2015-09-29T08:19:12.004Z,1443514752.004 [Supervisor](DEBUG): Initializing supervisor.
2015-09-29T08:19:12.008Z,1443514752.008 [SyncHandler](DEBUG): Created PCaller Thread at 4034C4E0
2015-09-29T08:19:12.008Z,1443514752.008 [SyncHandler](INFO): Protected caller Thread ID is 761
2015-09-29T08:19:12.009Z,1443514752.009 [ComponentRegistry](DEBUG): Component "controlThread" handled in its own thread.
2015-09-29T08:19:12.011Z,1443514752.011 [controlThread ThreadHandler](DEBUG): Created PCaller Thread at 4037C4E0
2015-09-29T08:19:12.012Z,1443514752.012 [controlThread ThreadHandler](INFO): Protected caller Thread ID is 762
2015-09-29T08:19:12.015Z,1443514752.015 [ComponentRegistry](DEBUG): SyncComponent "CycleStarter" handled in the control thread.
2015-09-29T08:19:12.027Z,1443514752.027 [ComponentRegistry](DEBUG): Component "CommandLine" handled in its own thread.
2015-09-29T08:19:12.031Z,1443514752.031 [CommandLine ThreadHandler](DEBUG): Created PCaller Thread at 403AC4E0
2015-09-29T08:19:12.032Z,1443514752.032 [CommandLine ThreadHandler](INFO): Protected caller Thread ID is 763
2015-09-29T08:19:12.033Z,1443514752.033 [ComponentRegistry](DEBUG): Component "logger" handled in its own thread.
2015-09-29T08:19:12.035Z,1443514752.035 [logger ThreadHandler](DEBUG): Created PCaller Thread at 403DC4E0
2015-09-29T08:19:12.036Z,1443514752.036 [logger ThreadHandler](INFO): Protected caller Thread ID is 764
2015-09-29T08:19:12.038Z,1443514752.038 [ComponentRegistry](DEBUG): SyncComponent "LogSplitter" handled in the control thread.
2015-09-29T08:19:12.038Z,1443514752.038 [Supervisor](INFO): Looking for Config files in directory: Config/
2015-09-29T08:19:12.042Z,1443514752.042 [Supervisor](INFO): Opening Config file at: Config/Control.cfg
2015-09-29T08:19:12.437Z,1443514752.437 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Control
2015-09-29T08:19:12.439Z,1443514752.439 [Supervisor](INFO): Opening Config file at: Config/BIT.cfg
2015-09-29T08:19:12.632Z,1443514752.632 [ComponentRegistry](DEBUG): Loaded Config Component "Config/BIT
2015-09-29T08:19:12.634Z,1443514752.634 [Supervisor](INFO): Opening Config file at: Config/Derivation.cfg
2015-09-29T08:19:12.776Z,1443514752.776 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Derivation
2015-09-29T08:19:12.777Z,1443514752.777 [Supervisor](INFO): Opening Config file at: Config/Estimation.cfg
2015-09-29T08:19:12.924Z,1443514752.924 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Estimation
2015-09-29T08:19:12.925Z,1443514752.925 [Supervisor](INFO): Opening Config file at: Config/Guidance.cfg
2015-09-29T08:19:13.023Z,1443514753.023 [Supervisor](INFO): Opening Config file at: Config/Navigation.cfg
2015-09-29T08:19:13.245Z,1443514753.245 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Navigation
2015-09-29T08:19:13.245Z,1443514753.245 [Supervisor](INFO): Opening Config file at: Config/Sample.cfg
2015-09-29T08:19:13.343Z,1443514753.343 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Sample
2015-09-29T08:19:13.344Z,1443514753.344 [Supervisor](INFO): Opening Config file at: Config/Science.cfg
2015-09-29T08:19:13.657Z,1443514753.657 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Science
2015-09-29T08:19:13.657Z,1443514753.657 [Supervisor](INFO): Opening Config file at: Config/Sensor.cfg
2015-09-29T08:19:14.057Z,1443514754.057 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Sensor
2015-09-29T08:19:14.057Z,1443514754.057 [Supervisor](INFO): Opening Config file at: Config/Servo.cfg
2015-09-29T08:19:14.409Z,1443514754.409 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Servo
2015-09-29T08:19:14.411Z,1443514754.411 [Supervisor](INFO): Opening Config file at: Config/Simulator.cfg
2015-09-29T08:19:15.005Z,1443514755.005 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Simulator
2015-09-29T08:19:15.006Z,1443514755.006 [Supervisor](INFO): Opening Config file at: Config/logger.cfg
2015-09-29T08:19:15.237Z,1443514755.237 [ComponentRegistry](DEBUG): Loaded Config Component "Config/logger
2015-09-29T08:19:15.237Z,1443514755.237 [Supervisor](INFO): Opening Config file at: Config/secure.cfg
2015-09-29T08:19:15.356Z,1443514755.356 [ComponentRegistry](DEBUG): Loaded Config Component "Config/secure
2015-09-29T08:19:15.357Z,1443514755.357 [Supervisor](INFO): Opening Config file at: Config/vehicle.cfg
2015-09-29T08:19:15.871Z,1443514755.871 [ComponentRegistry](DEBUG): Loaded Config Component "Config/vehicle
2015-09-29T08:19:15.872Z,1443514755.872 [Supervisor](INFO): Opening Config file at: Config/workSite.cfg
2015-09-29T08:19:16.037Z,1443514756.037 [ComponentRegistry](DEBUG): Loaded Config Component "Config/workSite
2015-09-29T08:19:16.039Z,1443514756.039 [Supervisor](INFO): Looking for Config files in directory: Config/(none)/
2015-09-29T08:19:16.039Z,1443514756.039 [Supervisor](FAULT): Ignoring configuration overrides from Data/persisted.cfg
2015-09-29T08:19:16.044Z,1443514756.044 [Module Loader](DEBUG): Loading Module at Modules/Control.so
2015-09-29T08:19:16.117Z,1443514756.117 [VerticalControl](DEBUG): Construct VerticalControl.
2015-09-29T08:19:16.253Z,1443514756.253 [VerticalControl] Loaded
2015-09-29T08:19:16.254Z,1443514756.254 [ComponentRegistry](DEBUG): SyncComponent "VerticalControl" handled in the control thread.
2015-09-29T08:19:16.254Z,1443514756.254 [HorizontalControl](DEBUG): Construct HorizontalControl.
2015-09-29T08:19:16.336Z,1443514756.336 [HorizontalControl] Loaded
2015-09-29T08:19:16.336Z,1443514756.336 [ComponentRegistry](DEBUG): SyncComponent "HorizontalControl" handled in the control thread.
2015-09-29T08:19:16.337Z,1443514756.337 [SpeedControl](DEBUG): Construct SpeedControl.
2015-09-29T08:19:16.343Z,1443514756.343 [SpeedControl] Loaded
2015-09-29T08:19:16.343Z,1443514756.343 [ComponentRegistry](DEBUG): SyncComponent "SpeedControl" handled in the control thread.
2015-09-29T08:19:16.348Z,1443514756.348 [LoopControl](DEBUG): Construct LoopControl.
2015-09-29T08:19:16.348Z,1443514756.348 [LoopControl] Loaded
2015-09-29T08:19:16.349Z,1443514756.349 [ComponentRegistry](DEBUG): SyncComponent "LoopControl" handled in the control thread.
2015-09-29T08:19:16.349Z,1443514756.349 [Module Loader](DEBUG): Loaded Module: Control (Contains the Control components, such as Depth, Heading, and Speed Control)
2015-09-29T08:19:16.350Z,1443514756.350 [Module Loader](DEBUG): Loading Module at Modules/BIT.so
2015-09-29T08:19:16.510Z,1443514756.510 [SBIT](DEBUG): Construct Startup Built In Test.
2015-09-29T08:19:16.522Z,1443514756.522 [SBIT] Loaded
2015-09-29T08:19:16.522Z,1443514756.522 [ComponentRegistry](DEBUG): SyncComponent "SBIT" handled in the control thread.
2015-09-29T08:19:16.523Z,1443514756.523 [IBIT](DEBUG): Construct Initiated Built In Test.
2015-09-29T08:19:16.557Z,1443514756.557 [IBIT] Loaded
2015-09-29T08:19:16.557Z,1443514756.557 [ComponentRegistry](DEBUG): SyncComponent "IBIT" handled in the control thread.
2015-09-29T08:19:16.560Z,1443514756.560 [CBIT](DEBUG): Construct Continuous Built In Test.
2015-09-29T08:19:16.715Z,1443514756.715 [CBIT] Loaded
2015-09-29T08:19:16.715Z,1443514756.715 [ComponentRegistry](DEBUG): SyncComponent "CBIT" handled in the control thread.
2015-09-29T08:19:16.716Z,1443514756.716 [Module Loader](DEBUG): Loaded Module: BIT (Contains the BuiltInTest components, such as C Built In Test)
2015-09-29T08:19:16.717Z,1443514756.717 [Module Loader](DEBUG): Loading Module at Modules/Derivation.so
2015-09-29T08:19:16.758Z,1443514756.758 [DepthRateCalculator] Loaded
2015-09-29T08:19:16.758Z,1443514756.758 [ComponentRegistry](DEBUG): SyncComponent "DepthRateCalculator" handled in the control thread.
2015-09-29T08:19:16.763Z,1443514756.763 [PitchRateCalculator] Loaded
2015-09-29T08:19:16.764Z,1443514756.764 [ComponentRegistry](DEBUG): SyncComponent "PitchRateCalculator" handled in the control thread.
2015-09-29T08:19:16.775Z,1443514756.775 [SpeedCalculator] Loaded
2015-09-29T08:19:16.776Z,1443514756.776 [ComponentRegistry](DEBUG): SyncComponent "SpeedCalculator" handled in the control thread.
2015-09-29T08:19:16.797Z,1443514756.797 [TempGradientCalculator] Loaded
2015-09-29T08:19:16.798Z,1443514756.798 [ComponentRegistry](DEBUG): SyncComponent "TempGradientCalculator" handled in the control thread.
2015-09-29T08:19:16.815Z,1443514756.815 [VerticalTemperatureHomogeneityIndexCalculator] Loaded
2015-09-29T08:19:16.816Z,1443514756.816 [ComponentRegistry](DEBUG): SyncComponent "VerticalTemperatureHomogeneityIndexCalculator" handled in the control thread.
2015-09-29T08:19:16.821Z,1443514756.821 [YawRateCalculator] Loaded
2015-09-29T08:19:16.821Z,1443514756.821 [ComponentRegistry](DEBUG): SyncComponent "YawRateCalculator" handled in the control thread.
2015-09-29T08:19:16.822Z,1443514756.822 [Module Loader](DEBUG): Loaded Module: Derivation (Contains the base derivation components)
2015-09-29T08:19:16.822Z,1443514756.822 [Module Loader](DEBUG): Loading Module at Modules/Estimation.so
2015-09-29T08:19:16.942Z,1443514756.942 [StratificationFrontDetector](INFO): threshold set to: 0.399988 degC
2015-09-29T08:19:16.942Z,1443514756.942 [StratificationFrontDetector](DEBUG): (re)initializing
2015-09-29T08:19:16.942Z,1443514756.942 [StratificationFrontDetector] Loaded
2015-09-29T08:19:16.942Z,1443514756.942 [ComponentRegistry](DEBUG): SyncComponent "StratificationFrontDetector" handled in the control thread.
2015-09-29T08:19:16.943Z,1443514756.943 [Module Loader](DEBUG): Loaded Module: Estimation (Contains the base estimation components)
2015-09-29T08:19:16.944Z,1443514756.944 [Module Loader](DEBUG): Loading Module at Modules/Guidance.so
2015-09-29T08:19:17.236Z,1443514757.236 [Module Loader](DEBUG): Loaded Module: Guidance (Contains behaviors and commands)
2015-09-29T08:19:17.237Z,1443514757.237 [Module Loader](DEBUG): Loading Module at Modules/Navigation.so
2015-09-29T08:19:17.367Z,1443514757.367 [DeadReckonUsingMultipleVelocitySources] Loaded
2015-09-29T08:19:17.367Z,1443514757.367 [ComponentRegistry](DEBUG): SyncComponent "DeadReckonUsingMultipleVelocitySources" handled in the control thread.
2015-09-29T08:19:17.432Z,1443514757.432 [DeadReckonUsingSpeedCalculator] Loaded
2015-09-29T08:19:17.432Z,1443514757.432 [ComponentRegistry](DEBUG): SyncComponent "DeadReckonUsingSpeedCalculator" handled in the control thread.
2015-09-29T08:19:17.454Z,1443514757.454 [NavChart] Loaded
2015-09-29T08:19:17.455Z,1443514757.455 [ComponentRegistry](DEBUG): SyncComponent "NavChart" handled in the control thread.
2015-09-29T08:19:17.460Z,1443514757.460 [UniversalFixResidualReporter] Loaded
2015-09-29T08:19:17.460Z,1443514757.460 [ComponentRegistry](DEBUG): SyncComponent "UniversalFixResidualReporter" handled in the control thread.
2015-09-29T08:19:17.461Z,1443514757.461 [Module Loader](DEBUG): Loaded Module: Navigation (Contains the base navigation components)
2015-09-29T08:19:17.461Z,1443514757.461 [Module Loader](DEBUG): Loading Module at Modules/Sample.so
2015-09-29T08:19:17.470Z,1443514757.470 [Module Loader](DEBUG): Loaded Module: Sample (This is a Sample Module of Sample Components)
2015-09-29T08:19:17.471Z,1443514757.471 [Module Loader](DEBUG): Loading Module at Modules/Science.so
2015-09-29T08:19:17.769Z,1443514757.769 [CTD_NeilBrown] Loaded
2015-09-29T08:19:17.769Z,1443514757.769 [ComponentRegistry](DEBUG): Component "CTD_NeilBrown" handled in its own thread.
2015-09-29T08:19:17.772Z,1443514757.772 [CTD_NeilBrown ThreadHandler](DEBUG): Created PCaller Thread at 4059D4E0
2015-09-29T08:19:17.772Z,1443514757.772 [CTD_NeilBrown ThreadHandler](INFO): Protected caller Thread ID is 810
2015-09-29T08:19:17.785Z,1443514757.785 [ISUS] Loaded
2015-09-29T08:19:17.785Z,1443514757.785 [ComponentRegistry](DEBUG): SyncComponent "ISUS" handled in the control thread.
2015-09-29T08:19:17.800Z,1443514757.800 [PAR_Licor] Loaded
2015-09-29T08:19:17.800Z,1443514757.800 [ComponentRegistry](DEBUG): SyncComponent "PAR_Licor" handled in the control thread.
2015-09-29T08:19:17.860Z,1443514757.860 [WetLabsBB2FL] Loaded
2015-09-29T08:19:17.861Z,1443514757.861 [ComponentRegistry](DEBUG): Component "WetLabsBB2FL" handled in its own thread.
2015-09-29T08:19:17.863Z,1443514757.863 [WetLabsBB2FL ThreadHandler](DEBUG): Created PCaller Thread at 405CD4E0
2015-09-29T08:19:17.864Z,1443514757.864 [WetLabsBB2FL ThreadHandler](INFO): Protected caller Thread ID is 811
2015-09-29T08:19:17.864Z,1443514757.864 [Module Loader](DEBUG): Loaded Module: Science (Contains the science components)
2015-09-29T08:19:17.865Z,1443514757.865 [Module Loader](DEBUG): Loading Module at Modules/Sensor.so
2015-09-29T08:19:18.596Z,1443514758.596 [AHRS_sp3003D] Loaded
2015-09-29T08:19:18.596Z,1443514758.596 [ComponentRegistry](DEBUG): SyncComponent "AHRS_sp3003D" handled in the control thread.
2015-09-29T08:19:18.790Z,1443514758.790 [DataOverHttps] Loaded
2015-09-29T08:19:18.790Z,1443514758.790 [ComponentRegistry](DEBUG): SyncComponent "DataOverHttps" handled in the control thread.
2015-09-29T08:19:18.804Z,1443514758.804 [Depth_Keller] Loaded
2015-09-29T08:19:18.804Z,1443514758.804 [ComponentRegistry](DEBUG): SyncComponent "Depth_Keller" handled in the control thread.
2015-09-29T08:19:18.809Z,1443514758.809 [DropWeight] Loaded
2015-09-29T08:19:18.809Z,1443514758.809 [ComponentRegistry](DEBUG): SyncComponent "DropWeight" handled in the control thread.
2015-09-29T08:19:18.966Z,1443514758.966 [DVL_micro] Loaded
2015-09-29T08:19:18.966Z,1443514758.966 [ComponentRegistry](DEBUG): SyncComponent "DVL_micro" handled in the control thread.
2015-09-29T08:19:19.075Z,1443514759.075 [NAL9602] Loaded
2015-09-29T08:19:19.075Z,1443514759.075 [ComponentRegistry](DEBUG): SyncComponent "NAL9602" handled in the control thread.
2015-09-29T08:19:19.123Z,1443514759.123 [Onboard] Loaded
2015-09-29T08:19:19.123Z,1443514759.123 [ComponentRegistry](DEBUG): SyncComponent "Onboard" handled in the control thread.
2015-09-29T08:19:19.135Z,1443514759.135 [Radio_Surface] Loaded
2015-09-29T08:19:19.135Z,1443514759.135 [ComponentRegistry](DEBUG): Component "Radio_Surface" handled in its own thread.
2015-09-29T08:19:19.139Z,1443514759.139 [Radio_Surface ThreadHandler](DEBUG): Created PCaller Thread at 408114E0
2015-09-29T08:19:19.140Z,1443514759.140 [Radio_Surface ThreadHandler](INFO): Protected caller Thread ID is 812
2015-09-29T08:19:19.300Z,1443514759.300 [DAT] Loaded
2015-09-29T08:19:19.300Z,1443514759.300 [ComponentRegistry](DEBUG): SyncComponent "DAT" handled in the control thread.
2015-09-29T08:19:19.307Z,1443514759.307 [SCPI] Loaded
2015-09-29T08:19:19.307Z,1443514759.307 [ComponentRegistry](DEBUG): SyncComponent "SCPI" handled in the control thread.
2015-09-29T08:19:19.308Z,1443514759.308 [Module Loader](DEBUG): Loaded Module: Sensor (Contains the sensor components)
2015-09-29T08:19:19.309Z,1443514759.309 [Module Loader](DEBUG): Loading Module at Modules/Servo.so
2015-09-29T08:19:19.444Z,1443514759.444 [BuoyancyServo] Loaded
2015-09-29T08:19:19.445Z,1443514759.445 [ComponentRegistry](DEBUG): SyncComponent "BuoyancyServo" handled in the control thread.
2015-09-29T08:19:19.457Z,1443514759.457 [ElevatorServo] Loaded
2015-09-29T08:19:19.458Z,1443514759.458 [ComponentRegistry](DEBUG): SyncComponent "ElevatorServo" handled in the control thread.
2015-09-29T08:19:19.470Z,1443514759.470 [MassServo] Loaded
2015-09-29T08:19:19.470Z,1443514759.470 [ComponentRegistry](DEBUG): SyncComponent "MassServo" handled in the control thread.
2015-09-29T08:19:19.482Z,1443514759.482 [RudderServo] Loaded
2015-09-29T08:19:19.482Z,1443514759.482 [ComponentRegistry](DEBUG): SyncComponent "RudderServo" handled in the control thread.
2015-09-29T08:19:19.498Z,1443514759.498 [ThrusterServo] Loaded
2015-09-29T08:19:19.498Z,1443514759.498 [ComponentRegistry](DEBUG): SyncComponent "ThrusterServo" handled in the control thread.
2015-09-29T08:19:19.498Z,1443514759.498 [Module Loader](DEBUG): Loaded Module: Servo (This is the module containing motor controllers)
2015-09-29T08:19:19.499Z,1443514759.499 [Module Loader](DEBUG): Loading Module at Modules/Simulator.so
2015-09-29T08:19:19.701Z,1443514759.701 [InternalSim] Loaded
2015-09-29T08:19:19.701Z,1443514759.701 [ComponentRegistry](DEBUG): SyncComponent "InternalSim" handled in the control thread.
2015-09-29T08:19:19.702Z,1443514759.702 [Module Loader](DEBUG): Loaded Module: Simulator (This is the module containing the Simulator)
2015-09-29T08:19:19.702Z,1443514759.702 [Module Loader](DEBUG): Loading Module at Modules/Trigger.so
2015-09-29T08:19:19.745Z,1443514759.745 [Module Loader](DEBUG): Loaded Module: Trigger (Contains triggers for use in missions)
2015-09-29T08:19:19.749Z,1443514759.749 [ComponentRegistry](DEBUG): SyncComponent "MissionManager" handled in the control thread.
2015-09-29T08:19:19.750Z,1443514759.750 [ComponentRegistry](DEBUG): SyncComponent "Reporter" handled in the control thread.
2015-09-29T08:19:19.757Z,1443514759.757 [ComponentRegistry](DEBUG): Component "NavChartDb" handled in its own thread.
2015-09-29T08:19:19.760Z,1443514759.760 [NavChartDb ThreadHandler](DEBUG): Created PCaller Thread at 408BF4E0
2015-09-29T08:19:19.760Z,1443514759.760 [NavChartDb ThreadHandler](INFO): Protected caller Thread ID is 813
2015-09-29T08:19:19.765Z,1443514759.765 [Supervisor](INFO): Main Thread ID is 760
2015-09-29T08:19:19.765Z,1443514759.765 [Supervisor](DEBUG): Running supervisor.
2015-09-29T08:19:19.766Z,1443514759.766 [CommandLine ThreadHandler](INFO): Handler Thread ID is 814
2015-09-29T08:19:19.772Z,1443514759.772 [controlThread ThreadHandler](INFO): Handler Thread ID is 815
2015-09-29T08:19:19.772Z,1443514759.772 [controlThread](DEBUG): Initializing ControlThread
2015-09-29T08:19:19.773Z,1443514759.773 [VerticalControl](DEBUG): Initialize VerticalControlComponent.
2015-09-29T08:19:19.775Z,1443514759.775 [HorizontalControl](DEBUG): Initialize HorizontalControlComponent.
2015-09-29T08:19:19.776Z,1443514759.776 [SpeedControl](DEBUG): Initialize SpeedControlComponent.
2015-09-29T08:19:19.776Z,1443514759.776 [LoopControl](DEBUG): Initialize LoopControlComponent.
2015-09-29T08:19:19.777Z,1443514759.777 [SBIT](INFO): Initialize SBIT Component.
2015-09-29T08:19:19.777Z,1443514759.777 [SBIT](IMPORTANT): Tethys CM Info: SVN revision:12634
2015-09-29T08:19:19.779Z,1443514759.779 [SBIT](INFO): Kernel Reporting Different Release From Configuration.
Kernel Expected: 2.6.32-45-generic-pae
Kernel Reported: 2.6.27.8
2015-09-29T08:19:19.779Z,1443514759.779 [SBIT](INFO): Kernel Reporting Different Version From Configuration.
Kernel Expected: #102-Ubuntu SMP Wed Jan 2 22:10:16 UTC 2013
Kernel Reported: #641 PREEMPT Mon Sep 28 16:45:10 PDT 2015
2015-09-29T08:19:19.780Z,1443514759.780 [SBIT](INFO): Beginning SBIT in 20.000000 seconds.
2015-09-29T08:19:19.781Z,1443514759.781 [IBIT](INFO): Initialize IBIT Component.
2015-09-29T08:19:19.781Z,1443514759.781 [CBIT](DEBUG): Initialize CBIT Component.
2015-09-29T08:19:19.782Z,1443514759.782 [CBIT](FAULT): LAST RESTART WAS UNINTENTIONAL.
2015-09-29T08:19:19.782Z,1443514759.782 [CBIT](INFO): Last reboot was NOT due to watchdog timer.
2015-09-29T08:19:19.782Z,1443514759.782 [DepthRateCalculator](DEBUG): Initializing DepthRateCalculator.
2015-09-29T08:19:19.782Z,1443514759.782 [PitchRateCalculator](DEBUG): Initializing PitchRateCalculator.
2015-09-29T08:19:19.783Z,1443514759.783 [SpeedCalculator](DEBUG): Initializing SpeedCalculator.
2015-09-29T08:19:19.783Z,1443514759.783 [TempGradientCalculator](DEBUG): Initializing TempGradientCalculator.
2015-09-29T08:19:19.784Z,1443514759.784 [VerticalTemperatureHomogeneityIndexCalculator](DEBUG): (re)initializing
2015-09-29T08:19:19.784Z,1443514759.784 [YawRateCalculator](DEBUG): Initializing YawRateCalculator.
2015-09-29T08:19:19.785Z,1443514759.785 [DeadReckonUsingMultipleVelocitySources](DEBUG): Initializing DeadReckonUsingMultipleVelocitySources component.
2015-09-29T08:19:19.786Z,1443514759.786 [DeadReckonUsingMultipleVelocitySources](INFO): Will consider orientation measurement stale after 120s.
2015-09-29T08:19:19.786Z,1443514759.786 [DeadReckonUsingMultipleVelocitySources](INFO): Will consider velocity measurement stale after 20s.
2015-09-29T08:19:19.786Z,1443514759.786 [DeadReckonUsingSpeedCalculator](DEBUG): Initializing DeadReckonUsingSpeedCalculator component.
2015-09-29T08:19:19.787Z,1443514759.787 [DeadReckonUsingSpeedCalculator](INFO): Will consider orientation measurement stale after 120s.
2015-09-29T08:19:19.787Z,1443514759.787 [DeadReckonUsingSpeedCalculator](INFO): Will consider velocity measurement stale after 20s.
2015-09-29T08:19:19.788Z,1443514759.788 [NavChart](DEBUG): Initialize NavChart Navigation.
2015-09-29T08:19:19.788Z,1443514759.788 [UniversalFixResidualReporter](DEBUG): Initializing UniversalFixResidualReporter component.
2015-09-29T08:19:19.793Z,1443514759.793 [InternalSim](DEBUG):  InternalSim initializing...
2015-09-29T08:19:19.829Z,1443514759.829 [logger ThreadHandler](INFO): Handler Thread ID is 816
2015-09-29T08:19:19.878Z,1443514759.878 [CTD_NeilBrown ThreadHandler](INFO): Handler Thread ID is 817
2015-09-29T08:19:19.912Z,1443514759.912 [WetLabsBB2FL ThreadHandler](INFO): Handler Thread ID is 818
2015-09-29T08:19:19.927Z,1443514759.927 [MissionManager](INFO): Loading Mission: Missions/Startup.xml
2015-09-29T08:19:19.956Z,1443514759.956 [Radio_Surface ThreadHandler](INFO): Handler Thread ID is 819
2015-09-29T08:19:19.964Z,1443514759.964 [NavChartDb ThreadHandler](INFO): Handler Thread ID is 820
2015-09-29T08:19:20.013Z,1443514760.013 [NavChartDb](INFO): Looking for Electronic Nav Chart files in directory: Resources
2015-09-29T08:19:20.052Z,1443514760.052 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US1WC07M.000
2015-09-29T08:19:20.052Z,1443514760.052 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US2WC11M.000
2015-09-29T08:19:20.052Z,1443514760.052 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US3CA52M.000
2015-09-29T08:19:20.053Z,1443514760.053 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US4CA60M.000
2015-09-29T08:19:20.053Z,1443514760.053 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA50M.000
2015-09-29T08:19:20.053Z,1443514760.053 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA61M.000
2015-09-29T08:19:20.053Z,1443514760.053 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA62M.000
2015-09-29T08:19:20.054Z,1443514760.054 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA83M.000
2015-09-29T08:19:20.125Z,1443514760.125 [Startup:A.GoToSurface](DEBUG): Construct GoToSurface.
2015-09-29T08:19:20.155Z,1443514760.155 [MissionManager](DEBUG): 
<?xml version="1.0" encoding="UTF-8"?>
<Mission xmlns="Tethys"
       xmlns:Control="Tethys/Control"
       xmlns:Guidance="Tethys/Guidance" 
       xmlns:Units="Tethys/Units"
       xmlns:Universal="Tethys/Universal"
       xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
       xsi:schemaLocation="Tethys http://okeanids.mbari.org/tethys/Xml/Tethys.xsd
                           Tethys/Control http://okeanids.mbari.org/tethys/Xml/Control.xsd
                           Tethys/Guidance http://okeanids.mbari.org/tethys/Xml/Guidance.xsd
                           Tethys/Units http://okeanids.mbari.org/tethys/Xml/Units.xsd
                           Tethys/Universal http://okeanids.mbari.org/tethys/Xml/Universal.xsd"
       Id="Startup">

    <Guidance:GoToSurface>
        <Progression/>
    </Guidance:GoToSurface>

    <Aggregate Id="StartupSatComms">

        <Sequence/>

        <ReadDatum>
            <Timeout Duration="P1M" />
            <Universal:latitude_fix/>
        </ReadDatum>

        <ReadDatum>
            <Timeout Duration="P1M" />
            <Universal:platform_communications/>
        </ReadDatum>

    </Aggregate>

</Mission>


2015-09-29T08:19:20.187Z,1443514760.187 [MissionManager](INFO): Loading Mission: Missions/Default.xml
2015-09-29T08:19:20.248Z,1443514760.248 [MissionManager](INFO): DefineArg Default.ElapsedSinceDefaultStarted = 0.000000 min
2015-09-29T08:19:20.249Z,1443514760.249 [Default:A.GoToSurface](DEBUG): Construct GoToSurface.
2015-09-29T08:19:20.283Z,1443514760.283 [Default:CheckIn:Read_Iridium:A_Timeout:A.Execute](DEBUG): Construct Execute.
2015-09-29T08:19:20.286Z,1443514760.286 [Default:CheckIn:C.Wait](DEBUG): Construct Wait.
2015-09-29T08:19:20.308Z,1443514760.308 [Default:D.Execute](DEBUG): Construct Execute.
2015-09-29T08:19:20.311Z,1443514760.311 [MissionManager](DEBUG): 
<?xml version="1.0" encoding="UTF-8"?>
<Mission xmlns="Tethys"
xmlns:Guidance="Tethys/Guidance"
xmlns:Units="Tethys/Units"
xmlns:Universal="Tethys/Universal"
xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
xsi:schemaLocation="Tethys http://okeanids.mbari.org/tethys/Xml/Tethys.xsd
Tethys/Guidance http://okeanids.mbari.org/tethys/Xml/Guidance.xsd
Tethys/Units http://okeanids.mbari.org/tethys/Xml/Units.xsd
Tethys/Universal http://okeanids.mbari.org/tethys/Xml/Universal.xsd"
Id="Default">

    <DefineArg Name="ElapsedSinceDefaultStarted"><Units:minute/><Value>0</Value></DefineArg>

    <Guidance:GoToSurface>
        <Progression/>
    </Guidance:GoToSurface>

    <Aggregate Id="CheckIn">

        <Sequence Repeat="288"/>

        <ReadDatum Id="Read_GPS">
            <Sequence/>
            <Timeout Duration="P5M"/>
            <Universal:time_fix/>
        </ReadDatum>

        <ReadDatum Id="Read_Iridium">
            <Sequence/>
            <Timeout Duration="P2H">
                <Guidance:Execute>
                    <Sequence/>
                    <Setting><Guidance:Execute.command/><String>Burn 300</String></Setting>
                </Guidance:Execute>
                <Syslog Severity="Critical">Dropped weight due to communications timeout.</Syslog>
            </Timeout>
            <Universal:platform_communications/>
        </ReadDatum>

        <Guidance:Wait>
            <Sequence/>
            <Setting><Guidance:Wait.duration/><Units:minute/><Value>5</Value></Setting>
        </Guidance:Wait>

        <Assign><Sequence/><Arg Name="ElapsedSinceDefaultStarted"/><Elapsed><Universal:mission_started/></Elapsed></Assign>

        <Syslog Severity="Important">Default mission has been running for <Arg Name="ElapsedSinceDefaultStarted"/><Units:minute/></Syslog>

    </Aggregate>

    <Syslog Severity="Important">Restarting logs and Default mission.</Syslog>

    <Guidance:Execute>
        <Sequence/>
        <Setting><Guidance:Execute.command/><String>restart logs</String></Setting>
    </Guidance:Execute>

</Mission>


2015-09-29T08:19:20.334Z,1443514760.334 [controlThread](DEBUG): Component order: CycleStarter,InternalSim,ISUS,PAR_Licor,AHRS_sp3003D,DataOverHttps,Depth_Keller,DropWeight,DVL_micro,NAL9602,Onboard,DAT,SCPI,PAR_Licor,Depth_Keller,DepthRateCalculator,PitchRateCalculator,SpeedCalculator,TempGradientCalculator,VerticalTemperatureHomogeneityIndexCalculator,YawRateCalculator,StratificationFrontDetector,DeadReckonUsingMultipleVelocitySources,DeadReckonUsingSpeedCalculator,NavChart,UniversalFixResidualReporter,MissionManager,VerticalControl,HorizontalControl,SpeedControl,LoopControl,BuoyancyServo,ElevatorServo,MassServo,RudderServo,ThrusterServo,SBIT,IBIT,CBIT,Reporter,LogSplitter,
2015-09-29T08:19:20.614Z,1443514760.614 [DVL_micro](INFO): Initializing
2015-09-29T08:19:20.768Z,1443514760.768 [DeadReckonUsingMultipleVelocitySources](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T08:19:20.792Z,1443514760.792 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T08:19:20.901Z,1443514760.901 [BuoyancyServo](DEBUG): Initializing BuoyancyServo.
2015-09-29T08:19:20.920Z,1443514760.920 [ElevatorServo](DEBUG): Initializing ElevatorServo.
2015-09-29T08:19:20.925Z,1443514760.925 [MassServo](DEBUG): Initializing MassServo.
2015-09-29T08:19:20.944Z,1443514760.944 [RudderServo](DEBUG): Initializing RudderServo.
2015-09-29T08:19:20.954Z,1443514760.954 [ThrusterServo](DEBUG): Initializing ThrusterServo.
2015-09-29T08:19:21.232Z,1443514761.232 [DeadReckonUsingMultipleVelocitySources](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T08:19:21.233Z,1443514761.233 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T08:19:30.291Z,1443514770.291 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T08:19:30.626Z,1443514770.626 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T08:19:30.766Z,1443514770.766 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T08:19:31.167Z,1443514771.167 [DataOverHttps](INFO): setting available, lastComms_.elapsed()=0.003000
2015-09-29T08:19:31.170Z,1443514771.170 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T08:19:31.565Z,1443514771.565 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T08:19:31.965Z,1443514771.965 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T08:19:32.364Z,1443514772.364 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T08:19:32.764Z,1443514772.764 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T08:19:33.164Z,1443514773.164 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T08:19:33.564Z,1443514773.564 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T08:19:33.964Z,1443514773.964 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T08:19:34.364Z,1443514774.364 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T08:19:34.764Z,1443514774.764 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T08:19:35.164Z,1443514775.164 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T08:19:35.563Z,1443514775.563 [NAL9602](INFO): No messages in MT queue
2015-09-29T08:19:35.564Z,1443514775.564 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T08:19:35.964Z,1443514775.964 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T08:19:36.364Z,1443514776.364 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T08:19:36.764Z,1443514776.764 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T08:19:37.164Z,1443514777.164 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T08:19:37.564Z,1443514777.564 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T08:19:37.964Z,1443514777.964 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T08:19:38.364Z,1443514778.364 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T08:19:38.764Z,1443514778.764 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T08:19:39.164Z,1443514779.164 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T08:19:39.564Z,1443514779.564 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T08:19:39.969Z,1443514779.969 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T08:19:40.370Z,1443514780.370 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T08:19:40.384Z,1443514780.384 [SBIT](IMPORTANT): Beginning Startup BIT
2015-09-29T08:19:40.769Z,1443514780.769 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T08:19:41.174Z,1443514781.174 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T08:19:41.574Z,1443514781.574 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T08:19:41.969Z,1443514781.969 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T08:19:42.364Z,1443514782.364 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T08:19:42.764Z,1443514782.764 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T08:19:43.165Z,1443514783.165 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T08:19:43.564Z,1443514783.564 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T08:19:43.964Z,1443514783.964 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T08:19:44.364Z,1443514784.364 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T08:19:44.764Z,1443514784.764 [D