2015-09-29T07:31:42.302Z,1443511902.302 [Supervisor](DEBUG): Initializing supervisor.
2015-09-29T07:31:42.305Z,1443511902.305 [SyncHandler](DEBUG): Created PCaller Thread at 4034C4E0
2015-09-29T07:31:42.306Z,1443511902.306 [SyncHandler](INFO): Protected caller Thread ID is 761
2015-09-29T07:31:42.306Z,1443511902.306 [ComponentRegistry](DEBUG): Component "controlThread" handled in its own thread.
2015-09-29T07:31:42.308Z,1443511902.308 [controlThread ThreadHandler](DEBUG): Created PCaller Thread at 4037C4E0
2015-09-29T07:31:42.308Z,1443511902.308 [controlThread ThreadHandler](INFO): Protected caller Thread ID is 762
2015-09-29T07:31:42.311Z,1443511902.311 [ComponentRegistry](DEBUG): SyncComponent "CycleStarter" handled in the control thread.
2015-09-29T07:31:42.323Z,1443511902.323 [ComponentRegistry](DEBUG): Component "CommandLine" handled in its own thread.
2015-09-29T07:31:42.328Z,1443511902.328 [CommandLine ThreadHandler](DEBUG): Created PCaller Thread at 403AC4E0
2015-09-29T07:31:42.328Z,1443511902.328 [CommandLine ThreadHandler](INFO): Protected caller Thread ID is 763
2015-09-29T07:31:42.329Z,1443511902.329 [ComponentRegistry](DEBUG): Component "logger" handled in its own thread.
2015-09-29T07:31:42.332Z,1443511902.332 [logger ThreadHandler](DEBUG): Created PCaller Thread at 403DC4E0
2015-09-29T07:31:42.332Z,1443511902.332 [logger ThreadHandler](INFO): Protected caller Thread ID is 764
2015-09-29T07:31:42.334Z,1443511902.334 [ComponentRegistry](DEBUG): SyncComponent "LogSplitter" handled in the control thread.
2015-09-29T07:31:42.335Z,1443511902.335 [Supervisor](INFO): Looking for Config files in directory: Config/
2015-09-29T07:31:42.339Z,1443511902.339 [Supervisor](INFO): Opening Config file at: Config/Control.cfg
2015-09-29T07:31:42.729Z,1443511902.729 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Control
2015-09-29T07:31:42.731Z,1443511902.731 [Supervisor](INFO): Opening Config file at: Config/BIT.cfg
2015-09-29T07:31:42.924Z,1443511902.924 [ComponentRegistry](DEBUG): Loaded Config Component "Config/BIT
2015-09-29T07:31:42.926Z,1443511902.926 [Supervisor](INFO): Opening Config file at: Config/Derivation.cfg
2015-09-29T07:31:43.073Z,1443511903.073 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Derivation
2015-09-29T07:31:43.073Z,1443511903.073 [Supervisor](INFO): Opening Config file at: Config/Estimation.cfg
2015-09-29T07:31:43.221Z,1443511903.221 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Estimation
2015-09-29T07:31:43.221Z,1443511903.221 [Supervisor](INFO): Opening Config file at: Config/Guidance.cfg
2015-09-29T07:31:43.316Z,1443511903.316 [Supervisor](INFO): Opening Config file at: Config/Navigation.cfg
2015-09-29T07:31:43.536Z,1443511903.536 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Navigation
2015-09-29T07:31:43.537Z,1443511903.537 [Supervisor](INFO): Opening Config file at: Config/Sample.cfg
2015-09-29T07:31:43.632Z,1443511903.632 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Sample
2015-09-29T07:31:43.633Z,1443511903.633 [Supervisor](INFO): Opening Config file at: Config/Science.cfg
2015-09-29T07:31:43.949Z,1443511903.949 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Science
2015-09-29T07:31:43.949Z,1443511903.949 [Supervisor](INFO): Opening Config file at: Config/Sensor.cfg
2015-09-29T07:31:44.349Z,1443511904.349 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Sensor
2015-09-29T07:31:44.350Z,1443511904.350 [Supervisor](INFO): Opening Config file at: Config/Servo.cfg
2015-09-29T07:31:44.701Z,1443511904.701 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Servo
2015-09-29T07:31:44.703Z,1443511904.703 [Supervisor](INFO): Opening Config file at: Config/Simulator.cfg
2015-09-29T07:31:45.301Z,1443511905.301 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Simulator
2015-09-29T07:31:45.302Z,1443511905.302 [Supervisor](INFO): Opening Config file at: Config/logger.cfg
2015-09-29T07:31:45.533Z,1443511905.533 [ComponentRegistry](DEBUG): Loaded Config Component "Config/logger
2015-09-29T07:31:45.534Z,1443511905.534 [Supervisor](INFO): Opening Config file at: Config/secure.cfg
2015-09-29T07:31:45.649Z,1443511905.649 [ComponentRegistry](DEBUG): Loaded Config Component "Config/secure
2015-09-29T07:31:45.649Z,1443511905.649 [Supervisor](INFO): Opening Config file at: Config/vehicle.cfg
2015-09-29T07:31:46.166Z,1443511906.166 [ComponentRegistry](DEBUG): Loaded Config Component "Config/vehicle
2015-09-29T07:31:46.166Z,1443511906.166 [Supervisor](INFO): Opening Config file at: Config/workSite.cfg
2015-09-29T07:31:46.337Z,1443511906.337 [ComponentRegistry](DEBUG): Loaded Config Component "Config/workSite
2015-09-29T07:31:46.339Z,1443511906.339 [Supervisor](INFO): Looking for Config files in directory: Config/(none)/
2015-09-29T07:31:46.339Z,1443511906.339 [Supervisor](FAULT): Ignoring configuration overrides from Data/persisted.cfg
2015-09-29T07:31:46.343Z,1443511906.343 [Module Loader](DEBUG): Loading Module at Modules/Control.so
2015-09-29T07:31:46.418Z,1443511906.418 [VerticalControl](DEBUG): Construct VerticalControl.
2015-09-29T07:31:46.552Z,1443511906.552 [VerticalControl] Loaded
2015-09-29T07:31:46.553Z,1443511906.553 [ComponentRegistry](DEBUG): SyncComponent "VerticalControl" handled in the control thread.
2015-09-29T07:31:46.553Z,1443511906.553 [HorizontalControl](DEBUG): Construct HorizontalControl.
2015-09-29T07:31:46.635Z,1443511906.635 [HorizontalControl] Loaded
2015-09-29T07:31:46.635Z,1443511906.635 [ComponentRegistry](DEBUG): SyncComponent "HorizontalControl" handled in the control thread.
2015-09-29T07:31:46.636Z,1443511906.636 [SpeedControl](DEBUG): Construct SpeedControl.
2015-09-29T07:31:46.642Z,1443511906.642 [SpeedControl] Loaded
2015-09-29T07:31:46.642Z,1443511906.642 [ComponentRegistry](DEBUG): SyncComponent "SpeedControl" handled in the control thread.
2015-09-29T07:31:46.643Z,1443511906.643 [LoopControl](DEBUG): Construct LoopControl.
2015-09-29T07:31:46.643Z,1443511906.643 [LoopControl] Loaded
2015-09-29T07:31:46.643Z,1443511906.643 [ComponentRegistry](DEBUG): SyncComponent "LoopControl" handled in the control thread.
2015-09-29T07:31:46.644Z,1443511906.644 [Module Loader](DEBUG): Loaded Module: Control (Contains the Control components, such as Depth, Heading, and Speed Control)
2015-09-29T07:31:46.645Z,1443511906.645 [Module Loader](DEBUG): Loading Module at Modules/BIT.so
2015-09-29T07:31:46.806Z,1443511906.806 [SBIT](DEBUG): Construct Startup Built In Test.
2015-09-29T07:31:46.818Z,1443511906.818 [SBIT] Loaded
2015-09-29T07:31:46.818Z,1443511906.818 [ComponentRegistry](DEBUG): SyncComponent "SBIT" handled in the control thread.
2015-09-29T07:31:46.819Z,1443511906.819 [IBIT](DEBUG): Construct Initiated Built In Test.
2015-09-29T07:31:46.853Z,1443511906.853 [IBIT] Loaded
2015-09-29T07:31:46.853Z,1443511906.853 [ComponentRegistry](DEBUG): SyncComponent "IBIT" handled in the control thread.
2015-09-29T07:31:46.855Z,1443511906.855 [CBIT](DEBUG): Construct Continuous Built In Test.
2015-09-29T07:31:47.011Z,1443511907.011 [CBIT] Loaded
2015-09-29T07:31:47.011Z,1443511907.011 [ComponentRegistry](DEBUG): SyncComponent "CBIT" handled in the control thread.
2015-09-29T07:31:47.012Z,1443511907.012 [Module Loader](DEBUG): Loaded Module: BIT (Contains the BuiltInTest components, such as C Built In Test)
2015-09-29T07:31:47.012Z,1443511907.012 [Module Loader](DEBUG): Loading Module at Modules/Derivation.so
2015-09-29T07:31:47.054Z,1443511907.054 [DepthRateCalculator] Loaded
2015-09-29T07:31:47.054Z,1443511907.054 [ComponentRegistry](DEBUG): SyncComponent "DepthRateCalculator" handled in the control thread.
2015-09-29T07:31:47.059Z,1443511907.059 [PitchRateCalculator] Loaded
2015-09-29T07:31:47.060Z,1443511907.060 [ComponentRegistry](DEBUG): SyncComponent "PitchRateCalculator" handled in the control thread.
2015-09-29T07:31:47.071Z,1443511907.071 [SpeedCalculator] Loaded
2015-09-29T07:31:47.072Z,1443511907.072 [ComponentRegistry](DEBUG): SyncComponent "SpeedCalculator" handled in the control thread.
2015-09-29T07:31:47.093Z,1443511907.093 [TempGradientCalculator] Loaded
2015-09-29T07:31:47.093Z,1443511907.093 [ComponentRegistry](DEBUG): SyncComponent "TempGradientCalculator" handled in the control thread.
2015-09-29T07:31:47.110Z,1443511907.110 [VerticalTemperatureHomogeneityIndexCalculator] Loaded
2015-09-29T07:31:47.111Z,1443511907.111 [ComponentRegistry](DEBUG): SyncComponent "VerticalTemperatureHomogeneityIndexCalculator" handled in the control thread.
2015-09-29T07:31:47.116Z,1443511907.116 [YawRateCalculator] Loaded
2015-09-29T07:31:47.117Z,1443511907.117 [ComponentRegistry](DEBUG): SyncComponent "YawRateCalculator" handled in the control thread.
2015-09-29T07:31:47.117Z,1443511907.117 [Module Loader](DEBUG): Loaded Module: Derivation (Contains the base derivation components)
2015-09-29T07:31:47.118Z,1443511907.118 [Module Loader](DEBUG): Loading Module at Modules/Estimation.so
2015-09-29T07:31:47.241Z,1443511907.241 [StratificationFrontDetector](INFO): threshold set to: 0.399988 degC
2015-09-29T07:31:47.241Z,1443511907.241 [StratificationFrontDetector](DEBUG): (re)initializing
2015-09-29T07:31:47.242Z,1443511907.242 [StratificationFrontDetector] Loaded
2015-09-29T07:31:47.242Z,1443511907.242 [ComponentRegistry](DEBUG): SyncComponent "StratificationFrontDetector" handled in the control thread.
2015-09-29T07:31:47.242Z,1443511907.242 [Module Loader](DEBUG): Loaded Module: Estimation (Contains the base estimation components)
2015-09-29T07:31:47.243Z,1443511907.243 [Module Loader](DEBUG): Loading Module at Modules/Guidance.so
2015-09-29T07:31:47.533Z,1443511907.533 [Module Loader](DEBUG): Loaded Module: Guidance (Contains behaviors and commands)
2015-09-29T07:31:47.534Z,1443511907.534 [Module Loader](DEBUG): Loading Module at Modules/Navigation.so
2015-09-29T07:31:47.667Z,1443511907.667 [DeadReckonUsingMultipleVelocitySources] Loaded
2015-09-29T07:31:47.668Z,1443511907.668 [ComponentRegistry](DEBUG): SyncComponent "DeadReckonUsingMultipleVelocitySources" handled in the control thread.
2015-09-29T07:31:47.733Z,1443511907.733 [DeadReckonUsingSpeedCalculator] Loaded
2015-09-29T07:31:47.733Z,1443511907.733 [ComponentRegistry](DEBUG): SyncComponent "DeadReckonUsingSpeedCalculator" handled in the control thread.
2015-09-29T07:31:47.751Z,1443511907.751 [NavChart] Loaded
2015-09-29T07:31:47.751Z,1443511907.751 [ComponentRegistry](DEBUG): SyncComponent "NavChart" handled in the control thread.
2015-09-29T07:31:47.756Z,1443511907.756 [UniversalFixResidualReporter] Loaded
2015-09-29T07:31:47.757Z,1443511907.757 [ComponentRegistry](DEBUG): SyncComponent "UniversalFixResidualReporter" handled in the control thread.
2015-09-29T07:31:47.757Z,1443511907.757 [Module Loader](DEBUG): Loaded Module: Navigation (Contains the base navigation components)
2015-09-29T07:31:47.758Z,1443511907.758 [Module Loader](DEBUG): Loading Module at Modules/Sample.so
2015-09-29T07:31:47.766Z,1443511907.766 [Module Loader](DEBUG): Loaded Module: Sample (This is a Sample Module of Sample Components)
2015-09-29T07:31:47.767Z,1443511907.767 [Module Loader](DEBUG): Loading Module at Modules/Science.so
2015-09-29T07:31:48.069Z,1443511908.069 [CTD_NeilBrown] Loaded
2015-09-29T07:31:48.070Z,1443511908.070 [ComponentRegistry](DEBUG): Component "CTD_NeilBrown" handled in its own thread.
2015-09-29T07:31:48.072Z,1443511908.072 [CTD_NeilBrown ThreadHandler](DEBUG): Created PCaller Thread at 4059D4E0
2015-09-29T07:31:48.072Z,1443511908.072 [CTD_NeilBrown ThreadHandler](INFO): Protected caller Thread ID is 810
2015-09-29T07:31:48.086Z,1443511908.086 [ISUS] Loaded
2015-09-29T07:31:48.086Z,1443511908.086 [ComponentRegistry](DEBUG): SyncComponent "ISUS" handled in the control thread.
2015-09-29T07:31:48.101Z,1443511908.101 [PAR_Licor] Loaded
2015-09-29T07:31:48.101Z,1443511908.101 [ComponentRegistry](DEBUG): SyncComponent "PAR_Licor" handled in the control thread.
2015-09-29T07:31:48.161Z,1443511908.161 [WetLabsBB2FL] Loaded
2015-09-29T07:31:48.161Z,1443511908.161 [ComponentRegistry](DEBUG): Component "WetLabsBB2FL" handled in its own thread.
2015-09-29T07:31:48.164Z,1443511908.164 [WetLabsBB2FL ThreadHandler](DEBUG): Created PCaller Thread at 405CD4E0
2015-09-29T07:31:48.164Z,1443511908.164 [WetLabsBB2FL ThreadHandler](INFO): Protected caller Thread ID is 811
2015-09-29T07:31:48.165Z,1443511908.165 [Module Loader](DEBUG): Loaded Module: Science (Contains the science components)
2015-09-29T07:31:48.166Z,1443511908.166 [Module Loader](DEBUG): Loading Module at Modules/Sensor.so
2015-09-29T07:31:48.884Z,1443511908.884 [AHRS_sp3003D] Loaded
2015-09-29T07:31:48.884Z,1443511908.884 [ComponentRegistry](DEBUG): SyncComponent "AHRS_sp3003D" handled in the control thread.
2015-09-29T07:31:49.079Z,1443511909.079 [DataOverHttps] Loaded
2015-09-29T07:31:49.079Z,1443511909.079 [ComponentRegistry](DEBUG): SyncComponent "DataOverHttps" handled in the control thread.
2015-09-29T07:31:49.093Z,1443511909.093 [Depth_Keller] Loaded
2015-09-29T07:31:49.093Z,1443511909.093 [ComponentRegistry](DEBUG): SyncComponent "Depth_Keller" handled in the control thread.
2015-09-29T07:31:49.098Z,1443511909.098 [DropWeight] Loaded
2015-09-29T07:31:49.099Z,1443511909.099 [ComponentRegistry](DEBUG): SyncComponent "DropWeight" handled in the control thread.
2015-09-29T07:31:49.256Z,1443511909.256 [DVL_micro] Loaded
2015-09-29T07:31:49.257Z,1443511909.257 [ComponentRegistry](DEBUG): SyncComponent "DVL_micro" handled in the control thread.
2015-09-29T07:31:49.366Z,1443511909.366 [NAL9602] Loaded
2015-09-29T07:31:49.366Z,1443511909.366 [ComponentRegistry](DEBUG): SyncComponent "NAL9602" handled in the control thread.
2015-09-29T07:31:49.413Z,1443511909.413 [Onboard] Loaded
2015-09-29T07:31:49.413Z,1443511909.413 [ComponentRegistry](DEBUG): SyncComponent "Onboard" handled in the control thread.
2015-09-29T07:31:49.425Z,1443511909.425 [Radio_Surface] Loaded
2015-09-29T07:31:49.425Z,1443511909.425 [ComponentRegistry](DEBUG): Component "Radio_Surface" handled in its own thread.
2015-09-29T07:31:49.428Z,1443511909.428 [Radio_Surface ThreadHandler](DEBUG): Created PCaller Thread at 408114E0
2015-09-29T07:31:49.428Z,1443511909.428 [Radio_Surface ThreadHandler](INFO): Protected caller Thread ID is 812
2015-09-29T07:31:49.585Z,1443511909.585 [DAT] Loaded
2015-09-29T07:31:49.585Z,1443511909.585 [ComponentRegistry](DEBUG): SyncComponent "DAT" handled in the control thread.
2015-09-29T07:31:49.596Z,1443511909.596 [SCPI] Loaded
2015-09-29T07:31:49.596Z,1443511909.596 [ComponentRegistry](DEBUG): SyncComponent "SCPI" handled in the control thread.
2015-09-29T07:31:49.597Z,1443511909.597 [Module Loader](DEBUG): Loaded Module: Sensor (Contains the sensor components)
2015-09-29T07:31:49.597Z,1443511909.597 [Module Loader](DEBUG): Loading Module at Modules/Servo.so
2015-09-29T07:31:49.733Z,1443511909.733 [BuoyancyServo] Loaded
2015-09-29T07:31:49.733Z,1443511909.733 [ComponentRegistry](DEBUG): SyncComponent "BuoyancyServo" handled in the control thread.
2015-09-29T07:31:49.746Z,1443511909.746 [ElevatorServo] Loaded
2015-09-29T07:31:49.746Z,1443511909.746 [ComponentRegistry](DEBUG): SyncComponent "ElevatorServo" handled in the control thread.
2015-09-29T07:31:49.758Z,1443511909.758 [MassServo] Loaded
2015-09-29T07:31:49.759Z,1443511909.759 [ComponentRegistry](DEBUG): SyncComponent "MassServo" handled in the control thread.
2015-09-29T07:31:49.771Z,1443511909.771 [RudderServo] Loaded
2015-09-29T07:31:49.771Z,1443511909.771 [ComponentRegistry](DEBUG): SyncComponent "RudderServo" handled in the control thread.
2015-09-29T07:31:49.786Z,1443511909.786 [ThrusterServo] Loaded
2015-09-29T07:31:49.787Z,1443511909.787 [ComponentRegistry](DEBUG): SyncComponent "ThrusterServo" handled in the control thread.
2015-09-29T07:31:49.787Z,1443511909.787 [Module Loader](DEBUG): Loaded Module: Servo (This is the module containing motor controllers)
2015-09-29T07:31:49.788Z,1443511909.788 [Module Loader](DEBUG): Loading Module at Modules/Simulator.so
2015-09-29T07:31:49.987Z,1443511909.987 [InternalSim] Loaded
2015-09-29T07:31:49.988Z,1443511909.988 [ComponentRegistry](DEBUG): SyncComponent "InternalSim" handled in the control thread.
2015-09-29T07:31:49.988Z,1443511909.988 [Module Loader](DEBUG): Loaded Module: Simulator (This is the module containing the Simulator)
2015-09-29T07:31:49.989Z,1443511909.989 [Module Loader](DEBUG): Loading Module at Modules/Trigger.so
2015-09-29T07:31:50.032Z,1443511910.032 [Module Loader](DEBUG): Loaded Module: Trigger (Contains triggers for use in missions)
2015-09-29T07:31:50.036Z,1443511910.036 [ComponentRegistry](DEBUG): SyncComponent "MissionManager" handled in the control thread.
2015-09-29T07:31:50.037Z,1443511910.037 [ComponentRegistry](DEBUG): SyncComponent "Reporter" handled in the control thread.
2015-09-29T07:31:50.044Z,1443511910.044 [ComponentRegistry](DEBUG): Component "NavChartDb" handled in its own thread.
2015-09-29T07:31:50.048Z,1443511910.048 [NavChartDb ThreadHandler](DEBUG): Created PCaller Thread at 408BF4E0
2015-09-29T07:31:50.048Z,1443511910.048 [NavChartDb ThreadHandler](INFO): Protected caller Thread ID is 813
2015-09-29T07:31:50.053Z,1443511910.053 [Supervisor](INFO): Main Thread ID is 760
2015-09-29T07:31:50.053Z,1443511910.053 [Supervisor](DEBUG): Running supervisor.
2015-09-29T07:31:50.054Z,1443511910.054 [CommandLine ThreadHandler](INFO): Handler Thread ID is 814
2015-09-29T07:31:50.060Z,1443511910.060 [controlThread ThreadHandler](INFO): Handler Thread ID is 815
2015-09-29T07:31:50.061Z,1443511910.061 [controlThread](DEBUG): Initializing ControlThread
2015-09-29T07:31:50.062Z,1443511910.062 [VerticalControl](DEBUG): Initialize VerticalControlComponent.
2015-09-29T07:31:50.064Z,1443511910.064 [HorizontalControl](DEBUG): Initialize HorizontalControlComponent.
2015-09-29T07:31:50.064Z,1443511910.064 [SpeedControl](DEBUG): Initialize SpeedControlComponent.
2015-09-29T07:31:50.065Z,1443511910.065 [LoopControl](DEBUG): Initialize LoopControlComponent.
2015-09-29T07:31:50.065Z,1443511910.065 [SBIT](INFO): Initialize SBIT Component.
2015-09-29T07:31:50.066Z,1443511910.066 [SBIT](IMPORTANT): Tethys CM Info: SVN revision:12634
2015-09-29T07:31:50.067Z,1443511910.067 [SBIT](INFO): Kernel Reporting Different Release From Configuration.
Kernel Expected: 2.6.32-45-generic-pae
Kernel Reported: 2.6.27.8
2015-09-29T07:31:50.068Z,1443511910.068 [SBIT](INFO): Kernel Reporting Different Version From Configuration.
Kernel Expected: #102-Ubuntu SMP Wed Jan 2 22:10:16 UTC 2013
Kernel Reported: #641 PREEMPT Mon Sep 28 16:45:10 PDT 2015
2015-09-29T07:31:50.069Z,1443511910.069 [SBIT](INFO): Beginning SBIT in 20.000000 seconds.
2015-09-29T07:31:50.069Z,1443511910.069 [IBIT](INFO): Initialize IBIT Component.
2015-09-29T07:31:50.070Z,1443511910.070 [CBIT](DEBUG): Initialize CBIT Component.
2015-09-29T07:31:50.070Z,1443511910.070 [CBIT](FAULT): LAST RESTART WAS UNINTENTIONAL.
2015-09-29T07:31:50.070Z,1443511910.070 [CBIT](INFO): Last reboot was NOT due to watchdog timer.
2015-09-29T07:31:50.071Z,1443511910.071 [DepthRateCalculator](DEBUG): Initializing DepthRateCalculator.
2015-09-29T07:31:50.071Z,1443511910.071 [PitchRateCalculator](DEBUG): Initializing PitchRateCalculator.
2015-09-29T07:31:50.071Z,1443511910.071 [SpeedCalculator](DEBUG): Initializing SpeedCalculator.
2015-09-29T07:31:50.072Z,1443511910.072 [TempGradientCalculator](DEBUG): Initializing TempGradientCalculator.
2015-09-29T07:31:50.072Z,1443511910.072 [VerticalTemperatureHomogeneityIndexCalculator](DEBUG): (re)initializing
2015-09-29T07:31:50.073Z,1443511910.073 [YawRateCalculator](DEBUG): Initializing YawRateCalculator.
2015-09-29T07:31:50.073Z,1443511910.073 [DeadReckonUsingMultipleVelocitySources](DEBUG): Initializing DeadReckonUsingMultipleVelocitySources component.
2015-09-29T07:31:50.074Z,1443511910.074 [DeadReckonUsingMultipleVelocitySources](INFO): Will consider orientation measurement stale after 120s.
2015-09-29T07:31:50.074Z,1443511910.074 [DeadReckonUsingMultipleVelocitySources](INFO): Will consider velocity measurement stale after 20s.
2015-09-29T07:31:50.075Z,1443511910.075 [DeadReckonUsingSpeedCalculator](DEBUG): Initializing DeadReckonUsingSpeedCalculator component.
2015-09-29T07:31:50.075Z,1443511910.075 [DeadReckonUsingSpeedCalculator](INFO): Will consider orientation measurement stale after 120s.
2015-09-29T07:31:50.076Z,1443511910.076 [DeadReckonUsingSpeedCalculator](INFO): Will consider velocity measurement stale after 20s.
2015-09-29T07:31:50.076Z,1443511910.076 [NavChart](DEBUG): Initialize NavChart Navigation.
2015-09-29T07:31:50.076Z,1443511910.076 [UniversalFixResidualReporter](DEBUG): Initializing UniversalFixResidualReporter component.
2015-09-29T07:31:50.082Z,1443511910.082 [InternalSim](DEBUG):  InternalSim initializing...
2015-09-29T07:31:50.116Z,1443511910.116 [logger ThreadHandler](INFO): Handler Thread ID is 816
2015-09-29T07:31:50.204Z,1443511910.204 [CTD_NeilBrown ThreadHandler](INFO): Handler Thread ID is 817
2015-09-29T07:31:50.213Z,1443511910.213 [WetLabsBB2FL ThreadHandler](INFO): Handler Thread ID is 818
2015-09-29T07:31:50.278Z,1443511910.278 [Radio_Surface ThreadHandler](INFO): Handler Thread ID is 819
2015-09-29T07:31:50.305Z,1443511910.305 [MissionManager](INFO): Loading Mission: Missions/Startup.xml
2015-09-29T07:31:50.325Z,1443511910.325 [NavChartDb ThreadHandler](INFO): Handler Thread ID is 820
2015-09-29T07:31:50.382Z,1443511910.382 [NavChartDb](INFO): Looking for Electronic Nav Chart files in directory: Resources
2015-09-29T07:31:50.384Z,1443511910.384 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US1WC07M.000
2015-09-29T07:31:50.384Z,1443511910.384 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US2WC11M.000
2015-09-29T07:31:50.385Z,1443511910.385 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US3CA52M.000
2015-09-29T07:31:50.385Z,1443511910.385 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US4CA60M.000
2015-09-29T07:31:50.385Z,1443511910.385 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA50M.000
2015-09-29T07:31:50.385Z,1443511910.385 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA61M.000
2015-09-29T07:31:50.386Z,1443511910.386 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA62M.000
2015-09-29T07:31:50.386Z,1443511910.386 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA83M.000
2015-09-29T07:31:50.423Z,1443511910.423 [Startup:A.GoToSurface](DEBUG): Construct GoToSurface.
2015-09-29T07:31:50.456Z,1443511910.456 [MissionManager](DEBUG): 
<?xml version="1.0" encoding="UTF-8"?>
<Mission xmlns="Tethys"
       xmlns:Control="Tethys/Control"
       xmlns:Guidance="Tethys/Guidance" 
       xmlns:Units="Tethys/Units"
       xmlns:Universal="Tethys/Universal"
       xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
       xsi:schemaLocation="Tethys http://okeanids.mbari.org/tethys/Xml/Tethys.xsd
                           Tethys/Control http://okeanids.mbari.org/tethys/Xml/Control.xsd
                           Tethys/Guidance http://okeanids.mbari.org/tethys/Xml/Guidance.xsd
                           Tethys/Units http://okeanids.mbari.org/tethys/Xml/Units.xsd
                           Tethys/Universal http://okeanids.mbari.org/tethys/Xml/Universal.xsd"
       Id="Startup">

    <Guidance:GoToSurface>
        <Progression/>
    </Guidance:GoToSurface>

    <Aggregate Id="StartupSatComms">

        <Sequence/>

        <ReadDatum>
            <Timeout Duration="P1M" />
            <Universal:latitude_fix/>
        </ReadDatum>

        <ReadDatum>
            <Timeout Duration="P1M" />
            <Universal:platform_communications/>
        </ReadDatum>

    </Aggregate>

</Mission>


2015-09-29T07:31:50.457Z,1443511910.457 [MissionManager](INFO): Loading Mission: Missions/Default.xml
2015-09-29T07:31:50.510Z,1443511910.510 [MissionManager](INFO): DefineArg Default.ElapsedSinceDefaultStarted = 0.000000 min
2015-09-29T07:31:50.511Z,1443511910.511 [Default:A.GoToSurface](DEBUG): Construct GoToSurface.
2015-09-29T07:31:50.557Z,1443511910.557 [Default:CheckIn:Read_Iridium:A_Timeout:A.Execute](DEBUG): Construct Execute.
2015-09-29T07:31:50.560Z,1443511910.560 [Default:CheckIn:C.Wait](DEBUG): Construct Wait.
2015-09-29T07:31:50.586Z,1443511910.586 [Default:D.Execute](DEBUG): Construct Execute.
2015-09-29T07:31:50.589Z,1443511910.589 [MissionManager](DEBUG): 
<?xml version="1.0" encoding="UTF-8"?>
<Mission xmlns="Tethys"
xmlns:Guidance="Tethys/Guidance"
xmlns:Units="Tethys/Units"
xmlns:Universal="Tethys/Universal"
xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
xsi:schemaLocation="Tethys http://okeanids.mbari.org/tethys/Xml/Tethys.xsd
Tethys/Guidance http://okeanids.mbari.org/tethys/Xml/Guidance.xsd
Tethys/Units http://okeanids.mbari.org/tethys/Xml/Units.xsd
Tethys/Universal http://okeanids.mbari.org/tethys/Xml/Universal.xsd"
Id="Default">

    <DefineArg Name="ElapsedSinceDefaultStarted"><Units:minute/><Value>0</Value></DefineArg>

    <Guidance:GoToSurface>
        <Progression/>
    </Guidance:GoToSurface>

    <Aggregate Id="CheckIn">

        <Sequence Repeat="288"/>

        <ReadDatum Id="Read_GPS">
            <Sequence/>
            <Timeout Duration="P5M"/>
            <Universal:time_fix/>
        </ReadDatum>

        <ReadDatum Id="Read_Iridium">
            <Sequence/>
            <Timeout Duration="P2H">
                <Guidance:Execute>
                    <Sequence/>
                    <Setting><Guidance:Execute.command/><String>Burn 300</String></Setting>
                </Guidance:Execute>
                <Syslog Severity="Critical">Dropped weight due to communications timeout.</Syslog>
            </Timeout>
            <Universal:platform_communications/>
        </ReadDatum>

        <Guidance:Wait>
            <Sequence/>
            <Setting><Guidance:Wait.duration/><Units:minute/><Value>5</Value></Setting>
        </Guidance:Wait>

        <Assign><Sequence/><Arg Name="ElapsedSinceDefaultStarted"/><Elapsed><Universal:mission_started/></Elapsed></Assign>

        <Syslog Severity="Important">Default mission has been running for <Arg Name="ElapsedSinceDefaultStarted"/><Units:minute/></Syslog>

    </Aggregate>

    <Syslog Severity="Important">Restarting logs and Default mission.</Syslog>

    <Guidance:Execute>
        <Sequence/>
        <Setting><Guidance:Execute.command/><String>restart logs</String></Setting>
    </Guidance:Execute>

</Mission>


2015-09-29T07:31:50.595Z,1443511910.595 [controlThread](DEBUG): Component order: CycleStarter,InternalSim,ISUS,PAR_Licor,AHRS_sp3003D,DataOverHttps,Depth_Keller,DropWeight,DVL_micro,NAL9602,Onboard,DAT,SCPI,PAR_Licor,Depth_Keller,DepthRateCalculator,PitchRateCalculator,SpeedCalculator,TempGradientCalculator,VerticalTemperatureHomogeneityIndexCalculator,YawRateCalculator,StratificationFrontDetector,DeadReckonUsingMultipleVelocitySources,DeadReckonUsingSpeedCalculator,NavChart,UniversalFixResidualReporter,MissionManager,VerticalControl,HorizontalControl,SpeedControl,LoopControl,BuoyancyServo,ElevatorServo,MassServo,RudderServo,ThrusterServo,SBIT,IBIT,CBIT,Reporter,LogSplitter,
2015-09-29T07:31:50.792Z,1443511910.792 [DVL_micro](INFO): Initializing
2015-09-29T07:31:50.968Z,1443511910.968 [DeadReckonUsingMultipleVelocitySources](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T07:31:50.977Z,1443511910.977 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T07:31:51.081Z,1443511911.081 [BuoyancyServo](DEBUG): Initializing BuoyancyServo.
2015-09-29T07:31:51.093Z,1443511911.093 [ElevatorServo](DEBUG): Initializing ElevatorServo.
2015-09-29T07:31:51.112Z,1443511911.112 [MassServo](DEBUG): Initializing MassServo.
2015-09-29T07:31:51.120Z,1443511911.120 [RudderServo](DEBUG): Initializing RudderServo.
2015-09-29T07:31:51.141Z,1443511911.141 [ThrusterServo](DEBUG): Initializing ThrusterServo.
2015-09-29T07:31:51.435Z,1443511911.435 [DeadReckonUsingMultipleVelocitySources](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T07:31:51.441Z,1443511911.441 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2015-09-29T07:32:00.496Z,1443511920.496 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T07:32:00.827Z,1443511920.827 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T07:32:00.954Z,1443511920.954 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T07:32:01.357Z,1443511921.357 [DataOverHttps](INFO): setting available, lastComms_.elapsed()=0.003400
2015-09-29T07:32:01.360Z,1443511921.360 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T07:32:01.753Z,1443511921.753 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T07:32:02.153Z,1443511922.153 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T07:32:02.553Z,1443511922.553 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T07:32:02.953Z,1443511922.953 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T07:32:03.353Z,1443511923.353 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T07:32:03.754Z,1443511923.754 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T07:32:04.152Z,1443511924.152 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T07:32:04.553Z,1443511924.553 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T07:32:04.953Z,1443511924.953 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T07:32:05.352Z,1443511925.352 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T07:32:05.752Z,1443511925.752 [NAL9602](INFO): No messages in MT queue
2015-09-29T07:32:05.753Z,1443511925.753 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T07:32:06.153Z,1443511926.153 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T07:32:06.553Z,1443511926.553 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T07:32:06.952Z,1443511926.952 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T07:32:07.353Z,1443511927.353 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T07:32:07.752Z,1443511927.752 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T07:32:08.152Z,1443511928.152 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T07:32:08.552Z,1443511928.552 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T07:32:08.953Z,1443511928.953 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T07:32:09.352Z,1443511929.352 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T07:32:09.753Z,1443511929.753 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T07:32:10.153Z,1443511930.153 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T07:32:10.552Z,1443511930.552 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T07:32:10.566Z,1443511930.566 [SBIT](IMPORTANT): Beginning Startup BIT
2015-09-29T07:32:10.952Z,1443511930.952 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T07:32:11.354Z,1443511931.354 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T07:32:11.753Z,1443511931.753 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T07:32:12.153Z,1443511932.153 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T07:32:12.553Z,1443511932.553 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T07:32:12.953Z,1443511932.953 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T07:32:13.353Z,1443511933.353 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T07:32:13.754Z,1443511933.754 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T07:32:14.153Z,1443511934.153 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T07:32:14.553Z,1443511934.553 [DAT](ERROR): Could not read simulated DAT measurements from SimSlate.
2015-09-29T07:32:14.954Z,1443511934.954 [D