2015-09-29T08:42:55.419Z,1443516175.419 [Supervisor](DEBUG): Initializing supervisor.
2015-09-29T08:42:55.423Z,1443516175.423 [SyncHandler](DEBUG): Created PCaller Thread at 4034C4E0
2015-09-29T08:42:55.423Z,1443516175.423 [SyncHandler](INFO): Protected caller Thread ID is 761
2015-09-29T08:42:55.424Z,1443516175.424 [ComponentRegistry](DEBUG): Component "controlThread" handled in its own thread.
2015-09-29T08:42:55.427Z,1443516175.427 [controlThread ThreadHandler](DEBUG): Created PCaller Thread at 4037C4E0
2015-09-29T08:42:55.427Z,1443516175.427 [controlThread ThreadHandler](INFO): Protected caller Thread ID is 762
2015-09-29T08:42:55.430Z,1443516175.430 [ComponentRegistry](DEBUG): SyncComponent "CycleStarter" handled in the control thread.
2015-09-29T08:42:55.442Z,1443516175.442 [ComponentRegistry](DEBUG): Component "CommandLine" handled in its own thread.
2015-09-29T08:42:55.447Z,1443516175.447 [CommandLine ThreadHandler](DEBUG): Created PCaller Thread at 403AC4E0
2015-09-29T08:42:55.447Z,1443516175.447 [CommandLine ThreadHandler](INFO): Protected caller Thread ID is 763
2015-09-29T08:42:55.448Z,1443516175.448 [ComponentRegistry](DEBUG): Component "logger" handled in its own thread.
2015-09-29T08:42:55.451Z,1443516175.451 [logger ThreadHandler](DEBUG): Created PCaller Thread at 403DC4E0
2015-09-29T08:42:55.451Z,1443516175.451 [logger ThreadHandler](INFO): Protected caller Thread ID is 764
2015-09-29T08:42:55.453Z,1443516175.453 [ComponentRegistry](DEBUG): SyncComponent "LogSplitter" handled in the control thread.
2015-09-29T08:42:55.453Z,1443516175.453 [Supervisor](INFO): Looking for Config files in directory: Config/
2015-09-29T08:42:55.457Z,1443516175.457 [Supervisor](INFO): Opening Config file at: Config/Control.cfg
2015-09-29T08:42:55.846Z,1443516175.846 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Control
2015-09-29T08:42:55.848Z,1443516175.848 [Supervisor](INFO): Opening Config file at: Config/BIT.cfg
2015-09-29T08:42:56.039Z,1443516176.039 [ComponentRegistry](DEBUG): Loaded Config Component "Config/BIT
2015-09-29T08:42:56.041Z,1443516176.041 [Supervisor](INFO): Opening Config file at: Config/Derivation.cfg
2015-09-29T08:42:56.186Z,1443516176.186 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Derivation
2015-09-29T08:42:56.187Z,1443516176.187 [Supervisor](INFO): Opening Config file at: Config/Estimation.cfg
2015-09-29T08:42:56.335Z,1443516176.335 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Estimation
2015-09-29T08:42:56.336Z,1443516176.336 [Supervisor](INFO): Opening Config file at: Config/Guidance.cfg
2015-09-29T08:42:56.430Z,1443516176.430 [Supervisor](INFO): Opening Config file at: Config/Navigation.cfg
2015-09-29T08:42:56.651Z,1443516176.651 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Navigation
2015-09-29T08:42:56.652Z,1443516176.652 [Supervisor](INFO): Opening Config file at: Config/Sample.cfg
2015-09-29T08:42:56.747Z,1443516176.747 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Sample
2015-09-29T08:42:56.748Z,1443516176.748 [Supervisor](INFO): Opening Config file at: Config/Science.cfg
2015-09-29T08:42:57.060Z,1443516177.060 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Science
2015-09-29T08:42:57.060Z,1443516177.060 [Supervisor](INFO): Opening Config file at: Config/Sensor.cfg
2015-09-29T08:42:57.464Z,1443516177.464 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Sensor
2015-09-29T08:42:57.464Z,1443516177.464 [Supervisor](INFO): Opening Config file at: Config/Servo.cfg
2015-09-29T08:42:57.816Z,1443516177.816 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Servo
2015-09-29T08:42:57.818Z,1443516177.818 [Supervisor](INFO): Opening Config file at: Config/Simulator.cfg
2015-09-29T08:42:58.412Z,1443516178.412 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Simulator
2015-09-29T08:42:58.413Z,1443516178.413 [Supervisor](INFO): Opening Config file at: Config/logger.cfg
2015-09-29T08:42:58.644Z,1443516178.644 [ComponentRegistry](DEBUG): Loaded Config Component "Config/logger
2015-09-29T08:42:58.644Z,1443516178.644 [Supervisor](INFO): Opening Config file at: Config/secure.cfg
2015-09-29T08:42:58.754Z,1443516178.754 [ComponentRegistry](DEBUG): Loaded Config Component "Config/secure
2015-09-29T08:42:58.755Z,1443516178.755 [Supervisor](INFO): Opening Config file at: Config/vehicle.cfg
2015-09-29T08:42:59.268Z,1443516179.268 [ComponentRegistry](DEBUG): Loaded Config Component "Config/vehicle
2015-09-29T08:42:59.269Z,1443516179.269 [Supervisor](INFO): Opening Config file at: Config/workSite.cfg
2015-09-29T08:42:59.414Z,1443516179.414 [ComponentRegistry](DEBUG): Loaded Config Component "Config/workSite
2015-09-29T08:42:59.416Z,1443516179.416 [Supervisor](INFO): Looking for Config files in directory: Config/(none)/
2015-09-29T08:42:59.416Z,1443516179.416 [Supervisor](FAULT): Ignoring configuration overrides from Data/persisted.cfg
2015-09-29T08:42:59.421Z,1443516179.421 [Module Loader](DEBUG): Loading Module at Modules/Control.so
2015-09-29T08:42:59.496Z,1443516179.496 [VerticalControl](DEBUG): Construct VerticalControl.
2015-09-29T08:42:59.632Z,1443516179.632 [VerticalControl] Loaded
2015-09-29T08:42:59.632Z,1443516179.632 [ComponentRegistry](DEBUG): SyncComponent "VerticalControl" handled in the control thread.
2015-09-29T08:42:59.633Z,1443516179.633 [HorizontalControl](DEBUG): Construct HorizontalControl.
2015-09-29T08:42:59.715Z,1443516179.715 [HorizontalControl] Loaded
2015-09-29T08:42:59.715Z,1443516179.715 [ComponentRegistry](DEBUG): SyncComponent "HorizontalControl" handled in the control thread.
2015-09-29T08:42:59.716Z,1443516179.716 [SpeedControl](DEBUG): Construct SpeedControl.
2015-09-29T08:42:59.722Z,1443516179.722 [SpeedControl] Loaded
2015-09-29T08:42:59.726Z,1443516179.726 [ComponentRegistry](DEBUG): SyncComponent "SpeedControl" handled in the control thread.
2015-09-29T08:42:59.727Z,1443516179.727 [LoopControl](DEBUG): Construct LoopControl.
2015-09-29T08:42:59.728Z,1443516179.728 [LoopControl] Loaded
2015-09-29T08:42:59.728Z,1443516179.728 [ComponentRegistry](DEBUG): SyncComponent "LoopControl" handled in the control thread.
2015-09-29T08:42:59.728Z,1443516179.728 [Module Loader](DEBUG): Loaded Module: Control (Contains the Control components, such as Depth, Heading, and Speed Control)
2015-09-29T08:42:59.729Z,1443516179.729 [Module Loader](DEBUG): Loading Module at Modules/BIT.so
2015-09-29T08:42:59.888Z,1443516179.888 [SBIT](DEBUG): Construct Startup Built In Test.
2015-09-29T08:42:59.900Z,1443516179.900 [SBIT] Loaded
2015-09-29T08:42:59.901Z,1443516179.901 [ComponentRegistry](DEBUG): SyncComponent "SBIT" handled in the control thread.
2015-09-29T08:42:59.901Z,1443516179.901 [IBIT](DEBUG): Construct Initiated Built In Test.
2015-09-29T08:42:59.936Z,1443516179.936 [IBIT] Loaded
2015-09-29T08:42:59.936Z,1443516179.936 [ComponentRegistry](DEBUG): SyncComponent "IBIT" handled in the control thread.
2015-09-29T08:42:59.938Z,1443516179.938 [CBIT](DEBUG): Construct Continuous Built In Test.
2015-09-29T08:43:00.095Z,1443516180.095 [CBIT] Loaded
2015-09-29T08:43:00.096Z,1443516180.096 [ComponentRegistry](DEBUG): SyncComponent "CBIT" handled in the control thread.
2015-09-29T08:43:00.096Z,1443516180.096 [Module Loader](DEBUG): Loaded Module: BIT (Contains the BuiltInTest components, such as C Built In Test)
2015-09-29T08:43:00.097Z,1443516180.097 [Module Loader](DEBUG): Loading Module at Modules/Derivation.so
2015-09-29T08:43:00.138Z,1443516180.138 [DepthRateCalculator] Loaded
2015-09-29T08:43:00.139Z,1443516180.139 [ComponentRegistry](DEBUG): SyncComponent "DepthRateCalculator" handled in the control thread.
2015-09-29T08:43:00.144Z,1443516180.144 [PitchRateCalculator] Loaded
2015-09-29T08:43:00.144Z,1443516180.144 [ComponentRegistry](DEBUG): SyncComponent "PitchRateCalculator" handled in the control thread.
2015-09-29T08:43:00.160Z,1443516180.160 [SpeedCalculator] Loaded
2015-09-29T08:43:00.160Z,1443516180.160 [ComponentRegistry](DEBUG): SyncComponent "SpeedCalculator" handled in the control thread.
2015-09-29T08:43:00.178Z,1443516180.178 [TempGradientCalculator] Loaded
2015-09-29T08:43:00.178Z,1443516180.178 [ComponentRegistry](DEBUG): SyncComponent "TempGradientCalculator" handled in the control thread.
2015-09-29T08:43:00.200Z,1443516180.200 [VerticalTemperatureHomogeneityIndexCalculator] Loaded
2015-09-29T08:43:00.200Z,1443516180.200 [ComponentRegistry](DEBUG): SyncComponent "VerticalTemperatureHomogeneityIndexCalculator" handled in the control thread.
2015-09-29T08:43:00.205Z,1443516180.205 [YawRateCalculator] Loaded
2015-09-29T08:43:00.206Z,1443516180.206 [ComponentRegistry](DEBUG): SyncComponent "YawRateCalculator" handled in the control thread.
2015-09-29T08:43:00.206Z,1443516180.206 [Module Loader](DEBUG): Loaded Module: Derivation (Contains the base derivation components)
2015-09-29T08:43:00.207Z,1443516180.207 [Module Loader](DEBUG): Loading Module at Modules/Estimation.so
2015-09-29T08:43:00.329Z,1443516180.329 [StratificationFrontDetector](INFO): threshold set to: 0.399988 degC
2015-09-29T08:43:00.329Z,1443516180.329 [StratificationFrontDetector](DEBUG): (re)initializing
2015-09-29T08:43:00.329Z,1443516180.329 [StratificationFrontDetector] Loaded
2015-09-29T08:43:00.329Z,1443516180.329 [ComponentRegistry](DEBUG): SyncComponent "StratificationFrontDetector" handled in the control thread.
2015-09-29T08:43:00.330Z,1443516180.330 [Module Loader](DEBUG): Loaded Module: Estimation (Contains the base estimation components)
2015-09-29T08:43:00.331Z,1443516180.331 [Module Loader](DEBUG): Loading Module at Modules/Guidance.so
2015-09-29T08:43:00.628Z,1443516180.628 [Module Loader](DEBUG): Loaded Module: Guidance (Contains behaviors and commands)
2015-09-29T08:43:00.629Z,1443516180.629 [Module Loader](DEBUG): Loading Module at Modules/Navigation.so
2015-09-29T08:43:00.763Z,1443516180.763 [DeadReckonUsingMultipleVelocitySources] Loaded
2015-09-29T08:43:00.764Z,1443516180.764 [ComponentRegistry](DEBUG): SyncComponent "DeadReckonUsingMultipleVelocitySources" handled in the control thread.
2015-09-29T08:43:00.826Z,1443516180.826 [DeadReckonUsingSpeedCalculator] Loaded
2015-09-29T08:43:00.826Z,1443516180.826 [ComponentRegistry](DEBUG): SyncComponent "DeadReckonUsingSpeedCalculator" handled in the control thread.
2015-09-29T08:43:00.848Z,1443516180.848 [NavChart] Loaded
2015-09-29T08:43:00.848Z,1443516180.848 [ComponentRegistry](DEBUG): SyncComponent "NavChart" handled in the control thread.
2015-09-29T08:43:00.853Z,1443516180.853 [UniversalFixResidualReporter] Loaded
2015-09-29T08:43:00.854Z,1443516180.854 [ComponentRegistry](DEBUG): SyncComponent "UniversalFixResidualReporter" handled in the control thread.
2015-09-29T08:43:00.854Z,1443516180.854 [Module Loader](DEBUG): Loaded Module: Navigation (Contains the base navigation components)
2015-09-29T08:43:00.855Z,1443516180.855 [Module Loader](DEBUG): Loading Module at Modules/Sample.so
2015-09-29T08:43:00.863Z,1443516180.863 [Module Loader](DEBUG): Loaded Module: Sample (This is a Sample Module of Sample Components)
2015-09-29T08:43:00.864Z,1443516180.864 [Module Loader](DEBUG): Loading Module at Modules/Science.so
2015-09-29T08:43:01.158Z,1443516181.158 [CTD_NeilBrown] Loaded
2015-09-29T08:43:01.158Z,1443516181.158 [ComponentRegistry](DEBUG): Component "CTD_NeilBrown" handled in its own thread.
2015-09-29T08:43:01.167Z,1443516181.167 [CTD_NeilBrown ThreadHandler](DEBUG): Created PCaller Thread at 4059D4E0
2015-09-29T08:43:01.167Z,1443516181.167 [CTD_NeilBrown ThreadHandler](INFO): Protected caller Thread ID is 810
2015-09-29T08:43:01.180Z,1443516181.180 [ISUS] Loaded
2015-09-29T08:43:01.180Z,1443516181.180 [ComponentRegistry](DEBUG): SyncComponent "ISUS" handled in the control thread.
2015-09-29T08:43:01.199Z,1443516181.199 [PAR_Licor] Loaded
2015-09-29T08:43:01.200Z,1443516181.200 [ComponentRegistry](DEBUG): SyncComponent "PAR_Licor" handled in the control thread.
2015-09-29T08:43:01.256Z,1443516181.256 [WetLabsBB2FL] Loaded
2015-09-29T08:43:01.256Z,1443516181.256 [ComponentRegistry](DEBUG): Component "WetLabsBB2FL" handled in its own thread.
2015-09-29T08:43:01.259Z,1443516181.259 [WetLabsBB2FL ThreadHandler](DEBUG): Created PCaller Thread at 405CD4E0
2015-09-29T08:43:01.259Z,1443516181.259 [WetLabsBB2FL ThreadHandler](INFO): Protected caller Thread ID is 811
2015-09-29T08:43:01.259Z,1443516181.259 [Module Loader](DEBUG): Loaded Module: Science (Contains the science components)
2015-09-29T08:43:01.260Z,1443516181.260 [Module Loader](DEBUG): Loading Module at Modules/Sensor.so
2015-09-29T08:43:02.002Z,1443516182.002 [AHRS_sp3003D] Loaded
2015-09-29T08:43:02.003Z,1443516182.003 [ComponentRegistry](DEBUG): SyncComponent "AHRS_sp3003D" handled in the control thread.
2015-09-29T08:43:02.197Z,1443516182.197 [DataOverHttps] Loaded
2015-09-29T08:43:02.197Z,1443516182.197 [ComponentRegistry](DEBUG): SyncComponent "DataOverHttps" handled in the control thread.
2015-09-29T08:43:02.215Z,1443516182.215 [Depth_Keller] Loaded
2015-09-29T08:43:02.215Z,1443516182.215 [ComponentRegistry](DEBUG): SyncComponent "Depth_Keller" handled in the control thread.
2015-09-29T08:43:02.220Z,1443516182.220 [DropWeight] Loaded
2015-09-29T08:43:02.221Z,1443516182.221 [ComponentRegistry](DEBUG): SyncComponent "DropWeight" handled in the control thread.
2015-09-29T08:43:02.375Z,1443516182.375 [DVL_micro] Loaded
2015-09-29T08:43:02.375Z,1443516182.375 [ComponentRegistry](DEBUG): SyncComponent "DVL_micro" handled in the control thread.
2015-09-29T08:43:02.485Z,1443516182.485 [NAL9602] Loaded
2015-09-29T08:43:02.485Z,1443516182.485 [ComponentRegistry](DEBUG): SyncComponent "NAL9602" handled in the control thread.
2015-09-29T08:43:02.533Z,1443516182.533 [Onboard] Loaded
2015-09-29T08:43:02.533Z,1443516182.533 [ComponentRegistry](DEBUG): SyncComponent "Onboard" handled in the control thread.
2015-09-29T08:43:02.549Z,1443516182.549 [Radio_Surface] Loaded
2015-09-29T08:43:02.549Z,1443516182.549 [ComponentRegistry](DEBUG): Component "Radio_Surface" handled in its own thread.
2015-09-29T08:43:02.555Z,1443516182.555 [Radio_Surface ThreadHandler](DEBUG): Created PCaller Thread at 408114E0
2015-09-29T08:43:02.555Z,1443516182.555 [Radio_Surface ThreadHandler](INFO): Protected caller Thread ID is 812
2015-09-29T08:43:02.717Z,1443516182.717 [DAT] Loaded
2015-09-29T08:43:02.717Z,1443516182.717 [ComponentRegistry](DEBUG): SyncComponent "DAT" handled in the control thread.
2015-09-29T08:43:02.724Z,1443516182.724 [SCPI] Loaded
2015-09-29T08:43:02.724Z,1443516182.724 [ComponentRegistry](DEBUG): SyncComponent "SCPI" handled in the control thread.
2015-09-29T08:43:02.725Z,1443516182.725 [Module Loader](DEBUG): Loaded Module: Sensor (Contains the sensor components)
2015-09-29T08:43:02.726Z,1443516182.726 [Module Loader](DEBUG): Loading Module at Modules/Servo.so
2015-09-29T08:43:02.863Z,1443516182.863 [BuoyancyServo] Loaded
2015-09-29T08:43:02.863Z,1443516182.863 [ComponentRegistry](DEBUG): SyncComponent "BuoyancyServo" handled in the control thread.
2015-09-29T08:43:02.876Z,1443516182.876 [ElevatorServo] Loaded
2015-09-29T08:43:02.877Z,1443516182.877 [ComponentRegistry](DEBUG): SyncComponent "ElevatorServo" handled in the control thread.
2015-09-29T08:43:02.889Z,1443516182.889 [MassServo] Loaded
2015-09-29T08:43:02.889Z,1443516182.889 [ComponentRegistry](DEBUG): SyncComponent "MassServo" handled in the control thread.
2015-09-29T08:43:02.905Z,1443516182.905 [RudderServo] Loaded
2015-09-29T08:43:02.905Z,1443516182.905 [ComponentRegistry](DEBUG): SyncComponent "RudderServo" handled in the control thread.
2015-09-29T08:43:02.917Z,1443516182.917 [ThrusterServo] Loaded
2015-09-29T08:43:02.917Z,1443516182.917 [ComponentRegistry](DEBUG): SyncComponent "ThrusterServo" handled in the control thread.
2015-09-29T08:43:02.917Z,1443516182.917 [Module Loader](DEBUG): Loaded Module: Servo (This is the module containing motor controllers)
2015-09-29T08:43:02.918Z,1443516182.918 [Module Loader](DEBUG): Loading Module at Modules/Simulator.so
2015-09-29T08:43:03.120Z,1443516183.120 [InternalSim] Loaded
2015-09-29T08:43:03.121Z,1443516183.121 [ComponentRegistry](DEBUG): SyncComponent "InternalSim" handled in the control thread.
2015-09-29T08:43:03.121Z,1443516183.121 [Module Loader](DEBUG): Loaded Module: Simulator (This is the module containing the Simulator)
2015-09-29T08:43:03.122Z,1443516183.122 [Module Loader](DEBUG): Loading Module at Modules/Trigger.so
2015-09-29T08:43:03.165Z,1443516183.165 [Module Loader](DEBUG): Loaded Module: Trigger (Contains triggers for use in missions)
2015-09-29T08:43:03.169Z,1443516183.169 [ComponentRegistry](DEBUG): SyncComponent "MissionManager" handled in the control thread.
2015-09-29T08:43:03.170Z,1443516183.170 [ComponentRegistry](DEBUG): SyncComponent "Reporter" handled in the control thread.
2015-09-29T08:43:03.177Z,1443516183.177 [ComponentRegistry](DEBUG): Component "NavChartDb" handled in its own thread.
2015-09-29T08:43:03.179Z,1443516183.179 [NavChartDb ThreadHandler](DEBUG): Created PCaller Thread at 408BF4E0
2015-09-29T08:43:03.179Z,1443516183.179 [NavChartDb ThreadHandler](INFO): Protected caller Thread ID is 813
2015-09-29T08:43:03.184Z,1443516183.184 [Supervisor](INFO): Main Thread ID is 760
2015-09-29T08:43:03.184Z,1443516183.184 [Supervisor](DEBUG): Running supervisor.
2015-09-29T08:43:03.185Z,1443516183.185 [CommandLine ThreadHandler](INFO): Handler Thread ID is 814
2015-09-29T08:43:03.191Z,1443516183.191 [controlThread ThreadHandler](INFO): Handler Thread ID is 815
2015-09-29T08:43:03.192Z,1443516183.192 [controlThread](DEBUG): Initializing ControlThread
2015-09-29T08:43:03.192Z,1443516183.192 [VerticalControl](DEBUG): Initialize VerticalControlComponent.
2015-09-29T08:43:03.194Z,1443516183.194 [HorizontalControl](DEBUG): Initialize HorizontalControlComponent.
2015-09-29T08:43:03.195Z,1443516183.195 [SpeedControl](DEBUG): Initialize SpeedControlComponent.
2015-09-29T08:43:03.196Z,1443516183.196 [LoopControl](DEBUG): Initialize LoopControlComponent.
2015-09-29T08:43:03.196Z,1443516183.196 [SBIT](INFO): Initialize SBIT Component.
2015-09-29T08:43:03.196Z,1443516183.196 [SBIT](IMPORTANT): Tethys CM Info: SVN revision:12634
2015-09-29T08:43:03.198Z,1443516183.198 [SBIT](INFO): Kernel Reporting Different Release From Configuration.
Kernel Expected: 2.6.32-45-generic-pae
Kernel Reported: 2.6.27.8
2015-09-29T08:43:03.198Z,1443516183.198 [SBIT](INFO): Kernel Reporting Different Version From Configuration.
Kernel Expected: #102-Ubuntu SMP Wed Jan 2 22:10:16 UTC 2013
Kernel Reported: #641 PREEMPT Mon Sep 28 16:45:10 PDT 2015
2015-09-29T08:43:03.199Z,1443516183.199 [SBIT](INFO): Beginning SBIT in 20.000000 seconds.
2015-09-29T08:43:03.200Z,1443516183.200 [IBIT](INFO): Initialize IBIT Component.
2015-09-29T08:43:03.201Z,1443516183.201 [CBIT](DEBUG): Initialize CBIT Component.
2015-09-29T08:43:03.201Z,1443516183.201 [CBIT](FAULT): LAST RESTART WAS UNINTENTIONAL.
2015-09-29T08:43:03.201Z,1443516183.201 [CBIT](INFO): Last reboot was NOT due to watchdog timer.
2015-09-29T08:43:03.201Z,1443516183.201 [DepthRateCalculator](DEBUG): Initializing DepthRateCalculator.
2015-09-29T08:43:03.202Z,1443516183.202 [PitchRateCalculator](DEBUG): Initializing PitchRateCalculator.
2015-09-29T08:43:03.202Z,1443516183.202 [SpeedCalculator](DEBUG): Initializing SpeedCalculator.
2015-09-29T08:43:03.202Z,1443516183.202 [TempGradientCalculator](DEBUG): Initializing TempGradientCalculator.
2015-09-29T08:43:03.203Z,1443516183.203 [VerticalTemperatureHomogeneityIndexCalculator](DEBUG): (re)initializing
2015-09-29T08:43:03.203Z,1443516183.203 [YawRateCalculator](DEBUG): Initializing YawRateCalculator.
2015-09-29T08:43:03.204Z,1443516183.204 [DeadReckonUsingMultipleVelocitySources](DEBUG): Initializing DeadReckonUsingMultipleVelocitySources component.
2015-09-29T08:43:03.205Z,1443516183.205 [DeadReckonUsingMultipleVelocitySources](INFO): Will consider orientation measurement stale after 120s.
2015-09-29T08:43:03.205Z,1443516183.205 [DeadReckonUsingMultipleVelocitySources](INFO): Will consider velocity measurement stale after 20s.
2015-09-29T08:43:03.205Z,1443516183.205 [DeadReckonUsingSpeedCalculator](DEBUG): Initializing DeadReckonUsingSpeedCalculator component.
2015-09-29T08:43:03.206Z,1443516183.206 [DeadReckonUsingSpeedCalculator](INFO): Will consider orientation measurement stale after 120s.
2015-09-29T08:43:03.206Z,1443516183.206 [DeadReckonUsingSpeedCalculator](INFO): Will consider velocity measurement stale after 20s.
2015-09-29T08:43:03.207Z,1443516183.207 [NavChart](DEBUG): Initialize NavChart Navigation.
2015-09-29T08:43:03.207Z,1443516183.207 [UniversalFixResidualReporter](DEBUG): Initializing UniversalFixResidualReporter component.
2015-09-29T08:43:03.212Z,1443516183.212 [InternalSim](DEBUG):  InternalSim initializing...
2015-09-29T08:43:03.235Z,1443516183.235 [logger ThreadHandler](INFO): Handler Thread ID is 816
2015-09-29T08:43:03.275Z,1443516183.275 [CTD_NeilBrown ThreadHandler](INFO): Handler Thread ID is 817
2015-09-29T08:43:03.363Z,1443516183.363 [WetLabsBB2FL ThreadHandler](INFO): Handler Thread ID is 818
2015-09-29T08:43:03.419Z,1443516183.419 [Radio_Surface ThreadHandler](INFO): Handler Thread ID is 819
2015-09-29T08:43:03.438Z,1443516183.438 [MissionManager](INFO): Loading Mission: Missions/Startup.xml
2015-09-29T08:43:03.455Z,1443516183.455 [NavChartDb ThreadHandler](INFO): Handler Thread ID is 820
2015-09-29T08:43:03.508Z,1443516183.508 [NavChartDb](INFO): Looking for Electronic Nav Chart files in directory: Resources
2015-09-29T08:43:03.510Z,1443516183.510 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US1WC07M.000
2015-09-29T08:43:03.511Z,1443516183.511 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US2WC11M.000
2015-09-29T08:43:03.511Z,1443516183.511 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US3CA52M.000
2015-09-29T08:43:03.511Z,1443516183.511 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US4CA60M.000
2015-09-29T08:43:03.511Z,1443516183.511 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA50M.000
2015-09-29T08:43:03.512Z,1443516183.512 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA61M.000
2015-09-29T08:43:03.512Z,1443516183.512 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA62M.000
2015-09-29T08:43:03.512Z,1443516183.512 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA83M.000
2015-09-29T08:43:03.580Z,1443516183.580 [Startup:A.GoToSurface](DEBUG): Construct GoToSurface.
2015-09-29T08:43:03.619Z,1443516183.619 [MissionManager](DEBUG): 
<?xml version="1.0" encoding="UTF-8"?>
<Mission xmlns="Tethys"
       xmlns:Control="Tethys/Control"
       xmlns:Guidance="Tethys/Guidance" 
       xmlns:Units="Tethys/Units"
       xmlns:Universal="Tethys/Universal"
       xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
       xsi:schemaLocation="Tethys http://okeanids.mbari.org/tethys/Xml/Tethys.xsd
                           Tethys/Control http://okeanids.mbari.org/tethys/Xml/Control.xsd
                           Tethys/Guidance http://okeanids.mbari.org/tethys/Xml/Guidance.xsd
                           Tethys/Units http://okeanids.mbari.org/tethys/Xml/Units.xsd
                           Tethys/Universal http://okeanids.mbari.org/tethys/Xml/Universal.xsd"
       Id="Startup">

    <Guidance:GoToSurface>
        <Progression/>
    </Guidance:GoToSurface>

    <Aggregate Id="StartupSatComms">

        <Sequence/>

        <ReadDatum>
            <Timeout Duration="P1M" />
            <Universal:latitude_fix/>
        </ReadDatum>

        <ReadDatum>
            <Timeout Duration="P1M" />
            <Universal:platform_communications/>
        </ReadDatum>

    </Aggregate>

</Mission>


2015-09-29T08:43:03.620Z,1443516183.620 [MissionManager](INFO): Loading Mission: Missions/Default.xml
2015-09-29T08:43:03.673Z,1443516183.673 [MissionManager](INFO): DefineArg Default.ElapsedSinceDefaultStarted = 0.000000 min
2015-09-29T08:43:03.695Z,1443516183.695 [Default:A.GoToSurface](DEBUG): Construct GoToSurface.
2015-09-29T08:43:03.725Z,1443516183.725 [Default:CheckIn:Read_Iridium:A_Timeout:A.Execute](DEBUG): Construct Execute.
2015-09-29T08:43:03.728Z,1443516183.728 [Default:CheckIn:C.Wait](DEBUG): Construct Wait.
2015-09-29T08:43:03.742Z,1443516183.742 [Default:D.Execute](DEBUG): Construct Execute.
2015-09-29T08:43:03.746Z,1443516183.746 [MissionManager](DEBUG): 
<?xml version="1.0" encoding="UTF-8"?>
<Mission xmlns="Tethys"
xmlns:Guidance="Tethys/Guidance"
xmlns:Units="Tethys/Units"
xmlns:Universal="Tethys/Universal"
xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
xsi:schemaLocation="Tethys http://okeanids.mbari.org/tethys/Xml/Tethys.xsd
Tethys/Guidance http://okeanids.mbari.org/tethys/Xml/Guidance.xsd
Tethys/Units http://okeanids.mbari.org/tethys/Xml/Units.xsd
Tethys/Universal http://okeanids.mbari.org/tethys/Xml/Universal.xsd"
Id="Default">

    <DefineArg Name="ElapsedSinceDefaultStarted"><Units:minute/><Value>0</Value></DefineArg>

    <Guidance:GoToSurface>
        <Progression/>
    </Guidance:GoToSurface>

    <Aggregate Id="CheckIn">

        <Sequence Repeat="288"/>

        <ReadDatum Id="Read_GPS">
            <Sequence/>
            <Timeout Duration="P5M"/>
            <Universal:time_fix/>
        </ReadDatum>

        <ReadDatum Id="Read_Iridium">
            <Sequence/>
            <Timeout Duration="P2H">
                <Guidance:Execute>
                    <Sequence/>
                    <Setting><Guidance:Execute.command/><String>Burn 300</String></Setting>
                </Guidance:Execute>
                <Syslog Severity="Critical">Dropped weight due to communications timeout.</Syslog>
            </Timeout>
            <Universal:platform_communications/>
        </ReadDatum>

        <Guidance:Wait>
            <Sequence/>
            <Setting><Guidance:Wait.duration/><Units:minute/><Value>5</Value></Setting>
        </Guidance:Wait>

        <Assign><Sequence/><Arg Name="ElapsedSinceDefaultStarted"/><Elapsed><Universal:mission_started/></Elapsed></Assign>

        <Syslog Severity="Important">Default mission has been running for <Arg Name="ElapsedSinceDefaultStarted"/><Units:minute/></Syslog>

    </Aggregate>

    <Syslog Severity="Important">Restarting logs and Default mission.</Syslog>

    <Guidance:Execute>
        <Sequence/>
        <Setting><Guidance:Execute.command/><String>restart logs</String></Setting>
    </Guidance:Execute>

</Mission>


2015-09-29T08:43:03.756Z,1443516183.756 [controlThread](DEBUG): Component order: CycleStarter,InternalSim,ISUS,PAR_Licor,AHRS_sp3003D,DataOverHttps,Depth_Keller,DropWeight,DVL_micro,NAL9602,Onboard,DAT,SCPI,PAR_Licor,Depth_Keller,DepthRateCalculator,PitchRateCalculator,SpeedCalculator,TempGradientCalculator,VerticalTemperatureHomogeneityIndexCalculator,YawRateCalculator,StratificationFrontDetector,DeadReckonUsingMultipleVelocitySources,DeadReckonUsingSpeedCalculator,NavChart,UniversalFixResidualReporter,MissionManager,VerticalControl,HorizontalControl,SpeedControl,LoopControl,BuoyancyServo,ElevatorServo,MassServo,RudderServo,ThrusterServo,SBIT,IBIT,CBIT,Reporter,LogSplitter,
2015-09-29T08:43:03.958Z,1443516183.958 [DVL_micro](INFO): Initializing
2015-09-29T08:43:04.120Z,1443516184.120 [DeadReckonUsingMultipleVelocitySources](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T08:43:04.143Z,1443516184.143 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T08:43:04.267Z,1443516184.267 [BuoyancyServo](DEBUG): Initializing BuoyancyServo.
2015-09-29T08:43:04.282Z,1443516184.282 [ElevatorServo](DEBUG): Initializing ElevatorServo.
2015-09-29T08:43:04.304Z,1443516184.304 [MassServo](DEBUG): Initializing MassServo.
2015-09-29T08:43:04.323Z,1443516184.323 [RudderServo](DEBUG): Initializing RudderServo.
2015-09-29T08:43:04.328Z,1443516184.328 [ThrusterServo](DEBUG): Initializing ThrusterServo.
2015-09-29T08:43:04.587Z,1443516184.587 [DeadReckonUsingMultipleVelocitySources](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T08:43:04.588Z,1443516184.588 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T08:43:13.734Z,1443516193.734 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T08:43:14.095Z,1443516194.095 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T08:43:14.213Z,1443516194.213 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T08:43:14.611Z,1443516194.611 [DataOverHttps](INFO): setting available, lastComms_.elapsed()=0.003000
2015-09-29T08:43:14.614Z,1443516194.614 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T08:43:15.008Z,1443516195.008 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T08:43:15.408Z,1443516195.408 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T08:43:15.808Z,1443516195.808 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T08:43:16.207Z,1443516196.207 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T08:43:16.628Z,1443516196.628 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T08:43:17.020Z,1443516197.020 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T08:43:17.407Z,1443516197.407 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T08:43:17.807Z,1443516197.807 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T08:43:18.208Z,1443516198.208 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T08:43:18.621Z,1443516198.621 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T08:43:19.007Z,1443516199.007 [NAL9602](INFO): No messages in MT queue
2015-09-29T08:43:19.008Z,1443516199.008 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T08:43:19.408Z,1443516199.408 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T08:43:19.807Z,1443516199.807 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T08:43:20.208Z,1443516200.208 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T08:43:20.607Z,1443516200.607 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T08:43:21.007Z,1443516201.007 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T08:43:21.408Z,1443516201.408 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T08:43:21.807Z,1443516201.807 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T08:43:22.208Z,1443516202.208 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T08:43:22.607Z,1443516202.607 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T08:43:23.017Z,1443516203.017 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T08:43:23.417Z,1443516203.417 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T08:43:23.818Z,1443516203.818 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T08:43:23.831Z,1443516203.831 [SBIT](IMPORTANT): Beginning Startup BIT
2015-09-29T08:43:24.219Z,1443516204.219 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T08:43:24.617Z,1443516204.617 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T08:43:25.017Z,1443516205.017 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T08:43:25.417Z,1443516205.417 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T08:43:25.817Z,1443516205.817 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T08:43:26.208Z,1443516206.208 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T08:43:26.607Z,1443516206.607 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T08:43:27.007Z,1443516207.007 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T08:43:27.408Z,1443516207.408 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T08:43:27.808Z,1443516207.808 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T08:43:28.208Z,1443516208.208 [D