2015-09-29T08:03:24.141Z,1443513804.141 [Supervisor](DEBUG): Initializing supervisor.
2015-09-29T08:03:24.145Z,1443513804.145 [SyncHandler](DEBUG): Created PCaller Thread at 4034C4E0
2015-09-29T08:03:24.145Z,1443513804.145 [SyncHandler](INFO): Protected caller Thread ID is 761
2015-09-29T08:03:24.146Z,1443513804.146 [ComponentRegistry](DEBUG): Component "controlThread" handled in its own thread.
2015-09-29T08:03:24.147Z,1443513804.147 [controlThread ThreadHandler](DEBUG): Created PCaller Thread at 4037C4E0
2015-09-29T08:03:24.147Z,1443513804.147 [controlThread ThreadHandler](INFO): Protected caller Thread ID is 762
2015-09-29T08:03:24.150Z,1443513804.150 [ComponentRegistry](DEBUG): SyncComponent "CycleStarter" handled in the control thread.
2015-09-29T08:03:24.163Z,1443513804.163 [ComponentRegistry](DEBUG): Component "CommandLine" handled in its own thread.
2015-09-29T08:03:24.167Z,1443513804.167 [CommandLine ThreadHandler](DEBUG): Created PCaller Thread at 403AC4E0
2015-09-29T08:03:24.167Z,1443513804.167 [CommandLine ThreadHandler](INFO): Protected caller Thread ID is 763
2015-09-29T08:03:24.168Z,1443513804.168 [ComponentRegistry](DEBUG): Component "logger" handled in its own thread.
2015-09-29T08:03:24.171Z,1443513804.171 [logger ThreadHandler](DEBUG): Created PCaller Thread at 403DC4E0
2015-09-29T08:03:24.171Z,1443513804.171 [logger ThreadHandler](INFO): Protected caller Thread ID is 764
2015-09-29T08:03:24.173Z,1443513804.173 [ComponentRegistry](DEBUG): SyncComponent "LogSplitter" handled in the control thread.
2015-09-29T08:03:24.174Z,1443513804.174 [Supervisor](INFO): Looking for Config files in directory: Config/
2015-09-29T08:03:24.178Z,1443513804.178 [Supervisor](INFO): Opening Config file at: Config/Control.cfg
2015-09-29T08:03:24.568Z,1443513804.568 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Control
2015-09-29T08:03:24.570Z,1443513804.570 [Supervisor](INFO): Opening Config file at: Config/BIT.cfg
2015-09-29T08:03:24.762Z,1443513804.762 [ComponentRegistry](DEBUG): Loaded Config Component "Config/BIT
2015-09-29T08:03:24.764Z,1443513804.764 [Supervisor](INFO): Opening Config file at: Config/Derivation.cfg
2015-09-29T08:03:24.908Z,1443513804.908 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Derivation
2015-09-29T08:03:24.908Z,1443513804.908 [Supervisor](INFO): Opening Config file at: Config/Estimation.cfg
2015-09-29T08:03:25.056Z,1443513805.056 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Estimation
2015-09-29T08:03:25.056Z,1443513805.056 [Supervisor](INFO): Opening Config file at: Config/Guidance.cfg
2015-09-29T08:03:25.155Z,1443513805.155 [Supervisor](INFO): Opening Config file at: Config/Navigation.cfg
2015-09-29T08:03:25.374Z,1443513805.374 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Navigation
2015-09-29T08:03:25.375Z,1443513805.375 [Supervisor](INFO): Opening Config file at: Config/Sample.cfg
2015-09-29T08:03:25.470Z,1443513805.470 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Sample
2015-09-29T08:03:25.471Z,1443513805.471 [Supervisor](INFO): Opening Config file at: Config/Science.cfg
2015-09-29T08:03:25.784Z,1443513805.784 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Science
2015-09-29T08:03:25.785Z,1443513805.785 [Supervisor](INFO): Opening Config file at: Config/Sensor.cfg
2015-09-29T08:03:26.184Z,1443513806.184 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Sensor
2015-09-29T08:03:26.185Z,1443513806.185 [Supervisor](INFO): Opening Config file at: Config/Servo.cfg
2015-09-29T08:03:26.536Z,1443513806.536 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Servo
2015-09-29T08:03:26.538Z,1443513806.538 [Supervisor](INFO): Opening Config file at: Config/Simulator.cfg
2015-09-29T08:03:27.133Z,1443513807.133 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Simulator
2015-09-29T08:03:27.133Z,1443513807.133 [Supervisor](INFO): Opening Config file at: Config/logger.cfg
2015-09-29T08:03:27.364Z,1443513807.364 [ComponentRegistry](DEBUG): Loaded Config Component "Config/logger
2015-09-29T08:03:27.365Z,1443513807.365 [Supervisor](INFO): Opening Config file at: Config/secure.cfg
2015-09-29T08:03:27.484Z,1443513807.484 [ComponentRegistry](DEBUG): Loaded Config Component "Config/secure
2015-09-29T08:03:27.484Z,1443513807.484 [Supervisor](INFO): Opening Config file at: Config/vehicle.cfg
2015-09-29T08:03:27.000Z,1443513808.000 [ComponentRegistry](DEBUG): Loaded Config Component "Config/vehicle
2015-09-29T08:03:28.000Z,1443513808.000 [Supervisor](INFO): Opening Config file at: Config/workSite.cfg
2015-09-29T08:03:28.184Z,1443513808.184 [ComponentRegistry](DEBUG): Loaded Config Component "Config/workSite
2015-09-29T08:03:28.186Z,1443513808.186 [Supervisor](INFO): Looking for Config files in directory: Config/(none)/
2015-09-29T08:03:28.186Z,1443513808.186 [Supervisor](FAULT): Ignoring configuration overrides from Data/persisted.cfg
2015-09-29T08:03:28.191Z,1443513808.191 [Module Loader](DEBUG): Loading Module at Modules/Control.so
2015-09-29T08:03:28.263Z,1443513808.263 [VerticalControl](DEBUG): Construct VerticalControl.
2015-09-29T08:03:28.399Z,1443513808.399 [VerticalControl] Loaded
2015-09-29T08:03:28.399Z,1443513808.399 [ComponentRegistry](DEBUG): SyncComponent "VerticalControl" handled in the control thread.
2015-09-29T08:03:28.400Z,1443513808.400 [HorizontalControl](DEBUG): Construct HorizontalControl.
2015-09-29T08:03:28.482Z,1443513808.482 [HorizontalControl] Loaded
2015-09-29T08:03:28.482Z,1443513808.482 [ComponentRegistry](DEBUG): SyncComponent "HorizontalControl" handled in the control thread.
2015-09-29T08:03:28.483Z,1443513808.483 [SpeedControl](DEBUG): Construct SpeedControl.
2015-09-29T08:03:28.489Z,1443513808.489 [SpeedControl] Loaded
2015-09-29T08:03:28.489Z,1443513808.489 [ComponentRegistry](DEBUG): SyncComponent "SpeedControl" handled in the control thread.
2015-09-29T08:03:28.490Z,1443513808.490 [LoopControl](DEBUG): Construct LoopControl.
2015-09-29T08:03:28.490Z,1443513808.490 [LoopControl] Loaded
2015-09-29T08:03:28.491Z,1443513808.491 [ComponentRegistry](DEBUG): SyncComponent "LoopControl" handled in the control thread.
2015-09-29T08:03:28.491Z,1443513808.491 [Module Loader](DEBUG): Loaded Module: Control (Contains the Control components, such as Depth, Heading, and Speed Control)
2015-09-29T08:03:28.492Z,1443513808.492 [Module Loader](DEBUG): Loading Module at Modules/BIT.so
2015-09-29T08:03:28.651Z,1443513808.651 [SBIT](DEBUG): Construct Startup Built In Test.
2015-09-29T08:03:28.663Z,1443513808.663 [SBIT] Loaded
2015-09-29T08:03:28.663Z,1443513808.663 [ComponentRegistry](DEBUG): SyncComponent "SBIT" handled in the control thread.
2015-09-29T08:03:28.664Z,1443513808.664 [IBIT](DEBUG): Construct Initiated Built In Test.
2015-09-29T08:03:28.698Z,1443513808.698 [IBIT] Loaded
2015-09-29T08:03:28.698Z,1443513808.698 [ComponentRegistry](DEBUG): SyncComponent "IBIT" handled in the control thread.
2015-09-29T08:03:28.701Z,1443513808.701 [CBIT](DEBUG): Construct Continuous Built In Test.
2015-09-29T08:03:28.857Z,1443513808.857 [CBIT] Loaded
2015-09-29T08:03:28.857Z,1443513808.857 [ComponentRegistry](DEBUG): SyncComponent "CBIT" handled in the control thread.
2015-09-29T08:03:28.858Z,1443513808.858 [Module Loader](DEBUG): Loaded Module: BIT (Contains the BuiltInTest components, such as C Built In Test)
2015-09-29T08:03:28.859Z,1443513808.859 [Module Loader](DEBUG): Loading Module at Modules/Derivation.so
2015-09-29T08:03:28.900Z,1443513808.900 [DepthRateCalculator] Loaded
2015-09-29T08:03:28.900Z,1443513808.900 [ComponentRegistry](DEBUG): SyncComponent "DepthRateCalculator" handled in the control thread.
2015-09-29T08:03:28.906Z,1443513808.906 [PitchRateCalculator] Loaded
2015-09-29T08:03:28.906Z,1443513808.906 [ComponentRegistry](DEBUG): SyncComponent "PitchRateCalculator" handled in the control thread.
2015-09-29T08:03:28.918Z,1443513808.918 [SpeedCalculator] Loaded
2015-09-29T08:03:28.918Z,1443513808.918 [ComponentRegistry](DEBUG): SyncComponent "SpeedCalculator" handled in the control thread.
2015-09-29T08:03:28.940Z,1443513808.940 [TempGradientCalculator] Loaded
2015-09-29T08:03:28.940Z,1443513808.940 [ComponentRegistry](DEBUG): SyncComponent "TempGradientCalculator" handled in the control thread.
2015-09-29T08:03:28.957Z,1443513808.957 [VerticalTemperatureHomogeneityIndexCalculator] Loaded
2015-09-29T08:03:28.958Z,1443513808.958 [ComponentRegistry](DEBUG): SyncComponent "VerticalTemperatureHomogeneityIndexCalculator" handled in the control thread.
2015-09-29T08:03:28.963Z,1443513808.963 [YawRateCalculator] Loaded
2015-09-29T08:03:28.963Z,1443513808.963 [ComponentRegistry](DEBUG): SyncComponent "YawRateCalculator" handled in the control thread.
2015-09-29T08:03:28.964Z,1443513808.964 [Module Loader](DEBUG): Loaded Module: Derivation (Contains the base derivation components)
2015-09-29T08:03:28.964Z,1443513808.964 [Module Loader](DEBUG): Loading Module at Modules/Estimation.so
2015-09-29T08:03:29.087Z,1443513809.087 [StratificationFrontDetector](INFO): threshold set to: 0.399988 degC
2015-09-29T08:03:29.087Z,1443513809.087 [StratificationFrontDetector](DEBUG): (re)initializing
2015-09-29T08:03:29.087Z,1443513809.087 [StratificationFrontDetector] Loaded
2015-09-29T08:03:29.087Z,1443513809.087 [ComponentRegistry](DEBUG): SyncComponent "StratificationFrontDetector" handled in the control thread.
2015-09-29T08:03:29.088Z,1443513809.088 [Module Loader](DEBUG): Loaded Module: Estimation (Contains the base estimation components)
2015-09-29T08:03:29.089Z,1443513809.089 [Module Loader](DEBUG): Loading Module at Modules/Guidance.so
2015-09-29T08:03:29.376Z,1443513809.376 [Module Loader](DEBUG): Loaded Module: Guidance (Contains behaviors and commands)
2015-09-29T08:03:29.376Z,1443513809.376 [Module Loader](DEBUG): Loading Module at Modules/Navigation.so
2015-09-29T08:03:29.510Z,1443513809.510 [DeadReckonUsingMultipleVelocitySources] Loaded
2015-09-29T08:03:29.510Z,1443513809.510 [ComponentRegistry](DEBUG): SyncComponent "DeadReckonUsingMultipleVelocitySources" handled in the control thread.
2015-09-29T08:03:29.575Z,1443513809.575 [DeadReckonUsingSpeedCalculator] Loaded
2015-09-29T08:03:29.575Z,1443513809.575 [ComponentRegistry](DEBUG): SyncComponent "DeadReckonUsingSpeedCalculator" handled in the control thread.
2015-09-29T08:03:29.593Z,1443513809.593 [NavChart] Loaded
2015-09-29T08:03:29.594Z,1443513809.594 [ComponentRegistry](DEBUG): SyncComponent "NavChart" handled in the control thread.
2015-09-29T08:03:29.599Z,1443513809.599 [UniversalFixResidualReporter] Loaded
2015-09-29T08:03:29.599Z,1443513809.599 [ComponentRegistry](DEBUG): SyncComponent "UniversalFixResidualReporter" handled in the control thread.
2015-09-29T08:03:29.600Z,1443513809.600 [Module Loader](DEBUG): Loaded Module: Navigation (Contains the base navigation components)
2015-09-29T08:03:29.600Z,1443513809.600 [Module Loader](DEBUG): Loading Module at Modules/Sample.so
2015-09-29T08:03:29.609Z,1443513809.609 [Module Loader](DEBUG): Loaded Module: Sample (This is a Sample Module of Sample Components)
2015-09-29T08:03:29.610Z,1443513809.610 [Module Loader](DEBUG): Loading Module at Modules/Science.so
2015-09-29T08:03:29.909Z,1443513809.909 [CTD_NeilBrown] Loaded
2015-09-29T08:03:29.909Z,1443513809.909 [ComponentRegistry](DEBUG): Component "CTD_NeilBrown" handled in its own thread.
2015-09-29T08:03:29.911Z,1443513809.911 [CTD_NeilBrown ThreadHandler](DEBUG): Created PCaller Thread at 4059D4E0
2015-09-29T08:03:29.911Z,1443513809.911 [CTD_NeilBrown ThreadHandler](INFO): Protected caller Thread ID is 810
2015-09-29T08:03:29.924Z,1443513809.924 [ISUS] Loaded
2015-09-29T08:03:29.925Z,1443513809.925 [ComponentRegistry](DEBUG): SyncComponent "ISUS" handled in the control thread.
2015-09-29T08:03:29.940Z,1443513809.940 [PAR_Licor] Loaded
2015-09-29T08:03:29.940Z,1443513809.940 [ComponentRegistry](DEBUG): SyncComponent "PAR_Licor" handled in the control thread.
2015-09-29T08:03:30.000Z,1443513810.000 [WetLabsBB2FL] Loaded
2015-09-29T08:03:30.001Z,1443513810.001 [ComponentRegistry](DEBUG): Component "WetLabsBB2FL" handled in its own thread.
2015-09-29T08:03:30.003Z,1443513810.003 [WetLabsBB2FL ThreadHandler](DEBUG): Created PCaller Thread at 405CD4E0
2015-09-29T08:03:30.003Z,1443513810.003 [WetLabsBB2FL ThreadHandler](INFO): Protected caller Thread ID is 811
2015-09-29T08:03:30.004Z,1443513810.004 [Module Loader](DEBUG): Loaded Module: Science (Contains the science components)
2015-09-29T08:03:30.005Z,1443513810.005 [Module Loader](DEBUG): Loading Module at Modules/Sensor.so
2015-09-29T08:03:30.744Z,1443513810.744 [AHRS_sp3003D] Loaded
2015-09-29T08:03:30.745Z,1443513810.745 [ComponentRegistry](DEBUG): SyncComponent "AHRS_sp3003D" handled in the control thread.
2015-09-29T08:03:30.941Z,1443513810.941 [DataOverHttps] Loaded
2015-09-29T08:03:30.941Z,1443513810.941 [ComponentRegistry](DEBUG): SyncComponent "DataOverHttps" handled in the control thread.
2015-09-29T08:03:30.959Z,1443513810.959 [Depth_Keller] Loaded
2015-09-29T08:03:30.959Z,1443513810.959 [ComponentRegistry](DEBUG): SyncComponent "Depth_Keller" handled in the control thread.
2015-09-29T08:03:30.964Z,1443513810.964 [DropWeight] Loaded
2015-09-29T08:03:30.965Z,1443513810.965 [ComponentRegistry](DEBUG): SyncComponent "DropWeight" handled in the control thread.
2015-09-29T08:03:31.117Z,1443513811.117 [DVL_micro] Loaded
2015-09-29T08:03:31.117Z,1443513811.117 [ComponentRegistry](DEBUG): SyncComponent "DVL_micro" handled in the control thread.
2015-09-29T08:03:31.226Z,1443513811.226 [NAL9602] Loaded
2015-09-29T08:03:31.226Z,1443513811.226 [ComponentRegistry](DEBUG): SyncComponent "NAL9602" handled in the control thread.
2015-09-29T08:03:31.274Z,1443513811.274 [Onboard] Loaded
2015-09-29T08:03:31.274Z,1443513811.274 [ComponentRegistry](DEBUG): SyncComponent "Onboard" handled in the control thread.
2015-09-29T08:03:31.286Z,1443513811.286 [Radio_Surface] Loaded
2015-09-29T08:03:31.286Z,1443513811.286 [ComponentRegistry](DEBUG): Component "Radio_Surface" handled in its own thread.
2015-09-29T08:03:31.295Z,1443513811.295 [Radio_Surface ThreadHandler](DEBUG): Created PCaller Thread at 408114E0
2015-09-29T08:03:31.295Z,1443513811.295 [Radio_Surface ThreadHandler](INFO): Protected caller Thread ID is 812
2015-09-29T08:03:31.458Z,1443513811.458 [DAT] Loaded
2015-09-29T08:03:31.458Z,1443513811.458 [ComponentRegistry](DEBUG): SyncComponent "DAT" handled in the control thread.
2015-09-29T08:03:31.469Z,1443513811.469 [SCPI] Loaded
2015-09-29T08:03:31.469Z,1443513811.469 [ComponentRegistry](DEBUG): SyncComponent "SCPI" handled in the control thread.
2015-09-29T08:03:31.470Z,1443513811.470 [Module Loader](DEBUG): Loaded Module: Sensor (Contains the sensor components)
2015-09-29T08:03:31.471Z,1443513811.471 [Module Loader](DEBUG): Loading Module at Modules/Servo.so
2015-09-29T08:03:31.602Z,1443513811.602 [BuoyancyServo] Loaded
2015-09-29T08:03:31.603Z,1443513811.603 [ComponentRegistry](DEBUG): SyncComponent "BuoyancyServo" handled in the control thread.
2015-09-29T08:03:31.616Z,1443513811.616 [ElevatorServo] Loaded
2015-09-29T08:03:31.616Z,1443513811.616 [ComponentRegistry](DEBUG): SyncComponent "ElevatorServo" handled in the control thread.
2015-09-29T08:03:31.632Z,1443513811.632 [MassServo] Loaded
2015-09-29T08:03:31.632Z,1443513811.632 [ComponentRegistry](DEBUG): SyncComponent "MassServo" handled in the control thread.
2015-09-29T08:03:31.644Z,1443513811.644 [RudderServo] Loaded
2015-09-29T08:03:31.645Z,1443513811.645 [ComponentRegistry](DEBUG): SyncComponent "RudderServo" handled in the control thread.
2015-09-29T08:03:31.656Z,1443513811.656 [ThrusterServo] Loaded
2015-09-29T08:03:31.657Z,1443513811.657 [ComponentRegistry](DEBUG): SyncComponent "ThrusterServo" handled in the control thread.
2015-09-29T08:03:31.657Z,1443513811.657 [Module Loader](DEBUG): Loaded Module: Servo (This is the module containing motor controllers)
2015-09-29T08:03:31.658Z,1443513811.658 [Module Loader](DEBUG): Loading Module at Modules/Simulator.so
2015-09-29T08:03:31.856Z,1443513811.856 [InternalSim] Loaded
2015-09-29T08:03:31.856Z,1443513811.856 [ComponentRegistry](DEBUG): SyncComponent "InternalSim" handled in the control thread.
2015-09-29T08:03:31.856Z,1443513811.856 [Module Loader](DEBUG): Loaded Module: Simulator (This is the module containing the Simulator)
2015-09-29T08:03:31.857Z,1443513811.857 [Module Loader](DEBUG): Loading Module at Modules/Trigger.so
2015-09-29T08:03:31.900Z,1443513811.900 [Module Loader](DEBUG): Loaded Module: Trigger (Contains triggers for use in missions)
2015-09-29T08:03:31.904Z,1443513811.904 [ComponentRegistry](DEBUG): SyncComponent "MissionManager" handled in the control thread.
2015-09-29T08:03:31.905Z,1443513811.905 [ComponentRegistry](DEBUG): SyncComponent "Reporter" handled in the control thread.
2015-09-29T08:03:31.912Z,1443513811.912 [ComponentRegistry](DEBUG): Component "NavChartDb" handled in its own thread.
2015-09-29T08:03:31.915Z,1443513811.915 [NavChartDb ThreadHandler](DEBUG): Created PCaller Thread at 408BF4E0
2015-09-29T08:03:31.915Z,1443513811.915 [NavChartDb ThreadHandler](INFO): Protected caller Thread ID is 813
2015-09-29T08:03:31.920Z,1443513811.920 [Supervisor](INFO): Main Thread ID is 760
2015-09-29T08:03:31.920Z,1443513811.920 [Supervisor](DEBUG): Running supervisor.
2015-09-29T08:03:31.921Z,1443513811.921 [CommandLine ThreadHandler](INFO): Handler Thread ID is 814
2015-09-29T08:03:31.927Z,1443513811.927 [controlThread ThreadHandler](INFO): Handler Thread ID is 815
2015-09-29T08:03:31.928Z,1443513811.928 [controlThread](DEBUG): Initializing ControlThread
2015-09-29T08:03:31.929Z,1443513811.929 [VerticalControl](DEBUG): Initialize VerticalControlComponent.
2015-09-29T08:03:31.931Z,1443513811.931 [HorizontalControl](DEBUG): Initialize HorizontalControlComponent.
2015-09-29T08:03:31.931Z,1443513811.931 [SpeedControl](DEBUG): Initialize SpeedControlComponent.
2015-09-29T08:03:31.932Z,1443513811.932 [LoopControl](DEBUG): Initialize LoopControlComponent.
2015-09-29T08:03:31.932Z,1443513811.932 [SBIT](INFO): Initialize SBIT Component.
2015-09-29T08:03:31.933Z,1443513811.933 [SBIT](IMPORTANT): Tethys CM Info: SVN revision:12634
2015-09-29T08:03:31.934Z,1443513811.934 [SBIT](INFO): Kernel Reporting Different Release From Configuration.
Kernel Expected: 2.6.32-45-generic-pae
Kernel Reported: 2.6.27.8
2015-09-29T08:03:31.935Z,1443513811.935 [SBIT](INFO): Kernel Reporting Different Version From Configuration.
Kernel Expected: #102-Ubuntu SMP Wed Jan 2 22:10:16 UTC 2013
Kernel Reported: #641 PREEMPT Mon Sep 28 16:45:10 PDT 2015
2015-09-29T08:03:31.936Z,1443513811.936 [SBIT](INFO): Beginning SBIT in 20.000000 seconds.
2015-09-29T08:03:31.936Z,1443513811.936 [IBIT](INFO): Initialize IBIT Component.
2015-09-29T08:03:31.937Z,1443513811.937 [CBIT](DEBUG): Initialize CBIT Component.
2015-09-29T08:03:31.937Z,1443513811.937 [CBIT](FAULT): LAST RESTART WAS UNINTENTIONAL.
2015-09-29T08:03:31.937Z,1443513811.937 [CBIT](INFO): Last reboot was NOT due to watchdog timer.
2015-09-29T08:03:31.938Z,1443513811.938 [DepthRateCalculator](DEBUG): Initializing DepthRateCalculator.
2015-09-29T08:03:31.938Z,1443513811.938 [PitchRateCalculator](DEBUG): Initializing PitchRateCalculator.
2015-09-29T08:03:31.938Z,1443513811.938 [SpeedCalculator](DEBUG): Initializing SpeedCalculator.
2015-09-29T08:03:31.938Z,1443513811.938 [TempGradientCalculator](DEBUG): Initializing TempGradientCalculator.
2015-09-29T08:03:31.939Z,1443513811.939 [VerticalTemperatureHomogeneityIndexCalculator](DEBUG): (re)initializing
2015-09-29T08:03:31.940Z,1443513811.940 [YawRateCalculator](DEBUG): Initializing YawRateCalculator.
2015-09-29T08:03:31.940Z,1443513811.940 [DeadReckonUsingMultipleVelocitySources](DEBUG): Initializing DeadReckonUsingMultipleVelocitySources component.
2015-09-29T08:03:31.941Z,1443513811.941 [DeadReckonUsingMultipleVelocitySources](INFO): Will consider orientation measurement stale after 120s.
2015-09-29T08:03:31.941Z,1443513811.941 [DeadReckonUsingMultipleVelocitySources](INFO): Will consider velocity measurement stale after 20s.
2015-09-29T08:03:31.942Z,1443513811.942 [DeadReckonUsingSpeedCalculator](DEBUG): Initializing DeadReckonUsingSpeedCalculator component.
2015-09-29T08:03:31.942Z,1443513811.942 [DeadReckonUsingSpeedCalculator](INFO): Will consider orientation measurement stale after 120s.
2015-09-29T08:03:31.942Z,1443513811.942 [DeadReckonUsingSpeedCalculator](INFO): Will consider velocity measurement stale after 20s.
2015-09-29T08:03:31.943Z,1443513811.943 [NavChart](DEBUG): Initialize NavChart Navigation.
2015-09-29T08:03:31.943Z,1443513811.943 [UniversalFixResidualReporter](DEBUG): Initializing UniversalFixResidualReporter component.
2015-09-29T08:03:31.949Z,1443513811.949 [InternalSim](DEBUG):  InternalSim initializing...
2015-09-29T08:03:31.979Z,1443513811.979 [logger ThreadHandler](INFO): Handler Thread ID is 816
2015-09-29T08:03:32.083Z,1443513812.083 [CTD_NeilBrown ThreadHandler](INFO): Handler Thread ID is 817
2015-09-29T08:03:32.085Z,1443513812.085 [WetLabsBB2FL ThreadHandler](INFO): Handler Thread ID is 818
2015-09-29T08:03:32.096Z,1443513812.096 [Radio_Surface ThreadHandler](INFO): Handler Thread ID is 819
2015-09-29T08:03:32.158Z,1443513812.158 [NavChartDb ThreadHandler](INFO): Handler Thread ID is 820
2015-09-29T08:03:32.168Z,1443513812.168 [MissionManager](INFO): Loading Mission: Missions/Startup.xml
2015-09-29T08:03:32.198Z,1443513812.198 [NavChartDb](INFO): Looking for Electronic Nav Chart files in directory: Resources
2015-09-29T08:03:32.203Z,1443513812.203 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US1WC07M.000
2015-09-29T08:03:32.204Z,1443513812.204 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US2WC11M.000
2015-09-29T08:03:32.204Z,1443513812.204 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US3CA52M.000
2015-09-29T08:03:32.204Z,1443513812.204 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US4CA60M.000
2015-09-29T08:03:32.204Z,1443513812.204 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA50M.000
2015-09-29T08:03:32.205Z,1443513812.205 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA61M.000
2015-09-29T08:03:32.205Z,1443513812.205 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA62M.000
2015-09-29T08:03:32.205Z,1443513812.205 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA83M.000
2015-09-29T08:03:32.211Z,1443513812.211 [Startup:A.GoToSurface](DEBUG): Construct GoToSurface.
2015-09-29T08:03:32.293Z,1443513812.293 [MissionManager](DEBUG): 
<?xml version="1.0" encoding="UTF-8"?>
<Mission xmlns="Tethys"
       xmlns:Control="Tethys/Control"
       xmlns:Guidance="Tethys/Guidance" 
       xmlns:Units="Tethys/Units"
       xmlns:Universal="Tethys/Universal"
       xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
       xsi:schemaLocation="Tethys http://okeanids.mbari.org/tethys/Xml/Tethys.xsd
                           Tethys/Control http://okeanids.mbari.org/tethys/Xml/Control.xsd
                           Tethys/Guidance http://okeanids.mbari.org/tethys/Xml/Guidance.xsd
                           Tethys/Units http://okeanids.mbari.org/tethys/Xml/Units.xsd
                           Tethys/Universal http://okeanids.mbari.org/tethys/Xml/Universal.xsd"
       Id="Startup">

    <Guidance:GoToSurface>
        <Progression/>
    </Guidance:GoToSurface>

    <Aggregate Id="StartupSatComms">

        <Sequence/>

        <ReadDatum>
            <Timeout Duration="P1M" />
            <Universal:latitude_fix/>
        </ReadDatum>

        <ReadDatum>
            <Timeout Duration="P1M" />
            <Universal:platform_communications/>
        </ReadDatum>

    </Aggregate>

</Mission>


2015-09-29T08:03:32.294Z,1443513812.294 [MissionManager](INFO): Loading Mission: Missions/Default.xml
2015-09-29T08:03:32.353Z,1443513812.353 [MissionManager](INFO): DefineArg Default.ElapsedSinceDefaultStarted = 0.000000 min
2015-09-29T08:03:32.354Z,1443513812.354 [Default:A.GoToSurface](DEBUG): Construct GoToSurface.
2015-09-29T08:03:32.405Z,1443513812.405 [Default:CheckIn:Read_Iridium:A_Timeout:A.Execute](DEBUG): Construct Execute.
2015-09-29T08:03:32.408Z,1443513812.408 [Default:CheckIn:C.Wait](DEBUG): Construct Wait.
2015-09-29T08:03:32.426Z,1443513812.426 [Default:D.Execute](DEBUG): Construct Execute.
2015-09-29T08:03:32.430Z,1443513812.430 [MissionManager](DEBUG): 
<?xml version="1.0" encoding="UTF-8"?>
<Mission xmlns="Tethys"
xmlns:Guidance="Tethys/Guidance"
xmlns:Units="Tethys/Units"
xmlns:Universal="Tethys/Universal"
xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
xsi:schemaLocation="Tethys http://okeanids.mbari.org/tethys/Xml/Tethys.xsd
Tethys/Guidance http://okeanids.mbari.org/tethys/Xml/Guidance.xsd
Tethys/Units http://okeanids.mbari.org/tethys/Xml/Units.xsd
Tethys/Universal http://okeanids.mbari.org/tethys/Xml/Universal.xsd"
Id="Default">

    <DefineArg Name="ElapsedSinceDefaultStarted"><Units:minute/><Value>0</Value></DefineArg>

    <Guidance:GoToSurface>
        <Progression/>
    </Guidance:GoToSurface>

    <Aggregate Id="CheckIn">

        <Sequence Repeat="288"/>

        <ReadDatum Id="Read_GPS">
            <Sequence/>
            <Timeout Duration="P5M"/>
            <Universal:time_fix/>
        </ReadDatum>

        <ReadDatum Id="Read_Iridium">
            <Sequence/>
            <Timeout Duration="P2H">
                <Guidance:Execute>
                    <Sequence/>
                    <Setting><Guidance:Execute.command/><String>Burn 300</String></Setting>
                </Guidance:Execute>
                <Syslog Severity="Critical">Dropped weight due to communications timeout.</Syslog>
            </Timeout>
            <Universal:platform_communications/>
        </ReadDatum>

        <Guidance:Wait>
            <Sequence/>
            <Setting><Guidance:Wait.duration/><Units:minute/><Value>5</Value></Setting>
        </Guidance:Wait>

        <Assign><Sequence/><Arg Name="ElapsedSinceDefaultStarted"/><Elapsed><Universal:mission_started/></Elapsed></Assign>

        <Syslog Severity="Important">Default mission has been running for <Arg Name="ElapsedSinceDefaultStarted"/><Units:minute/></Syslog>

    </Aggregate>

    <Syslog Severity="Important">Restarting logs and Default mission.</Syslog>

    <Guidance:Execute>
        <Sequence/>
        <Setting><Guidance:Execute.command/><String>restart logs</String></Setting>
    </Guidance:Execute>

</Mission>


2015-09-29T08:03:32.437Z,1443513812.437 [controlThread](DEBUG): Component order: CycleStarter,InternalSim,ISUS,PAR_Licor,AHRS_sp3003D,DataOverHttps,Depth_Keller,DropWeight,DVL_micro,NAL9602,Onboard,DAT,SCPI,PAR_Licor,Depth_Keller,DepthRateCalculator,PitchRateCalculator,SpeedCalculator,TempGradientCalculator,VerticalTemperatureHomogeneityIndexCalculator,YawRateCalculator,StratificationFrontDetector,DeadReckonUsingMultipleVelocitySources,DeadReckonUsingSpeedCalculator,NavChart,UniversalFixResidualReporter,MissionManager,VerticalControl,HorizontalControl,SpeedControl,LoopControl,BuoyancyServo,ElevatorServo,MassServo,RudderServo,ThrusterServo,SBIT,IBIT,CBIT,Reporter,LogSplitter,
2015-09-29T08:03:32.651Z,1443513812.651 [DVL_micro](INFO): Initializing
2015-09-29T08:03:32.820Z,1443513812.820 [DeadReckonUsingMultipleVelocitySources](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T08:03:32.848Z,1443513812.848 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T08:03:32.952Z,1443513812.952 [BuoyancyServo](DEBUG): Initializing BuoyancyServo.
2015-09-29T08:03:32.971Z,1443513812.971 [ElevatorServo](DEBUG): Initializing ElevatorServo.
2015-09-29T08:03:32.977Z,1443513812.977 [MassServo](DEBUG): Initializing MassServo.
2015-09-29T08:03:32.991Z,1443513812.991 [RudderServo](DEBUG): Initializing RudderServo.
2015-09-29T08:03:33.007Z,1443513813.007 [ThrusterServo](DEBUG): Initializing ThrusterServo.
2015-09-29T08:03:33.262Z,1443513813.262 [DeadReckonUsingMultipleVelocitySources](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T08:03:33.277Z,1443513813.277 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T08:03:42.254Z,1443513822.254 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T08:03:42.588Z,1443513822.588 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T08:03:42.727Z,1443513822.727 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T08:03:43.126Z,1443513823.126 [DataOverHttps](INFO): setting available, lastComms_.elapsed()=0.003100
2015-09-29T08:03:43.129Z,1443513823.129 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T08:03:43.525Z,1443513823.525 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T08:03:43.925Z,1443513823.925 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T08:03:44.324Z,1443513824.324 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T08:03:44.724Z,1443513824.724 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T08:03:45.124Z,1443513825.124 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T08:03:45.524Z,1443513825.524 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T08:03:45.923Z,1443513825.923 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T08:03:46.324Z,1443513826.324 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T08:03:46.729Z,1443513826.729 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T08:03:47.127Z,1443513827.127 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T08:03:47.528Z,1443513827.528 [NAL9602](INFO): No messages in MT queue
2015-09-29T08:03:47.529Z,1443513827.529 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T08:03:47.928Z,1443513827.928 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T08:03:48.326Z,1443513828.326 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T08:03:48.729Z,1443513828.729 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T08:03:49.130Z,1443513829.130 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T08:03:49.526Z,1443513829.526 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T08:03:49.926Z,1443513829.926 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T08:03:50.326Z,1443513830.326 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T08:03:50.727Z,1443513830.727 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T08:03:51.129Z,1443513831.129 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T08:03:51.530Z,1443513831.530 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T08:03:51.926Z,1443513831.926 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T08:03:52.324Z,1443513832.324 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T08:03:52.342Z,1443513832.342 [SBIT](IMPORTANT): Beginning Startup BIT
2015-09-29T08:03:52.724Z,1443513832.724 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T08:03:53.124Z,1443513833.124 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T08:03:53.525Z,1443513833.525 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T08:03:53.924Z,1443513833.924 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T08:03:54.324Z,1443513834.324 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T08:03:54.724Z,1443513834.724 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T08:03:55.124Z,1443513835.124 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T08:03:55.525Z,1443513835.525 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T08:03:55.925Z,1443513835.925 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T08:03:56.324Z,1443513836.324 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T08:03:56.724Z,1443513836.724 [D