015-09-29T09:30:23.542Z,1443519023.542 [Module Loader](DEBUG): Loading Module at Modules/Derivation.so
2015-09-29T09:30:23.580Z,1443519023.580 [DepthRateCalculator] Loaded
2015-09-29T09:30:23.580Z,1443519023.580 [ComponentRegistry](DEBUG): SyncComponent "DepthRateCalculator" handled in the control thread.
2015-09-29T09:30:23.589Z,1443519023.589 [PitchRateCalculator] Loaded
2015-09-29T09:30:23.590Z,1443519023.590 [ComponentRegistry](DEBUG): SyncComponent "PitchRateCalculator" handled in the control thread.
2015-09-29T09:30:23.601Z,1443519023.601 [SpeedCalculator] Loaded
2015-09-29T09:30:23.601Z,1443519023.601 [ComponentRegistry](DEBUG): SyncComponent "SpeedCalculator" handled in the control thread.
2015-09-29T09:30:23.619Z,1443519023.619 [TempGradientCalculator] Loaded
2015-09-29T09:30:23.619Z,1443519023.619 [ComponentRegistry](DEBUG): SyncComponent "TempGradientCalculator" handled in the control thread.
2015-09-29T09:30:23.640Z,1443519023.640 [VerticalTemperatureHomogeneityIndexCalculator] Loaded
2015-09-29T09:30:23.640Z,1443519023.640 [ComponentRegistry](DEBUG): SyncComponent "VerticalTemperatureHomogeneityIndexCalculator" handled in the control thread.
2015-09-29T09:30:23.646Z,1443519023.646 [YawRateCalculator] Loaded
2015-09-29T09:30:23.646Z,1443519023.646 [ComponentRegistry](DEBUG): SyncComponent "YawRateCalculator" handled in the control thread.
2015-09-29T09:30:23.646Z,1443519023.646 [Module Loader](DEBUG): Loaded Module: Derivation (Contains the base derivation components)
2015-09-29T09:30:23.647Z,1443519023.647 [Module Loader](DEBUG): Loading Module at Modules/Estimation.so
2015-09-29T09:30:23.763Z,1443519023.763 [StratificationFrontDetector](INFO): threshold set to: 0.399988 degC
2015-09-29T09:30:23.764Z,1443519023.764 [StratificationFrontDetector](DEBUG): (re)initializing
2015-09-29T09:30:23.764Z,1443519023.764 [StratificationFrontDetector] Loaded
2015-09-29T09:30:23.764Z,1443519023.764 [ComponentRegistry](DEBUG): SyncComponent "StratificationFrontDetector" handled in the control thread.
2015-09-29T09:30:23.765Z,1443519023.765 [Module Loader](DEBUG): Loaded Module: Estimation (Contains the base estimation components)
2015-09-29T09:30:23.765Z,1443519023.765 [Module Loader](DEBUG): Loading Module at Modules/Guidance.so
2015-09-29T09:30:24.051Z,1443519024.051 [Module Loader](DEBUG): Loaded Module: Guidance (Contains behaviors and commands)
2015-09-29T09:30:24.051Z,1443519024.051 [Module Loader](DEBUG): Loading Module at Modules/Navigation.so
2015-09-29T09:30:24.180Z,1443519024.180 [DeadReckonUsingMultipleVelocitySources] Loaded
2015-09-29T09:30:24.181Z,1443519024.181 [ComponentRegistry](DEBUG): SyncComponent "DeadReckonUsingMultipleVelocitySources" handled in the control thread.
2015-09-29T09:30:24.245Z,1443519024.245 [DeadReckonUsingSpeedCalculator] Loaded
2015-09-29T09:30:24.245Z,1443519024.245 [ComponentRegistry](DEBUG): SyncComponent "DeadReckonUsingSpeedCalculator" handled in the control thread.
2015-09-29T09:30:24.267Z,1443519024.267 [NavChart] Loaded
2015-09-29T09:30:24.268Z,1443519024.268 [ComponentRegistry](DEBUG): SyncComponent "NavChart" handled in the control thread.
2015-09-29T09:30:24.273Z,1443519024.273 [UniversalFixResidualReporter] Loaded
2015-09-29T09:30:24.273Z,1443519024.273 [ComponentRegistry](DEBUG): SyncComponent "UniversalFixResidualReporter" handled in the control thread.
2015-09-29T09:30:24.273Z,1443519024.273 [Module Loader](DEBUG): Loaded Module: Navigation (Contains the base navigation components)
2015-09-29T09:30:24.274Z,1443519024.274 [Module Loader](DEBUG): Loading Module at Modules/Sample.so
2015-09-29T09:30:24.283Z,1443519024.283 [Module Loader](DEBUG): Loaded Module: Sample (This is a Sample Module of Sample Components)
2015-09-29T09:30:24.283Z,1443519024.283 [Module Loader](DEBUG): Loading Module at Modules/Science.so
2015-09-29T09:30:24.584Z,1443519024.584 [CTD_NeilBrown] Loaded
2015-09-29T09:30:24.585Z,1443519024.585 [ComponentRegistry](DEBUG): Component "CTD_NeilBrown" handled in its own thread.
2015-09-29T09:30:24.587Z,1443519024.587 [CTD_NeilBrown ThreadHandler](DEBUG): Created PCaller Thread at 4059D4E0
2015-09-29T09:30:24.588Z,1443519024.588 [CTD_NeilBrown ThreadHandler](INFO): Protected caller Thread ID is 810
2015-09-29T09:30:24.601Z,1443519024.601 [ISUS] Loaded
2015-09-29T09:30:24.601Z,1443519024.601 [ComponentRegistry](DEBUG): SyncComponent "ISUS" handled in the control thread.
2015-09-29T09:30:24.615Z,1443519024.615 [PAR_Licor] Loaded
2015-09-29T09:30:24.616Z,1443519024.616 [ComponentRegistry](DEBUG): SyncComponent "PAR_Licor" handled in the control thread.
2015-09-29T09:30:24.676Z,1443519024.676 [WetLabsBB2FL] Loaded
2015-09-29T09:30:24.676Z,1443519024.676 [ComponentRegistry](DEBUG): Component "WetLabsBB2FL" handled in its own thread.
2015-09-29T09:30:24.679Z,1443519024.679 [WetLabsBB2FL ThreadHandler](DEBUG): Created PCaller Thread at 405CD4E0
2015-09-29T09:30:24.680Z,1443519024.680 [WetLabsBB2FL ThreadHandler](INFO): Protected caller Thread ID is 811
2015-09-29T09:30:24.680Z,1443519024.680 [Module Loader](DEBUG): Loaded Module: Science (Contains the science components)
2015-09-29T09:30:24.681Z,1443519024.681 [Module Loader](DEBUG): Loading Module at Modules/Sensor.so
2015-09-29T09:30:25.405Z,1443519025.405 [AHRS_sp3003D] Loaded
2015-09-29T09:30:25.405Z,1443519025.405 [ComponentRegistry](DEBUG): SyncComponent "AHRS_sp3003D" handled in the control thread.
2015-09-29T09:30:25.598Z,1443519025.598 [DataOverHttps] Loaded
2015-09-29T09:30:25.599Z,1443519025.599 [ComponentRegistry](DEBUG): SyncComponent "DataOverHttps" handled in the control thread.
2015-09-29T09:30:25.612Z,1443519025.612 [Depth_Keller] Loaded
2015-09-29T09:30:25.613Z,1443519025.613 [ComponentRegistry](DEBUG): SyncComponent "Depth_Keller" handled in the control thread.
2015-09-29T09:30:25.618Z,1443519025.618 [DropWeight] Loaded
2015-09-29T09:30:25.618Z,1443519025.618 [ComponentRegistry](DEBUG): SyncComponent "DropWeight" handled in the control thread.
2015-09-29T09:30:25.774Z,1443519025.774 [DVL_micro] Loaded
2015-09-29T09:30:25.774Z,1443519025.774 [ComponentRegistry](DEBUG): SyncComponent "DVL_micro" handled in the control thread.
2015-09-29T09:30:25.878Z,1443519025.878 [NAL9602] Loaded
2015-09-29T09:30:25.878Z,1443519025.878 [ComponentRegistry](DEBUG): SyncComponent "NAL9602" handled in the control thread.
2015-09-29T09:30:25.929Z,1443519025.929 [Onboard] Loaded
2015-09-29T09:30:25.929Z,1443519025.929 [ComponentRegistry](DEBUG): SyncComponent "Onboard" handled in the control thread.
2015-09-29T09:30:25.941Z,1443519025.941 [Radio_Surface] Loaded
2015-09-29T09:30:25.941Z,1443519025.941 [ComponentRegistry](DEBUG): Component "Radio_Surface" handled in its own thread.
2015-09-29T09:30:25.943Z,1443519025.943 [Radio_Surface ThreadHandler](DEBUG): Created PCaller Thread at 408114E0
2015-09-29T09:30:25.944Z,1443519025.944 [Radio_Surface ThreadHandler](INFO): Protected caller Thread ID is 812
2015-09-29T09:30:26.103Z,1443519026.103 [DAT] Loaded
2015-09-29T09:30:26.104Z,1443519026.104 [ComponentRegistry](DEBUG): SyncComponent "DAT" handled in the control thread.
2015-09-29T09:30:26.110Z,1443519026.110 [SCPI] Loaded
2015-09-29T09:30:26.111Z,1443519026.111 [ComponentRegistry](DEBUG): SyncComponent "SCPI" handled in the control thread.
2015-09-29T09:30:26.111Z,1443519026.111 [Module Loader](DEBUG): Loaded Module: Sensor (Contains the sensor components)
2015-09-29T09:30:26.112Z,1443519026.112 [Module Loader](DEBUG): Loading Module at Modules/Servo.so
2015-09-29T09:30:26.241Z,1443519026.241 [BuoyancyServo] Loaded
2015-09-29T09:30:26.242Z,1443519026.242 [ComponentRegistry](DEBUG): SyncComponent "BuoyancyServo" handled in the control thread.
2015-09-29T09:30:26.258Z,1443519026.258 [ElevatorServo] Loaded
2015-09-29T09:30:26.259Z,1443519026.259 [ComponentRegistry](DEBUG): SyncComponent "ElevatorServo" handled in the control thread.
2015-09-29T09:30:26.270Z,1443519026.270 [MassServo] Loaded
2015-09-29T09:30:26.271Z,1443519026.271 [ComponentRegistry](DEBUG): SyncComponent "MassServo" handled in the control thread.
2015-09-29T09:30:26.283Z,1443519026.283 [RudderServo] Loaded
2015-09-29T09:30:26.283Z,1443519026.283 [ComponentRegistry](DEBUG): SyncComponent "RudderServo" handled in the control thread.
2015-09-29T09:30:26.299Z,1443519026.299 [ThrusterServo] Loaded
2015-09-29T09:30:26.299Z,1443519026.299 [ComponentRegistry](DEBUG): SyncComponent "ThrusterServo" handled in the control thread.
2015-09-29T09:30:26.299Z,1443519026.299 [Module Loader](DEBUG): Loaded Module: Servo (This is the module containing motor controllers)
2015-09-29T09:30:26.300Z,1443519026.300 [Module Loader](DEBUG): Loading Module at Modules/Simulator.so
2015-09-29T09:30:26.498Z,1443519026.498 [InternalSim] Loaded
2015-09-29T09:30:26.498Z,1443519026.498 [ComponentRegistry](DEBUG): SyncComponent "InternalSim" handled in the control thread.
2015-09-29T09:30:26.499Z,1443519026.499 [Module Loader](DEBUG): Loaded Module: Simulator (This is the module containing the Simulator)
2015-09-29T09:30:26.499Z,1443519026.499 [Module Loader](DEBUG): Loading Module at Modules/Trigger.so
2015-09-29T09:30:26.542Z,1443519026.542 [Module Loader](DEBUG): Loaded Module: Trigger (Contains triggers for use in missions)
2015-09-29T09:30:26.546Z,1443519026.546 [ComponentRegistry](DEBUG): SyncComponent "MissionManager" handled in the control thread.
2015-09-29T09:30:26.547Z,1443519026.547 [ComponentRegistry](DEBUG): SyncComponent "Reporter" handled in the control thread.
2015-09-29T09:30:26.554Z,1443519026.554 [ComponentRegistry](DEBUG): Component "NavChartDb" handled in its own thread.
2015-09-29T09:30:26.555Z,1443519026.555 [NavChartDb ThreadHandler](DEBUG): Created PCaller Thread at 408BF4E0
2015-09-29T09:30:26.556Z,1443519026.556 [NavChartDb ThreadHandler](INFO): Protected caller Thread ID is 813
2015-09-29T09:30:26.561Z,1443519026.561 [Supervisor](INFO): Main Thread ID is 760
2015-09-29T09:30:26.561Z,1443519026.561 [Supervisor](DEBUG): Running supervisor.
2015-09-29T09:30:26.561Z,1443519026.561 [CommandLine ThreadHandler](INFO): Handler Thread ID is 814
2015-09-29T09:30:26.568Z,1443519026.568 [controlThread ThreadHandler](INFO): Handler Thread ID is 815
2015-09-29T09:30:26.568Z,1443519026.568 [controlThread](DEBUG): Initializing ControlThread
2015-09-29T09:30:26.569Z,1443519026.569 [VerticalControl](DEBUG): Initialize VerticalControlComponent.
2015-09-29T09:30:26.571Z,1443519026.571 [HorizontalControl](DEBUG): Initialize HorizontalControlComponent.
2015-09-29T09:30:26.572Z,1443519026.572 [SpeedControl](DEBUG): Initialize SpeedControlComponent.
2015-09-29T09:30:26.572Z,1443519026.572 [LoopControl](DEBUG): Initialize LoopControlComponent.
2015-09-29T09:30:26.573Z,1443519026.573 [SBIT](INFO): Initialize SBIT Component.
2015-09-29T09:30:26.573Z,1443519026.573 [SBIT](IMPORTANT): Tethys CM Info: SVN revision:12634
2015-09-29T09:30:26.575Z,1443519026.575 [SBIT](INFO): Kernel Reporting Different Release From Configuration.
Kernel Expected: 2.6.32-45-generic-pae
Kernel Reported: 2.6.27.8
2015-09-29T09:30:26.575Z,1443519026.575 [SBIT](INFO): Kernel Reporting Different Version From Configuration.
Kernel Expected: #102-Ubuntu SMP Wed Jan 2 22:10:16 UTC 2013
Kernel Reported: #641 PREEMPT Mon Sep 28 16:45:10 PDT 2015
2015-09-29T09:30:26.576Z,1443519026.576 [SBIT](INFO): Beginning SBIT in 20.000000 seconds.
2015-09-29T09:30:26.576Z,1443519026.576 [IBIT](INFO): Initialize IBIT Component.
2015-09-29T09:30:26.577Z,1443519026.577 [CBIT](DEBUG): Initialize CBIT Component.
2015-09-29T09:30:26.577Z,1443519026.577 [CBIT](FAULT): LAST RESTART WAS UNINTENTIONAL.
2015-09-29T09:30:26.578Z,1443519026.578 [CBIT](INFO): Last reboot was NOT due to watchdog timer.
2015-09-29T09:30:26.578Z,1443519026.578 [DepthRateCalculator](DEBUG): Initializing DepthRateCalculator.
2015-09-29T09:30:26.578Z,1443519026.578 [PitchRateCalculator](DEBUG): Initializing PitchRateCalculator.
2015-09-29T09:30:26.578Z,1443519026.578 [SpeedCalculator](DEBUG): Initializing SpeedCalculator.
2015-09-29T09:30:26.579Z,1443519026.579 [TempGradientCalculator](DEBUG): Initializing TempGradientCalculator.
2015-09-29T09:30:26.579Z,1443519026.579 [VerticalTemperatureHomogeneityIndexCalculator](DEBUG): (re)initializing
2015-09-29T09:30:26.580Z,1443519026.580 [YawRateCalculator](DEBUG): Initializing YawRateCalculator.
2015-09-29T09:30:26.581Z,1443519026.581 [DeadReckonUsingMultipleVelocitySources](DEBUG): Initializing DeadReckonUsingMultipleVelocitySources component.
2015-09-29T09:30:26.581Z,1443519026.581 [DeadReckonUsingMultipleVelocitySources](INFO): Will consider orientation measurement stale after 120s.
2015-09-29T09:30:26.582Z,1443519026.582 [DeadReckonUsingMultipleVelocitySources](INFO): Will consider velocity measurement stale after 20s.
2015-09-29T09:30:26.582Z,1443519026.582 [DeadReckonUsingSpeedCalculator](DEBUG): Initializing DeadReckonUsingSpeedCalculator component.
2015-09-29T09:30:26.582Z,1443519026.582 [DeadReckonUsingSpeedCalculator](INFO): Will consider orientation measurement stale after 120s.
2015-09-29T09:30:26.583Z,1443519026.583 [DeadReckonUsingSpeedCalculator](INFO): Will consider velocity measurement stale after 20s.
2015-09-29T09:30:26.583Z,1443519026.583 [NavChart](DEBUG): Initialize NavChart Navigation.
2015-09-29T09:30:26.584Z,1443519026.584 [UniversalFixResidualReporter](DEBUG): Initializing UniversalFixResidualReporter component.
2015-09-29T09:30:26.589Z,1443519026.589 [InternalSim](DEBUG):  InternalSim initializing...
2015-09-29T09:30:26.620Z,1443519026.620 [logger ThreadHandler](INFO): Handler Thread ID is 816
2015-09-29T09:30:26.732Z,1443519026.732 [CTD_NeilBrown ThreadHandler](INFO): Handler Thread ID is 817
2015-09-29T09:30:26.791Z,1443519026.791 [WetLabsBB2FL ThreadHandler](INFO): Handler Thread ID is 818
2015-09-29T09:30:26.795Z,1443519026.795 [MissionManager](INFO): Loading Mission: Missions/Startup.xml
2015-09-29T09:30:26.815Z,1443519026.815 [Radio_Surface ThreadHandler](INFO): Handler Thread ID is 819
2015-09-29T09:30:26.836Z,1443519026.836 [NavChartDb ThreadHandler](INFO): Handler Thread ID is 820
2015-09-29T09:30:26.845Z,1443519026.845 [NavChartDb](INFO): Looking for Electronic Nav Chart files in directory: Resources
2015-09-29T09:30:26.847Z,1443519026.847 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US1WC07M.000
2015-09-29T09:30:26.847Z,1443519026.847 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US2WC11M.000
2015-09-29T09:30:26.847Z,1443519026.847 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US3CA52M.000
2015-09-29T09:30:26.847Z,1443519026.847 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US4CA60M.000
2015-09-29T09:30:26.848Z,1443519026.848 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA50M.000
2015-09-29T09:30:26.848Z,1443519026.848 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA61M.000
2015-09-29T09:30:26.848Z,1443519026.848 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA62M.000
2015-09-29T09:30:26.848Z,1443519026.848 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA83M.000
2015-09-29T09:30:26.881Z,1443519026.881 [Startup:A.GoToSurface](DEBUG): Construct GoToSurface.
2015-09-29T09:30:26.929Z,1443519026.929 [MissionManager](DEBUG): 
<?xml version="1.0" encoding="UTF-8"?>
<Mission xmlns="Tethys"
       xmlns:Control="Tethys/Control"
       xmlns:Guidance="Tethys/Guidance" 
       xmlns:Units="Tethys/Units"
       xmlns:Universal="Tethys/Universal"
       xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
       xsi:schemaLocation="Tethys http://okeanids.mbari.org/tethys/Xml/Tethys.xsd
                           Tethys/Control http://okeanids.mbari.org/tethys/Xml/Control.xsd
                           Tethys/Guidance http://okeanids.mbari.org/tethys/Xml/Guidance.xsd
                           Tethys/Units http://okeanids.mbari.org/tethys/Xml/Units.xsd
                           Tethys/Universal http://okeanids.mbari.org/tethys/Xml/Universal.xsd"
       Id="Startup">

    <Guidance:GoToSurface>
        <Progression/>
    </Guidance:GoToSurface>

    <Aggregate Id="StartupSatComms">

        <Sequence/>

        <ReadDatum>
            <Timeout Duration="P1M" />
            <Universal:latitude_fix/>
        </ReadDatum>

        <ReadDatum>
            <Timeout Duration="P1M" />
            <Universal:platform_communications/>
        </ReadDatum>

    </Aggregate>

</Mission>


2015-09-29T09:30:26.930Z,1443519026.930 [MissionManager](INFO): Loading Mission: Missions/Default.xml
2015-09-29T09:30:26.991Z,1443519026.991 [MissionManager](INFO): DefineArg Default.ElapsedSinceDefaultStarted = 0.000000 min
2015-09-29T09:30:27.008Z,1443519027.008 [Default:A.GoToSurface](DEBUG): Construct GoToSurface.
2015-09-29T09:30:27.034Z,1443519027.034 [Default:CheckIn:Read_Iridium:A_Timeout:A.Execute](DEBUG): Construct Execute.
2015-09-29T09:30:27.037Z,1443519027.037 [Default:CheckIn:C.Wait](DEBUG): Construct Wait.
2015-09-29T09:30:27.059Z,1443519027.059 [Default:D.Execute](DEBUG): Construct Execute.
2015-09-29T09:30:27.062Z,1443519027.062 [MissionManager](DEBUG): 
<?xml version="1.0" encoding="UTF-8"?>
<Mission xmlns="Tethys"
xmlns:Guidance="Tethys/Guidance"
xmlns:Units="Tethys/Units"
xmlns:Universal="Tethys/Universal"
xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
xsi:schemaLocation="Tethys http://okeanids.mbari.org/tethys/Xml/Tethys.xsd
Tethys/Guidance http://okeanids.mbari.org/tethys/Xml/Guidance.xsd
Tethys/Units http://okeanids.mbari.org/tethys/Xml/Units.xsd
Tethys/Universal http://okeanids.mbari.org/tethys/Xml/Universal.xsd"
Id="Default">

    <DefineArg Name="ElapsedSinceDefaultStarted"><Units:minute/><Value>0</Value></DefineArg>

    <Guidance:GoToSurface>
        <Progression/>
    </Guidance:GoToSurface>

    <Aggregate Id="CheckIn">

        <Sequence Repeat="288"/>

        <ReadDatum Id="Read_GPS">
            <Sequence/>
            <Timeout Duration="P5M"/>
            <Universal:time_fix/>
        </ReadDatum>

        <ReadDatum Id="Read_Iridium">
            <Sequence/>
            <Timeout Duration="P2H">
                <Guidance:Execute>
                    <Sequence/>
                    <Setting><Guidance:Execute.command/><String>Burn 300</String></Setting>
                </Guidance:Execute>
                <Syslog Severity="Critical">Dropped weight due to communications timeout.</Syslog>
            </Timeout>
            <Universal:platform_communications/>
        </ReadDatum>

        <Guidance:Wait>
            <Sequence/>
            <Setting><Guidance:Wait.duration/><Units:minute/><Value>5</Value></Setting>
        </Guidance:Wait>

        <Assign><Sequence/><Arg Name="ElapsedSinceDefaultStarted"/><Elapsed><Universal:mission_started/></Elapsed></Assign>

        <Syslog Severity="Important">Default mission has been running for <Arg Name="ElapsedSinceDefaultStarted"/><Units:minute/></Syslog>

    </Aggregate>

    <Syslog Severity="Important">Restarting logs and Default mission.</Syslog>

    <Guidance:Execute>
        <Sequence/>
        <Setting><Guidance:Execute.command/><String>restart logs</String></Setting>
    </Guidance:Execute>

</Mission>


2015-09-29T09:30:27.084Z,1443519027.084 [controlThread](DEBUG): Component order: CycleStarter,InternalSim,ISUS,PAR_Licor,AHRS_sp3003D,DataOverHttps,Depth_Keller,DropWeight,DVL_micro,NAL9602,Onboard,DAT,SCPI,PAR_Licor,Depth_Keller,DepthRateCalculator,PitchRateCalculator,SpeedCalculator,TempGradientCalculator,VerticalTemperatureHomogeneityIndexCalculator,YawRateCalculator,StratificationFrontDetector,DeadReckonUsingMultipleVelocitySources,DeadReckonUsingSpeedCalculator,NavChart,UniversalFixResidualReporter,MissionManager,VerticalControl,HorizontalControl,SpeedControl,LoopControl,BuoyancyServo,ElevatorServo,MassServo,RudderServo,ThrusterServo,SBIT,IBIT,CBIT,Reporter,LogSplitter,
2015-09-29T09:30:27.319Z,1443519027.319 [DVL_micro](INFO): Initializing
2015-09-29T09:30:27.508Z,1443519027.508 [DeadReckonUsingMultipleVelocitySources](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T09:30:27.519Z,1443519027.519 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T09:30:27.635Z,1443519027.635 [BuoyancyServo](DEBUG): Initializing BuoyancyServo.
2015-09-29T09:30:27.650Z,1443519027.650 [ElevatorServo](DEBUG): Initializing ElevatorServo.
2015-09-29T09:30:27.659Z,1443519027.659 [MassServo](DEBUG): Initializing MassServo.
2015-09-29T09:30:27.669Z,1443519027.669 [RudderServo](DEBUG): Initializing RudderServo.
2015-09-29T09:30:27.691Z,1443519027.691 [ThrusterServo](DEBUG): Initializing ThrusterServo.
2015-09-29T09:30:27.941Z,1443519027.941 [DeadReckonUsingMultipleVelocitySources](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T09:30:27.942Z,1443519027.942 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T09:30:37.051Z,1443519037.051 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T09:30:37.410Z,1443519037.410 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T09:30:37.548Z,1443519037.548 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T09:30:37.946Z,1443519037.946 [DataOverHttps](INFO): setting available, lastComms_.elapsed()=0.003100
2015-09-29T09:30:37.950Z,1443519037.950 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T09:30:38.345Z,1443519038.345 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T09:30:38.744Z,1443519038.744 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T09:30:39.144Z,1443519039.144 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T09:30:39.544Z,1443519039.544 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T09:30:39.944Z,1443519039.944 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T09:30:40.344Z,1443519040.344 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T09:30:40.744Z,1443519040.744 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T09:30:41.144Z,1443519041.144 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T09:30:41.552Z,1443519041.552 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T09:30:41.945Z,1443519041.945 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T09:30:42.344Z,1443519042.344 [NAL9602](INFO): No messages in MT queue
2015-09-29T09:30:42.345Z,1443519042.345 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T09:30:42.744Z,1443519042.744 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T09:30:43.144Z,1443519043.144 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T09:30:43.544Z,1443519043.544 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T09:30:43.944Z,1443519043.944 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T09:30:44.344Z,1443519044.344 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T09:30:44.752Z,1443519044.752 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T09:30:45.152Z,1443519045.152 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T09:30:45.545Z,1443519045.545 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T09:30:45.944Z,1443519045.944 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T09:30:46.344Z,1443519046.344 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T09:30:46.744Z,1443519046.744 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T09:30:47.149Z,1443519047.149 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T09:30:47.164Z,1443519047.164 [SBIT](IMPORTANT): Beginning Startup BIT
2015-09-29T09:30:47.549Z,1443519047.549 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T09:30:47.949Z,1443519047.949 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T09:30:48.346Z,1443519048.346 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T09:30:48.749Z,1443519048.749 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T09:30:49.147Z,1443519049.147 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T09:30:49.547Z,1443519049.547 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T09:30:49.947Z,1443519049.947 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T09:30:50.351Z,1443519050.351 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T09:30:50.749Z,1443519050.749 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T09:30:51.146Z,1443519051.146 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T09:30:51.549Z,1443519051.549 [D