2015-09-29T08:34:58.105Z,1443515698.105 [Supervisor](DEBUG): Initializing supervisor.
2015-09-29T08:34:58.108Z,1443515698.108 [SyncHandler](DEBUG): Created PCaller Thread at 4034C4E0
2015-09-29T08:34:58.108Z,1443515698.108 [SyncHandler](INFO): Protected caller Thread ID is 761
2015-09-29T08:34:58.109Z,1443515698.109 [ComponentRegistry](DEBUG): Component "controlThread" handled in its own thread.
2015-09-29T08:34:58.111Z,1443515698.111 [controlThread ThreadHandler](DEBUG): Created PCaller Thread at 4037C4E0
2015-09-29T08:34:58.111Z,1443515698.111 [controlThread ThreadHandler](INFO): Protected caller Thread ID is 762
2015-09-29T08:34:58.114Z,1443515698.114 [ComponentRegistry](DEBUG): SyncComponent "CycleStarter" handled in the control thread.
2015-09-29T08:34:58.127Z,1443515698.127 [ComponentRegistry](DEBUG): Component "CommandLine" handled in its own thread.
2015-09-29T08:34:58.131Z,1443515698.131 [CommandLine ThreadHandler](DEBUG): Created PCaller Thread at 403AC4E0
2015-09-29T08:34:58.131Z,1443515698.131 [CommandLine ThreadHandler](INFO): Protected caller Thread ID is 763
2015-09-29T08:34:58.132Z,1443515698.132 [ComponentRegistry](DEBUG): Component "logger" handled in its own thread.
2015-09-29T08:34:58.135Z,1443515698.135 [logger ThreadHandler](DEBUG): Created PCaller Thread at 403DC4E0
2015-09-29T08:34:58.135Z,1443515698.135 [logger ThreadHandler](INFO): Protected caller Thread ID is 764
2015-09-29T08:34:58.137Z,1443515698.137 [ComponentRegistry](DEBUG): SyncComponent "LogSplitter" handled in the control thread.
2015-09-29T08:34:58.138Z,1443515698.138 [Supervisor](INFO): Looking for Config files in directory: Config/
2015-09-29T08:34:58.142Z,1443515698.142 [Supervisor](INFO): Opening Config file at: Config/Control.cfg
2015-09-29T08:34:58.560Z,1443515698.560 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Control
2015-09-29T08:34:58.562Z,1443515698.562 [Supervisor](INFO): Opening Config file at: Config/BIT.cfg
2015-09-29T08:34:58.764Z,1443515698.764 [ComponentRegistry](DEBUG): Loaded Config Component "Config/BIT
2015-09-29T08:34:58.765Z,1443515698.765 [Supervisor](INFO): Opening Config file at: Config/Derivation.cfg
2015-09-29T08:34:58.916Z,1443515698.916 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Derivation
2015-09-29T08:34:58.916Z,1443515698.916 [Supervisor](INFO): Opening Config file at: Config/Estimation.cfg
2015-09-29T08:34:59.068Z,1443515699.068 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Estimation
2015-09-29T08:34:59.069Z,1443515699.069 [Supervisor](INFO): Opening Config file at: Config/Guidance.cfg
2015-09-29T08:34:59.168Z,1443515699.168 [Supervisor](INFO): Opening Config file at: Config/Navigation.cfg
2015-09-29T08:34:59.396Z,1443515699.396 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Navigation
2015-09-29T08:34:59.396Z,1443515699.396 [Supervisor](INFO): Opening Config file at: Config/Sample.cfg
2015-09-29T08:34:59.495Z,1443515699.495 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Sample
2015-09-29T08:34:59.496Z,1443515699.496 [Supervisor](INFO): Opening Config file at: Config/Science.cfg
2015-09-29T08:34:59.822Z,1443515699.822 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Science
2015-09-29T08:34:59.823Z,1443515699.823 [Supervisor](INFO): Opening Config file at: Config/Sensor.cfg
2015-09-29T08:35:00.246Z,1443515700.246 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Sensor
2015-09-29T08:35:00.247Z,1443515700.247 [Supervisor](INFO): Opening Config file at: Config/Servo.cfg
2015-09-29T08:35:00.618Z,1443515700.618 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Servo
2015-09-29T08:35:00.620Z,1443515700.620 [Supervisor](INFO): Opening Config file at: Config/Simulator.cfg
2015-09-29T08:35:01.246Z,1443515701.246 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Simulator
2015-09-29T08:35:01.247Z,1443515701.247 [Supervisor](INFO): Opening Config file at: Config/logger.cfg
2015-09-29T08:35:01.494Z,1443515701.494 [ComponentRegistry](DEBUG): Loaded Config Component "Config/logger
2015-09-29T08:35:01.495Z,1443515701.495 [Supervisor](INFO): Opening Config file at: Config/secure.cfg
2015-09-29T08:35:01.620Z,1443515701.620 [ComponentRegistry](DEBUG): Loaded Config Component "Config/secure
2015-09-29T08:35:01.621Z,1443515701.621 [Supervisor](INFO): Opening Config file at: Config/vehicle.cfg
2015-09-29T08:35:02.189Z,1443515702.189 [ComponentRegistry](DEBUG): Loaded Config Component "Config/vehicle
2015-09-29T08:35:02.189Z,1443515702.189 [Supervisor](INFO): Opening Config file at: Config/workSite.cfg
2015-09-29T08:35:02.320Z,1443515702.320 [ComponentRegistry](DEBUG): Loaded Config Component "Config/workSite
2015-09-29T08:35:02.322Z,1443515702.322 [Supervisor](INFO): Looking for Config files in directory: Config/(none)/
2015-09-29T08:35:02.322Z,1443515702.322 [Supervisor](FAULT): Ignoring configuration overrides from Data/persisted.cfg
2015-09-29T08:35:02.326Z,1443515702.326 [Module Loader](DEBUG): Loading Module at Modules/Control.so
2015-09-29T08:35:02.402Z,1443515702.402 [VerticalControl](DEBUG): Construct VerticalControl.
2015-09-29T08:35:02.542Z,1443515702.542 [VerticalControl] Loaded
2015-09-29T08:35:02.542Z,1443515702.542 [ComponentRegistry](DEBUG): SyncComponent "VerticalControl" handled in the control thread.
2015-09-29T08:35:02.543Z,1443515702.543 [HorizontalControl](DEBUG): Construct HorizontalControl.
2015-09-29T08:35:02.627Z,1443515702.627 [HorizontalControl] Loaded
2015-09-29T08:35:02.627Z,1443515702.627 [ComponentRegistry](DEBUG): SyncComponent "HorizontalControl" handled in the control thread.
2015-09-29T08:35:02.628Z,1443515702.628 [SpeedControl](DEBUG): Construct SpeedControl.
2015-09-29T08:35:02.634Z,1443515702.634 [SpeedControl] Loaded
2015-09-29T08:35:02.634Z,1443515702.634 [ComponentRegistry](DEBUG): SyncComponent "SpeedControl" handled in the control thread.
2015-09-29T08:35:02.635Z,1443515702.635 [LoopControl](DEBUG): Construct LoopControl.
2015-09-29T08:35:02.636Z,1443515702.636 [LoopControl] Loaded
2015-09-29T08:35:02.636Z,1443515702.636 [ComponentRegistry](DEBUG): SyncComponent "LoopControl" handled in the control thread.
2015-09-29T08:35:02.636Z,1443515702.636 [Module Loader](DEBUG): Loaded Module: Control (Contains the Control components, such as Depth, Heading, and Speed Control)
2015-09-29T08:35:02.637Z,1443515702.637 [Module Loader](DEBUG): Loading Module at Modules/BIT.so
2015-09-29T08:35:02.809Z,1443515702.809 [SBIT](DEBUG): Construct Startup Built In Test.
2015-09-29T08:35:02.825Z,1443515702.825 [SBIT] Loaded
2015-09-29T08:35:02.825Z,1443515702.825 [ComponentRegistry](DEBUG): SyncComponent "SBIT" handled in the control thread.
2015-09-29T08:35:02.826Z,1443515702.826 [IBIT](DEBUG): Construct Initiated Built In Test.
2015-09-29T08:35:02.861Z,1443515702.861 [IBIT] Loaded
2015-09-29T08:35:02.861Z,1443515702.861 [ComponentRegistry](DEBUG): SyncComponent "IBIT" handled in the control thread.
2015-09-29T08:35:02.864Z,1443515702.864 [CBIT](DEBUG): Construct Continuous Built In Test.
2015-09-29T08:35:03.021Z,1443515703.021 [CBIT] Loaded
2015-09-29T08:35:03.021Z,1443515703.021 [ComponentRegistry](DEBUG): SyncComponent "CBIT" handled in the control thread.
2015-09-29T08:35:03.021Z,1443515703.021 [Module Loader](DEBUG): Loaded Module: BIT (Contains the BuiltInTest components, such as C Built In Test)
2015-09-29T08:35:03.022Z,1443515703.022 [Module Loader](DEBUG): Loading Module at Modules/Derivation.so
2015-09-29T08:35:03.064Z,1443515703.064 [DepthRateCalculator] Loaded
2015-09-29T08:35:03.065Z,1443515703.065 [ComponentRegistry](DEBUG): SyncComponent "DepthRateCalculator" handled in the control thread.
2015-09-29T08:35:03.074Z,1443515703.074 [PitchRateCalculator] Loaded
2015-09-29T08:35:03.075Z,1443515703.075 [ComponentRegistry](DEBUG): SyncComponent "PitchRateCalculator" handled in the control thread.
2015-09-29T08:35:03.087Z,1443515703.087 [SpeedCalculator] Loaded
2015-09-29T08:35:03.087Z,1443515703.087 [ComponentRegistry](DEBUG): SyncComponent "SpeedCalculator" handled in the control thread.
2015-09-29T08:35:03.105Z,1443515703.105 [TempGradientCalculator] Loaded
2015-09-29T08:35:03.105Z,1443515703.105 [ComponentRegistry](DEBUG): SyncComponent "TempGradientCalculator" handled in the control thread.
2015-09-29T08:35:03.127Z,1443515703.127 [VerticalTemperatureHomogeneityIndexCalculator] Loaded
2015-09-29T08:35:03.128Z,1443515703.128 [ComponentRegistry](DEBUG): SyncComponent "VerticalTemperatureHomogeneityIndexCalculator" handled in the control thread.
2015-09-29T08:35:03.133Z,1443515703.133 [YawRateCalculator] Loaded
2015-09-29T08:35:03.133Z,1443515703.133 [ComponentRegistry](DEBUG): SyncComponent "YawRateCalculator" handled in the control thread.
2015-09-29T08:35:03.134Z,1443515703.134 [Module Loader](DEBUG): Loaded Module: Derivation (Contains the base derivation components)
2015-09-29T08:35:03.135Z,1443515703.135 [Module Loader](DEBUG): Loading Module at Modules/Estimation.so
2015-09-29T08:35:03.255Z,1443515703.255 [StratificationFrontDetector](INFO): threshold set to: 0.399988 degC
2015-09-29T08:35:03.255Z,1443515703.255 [StratificationFrontDetector](DEBUG): (re)initializing
2015-09-29T08:35:03.256Z,1443515703.256 [StratificationFrontDetector] Loaded
2015-09-29T08:35:03.256Z,1443515703.256 [ComponentRegistry](DEBUG): SyncComponent "StratificationFrontDetector" handled in the control thread.
2015-09-29T08:35:03.256Z,1443515703.256 [Module Loader](DEBUG): Loaded Module: Estimation (Contains the base estimation components)
2015-09-29T08:35:03.257Z,1443515703.257 [Module Loader](DEBUG): Loading Module at Modules/Guidance.so
2015-09-29T08:35:03.572Z,1443515703.572 [Module Loader](DEBUG): Loaded Module: Guidance (Contains behaviors and commands)
2015-09-29T08:35:03.573Z,1443515703.573 [Module Loader](DEBUG): Loading Module at Modules/Navigation.so
2015-09-29T08:35:03.710Z,1443515703.710 [DeadReckonUsingMultipleVelocitySources] Loaded
2015-09-29T08:35:03.711Z,1443515703.711 [ComponentRegistry](DEBUG): SyncComponent "DeadReckonUsingMultipleVelocitySources" handled in the control thread.
2015-09-29T08:35:03.774Z,1443515703.774 [DeadReckonUsingSpeedCalculator] Loaded
2015-09-29T08:35:03.774Z,1443515703.774 [ComponentRegistry](DEBUG): SyncComponent "DeadReckonUsingSpeedCalculator" handled in the control thread.
2015-09-29T08:35:03.797Z,1443515703.797 [NavChart] Loaded
2015-09-29T08:35:03.797Z,1443515703.797 [ComponentRegistry](DEBUG): SyncComponent "NavChart" handled in the control thread.
2015-09-29T08:35:03.803Z,1443515703.803 [UniversalFixResidualReporter] Loaded
2015-09-29T08:35:03.803Z,1443515703.803 [ComponentRegistry](DEBUG): SyncComponent "UniversalFixResidualReporter" handled in the control thread.
2015-09-29T08:35:03.803Z,1443515703.803 [Module Loader](DEBUG): Loaded Module: Navigation (Contains the base navigation components)
2015-09-29T08:35:03.804Z,1443515703.804 [Module Loader](DEBUG): Loading Module at Modules/Sample.so
2015-09-29T08:35:03.816Z,1443515703.816 [Module Loader](DEBUG): Loaded Module: Sample (This is a Sample Module of Sample Components)
2015-09-29T08:35:03.817Z,1443515703.817 [Module Loader](DEBUG): Loading Module at Modules/Science.so
2015-09-29T08:35:04.136Z,1443515704.136 [CTD_NeilBrown] Loaded
2015-09-29T08:35:04.136Z,1443515704.136 [ComponentRegistry](DEBUG): Component "CTD_NeilBrown" handled in its own thread.
2015-09-29T08:35:04.139Z,1443515704.139 [CTD_NeilBrown ThreadHandler](DEBUG): Created PCaller Thread at 4059D4E0
2015-09-29T08:35:04.139Z,1443515704.139 [CTD_NeilBrown ThreadHandler](INFO): Protected caller Thread ID is 810
2015-09-29T08:35:04.153Z,1443515704.153 [ISUS] Loaded
2015-09-29T08:35:04.153Z,1443515704.153 [ComponentRegistry](DEBUG): SyncComponent "ISUS" handled in the control thread.
2015-09-29T08:35:04.172Z,1443515704.172 [PAR_Licor] Loaded
2015-09-29T08:35:04.173Z,1443515704.173 [ComponentRegistry](DEBUG): SyncComponent "PAR_Licor" handled in the control thread.
2015-09-29T08:35:04.231Z,1443515704.231 [WetLabsBB2FL] Loaded
2015-09-29T08:35:04.231Z,1443515704.231 [ComponentRegistry](DEBUG): Component "WetLabsBB2FL" handled in its own thread.
2015-09-29T08:35:04.235Z,1443515704.235 [WetLabsBB2FL ThreadHandler](DEBUG): Created PCaller Thread at 405CD4E0
2015-09-29T08:35:04.235Z,1443515704.235 [WetLabsBB2FL ThreadHandler](INFO): Protected caller Thread ID is 811
2015-09-29T08:35:04.236Z,1443515704.236 [Module Loader](DEBUG): Loaded Module: Science (Contains the science components)
2015-09-29T08:35:04.237Z,1443515704.237 [Module Loader](DEBUG): Loading Module at Modules/Sensor.so
2015-09-29T08:35:04.974Z,1443515704.974 [AHRS_sp3003D] Loaded
2015-09-29T08:35:04.975Z,1443515704.975 [ComponentRegistry](DEBUG): SyncComponent "AHRS_sp3003D" handled in the control thread.
2015-09-29T08:35:05.172Z,1443515705.172 [DataOverHttps] Loaded
2015-09-29T08:35:05.172Z,1443515705.172 [ComponentRegistry](DEBUG): SyncComponent "DataOverHttps" handled in the control thread.
2015-09-29T08:35:05.187Z,1443515705.187 [Depth_Keller] Loaded
2015-09-29T08:35:05.191Z,1443515705.191 [ComponentRegistry](DEBUG): SyncComponent "Depth_Keller" handled in the control thread.
2015-09-29T08:35:05.196Z,1443515705.196 [DropWeight] Loaded
2015-09-29T08:35:05.197Z,1443515705.197 [ComponentRegistry](DEBUG): SyncComponent "DropWeight" handled in the control thread.
2015-09-29T08:35:05.360Z,1443515705.360 [DVL_micro] Loaded
2015-09-29T08:35:05.360Z,1443515705.360 [ComponentRegistry](DEBUG): SyncComponent "DVL_micro" handled in the control thread.
2015-09-29T08:35:05.470Z,1443515705.470 [NAL9602] Loaded
2015-09-29T08:35:05.470Z,1443515705.470 [ComponentRegistry](DEBUG): SyncComponent "NAL9602" handled in the control thread.
2015-09-29T08:35:05.523Z,1443515705.523 [Onboard] Loaded
2015-09-29T08:35:05.523Z,1443515705.523 [ComponentRegistry](DEBUG): SyncComponent "Onboard" handled in the control thread.
2015-09-29T08:35:05.536Z,1443515705.536 [Radio_Surface] Loaded
2015-09-29T08:35:05.536Z,1443515705.536 [ComponentRegistry](DEBUG): Component "Radio_Surface" handled in its own thread.
2015-09-29T08:35:05.539Z,1443515705.539 [Radio_Surface ThreadHandler](DEBUG): Created PCaller Thread at 408114E0
2015-09-29T08:35:05.539Z,1443515705.539 [Radio_Surface ThreadHandler](INFO): Protected caller Thread ID is 812
2015-09-29T08:35:05.706Z,1443515705.706 [DAT] Loaded
2015-09-29T08:35:05.707Z,1443515705.707 [ComponentRegistry](DEBUG): SyncComponent "DAT" handled in the control thread.
2015-09-29T08:35:05.713Z,1443515705.713 [SCPI] Loaded
2015-09-29T08:35:05.714Z,1443515705.714 [ComponentRegistry](DEBUG): SyncComponent "SCPI" handled in the control thread.
2015-09-29T08:35:05.714Z,1443515705.714 [Module Loader](DEBUG): Loaded Module: Sensor (Contains the sensor components)
2015-09-29T08:35:05.715Z,1443515705.715 [Module Loader](DEBUG): Loading Module at Modules/Servo.so
2015-09-29T08:35:05.854Z,1443515705.854 [BuoyancyServo] Loaded
2015-09-29T08:35:05.854Z,1443515705.854 [ComponentRegistry](DEBUG): SyncComponent "BuoyancyServo" handled in the control thread.
2015-09-29T08:35:05.871Z,1443515705.871 [ElevatorServo] Loaded
2015-09-29T08:35:05.872Z,1443515705.872 [ComponentRegistry](DEBUG): SyncComponent "ElevatorServo" handled in the control thread.
2015-09-29T08:35:05.884Z,1443515705.884 [MassServo] Loaded
2015-09-29T08:35:05.884Z,1443515705.884 [ComponentRegistry](DEBUG): SyncComponent "MassServo" handled in the control thread.
2015-09-29T08:35:05.896Z,1443515705.896 [RudderServo] Loaded
2015-09-29T08:35:05.896Z,1443515705.896 [ComponentRegistry](DEBUG): SyncComponent "RudderServo" handled in the control thread.
2015-09-29T08:35:05.912Z,1443515705.912 [ThrusterServo] Loaded
2015-09-29T08:35:05.913Z,1443515705.913 [ComponentRegistry](DEBUG): SyncComponent "ThrusterServo" handled in the control thread.
2015-09-29T08:35:05.913Z,1443515705.913 [Module Loader](DEBUG): Loaded Module: Servo (This is the module containing motor controllers)
2015-09-29T08:35:05.914Z,1443515705.914 [Module Loader](DEBUG): Loading Module at Modules/Simulator.so
2015-09-29T08:35:06.128Z,1443515706.128 [InternalSim] Loaded
2015-09-29T08:35:06.129Z,1443515706.129 [ComponentRegistry](DEBUG): SyncComponent "InternalSim" handled in the control thread.
2015-09-29T08:35:06.129Z,1443515706.129 [Module Loader](DEBUG): Loaded Module: Simulator (This is the module containing the Simulator)
2015-09-29T08:35:06.130Z,1443515706.130 [Module Loader](DEBUG): Loading Module at Modules/Trigger.so
2015-09-29T08:35:06.175Z,1443515706.175 [Module Loader](DEBUG): Loaded Module: Trigger (Contains triggers for use in missions)
2015-09-29T08:35:06.179Z,1443515706.179 [ComponentRegistry](DEBUG): SyncComponent "MissionManager" handled in the control thread.
2015-09-29T08:35:06.180Z,1443515706.180 [ComponentRegistry](DEBUG): SyncComponent "Reporter" handled in the control thread.
2015-09-29T08:35:06.191Z,1443515706.191 [ComponentRegistry](DEBUG): Component "NavChartDb" handled in its own thread.
2015-09-29T08:35:06.195Z,1443515706.195 [NavChartDb ThreadHandler](DEBUG): Created PCaller Thread at 408BF4E0
2015-09-29T08:35:06.195Z,1443515706.195 [NavChartDb ThreadHandler](INFO): Protected caller Thread ID is 813
2015-09-29T08:35:06.200Z,1443515706.200 [Supervisor](INFO): Main Thread ID is 760
2015-09-29T08:35:06.200Z,1443515706.200 [Supervisor](DEBUG): Running supervisor.
2015-09-29T08:35:06.201Z,1443515706.201 [CommandLine ThreadHandler](INFO): Handler Thread ID is 814
2015-09-29T08:35:06.207Z,1443515706.207 [controlThread ThreadHandler](INFO): Handler Thread ID is 815
2015-09-29T08:35:06.208Z,1443515706.208 [controlThread](DEBUG): Initializing ControlThread
2015-09-29T08:35:06.209Z,1443515706.209 [VerticalControl](DEBUG): Initialize VerticalControlComponent.
2015-09-29T08:35:06.211Z,1443515706.211 [HorizontalControl](DEBUG): Initialize HorizontalControlComponent.
2015-09-29T08:35:06.211Z,1443515706.211 [SpeedControl](DEBUG): Initialize SpeedControlComponent.
2015-09-29T08:35:06.212Z,1443515706.212 [LoopControl](DEBUG): Initialize LoopControlComponent.
2015-09-29T08:35:06.212Z,1443515706.212 [SBIT](INFO): Initialize SBIT Component.
2015-09-29T08:35:06.213Z,1443515706.213 [SBIT](IMPORTANT): Tethys CM Info: SVN revision:12634
2015-09-29T08:35:06.214Z,1443515706.214 [SBIT](INFO): Kernel Reporting Different Release From Configuration.
Kernel Expected: 2.6.32-45-generic-pae
Kernel Reported: 2.6.27.8
2015-09-29T08:35:06.215Z,1443515706.215 [SBIT](INFO): Kernel Reporting Different Version From Configuration.
Kernel Expected: #102-Ubuntu SMP Wed Jan 2 22:10:16 UTC 2013
Kernel Reported: #641 PREEMPT Mon Sep 28 16:45:10 PDT 2015
2015-09-29T08:35:06.215Z,1443515706.215 [SBIT](INFO): Beginning SBIT in 20.000000 seconds.
2015-09-29T08:35:06.216Z,1443515706.216 [IBIT](INFO): Initialize IBIT Component.
2015-09-29T08:35:06.217Z,1443515706.217 [CBIT](DEBUG): Initialize CBIT Component.
2015-09-29T08:35:06.217Z,1443515706.217 [CBIT](FAULT): LAST RESTART WAS UNINTENTIONAL.
2015-09-29T08:35:06.217Z,1443515706.217 [CBIT](INFO): Last reboot was NOT due to watchdog timer.
2015-09-29T08:35:06.218Z,1443515706.218 [DepthRateCalculator](DEBUG): Initializing DepthRateCalculator.
2015-09-29T08:35:06.218Z,1443515706.218 [PitchRateCalculator](DEBUG): Initializing PitchRateCalculator.
2015-09-29T08:35:06.218Z,1443515706.218 [SpeedCalculator](DEBUG): Initializing SpeedCalculator.
2015-09-29T08:35:06.218Z,1443515706.218 [TempGradientCalculator](DEBUG): Initializing TempGradientCalculator.
2015-09-29T08:35:06.219Z,1443515706.219 [VerticalTemperatureHomogeneityIndexCalculator](DEBUG): (re)initializing
2015-09-29T08:35:06.220Z,1443515706.220 [YawRateCalculator](DEBUG): Initializing YawRateCalculator.
2015-09-29T08:35:06.220Z,1443515706.220 [DeadReckonUsingMultipleVelocitySources](DEBUG): Initializing DeadReckonUsingMultipleVelocitySources component.
2015-09-29T08:35:06.221Z,1443515706.221 [DeadReckonUsingMultipleVelocitySources](INFO): Will consider orientation measurement stale after 120s.
2015-09-29T08:35:06.221Z,1443515706.221 [DeadReckonUsingMultipleVelocitySources](INFO): Will consider velocity measurement stale after 20s.
2015-09-29T08:35:06.222Z,1443515706.222 [DeadReckonUsingSpeedCalculator](DEBUG): Initializing DeadReckonUsingSpeedCalculator component.
2015-09-29T08:35:06.222Z,1443515706.222 [DeadReckonUsingSpeedCalculator](INFO): Will consider orientation measurement stale after 120s.
2015-09-29T08:35:06.222Z,1443515706.222 [DeadReckonUsingSpeedCalculator](INFO): Will consider velocity measurement stale after 20s.
2015-09-29T08:35:06.223Z,1443515706.223 [NavChart](DEBUG): Initialize NavChart Navigation.
2015-09-29T08:35:06.223Z,1443515706.223 [UniversalFixResidualReporter](DEBUG): Initializing UniversalFixResidualReporter component.
2015-09-29T08:35:06.229Z,1443515706.229 [InternalSim](DEBUG):  InternalSim initializing...
2015-09-29T08:35:06.263Z,1443515706.263 [logger ThreadHandler](INFO): Handler Thread ID is 816
2015-09-29T08:35:06.399Z,1443515706.399 [CTD_NeilBrown ThreadHandler](INFO): Handler Thread ID is 817
2015-09-29T08:35:06.407Z,1443515706.407 [MissionManager](INFO): Loading Mission: Missions/Startup.xml
2015-09-29T08:35:06.428Z,1443515706.428 [WetLabsBB2FL ThreadHandler](INFO): Handler Thread ID is 818
2015-09-29T08:35:06.433Z,1443515706.433 [Radio_Surface ThreadHandler](INFO): Handler Thread ID is 819
2015-09-29T08:35:06.455Z,1443515706.455 [Startup:A.GoToSurface](DEBUG): Construct GoToSurface.
2015-09-29T08:35:06.459Z,1443515706.459 [NavChartDb ThreadHandler](INFO): Handler Thread ID is 820
2015-09-29T08:35:06.477Z,1443515706.477 [NavChartDb](INFO): Looking for Electronic Nav Chart files in directory: Resources
2015-09-29T08:35:06.479Z,1443515706.479 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US1WC07M.000
2015-09-29T08:35:06.480Z,1443515706.480 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US2WC11M.000
2015-09-29T08:35:06.480Z,1443515706.480 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US3CA52M.000
2015-09-29T08:35:06.480Z,1443515706.480 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US4CA60M.000
2015-09-29T08:35:06.480Z,1443515706.480 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA50M.000
2015-09-29T08:35:06.481Z,1443515706.481 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA61M.000
2015-09-29T08:35:06.481Z,1443515706.481 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA62M.000
2015-09-29T08:35:06.481Z,1443515706.481 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA83M.000
2015-09-29T08:35:06.523Z,1443515706.523 [MissionManager](DEBUG): 
<?xml version="1.0" encoding="UTF-8"?>
<Mission xmlns="Tethys"
       xmlns:Control="Tethys/Control"
       xmlns:Guidance="Tethys/Guidance" 
       xmlns:Units="Tethys/Units"
       xmlns:Universal="Tethys/Universal"
       xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
       xsi:schemaLocation="Tethys http://okeanids.mbari.org/tethys/Xml/Tethys.xsd
                           Tethys/Control http://okeanids.mbari.org/tethys/Xml/Control.xsd
                           Tethys/Guidance http://okeanids.mbari.org/tethys/Xml/Guidance.xsd
                           Tethys/Units http://okeanids.mbari.org/tethys/Xml/Units.xsd
                           Tethys/Universal http://okeanids.mbari.org/tethys/Xml/Universal.xsd"
       Id="Startup">

    <Guidance:GoToSurface>
        <Progression/>
    </Guidance:GoToSurface>

    <Aggregate Id="StartupSatComms">

        <Sequence/>

        <ReadDatum>
            <Timeout Duration="P1M" />
            <Universal:latitude_fix/>
        </ReadDatum>

        <ReadDatum>
            <Timeout Duration="P1M" />
            <Universal:platform_communications/>
        </ReadDatum>

    </Aggregate>

</Mission>


2015-09-29T08:35:06.524Z,1443515706.524 [MissionManager](INFO): Loading Mission: Missions/Default.xml
2015-09-29T08:35:06.598Z,1443515706.598 [MissionManager](INFO): DefineArg Default.ElapsedSinceDefaultStarted = 0.000000 min
2015-09-29T08:35:06.600Z,1443515706.600 [Default:A.GoToSurface](DEBUG): Construct GoToSurface.
2015-09-29T08:35:06.630Z,1443515706.630 [Default:CheckIn:Read_Iridium:A_Timeout:A.Execute](DEBUG): Construct Execute.
2015-09-29T08:35:06.648Z,1443515706.648 [Default:CheckIn:C.Wait](DEBUG): Construct Wait.
2015-09-29T08:35:06.680Z,1443515706.680 [Default:D.Execute](DEBUG): Construct Execute.
2015-09-29T08:35:06.683Z,1443515706.683 [MissionManager](DEBUG): 
<?xml version="1.0" encoding="UTF-8"?>
<Mission xmlns="Tethys"
xmlns:Guidance="Tethys/Guidance"
xmlns:Units="Tethys/Units"
xmlns:Universal="Tethys/Universal"
xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
xsi:schemaLocation="Tethys http://okeanids.mbari.org/tethys/Xml/Tethys.xsd
Tethys/Guidance http://okeanids.mbari.org/tethys/Xml/Guidance.xsd
Tethys/Units http://okeanids.mbari.org/tethys/Xml/Units.xsd
Tethys/Universal http://okeanids.mbari.org/tethys/Xml/Universal.xsd"
Id="Default">

    <DefineArg Name="ElapsedSinceDefaultStarted"><Units:minute/><Value>0</Value></DefineArg>

    <Guidance:GoToSurface>
        <Progression/>
    </Guidance:GoToSurface>

    <Aggregate Id="CheckIn">

        <Sequence Repeat="288"/>

        <ReadDatum Id="Read_GPS">
            <Sequence/>
            <Timeout Duration="P5M"/>
            <Universal:time_fix/>
        </ReadDatum>

        <ReadDatum Id="Read_Iridium">
            <Sequence/>
            <Timeout Duration="P2H">
                <Guidance:Execute>
                    <Sequence/>
                    <Setting><Guidance:Execute.command/><String>Burn 300</String></Setting>
                </Guidance:Execute>
                <Syslog Severity="Critical">Dropped weight due to communications timeout.</Syslog>
            </Timeout>
            <Universal:platform_communications/>
        </ReadDatum>

        <Guidance:Wait>
            <Sequence/>
            <Setting><Guidance:Wait.duration/><Units:minute/><Value>5</Value></Setting>
        </Guidance:Wait>

        <Assign><Sequence/><Arg Name="ElapsedSinceDefaultStarted"/><Elapsed><Universal:mission_started/></Elapsed></Assign>

        <Syslog Severity="Important">Default mission has been running for <Arg Name="ElapsedSinceDefaultStarted"/><Units:minute/></Syslog>

    </Aggregate>

    <Syslog Severity="Important">Restarting logs and Default mission.</Syslog>

    <Guidance:Execute>
        <Sequence/>
        <Setting><Guidance:Execute.command/><String>restart logs</String></Setting>
    </Guidance:Execute>

</Mission>


2015-09-29T08:35:06.696Z,1443515706.696 [controlThread](DEBUG): Component order: CycleStarter,InternalSim,ISUS,PAR_Licor,AHRS_sp3003D,DataOverHttps,Depth_Keller,DropWeight,DVL_micro,NAL9602,Onboard,DAT,SCPI,PAR_Licor,Depth_Keller,DepthRateCalculator,PitchRateCalculator,SpeedCalculator,TempGradientCalculator,VerticalTemperatureHomogeneityIndexCalculator,YawRateCalculator,StratificationFrontDetector,DeadReckonUsingMultipleVelocitySources,DeadReckonUsingSpeedCalculator,NavChart,UniversalFixResidualReporter,MissionManager,VerticalControl,HorizontalControl,SpeedControl,LoopControl,BuoyancyServo,ElevatorServo,MassServo,RudderServo,ThrusterServo,SBIT,IBIT,CBIT,Reporter,LogSplitter,
2015-09-29T08:35:06.956Z,1443515706.956 [DVL_micro](INFO): Initializing
2015-09-29T08:35:07.123Z,1443515707.123 [DeadReckonUsingMultipleVelocitySources](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T08:35:07.135Z,1443515707.135 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T08:35:07.247Z,1443515707.247 [BuoyancyServo](DEBUG): Initializing BuoyancyServo.
2015-09-29T08:35:07.261Z,1443515707.261 [ElevatorServo](DEBUG): Initializing ElevatorServo.
2015-09-29T08:35:07.275Z,1443515707.275 [MassServo](DEBUG): Initializing MassServo.
2015-09-29T08:35:07.304Z,1443515707.304 [RudderServo](DEBUG): Initializing RudderServo.
2015-09-29T08:35:07.309Z,1443515707.309 [ThrusterServo](DEBUG): Initializing ThrusterServo.
2015-09-29T08:35:07.560Z,1443515707.560 [DeadReckonUsingMultipleVelocitySources](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T08:35:07.561Z,1443515707.561 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T08:35:16.592Z,1443515716.592 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T08:35:16.925Z,1443515716.925 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T08:35:17.100Z,1443515717.100 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T08:35:17.483Z,1443515717.483 [DataOverHttps](INFO): setting available, lastComms_.elapsed()=0.003100
2015-09-29T08:35:17.486Z,1443515717.486 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T08:35:17.877Z,1443515717.877 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T08:35:18.276Z,1443515718.276 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T08:35:18.676Z,1443515718.676 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T08:35:19.075Z,1443515719.075 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T08:35:19.477Z,1443515719.477 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T08:35:19.881Z,1443515719.881 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T08:35:20.282Z,1443515720.282 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T08:35:20.681Z,1443515720.681 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T08:35:21.085Z,1443515721.085 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T08:35:21.482Z,1443515721.482 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T08:35:21.880Z,1443515721.880 [NAL9602](INFO): No messages in MT queue
2015-09-29T08:35:21.881Z,1443515721.881 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T08:35:22.281Z,1443515722.281 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T08:35:22.680Z,1443515722.680 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T08:35:23.083Z,1443515723.083 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T08:35:23.481Z,1443515723.481 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T08:35:23.881Z,1443515723.881 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T08:35:24.281Z,1443515724.281 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T08:35:24.681Z,1443515724.681 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T08:35:25.076Z,1443515725.076 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T08:35:25.476Z,1443515725.476 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T08:35:25.875Z,1443515725.875 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T08:35:26.275Z,1443515726.275 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T08:35:26.676Z,1443515726.676 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T08:35:26.710Z,1443515726.710 [SBIT](IMPORTANT): Beginning Startup BIT
2015-09-29T08:35:27.076Z,1443515727.076 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T08:35:27.476Z,1443515727.476 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T08:35:27.876Z,1443515727.876 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T08:35:28.278Z,1443515728.278 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T08:35:28.724Z,1443515728.724 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T08:35:29.076Z,1443515729.076 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T08:35:29.477Z,1443515729.477 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T08:35:29.876Z,1443515729.876 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T08:35:30.276Z,1443515730.276 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T08:35:30.676Z,1443515730.676 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T08:35:31.076Z,1443515731.076 [D