2015-09-29T08:50:46.935Z,1443516646.935 [Supervisor](DEBUG): Initializing supervisor.
2015-09-29T08:50:46.938Z,1443516646.938 [SyncHandler](DEBUG): Created PCaller Thread at 4034C4E0
2015-09-29T08:50:46.939Z,1443516646.939 [SyncHandler](INFO): Protected caller Thread ID is 762
2015-09-29T08:50:46.939Z,1443516646.939 [ComponentRegistry](DEBUG): Component "controlThread" handled in its own thread.
2015-09-29T08:50:46.942Z,1443516646.942 [controlThread ThreadHandler](DEBUG): Created PCaller Thread at 4037C4E0
2015-09-29T08:50:46.943Z,1443516646.943 [controlThread ThreadHandler](INFO): Protected caller Thread ID is 763
2015-09-29T08:50:46.945Z,1443516646.945 [ComponentRegistry](DEBUG): SyncComponent "CycleStarter" handled in the control thread.
2015-09-29T08:50:46.958Z,1443516646.958 [ComponentRegistry](DEBUG): Component "CommandLine" handled in its own thread.
2015-09-29T08:50:46.962Z,1443516646.962 [CommandLine ThreadHandler](DEBUG): Created PCaller Thread at 403AC4E0
2015-09-29T08:50:46.963Z,1443516646.963 [CommandLine ThreadHandler](INFO): Protected caller Thread ID is 764
2015-09-29T08:50:46.963Z,1443516646.963 [ComponentRegistry](DEBUG): Component "logger" handled in its own thread.
2015-09-29T08:50:46.966Z,1443516646.966 [logger ThreadHandler](DEBUG): Created PCaller Thread at 403DC4E0
2015-09-29T08:50:46.967Z,1443516646.967 [logger ThreadHandler](INFO): Protected caller Thread ID is 765
2015-09-29T08:50:46.969Z,1443516646.969 [ComponentRegistry](DEBUG): SyncComponent "LogSplitter" handled in the control thread.
2015-09-29T08:50:46.969Z,1443516646.969 [Supervisor](INFO): Looking for Config files in directory: Config/
2015-09-29T08:50:46.973Z,1443516646.973 [Supervisor](INFO): Opening Config file at: Config/Control.cfg
2015-09-29T08:50:47.364Z,1443516647.364 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Control
2015-09-29T08:50:47.366Z,1443516647.366 [Supervisor](INFO): Opening Config file at: Config/BIT.cfg
2015-09-29T08:50:47.558Z,1443516647.558 [ComponentRegistry](DEBUG): Loaded Config Component "Config/BIT
2015-09-29T08:50:47.560Z,1443516647.560 [Supervisor](INFO): Opening Config file at: Config/Derivation.cfg
2015-09-29T08:50:47.703Z,1443516647.703 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Derivation
2015-09-29T08:50:47.704Z,1443516647.704 [Supervisor](INFO): Opening Config file at: Config/Estimation.cfg
2015-09-29T08:50:47.851Z,1443516647.851 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Estimation
2015-09-29T08:50:47.852Z,1443516647.852 [Supervisor](INFO): Opening Config file at: Config/Guidance.cfg
2015-09-29T08:50:47.946Z,1443516647.946 [Supervisor](INFO): Opening Config file at: Config/Navigation.cfg
2015-09-29T08:50:48.167Z,1443516648.167 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Navigation
2015-09-29T08:50:48.168Z,1443516648.168 [Supervisor](INFO): Opening Config file at: Config/Sample.cfg
2015-09-29T08:50:48.265Z,1443516648.265 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Sample
2015-09-29T08:50:48.266Z,1443516648.266 [Supervisor](INFO): Opening Config file at: Config/Science.cfg
2015-09-29T08:50:48.579Z,1443516648.579 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Science
2015-09-29T08:50:48.580Z,1443516648.580 [Supervisor](INFO): Opening Config file at: Config/Sensor.cfg
2015-09-29T08:50:48.979Z,1443516648.979 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Sensor
2015-09-29T08:50:48.980Z,1443516648.980 [Supervisor](INFO): Opening Config file at: Config/Servo.cfg
2015-09-29T08:50:49.331Z,1443516649.331 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Servo
2015-09-29T08:50:49.333Z,1443516649.333 [Supervisor](INFO): Opening Config file at: Config/Simulator.cfg
2015-09-29T08:50:49.928Z,1443516649.928 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Simulator
2015-09-29T08:50:49.929Z,1443516649.929 [Supervisor](INFO): Opening Config file at: Config/logger.cfg
2015-09-29T08:50:50.158Z,1443516650.158 [ComponentRegistry](DEBUG): Loaded Config Component "Config/logger
2015-09-29T08:50:50.158Z,1443516650.158 [Supervisor](INFO): Opening Config file at: Config/secure.cfg
2015-09-29T08:50:50.278Z,1443516650.278 [ComponentRegistry](DEBUG): Loaded Config Component "Config/secure
2015-09-29T08:50:50.278Z,1443516650.278 [Supervisor](INFO): Opening Config file at: Config/vehicle.cfg
2015-09-29T08:50:50.795Z,1443516650.795 [ComponentRegistry](DEBUG): Loaded Config Component "Config/vehicle
2015-09-29T08:50:50.795Z,1443516650.795 [Supervisor](INFO): Opening Config file at: Config/workSite.cfg
2015-09-29T08:50:50.970Z,1443516650.970 [ComponentRegistry](DEBUG): Loaded Config Component "Config/workSite
2015-09-29T08:50:50.972Z,1443516650.972 [Supervisor](INFO): Looking for Config files in directory: Config/(none)/
2015-09-29T08:50:50.972Z,1443516650.972 [Supervisor](FAULT): Ignoring configuration overrides from Data/persisted.cfg
2015-09-29T08:50:50.977Z,1443516650.977 [Module Loader](DEBUG): Loading Module at Modules/Control.so
2015-09-29T08:50:51.051Z,1443516651.051 [VerticalControl](DEBUG): Construct VerticalControl.
2015-09-29T08:50:51.186Z,1443516651.186 [VerticalControl] Loaded
2015-09-29T08:50:51.186Z,1443516651.186 [ComponentRegistry](DEBUG): SyncComponent "VerticalControl" handled in the control thread.
2015-09-29T08:50:51.187Z,1443516651.187 [HorizontalControl](DEBUG): Construct HorizontalControl.
2015-09-29T08:50:51.268Z,1443516651.268 [HorizontalControl] Loaded
2015-09-29T08:50:51.268Z,1443516651.268 [ComponentRegistry](DEBUG): SyncComponent "HorizontalControl" handled in the control thread.
2015-09-29T08:50:51.269Z,1443516651.269 [SpeedControl](DEBUG): Construct SpeedControl.
2015-09-29T08:50:51.275Z,1443516651.275 [SpeedControl] Loaded
2015-09-29T08:50:51.276Z,1443516651.276 [ComponentRegistry](DEBUG): SyncComponent "SpeedControl" handled in the control thread.
2015-09-29T08:50:51.276Z,1443516651.276 [LoopControl](DEBUG): Construct LoopControl.
2015-09-29T08:50:51.277Z,1443516651.277 [LoopControl] Loaded
2015-09-29T08:50:51.277Z,1443516651.277 [ComponentRegistry](DEBUG): SyncComponent "LoopControl" handled in the control thread.
2015-09-29T08:50:51.277Z,1443516651.277 [Module Loader](DEBUG): Loaded Module: Control (Contains the Control components, such as Depth, Heading, and Speed Control)
2015-09-29T08:50:51.282Z,1443516651.282 [Module Loader](DEBUG): Loading Module at Modules/BIT.so
2015-09-29T08:50:51.446Z,1443516651.446 [SBIT](DEBUG): Construct Startup Built In Test.
2015-09-29T08:50:51.458Z,1443516651.458 [SBIT] Loaded
2015-09-29T08:50:51.459Z,1443516651.459 [ComponentRegistry](DEBUG): SyncComponent "SBIT" handled in the control thread.
2015-09-29T08:50:51.460Z,1443516651.460 [IBIT](DEBUG): Construct Initiated Built In Test.
2015-09-29T08:50:51.493Z,1443516651.493 [IBIT] Loaded
2015-09-29T08:50:51.494Z,1443516651.494 [ComponentRegistry](DEBUG): SyncComponent "IBIT" handled in the control thread.
2015-09-29T08:50:51.496Z,1443516651.496 [CBIT](DEBUG): Construct Continuous Built In Test.
2015-09-29T08:50:51.652Z,1443516651.652 [CBIT] Loaded
2015-09-29T08:50:51.652Z,1443516651.652 [ComponentRegistry](DEBUG): SyncComponent "CBIT" handled in the control thread.
2015-09-29T08:50:51.652Z,1443516651.652 [Module Loader](DEBUG): Loaded Module: BIT (Contains the BuiltInTest components, such as C Built In Test)
2015-09-29T08:50:51.653Z,1443516651.653 [Module Loader](DEBUG): Loading Module at Modules/Derivation.so
2015-09-29T08:50:51.691Z,1443516651.691 [DepthRateCalculator] Loaded
2015-09-29T08:50:51.691Z,1443516651.691 [ComponentRegistry](DEBUG): SyncComponent "DepthRateCalculator" handled in the control thread.
2015-09-29T08:50:51.701Z,1443516651.701 [PitchRateCalculator] Loaded
2015-09-29T08:50:51.701Z,1443516651.701 [ComponentRegistry](DEBUG): SyncComponent "PitchRateCalculator" handled in the control thread.
2015-09-29T08:50:51.713Z,1443516651.713 [SpeedCalculator] Loaded
2015-09-29T08:50:51.713Z,1443516651.713 [ComponentRegistry](DEBUG): SyncComponent "SpeedCalculator" handled in the control thread.
2015-09-29T08:50:51.730Z,1443516651.730 [TempGradientCalculator] Loaded
2015-09-29T08:50:51.730Z,1443516651.730 [ComponentRegistry](DEBUG): SyncComponent "TempGradientCalculator" handled in the control thread.
2015-09-29T08:50:51.752Z,1443516651.752 [VerticalTemperatureHomogeneityIndexCalculator] Loaded
2015-09-29T08:50:51.752Z,1443516651.752 [ComponentRegistry](DEBUG): SyncComponent "VerticalTemperatureHomogeneityIndexCalculator" handled in the control thread.
2015-09-29T08:50:51.757Z,1443516651.757 [YawRateCalculator] Loaded
2015-09-29T08:50:51.758Z,1443516651.758 [ComponentRegistry](DEBUG): SyncComponent "YawRateCalculator" handled in the control thread.
2015-09-29T08:50:51.758Z,1443516651.758 [Module Loader](DEBUG): Loaded Module: Derivation (Contains the base derivation components)
2015-09-29T08:50:51.759Z,1443516651.759 [Module Loader](DEBUG): Loading Module at Modules/Estimation.so
2015-09-29T08:50:51.881Z,1443516651.881 [StratificationFrontDetector](INFO): threshold set to: 0.399988 degC
2015-09-29T08:50:51.881Z,1443516651.881 [StratificationFrontDetector](DEBUG): (re)initializing
2015-09-29T08:50:51.881Z,1443516651.881 [StratificationFrontDetector] Loaded
2015-09-29T08:50:51.882Z,1443516651.882 [ComponentRegistry](DEBUG): SyncComponent "StratificationFrontDetector" handled in the control thread.
2015-09-29T08:50:51.882Z,1443516651.882 [Module Loader](DEBUG): Loaded Module: Estimation (Contains the base estimation components)
2015-09-29T08:50:51.883Z,1443516651.883 [Module Loader](DEBUG): Loading Module at Modules/Guidance.so
2015-09-29T08:50:52.184Z,1443516652.184 [Module Loader](DEBUG): Loaded Module: Guidance (Contains behaviors and commands)
2015-09-29T08:50:52.185Z,1443516652.185 [Module Loader](DEBUG): Loading Module at Modules/Navigation.so
2015-09-29T08:50:52.319Z,1443516652.319 [DeadReckonUsingMultipleVelocitySources] Loaded
2015-09-29T08:50:52.319Z,1443516652.319 [ComponentRegistry](DEBUG): SyncComponent "DeadReckonUsingMultipleVelocitySources" handled in the control thread.
2015-09-29T08:50:52.380Z,1443516652.380 [DeadReckonUsingSpeedCalculator] Loaded
2015-09-29T08:50:52.380Z,1443516652.380 [ComponentRegistry](DEBUG): SyncComponent "DeadReckonUsingSpeedCalculator" handled in the control thread.
2015-09-29T08:50:52.402Z,1443516652.402 [NavChart] Loaded
2015-09-29T08:50:52.403Z,1443516652.403 [ComponentRegistry](DEBUG): SyncComponent "NavChart" handled in the control thread.
2015-09-29T08:50:52.408Z,1443516652.408 [UniversalFixResidualReporter] Loaded
2015-09-29T08:50:52.408Z,1443516652.408 [ComponentRegistry](DEBUG): SyncComponent "UniversalFixResidualReporter" handled in the control thread.
2015-09-29T08:50:52.409Z,1443516652.409 [Module Loader](DEBUG): Loaded Module: Navigation (Contains the base navigation components)
2015-09-29T08:50:52.409Z,1443516652.409 [Module Loader](DEBUG): Loading Module at Modules/Sample.so
2015-09-29T08:50:52.418Z,1443516652.418 [Module Loader](DEBUG): Loaded Module: Sample (This is a Sample Module of Sample Components)
2015-09-29T08:50:52.423Z,1443516652.423 [Module Loader](DEBUG): Loading Module at Modules/Science.so
2015-09-29T08:50:52.724Z,1443516652.724 [CTD_NeilBrown] Loaded
2015-09-29T08:50:52.724Z,1443516652.724 [ComponentRegistry](DEBUG): Component "CTD_NeilBrown" handled in its own thread.
2015-09-29T08:50:52.730Z,1443516652.730 [CTD_NeilBrown ThreadHandler](DEBUG): Created PCaller Thread at 4059D4E0
2015-09-29T08:50:52.731Z,1443516652.731 [CTD_NeilBrown ThreadHandler](INFO): Protected caller Thread ID is 811
2015-09-29T08:50:52.744Z,1443516652.744 [ISUS] Loaded
2015-09-29T08:50:52.744Z,1443516652.744 [ComponentRegistry](DEBUG): SyncComponent "ISUS" handled in the control thread.
2015-09-29T08:50:52.763Z,1443516652.763 [PAR_Licor] Loaded
2015-09-29T08:50:52.763Z,1443516652.763 [ComponentRegistry](DEBUG): SyncComponent "PAR_Licor" handled in the control thread.
2015-09-29T08:50:52.819Z,1443516652.819 [WetLabsBB2FL] Loaded
2015-09-29T08:50:52.819Z,1443516652.819 [ComponentRegistry](DEBUG): Component "WetLabsBB2FL" handled in its own thread.
2015-09-29T08:50:52.822Z,1443516652.822 [WetLabsBB2FL ThreadHandler](DEBUG): Created PCaller Thread at 405CD4E0
2015-09-29T08:50:52.823Z,1443516652.823 [WetLabsBB2FL ThreadHandler](INFO): Protected caller Thread ID is 812
2015-09-29T08:50:52.823Z,1443516652.823 [Module Loader](DEBUG): Loaded Module: Science (Contains the science components)
2015-09-29T08:50:52.824Z,1443516652.824 [Module Loader](DEBUG): Loading Module at Modules/Sensor.so
2015-09-29T08:50:53.558Z,1443516653.558 [AHRS_sp3003D] Loaded
2015-09-29T08:50:53.558Z,1443516653.558 [ComponentRegistry](DEBUG): SyncComponent "AHRS_sp3003D" handled in the control thread.
2015-09-29T08:50:53.756Z,1443516653.756 [DataOverHttps] Loaded
2015-09-29T08:50:53.757Z,1443516653.757 [ComponentRegistry](DEBUG): SyncComponent "DataOverHttps" handled in the control thread.
2015-09-29T08:50:53.770Z,1443516653.770 [Depth_Keller] Loaded
2015-09-29T08:50:53.770Z,1443516653.770 [ComponentRegistry](DEBUG): SyncComponent "Depth_Keller" handled in the control thread.
2015-09-29T08:50:53.775Z,1443516653.775 [DropWeight] Loaded
2015-09-29T08:50:53.776Z,1443516653.776 [ComponentRegistry](DEBUG): SyncComponent "DropWeight" handled in the control thread.
2015-09-29T08:50:53.933Z,1443516653.933 [DVL_micro] Loaded
2015-09-29T08:50:53.933Z,1443516653.933 [ComponentRegistry](DEBUG): SyncComponent "DVL_micro" handled in the control thread.
2015-09-29T08:50:54.043Z,1443516654.043 [NAL9602] Loaded
2015-09-29T08:50:54.043Z,1443516654.043 [ComponentRegistry](DEBUG): SyncComponent "NAL9602" handled in the control thread.
2015-09-29T08:50:54.091Z,1443516654.091 [Onboard] Loaded
2015-09-29T08:50:54.091Z,1443516654.091 [ComponentRegistry](DEBUG): SyncComponent "Onboard" handled in the control thread.
2015-09-29T08:50:54.103Z,1443516654.103 [Radio_Surface] Loaded
2015-09-29T08:50:54.103Z,1443516654.103 [ComponentRegistry](DEBUG): Component "Radio_Surface" handled in its own thread.
2015-09-29T08:50:54.106Z,1443516654.106 [Radio_Surface ThreadHandler](DEBUG): Created PCaller Thread at 408114E0
2015-09-29T08:50:54.107Z,1443516654.107 [Radio_Surface ThreadHandler](INFO): Protected caller Thread ID is 813
2015-09-29T08:50:54.267Z,1443516654.267 [DAT] Loaded
2015-09-29T08:50:54.267Z,1443516654.267 [ComponentRegistry](DEBUG): SyncComponent "DAT" handled in the control thread.
2015-09-29T08:50:54.274Z,1443516654.274 [SCPI] Loaded
2015-09-29T08:50:54.274Z,1443516654.274 [ComponentRegistry](DEBUG): SyncComponent "SCPI" handled in the control thread.
2015-09-29T08:50:54.275Z,1443516654.275 [Module Loader](DEBUG): Loaded Module: Sensor (Contains the sensor components)
2015-09-29T08:50:54.276Z,1443516654.276 [Module Loader](DEBUG): Loading Module at Modules/Servo.so
2015-09-29T08:50:54.414Z,1443516654.414 [BuoyancyServo] Loaded
2015-09-29T08:50:54.414Z,1443516654.414 [ComponentRegistry](DEBUG): SyncComponent "BuoyancyServo" handled in the control thread.
2015-09-29T08:50:54.427Z,1443516654.427 [ElevatorServo] Loaded
2015-09-29T08:50:54.427Z,1443516654.427 [ComponentRegistry](DEBUG): SyncComponent "ElevatorServo" handled in the control thread.
2015-09-29T08:50:54.439Z,1443516654.439 [MassServo] Loaded
2015-09-29T08:50:54.440Z,1443516654.440 [ComponentRegistry](DEBUG): SyncComponent "MassServo" handled in the control thread.
2015-09-29T08:50:54.456Z,1443516654.456 [RudderServo] Loaded
2015-09-29T08:50:54.456Z,1443516654.456 [ComponentRegistry](DEBUG): SyncComponent "RudderServo" handled in the control thread.
2015-09-29T08:50:54.467Z,1443516654.467 [ThrusterServo] Loaded
2015-09-29T08:50:54.468Z,1443516654.468 [ComponentRegistry](DEBUG): SyncComponent "ThrusterServo" handled in the control thread.
2015-09-29T08:50:54.468Z,1443516654.468 [Module Loader](DEBUG): Loaded Module: Servo (This is the module containing motor controllers)
2015-09-29T08:50:54.469Z,1443516654.469 [Module Loader](DEBUG): Loading Module at Modules/Simulator.so
2015-09-29T08:50:54.675Z,1443516654.675 [InternalSim] Loaded
2015-09-29T08:50:54.675Z,1443516654.675 [ComponentRegistry](DEBUG): SyncComponent "InternalSim" handled in the control thread.
2015-09-29T08:50:54.676Z,1443516654.676 [Module Loader](DEBUG): Loaded Module: Simulator (This is the module containing the Simulator)
2015-09-29T08:50:54.677Z,1443516654.677 [Module Loader](DEBUG): Loading Module at Modules/Trigger.so
2015-09-29T08:50:54.721Z,1443516654.721 [Module Loader](DEBUG): Loaded Module: Trigger (Contains triggers for use in missions)
2015-09-29T08:50:54.725Z,1443516654.725 [ComponentRegistry](DEBUG): SyncComponent "MissionManager" handled in the control thread.
2015-09-29T08:50:54.726Z,1443516654.726 [ComponentRegistry](DEBUG): SyncComponent "Reporter" handled in the control thread.
2015-09-29T08:50:54.733Z,1443516654.733 [ComponentRegistry](DEBUG): Component "NavChartDb" handled in its own thread.
2015-09-29T08:50:54.734Z,1443516654.734 [NavChartDb ThreadHandler](DEBUG): Created PCaller Thread at 408BF4E0
2015-09-29T08:50:54.735Z,1443516654.735 [NavChartDb ThreadHandler](INFO): Protected caller Thread ID is 814
2015-09-29T08:50:54.739Z,1443516654.739 [Supervisor](INFO): Main Thread ID is 761
2015-09-29T08:50:54.740Z,1443516654.740 [Supervisor](DEBUG): Running supervisor.
2015-09-29T08:50:54.740Z,1443516654.740 [CommandLine ThreadHandler](INFO): Handler Thread ID is 815
2015-09-29T08:50:54.747Z,1443516654.747 [controlThread ThreadHandler](INFO): Handler Thread ID is 816
2015-09-29T08:50:54.747Z,1443516654.747 [controlThread](DEBUG): Initializing ControlThread
2015-09-29T08:50:54.748Z,1443516654.748 [VerticalControl](DEBUG): Initialize VerticalControlComponent.
2015-09-29T08:50:54.750Z,1443516654.750 [HorizontalControl](DEBUG): Initialize HorizontalControlComponent.
2015-09-29T08:50:54.751Z,1443516654.751 [SpeedControl](DEBUG): Initialize SpeedControlComponent.
2015-09-29T08:50:54.751Z,1443516654.751 [LoopControl](DEBUG): Initialize LoopControlComponent.
2015-09-29T08:50:54.752Z,1443516654.752 [SBIT](INFO): Initialize SBIT Component.
2015-09-29T08:50:54.752Z,1443516654.752 [SBIT](IMPORTANT): Tethys CM Info: SVN revision:12634
2015-09-29T08:50:54.754Z,1443516654.754 [SBIT](INFO): Kernel Reporting Different Release From Configuration.
Kernel Expected: 2.6.32-45-generic-pae
Kernel Reported: 2.6.27.8
2015-09-29T08:50:54.754Z,1443516654.754 [SBIT](INFO): Kernel Reporting Different Version From Configuration.
Kernel Expected: #102-Ubuntu SMP Wed Jan 2 22:10:16 UTC 2013
Kernel Reported: #641 PREEMPT Mon Sep 28 16:45:10 PDT 2015
2015-09-29T08:50:54.755Z,1443516654.755 [SBIT](INFO): Beginning SBIT in 20.000000 seconds.
2015-09-29T08:50:54.755Z,1443516654.755 [IBIT](INFO): Initialize IBIT Component.
2015-09-29T08:50:54.756Z,1443516654.756 [CBIT](DEBUG): Initialize CBIT Component.
2015-09-29T08:50:54.756Z,1443516654.756 [CBIT](FAULT): LAST RESTART WAS UNINTENTIONAL.
2015-09-29T08:50:54.757Z,1443516654.757 [CBIT](INFO): Last reboot was NOT due to watchdog timer.
2015-09-29T08:50:54.757Z,1443516654.757 [DepthRateCalculator](DEBUG): Initializing DepthRateCalculator.
2015-09-29T08:50:54.757Z,1443516654.757 [PitchRateCalculator](DEBUG): Initializing PitchRateCalculator.
2015-09-29T08:50:54.757Z,1443516654.757 [SpeedCalculator](DEBUG): Initializing SpeedCalculator.
2015-09-29T08:50:54.758Z,1443516654.758 [TempGradientCalculator](DEBUG): Initializing TempGradientCalculator.
2015-09-29T08:50:54.758Z,1443516654.758 [VerticalTemperatureHomogeneityIndexCalculator](DEBUG): (re)initializing
2015-09-29T08:50:54.759Z,1443516654.759 [YawRateCalculator](DEBUG): Initializing YawRateCalculator.
2015-09-29T08:50:54.760Z,1443516654.760 [DeadReckonUsingMultipleVelocitySources](DEBUG): Initializing DeadReckonUsingMultipleVelocitySources component.
2015-09-29T08:50:54.760Z,1443516654.760 [DeadReckonUsingMultipleVelocitySources](INFO): Will consider orientation measurement stale after 120s.
2015-09-29T08:50:54.761Z,1443516654.761 [DeadReckonUsingMultipleVelocitySources](INFO): Will consider velocity measurement stale after 20s.
2015-09-29T08:50:54.761Z,1443516654.761 [DeadReckonUsingSpeedCalculator](DEBUG): Initializing DeadReckonUsingSpeedCalculator component.
2015-09-29T08:50:54.762Z,1443516654.762 [DeadReckonUsingSpeedCalculator](INFO): Will consider orientation measurement stale after 120s.
2015-09-29T08:50:54.762Z,1443516654.762 [DeadReckonUsingSpeedCalculator](INFO): Will consider velocity measurement stale after 20s.
2015-09-29T08:50:54.762Z,1443516654.762 [NavChart](DEBUG): Initialize NavChart Navigation.
2015-09-29T08:50:54.763Z,1443516654.763 [UniversalFixResidualReporter](DEBUG): Initializing UniversalFixResidualReporter component.
2015-09-29T08:50:54.768Z,1443516654.768 [InternalSim](DEBUG):  InternalSim initializing...
2015-09-29T08:50:54.803Z,1443516654.803 [logger ThreadHandler](INFO): Handler Thread ID is 817
2015-09-29T08:50:54.930Z,1443516654.930 [CTD_NeilBrown ThreadHandler](INFO): Handler Thread ID is 818
2015-09-29T08:50:54.935Z,1443516654.935 [MissionManager](INFO): Loading Mission: Missions/Startup.xml
2015-09-29T08:50:54.951Z,1443516654.951 [WetLabsBB2FL ThreadHandler](INFO): Handler Thread ID is 819
2015-09-29T08:50:54.954Z,1443516654.954 [Radio_Surface ThreadHandler](INFO): Handler Thread ID is 820
2015-09-29T08:50:54.963Z,1443516654.963 [NavChartDb ThreadHandler](INFO): Handler Thread ID is 821
2015-09-29T08:50:54.981Z,1443516654.981 [NavChartDb](INFO): Looking for Electronic Nav Chart files in directory: Resources
2015-09-29T08:50:54.982Z,1443516654.982 [Startup:A.GoToSurface](DEBUG): Construct GoToSurface.
2015-09-29T08:50:54.983Z,1443516654.983 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US1WC07M.000
2015-09-29T08:50:54.984Z,1443516654.984 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US2WC11M.000
2015-09-29T08:50:54.984Z,1443516654.984 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US3CA52M.000
2015-09-29T08:50:54.984Z,1443516654.984 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US4CA60M.000
2015-09-29T08:50:54.984Z,1443516654.984 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA50M.000
2015-09-29T08:50:54.984Z,1443516654.984 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA61M.000
2015-09-29T08:50:54.985Z,1443516654.985 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA62M.000
2015-09-29T08:50:54.985Z,1443516654.985 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA83M.000
2015-09-29T08:50:55.045Z,1443516655.045 [MissionManager](DEBUG): 
<?xml version="1.0" encoding="UTF-8"?>
<Mission xmlns="Tethys"
       xmlns:Control="Tethys/Control"
       xmlns:Guidance="Tethys/Guidance" 
       xmlns:Units="Tethys/Units"
       xmlns:Universal="Tethys/Universal"
       xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
       xsi:schemaLocation="Tethys http://okeanids.mbari.org/tethys/Xml/Tethys.xsd
                           Tethys/Control http://okeanids.mbari.org/tethys/Xml/Control.xsd
                           Tethys/Guidance http://okeanids.mbari.org/tethys/Xml/Guidance.xsd
                           Tethys/Units http://okeanids.mbari.org/tethys/Xml/Units.xsd
                           Tethys/Universal http://okeanids.mbari.org/tethys/Xml/Universal.xsd"
       Id="Startup">

    <Guidance:GoToSurface>
        <Progression/>
    </Guidance:GoToSurface>

    <Aggregate Id="StartupSatComms">

        <Sequence/>

        <ReadDatum>
            <Timeout Duration="P1M" />
            <Universal:latitude_fix/>
        </ReadDatum>

        <ReadDatum>
            <Timeout Duration="P1M" />
            <Universal:platform_communications/>
        </ReadDatum>

    </Aggregate>

</Mission>


2015-09-29T08:50:55.046Z,1443516655.046 [MissionManager](INFO): Loading Mission: Missions/Default.xml
2015-09-29T08:50:55.100Z,1443516655.100 [MissionManager](INFO): DefineArg Default.ElapsedSinceDefaultStarted = 0.000000 min
2015-09-29T08:50:55.101Z,1443516655.101 [Default:A.GoToSurface](DEBUG): Construct GoToSurface.
2015-09-29T08:50:55.152Z,1443516655.152 [Default:CheckIn:Read_Iridium:A_Timeout:A.Execute](DEBUG): Construct Execute.
2015-09-29T08:50:55.155Z,1443516655.155 [Default:CheckIn:C.Wait](DEBUG): Construct Wait.
2015-09-29T08:50:55.189Z,1443516655.189 [Default:D.Execute](DEBUG): Construct Execute.
2015-09-29T08:50:55.216Z,1443516655.216 [MissionManager](DEBUG): 
<?xml version="1.0" encoding="UTF-8"?>
<Mission xmlns="Tethys"
xmlns:Guidance="Tethys/Guidance"
xmlns:Units="Tethys/Units"
xmlns:Universal="Tethys/Universal"
xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
xsi:schemaLocation="Tethys http://okeanids.mbari.org/tethys/Xml/Tethys.xsd
Tethys/Guidance http://okeanids.mbari.org/tethys/Xml/Guidance.xsd
Tethys/Units http://okeanids.mbari.org/tethys/Xml/Units.xsd
Tethys/Universal http://okeanids.mbari.org/tethys/Xml/Universal.xsd"
Id="Default">

    <DefineArg Name="ElapsedSinceDefaultStarted"><Units:minute/><Value>0</Value></DefineArg>

    <Guidance:GoToSurface>
        <Progression/>
    </Guidance:GoToSurface>

    <Aggregate Id="CheckIn">

        <Sequence Repeat="288"/>

        <ReadDatum Id="Read_GPS">
            <Sequence/>
            <Timeout Duration="P5M"/>
            <Universal:time_fix/>
        </ReadDatum>

        <ReadDatum Id="Read_Iridium">
            <Sequence/>
            <Timeout Duration="P2H">
                <Guidance:Execute>
                    <Sequence/>
                    <Setting><Guidance:Execute.command/><String>Burn 300</String></Setting>
                </Guidance:Execute>
                <Syslog Severity="Critical">Dropped weight due to communications timeout.</Syslog>
            </Timeout>
            <Universal:platform_communications/>
        </ReadDatum>

        <Guidance:Wait>
            <Sequence/>
            <Setting><Guidance:Wait.duration/><Units:minute/><Value>5</Value></Setting>
        </Guidance:Wait>

        <Assign><Sequence/><Arg Name="ElapsedSinceDefaultStarted"/><Elapsed><Universal:mission_started/></Elapsed></Assign>

        <Syslog Severity="Important">Default mission has been running for <Arg Name="ElapsedSinceDefaultStarted"/><Units:minute/></Syslog>

    </Aggregate>

    <Syslog Severity="Important">Restarting logs and Default mission.</Syslog>

    <Guidance:Execute>
        <Sequence/>
        <Setting><Guidance:Execute.command/><String>restart logs</String></Setting>
    </Guidance:Execute>

</Mission>


2015-09-29T08:50:55.222Z,1443516655.222 [controlThread](DEBUG): Component order: CycleStarter,InternalSim,ISUS,PAR_Licor,AHRS_sp3003D,DataOverHttps,Depth_Keller,DropWeight,DVL_micro,NAL9602,Onboard,DAT,SCPI,PAR_Licor,Depth_Keller,DepthRateCalculator,PitchRateCalculator,SpeedCalculator,TempGradientCalculator,VerticalTemperatureHomogeneityIndexCalculator,YawRateCalculator,StratificationFrontDetector,DeadReckonUsingMultipleVelocitySources,DeadReckonUsingSpeedCalculator,NavChart,UniversalFixResidualReporter,MissionManager,VerticalControl,HorizontalControl,SpeedControl,LoopControl,BuoyancyServo,ElevatorServo,MassServo,RudderServo,ThrusterServo,SBIT,IBIT,CBIT,Reporter,LogSplitter,
2015-09-29T08:50:55.467Z,1443516655.467 [DVL_micro](INFO): Initializing
2015-09-29T08:50:55.623Z,1443516655.623 [DeadReckonUsingMultipleVelocitySources](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T08:50:55.650Z,1443516655.650 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T08:50:55.762Z,1443516655.762 [BuoyancyServo](DEBUG): Initializing BuoyancyServo.
2015-09-29T08:50:55.776Z,1443516655.776 [ElevatorServo](DEBUG): Initializing ElevatorServo.
2015-09-29T08:50:55.787Z,1443516655.787 [MassServo](DEBUG): Initializing MassServo.
2015-09-29T08:50:55.798Z,1443516655.798 [RudderServo](DEBUG): Initializing RudderServo.
2015-09-29T08:50:55.810Z,1443516655.810 [ThrusterServo](DEBUG): Initializing ThrusterServo.
2015-09-29T08:50:56.064Z,1443516656.064 [DeadReckonUsingMultipleVelocitySources](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T08:50:56.065Z,1443516656.065 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T08:51:05.118Z,1443516665.118 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T08:51:05.470Z,1443516665.470 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T08:51:05.605Z,1443516665.605 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T08:51:05.994Z,1443516665.994 [DataOverHttps](INFO): setting available, lastComms_.elapsed()=0.003100
2015-09-29T08:51:05.998Z,1443516665.998 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T08:51:06.392Z,1443516666.392 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T08:51:06.791Z,1443516666.791 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T08:51:07.192Z,1443516667.192 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T08:51:07.592Z,1443516667.592 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T08:51:07.991Z,1443516667.991 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T08:51:08.392Z,1443516668.392 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T08:51:08.790Z,1443516668.790 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T08:51:09.191Z,1443516669.191 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T08:51:09.591Z,1443516669.591 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T08:51:09.991Z,1443516669.991 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T08:51:10.391Z,1443516670.391 [NAL9602](INFO): No messages in MT queue
2015-09-29T08:51:10.392Z,1443516670.392 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T08:51:10.792Z,1443516670.792 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T08:51:11.190Z,1443516671.190 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T08:51:11.591Z,1443516671.591 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T08:51:11.991Z,1443516671.991 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T08:51:12.391Z,1443516672.391 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T08:51:12.790Z,1443516672.790 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T08:51:13.191Z,1443516673.191 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T08:51:13.591Z,1443516673.591 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T08:51:13.990Z,1443516673.990 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T08:51:14.390Z,1443516674.390 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T08:51:14.791Z,1443516674.791 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T08:51:15.192Z,1443516675.192 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T08:51:15.206Z,1443516675.206 [SBIT](IMPORTANT): Beginning Startup BIT
2015-09-29T08:51:15.592Z,1443516675.592 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T08:51:15.992Z,1443516675.992 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T08:51:16.391Z,1443516676.391 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T08:51:16.791Z,1443516676.791 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T08:51:17.191Z,1443516677.191 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T08:51:17.592Z,1443516677.592 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T08:51:17.991Z,1443516677.991 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T08:51:18.394Z,1443516678.394 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T08:51:18.794Z,1443516678.794 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T08:51:19.194Z,1443516679.194 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T08:51:19.594Z,1443516679.594 [D